GCSPB - BACSU - GREMLIN Contacts

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GCSPB - Probable glycine dehydrogenase (decarboxylating) subunit 2

UniProt:	P54377	Sequences: MSNQDQALIFELSREGRIGYSLPELDVPEIELGDLLSDTYIRDEDAALPEVSELDIMRHYTALSKRNHGVDSGFYPLGSCTMKYNPKINEKIARIPGFAAIHPLQDEDTVQGALELLYDLSKHLEEITGMDEVTLQPAAGAHGEWTGLMMIRAYHEARGDFKRTKVIVPDSAHGTNPASATVAGFETVTVKSNEKGLVDLEDLKRAVNEETAALMLTNPNTLGLFEEQITEMAEIVHQAGGKLYYDGANLNAVLSKARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPVGVKQDLIPYLPKPVLVKKEGRFTFDYDRPHAIGRVKPYYGNFGINVRAYTYIRSMGPDGLKAVTENAVLNANYMMRKLAPYYDLPFDRHCKHEFVLSGKRQKKLGVRTLDIAKRLLDFGYHPPTIYFPLNVEECIMIEPTETESKETLDAFIDAMIQIAKEAEENPELVQEAPHTTIVKRMDETKAARHPVLRYEAEER	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	488 (405)
Sequences:	5282 (2842)
Seq/√Len:	141.2

ECOLI - GCSP
BACSU - GCSPB GCSPA
HALSA - GCSPB GCSPA
SULSO - GCSPB GCSPA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
236_V	241_G	3.731	1.00
234_E	238_Q	3.493	1.00
258_R	261_D	3.335	1.00
370_Y	445_I	3.234	1.00
233_A	243_L	3.181	1.00
173_H	221_T	3.159	1.00
131_D	292_K	3.100	1.00
350_K	354_E	3.008	1.00
366_K	441_I	2.902	1.00
248_A	288_P	2.882	1.00
130_M	267_V	2.799	1.00
207_V	235_I	2.757	1.00
363_M	428_P	2.726	1.00
293_Q	296_I	2.696	1.00
115_E	119_D	2.600	1.00
202_D	206_A	2.597	1.00
365_R	368_A	2.532	1.00
257_A	261_D	2.508	1.00
251_N	356_A	2.497	1.00
151_I	266_V	2.360	1.00
230_T	234_E	2.360	1.00
166_V	213_A	2.344	1.00
230_T	257_A	2.241	1.00
407_F	446_Q	2.203	1.00
92_I	339_T	2.197	1.00
254_L	349_L	2.147	1.00
233_A	262_M	2.074	1.00
133_V	290_G	2.024	1.00
165_K	186_E	2.019	1.00
51_V	59_H	2.015	1.00
148_L	215_M	2.011	1.00
249_N	381_H	1.965	1.00
373_L	386_S	1.958	1.00
165_K	208_N	1.952	1.00
387_G	400_I	1.949	1.00
272_H	288_P	1.945	1.00
81_T	431_T	1.944	1.00
366_K	369_P	1.930	1.00
25_L	34_D	1.914	1.00
363_M	437_L	1.910	1.00
165_K	210_E	1.905	1.00
52_S	55_D	1.904	1.00
371_Y	375_F	1.881	1.00
151_I	245_Y	1.830	1.00
118_Y	313_F	1.814	1.00
363_M	441_I	1.810	1.00
363_M	383_F	1.809	1.00
387_G	397_T	1.804	1.00
57_M	87_K	1.777	1.00
84_Y	336_R	1.768	1.00
231_E	234_E	1.756	1.00
79_S	285_G	1.756	1.00
80_C	427_E	1.747	1.00
201_E	204_K	1.727	1.00
132_E	296_I	1.723	1.00
55_D	433_S	1.720	1.00
128_T	269_L	1.718	1.00
191_K	202_D	1.712	1.00
409_Y	443_A	1.703	1.00
214_L	236_V	1.703	1.00
362_Y	434_K	1.701	1.00
355_N	359_N	1.700	1.00
154_Y	295_L	1.698	1.00
166_V	215_M	1.697	1.00
86_P	89_N	1.695	1.00
207_V	211_T	1.681	1.00
234_E	237_H	1.678	1.00
101_I	110_V	1.664	1.00
116_L	335_V	1.643	1.00
434_K	438_D	1.634	1.00
225_F	256_K	1.633	1.00
411_P	440_F	1.627	1.00
359_N	437_L	1.595	1.00
204_K	231_E	1.594	1.00
91_K	339_T	1.587	1.00
131_D	293_Q	1.565	1.00
412_P	425_M	1.558	1.00
384_V	423_C	1.556	1.00
177_P	189_T	1.555	1.00
68_H	73_G	1.552	1.00
193_N	197_L	1.550	1.00
386_S	422_E	1.547	1.00
164_T	186_E	1.545	1.00
242_K	294_D	1.533	1.00
123_H	342_R	1.526	1.00
216_L	229_I	1.522	1.00
364_M	379_C	1.518	1.00
366_K	442_D	1.490	1.00
122_K	125_E	1.484	1.00
71_D	408_G	1.471	1.00
167_I	206_A	1.465	1.00
258_R	262_M	1.457	1.00
116_L	338_Y	1.452	1.00
204_K	235_I	1.452	1.00
171_S	222_L	1.449	1.00
79_S	279_H	1.449	1.00
230_T	262_M	1.444	1.00
360_A	383_F	1.438	1.00
401_A	413_T	1.430	1.00
331_F	335_V	1.418	1.00
202_D	205_R	1.410	1.00
179_S	182_V	1.404	1.00
415_Y	423_C	1.401	1.00
384_V	425_M	1.388	1.00
367_L	444_M	1.375	1.00
220_N	226_E	1.366	1.00
245_Y	264_F	1.361	1.00
105_Q	110_V	1.358	1.00
366_K	445_I	1.354	1.00
125_E	131_D	1.352	1.00
119_D	338_Y	1.350	1.00
125_E	133_V	1.337	1.00
169_P	198_V	1.336	1.00
144_E	215_M	1.333	1.00
344_M	352_V	1.333	1.00
33_G	41_I	1.330	1.00
72_S	436_T	1.328	1.00
245_Y	269_L	1.324	1.00
402_K	406_D	1.323	1.00
172_A	180_A	1.321	1.00
117_L	135_L	1.320	1.00
148_L	166_V	1.317	1.00
291_V	295_L	1.311	1.00
59_H	63_L	1.310	1.00
215_M	247_G	1.308	1.00
277_G	333_I	1.306	1.00
366_K	438_D	1.302	1.00
180_A	187_T	1.301	1.00
164_T	210_E	1.290	1.00
74_F	436_T	1.288	1.00
360_A	428_P	1.280	1.00
165_K	211_T	1.278	1.00
176_N	247_G	1.275	1.00
156_E	161_F	1.275	1.00
153_A	298_Y	1.270	1.00
170_D	189_T	1.269	1.00
113_A	331_F	1.251	1.00
38_D	41_I	1.249	1.00
357_V	361_N	1.246	1.00
361_N	379_C	1.246	1.00
151_I	213_A	1.235	1.00
216_L	243_L	1.231	1.00
201_E	205_R	1.219	1.00
170_D	191_K	1.213	1.00
111_Q	114_L	1.211	1.00
403_R	407_F	1.210	1.00
428_P	432_E	1.205	1.00
209_E	239_A	1.200	1.00
276_T	344_M	1.199	1.00
81_T	429_T	1.196	1.00
180_A	184_G	1.194	1.00
347_D	351_A	1.194	1.00
172_A	217_T	1.193	1.00
120_L	334_N	1.190	1.00
306_K	309_G	1.188	1.00
441_I	445_I	1.183	1.00
236_V	243_L	1.180	1.00
207_V	239_A	1.179	1.00
88_I	339_T	1.177	1.00
179_S	183_A	1.169	1.00
297_P	319_H	1.163	0.99
38_D	43_D	1.158	0.99
81_T	432_E	1.157	0.99
289_V	299_L	1.154	0.99
74_F	409_Y	1.153	0.99
401_A	405_L	1.151	0.99
68_H	408_G	1.147	0.99
61_T	64_S	1.142	0.99
165_K	188_V	1.138	0.99
398_L	413_T	1.136	0.99
88_I	343_S	1.135	0.99
403_R	406_D	1.134	0.99
218_N	256_K	1.132	0.99
338_Y	342_R	1.130	0.99
171_S	220_N	1.127	0.99
83_K	431_T	1.125	0.99
92_I	336_R	1.124	0.99
360_A	379_C	1.114	0.99
218_N	262_M	1.109	0.99
80_C	173_H	1.109	0.99
250_L	272_H	1.107	0.99
147_G	266_V	1.107	0.99
339_T	343_S	1.097	0.99
89_N	276_T	1.093	0.99
409_Y	439_A	1.091	0.99
48_L	51_V	1.088	0.99
237_H	241_G	1.079	0.99
362_Y	438_D	1.077	0.99
432_E	436_T	1.075	0.99
269_L	289_V	1.072	0.99
359_N	434_K	1.072	0.99
99_A	332_G	1.072	0.99
180_A	185_F	1.068	0.99
122_K	126_E	1.067	0.99
375_F	423_C	1.065	0.99
80_C	429_T	1.063	0.99
233_A	237_H	1.056	0.99
105_Q	109_T	1.051	0.99
129_G	258_R	1.050	0.99
162_K	210_E	1.050	0.99
249_N	274_T	1.044	0.99
257_A	262_M	1.041	0.99
124_L	290_G	1.032	0.99
116_L	339_T	1.031	0.99
144_E	176_N	1.026	0.99
364_M	373_L	1.019	0.99
372_D	386_S	1.018	0.99
101_I	113_A	1.017	0.99
250_L	269_L	1.017	0.99
172_A	215_M	1.016	0.99
151_I	242_K	1.015	0.99
118_Y	121_S	1.013	0.99
61_T	65_K	1.008	0.99
138_A	325_K	1.002	0.98
426_I	440_F	1.002	0.98
368_A	373_L	0.998	0.98
237_H	243_L	0.988	0.98
200_L	204_K	0.987	0.98
227_E	230_T	0.987	0.98
168_V	172_A	0.986	0.98
407_F	439_A	0.984	0.98
181_T	184_G	0.981	0.98
87_K	343_S	0.980	0.98
121_S	132_E	0.974	0.98
153_A	156_E	0.972	0.98
255_S	357_V	0.968	0.98
77_L	173_H	0.965	0.98
286_S	334_N	0.964	0.98
216_L	233_A	0.963	0.98
107_E	328_Y	0.954	0.98
364_M	368_A	0.954	0.98
397_T	401_A	0.952	0.98
356_A	381_H	0.951	0.98
131_D	291_V	0.950	0.98
351_A	354_E	0.949	0.98
246_D	262_M	0.942	0.98
163_R	240_G	0.936	0.98
119_D	123_H	0.933	0.98
65_K	72_S	0.926	0.97
229_I	262_M	0.924	0.97
386_S	423_C	0.923	0.97
375_F	386_S	0.922	0.97
372_D	375_F	0.921	0.97
385_L	426_I	0.920	0.97
131_D	296_I	0.918	0.97
82_M	279_H	0.917	0.97
123_H	341_I	0.915	0.97
396_R	399_D	0.912	0.97
233_A	246_D	0.910	0.97
59_H	62_A	0.907	0.97
351_A	355_N	0.906	0.97
220_N	224_L	0.904	0.97
182_V	185_F	0.903	0.97
407_F	443_A	0.901	0.97
150_M	321_I	0.896	0.97
248_A	272_H	0.896	0.97
213_A	245_Y	0.896	0.97
414_I	425_M	0.896	0.97
217_T	247_G	0.895	0.97
208_N	211_T	0.895	0.97
68_H	71_D	0.893	0.97
286_S	337_A	0.890	0.97
155_H	163_R	0.888	0.97
182_V	187_T	0.886	0.97
134_T	289_V	0.881	0.97
204_K	238_Q	0.879	0.97
439_A	443_A	0.876	0.96
167_I	211_T	0.875	0.96
401_A	424_I	0.872	0.96
357_V	379_C	0.871	0.96
117_L	286_S	0.865	0.96
301_K	316_D	0.864	0.96
134_T	146_T	0.859	0.96
131_D	294_D	0.858	0.96
74_F	432_E	0.858	0.96
301_K	320_A	0.856	0.96
442_D	445_I	0.854	0.96
180_A	183_A	0.854	0.96
36_L	41_I	0.852	0.96
314_D	317_R	0.852	0.96
119_D	342_R	0.852	0.96
347_D	354_E	0.851	0.96
42_R	45_D	0.849	0.96
397_T	414_I	0.849	0.96
71_D	405_L	0.847	0.96
218_N	252_A	0.847	0.96
150_M	291_V	0.847	0.96
248_A	252_A	0.846	0.96
371_Y	400_I	0.841	0.96
214_L	232_M	0.840	0.96
256_K	354_E	0.839	0.95
208_N	239_A	0.838	0.95
72_S	439_A	0.838	0.95
333_I	336_R	0.837	0.95
125_E	130_M	0.833	0.95
388_K	397_T	0.833	0.95
167_I	190_V	0.827	0.95
367_L	385_L	0.827	0.95
199_D	202_D	0.825	0.95
81_T	279_H	0.825	0.95
26_D	31_E	0.823	0.95
151_I	166_V	0.823	0.95
340_Y	352_V	0.822	0.95
150_M	289_V	0.822	0.95
132_E	303_V	0.821	0.95
77_L	221_T	0.821	0.95
55_D	435_E	0.819	0.95
409_Y	440_F	0.818	0.95
404_L	411_P	0.808	0.94
270_N	288_P	0.808	0.94
150_M	154_Y	0.807	0.94
409_Y	436_T	0.807	0.94
399_D	402_K	0.806	0.94
117_L	328_Y	0.805	0.94
398_L	402_K	0.804	0.94
360_A	427_E	0.804	0.94
197_L	377_R	0.801	0.94
440_F	444_M	0.800	0.94
104_L	327_Y	0.800	0.94
218_N	225_F	0.799	0.94
292_K	295_L	0.798	0.94
272_H	286_S	0.795	0.94
163_R	212_A	0.794	0.94
235_I	239_A	0.792	0.94
54_L	83_K	0.792	0.94
250_L	254_L	0.792	0.94
73_G	279_H	0.790	0.94
130_M	260_G	0.788	0.94
303_V	323_R	0.787	0.94
120_L	272_H	0.787	0.94
341_I	349_L	0.785	0.94
389_R	422_E	0.784	0.94
359_N	428_P	0.784	0.94
77_L	425_M	0.783	0.94
184_G	187_T	0.783	0.94
155_H	212_A	0.783	0.94
133_V	289_V	0.782	0.93
130_M	264_F	0.781	0.93
22_L	25_L	0.779	0.93
42_R	46_A	0.776	0.93
127_I	341_I	0.775	0.93
152_R	212_A	0.773	0.93
279_H	285_G	0.767	0.93
152_R	164_T	0.765	0.93
385_L	444_M	0.765	0.93
245_Y	262_M	0.765	0.93
226_E	229_I	0.761	0.93
322_G	325_K	0.760	0.92
276_T	333_I	0.759	0.92
127_I	349_L	0.758	0.92
56_I	60_Y	0.756	0.92
44_E	47_A	0.755	0.92
396_R	422_E	0.754	0.92
224_L	377_R	0.754	0.92
104_L	302_P	0.745	0.92
231_E	235_I	0.745	0.92
110_V	114_L	0.744	0.92
403_R	447_I	0.743	0.92
227_E	231_E	0.743	0.92
235_I	238_Q	0.742	0.92
74_F	428_P	0.742	0.92
186_E	191_K	0.739	0.91
124_L	272_H	0.738	0.91
404_L	409_Y	0.738	0.91
352_V	356_A	0.737	0.91
340_Y	344_M	0.735	0.91
51_V	56_I	0.734	0.91
363_M	367_L	0.734	0.91
301_K	319_H	0.733	0.91
254_L	352_V	0.730	0.91
407_F	442_D	0.730	0.91
110_V	328_Y	0.729	0.91
373_L	385_L	0.729	0.91
204_K	208_N	0.727	0.91
371_Y	444_M	0.727	0.91
246_D	264_F	0.724	0.91
396_R	400_I	0.723	0.90
170_D	192_S	0.722	0.90
172_A	177_P	0.722	0.90
415_Y	422_E	0.722	0.90
363_M	440_F	0.721	0.90
74_F	440_F	0.721	0.90
438_D	442_D	0.718	0.90
379_C	383_F	0.716	0.90
372_D	385_L	0.716	0.90
246_D	258_R	0.714	0.90
62_A	65_K	0.713	0.90
179_S	185_F	0.713	0.90
64_S	71_D	0.712	0.90
190_V	206_A	0.712	0.90
435_E	438_D	0.712	0.90
166_V	212_A	0.710	0.90
121_S	303_V	0.709	0.90
146_T	324_V	0.709	0.90
358_L	362_Y	0.707	0.90
242_K	295_L	0.707	0.90
126_E	258_R	0.707	0.90
176_N	217_T	0.706	0.89
302_P	327_Y	0.706	0.89
120_L	286_S	0.704	0.89
134_T	299_L	0.702	0.89
438_D	441_I	0.701	0.89
95_I	98_F	0.701	0.89
79_S	142_H	0.701	0.89
410_H	413_T	0.701	0.89
229_I	246_D	0.698	0.89
126_E	346_P	0.697	0.89
431_T	436_T	0.696	0.89
111_Q	118_Y	0.694	0.89
107_E	114_L	0.694	0.89
291_V	299_L	0.693	0.89
237_H	242_K	0.693	0.89
277_G	336_R	0.691	0.88
433_S	436_T	0.688	0.88
101_I	105_Q	0.688	0.88
272_H	275_F	0.688	0.88
154_Y	298_Y	0.687	0.88
435_E	439_A	0.685	0.88
405_L	411_P	0.682	0.88
307_K	310_R	0.679	0.88
245_Y	253_V	0.677	0.87
182_V	186_E	0.674	0.87
91_K	94_R	0.673	0.87
171_S	224_L	0.672	0.87
114_L	118_Y	0.670	0.87
200_L	203_L	0.669	0.87
96_P	99_A	0.668	0.87
83_K	86_P	0.667	0.87
400_I	444_M	0.666	0.87
182_V	191_K	0.665	0.86
197_L	200_L	0.664	0.86
148_L	179_S	0.658	0.86
301_K	306_K	0.658	0.86
197_L	224_L	0.657	0.86
33_G	38_D	0.657	0.86
301_K	317_R	0.656	0.86
185_F	213_A	0.655	0.86
370_Y	441_I	0.655	0.86
107_E	121_S	0.652	0.85
298_Y	319_H	0.652	0.85
93_A	336_R	0.648	0.85
121_S	135_L	0.647	0.85
398_L	414_I	0.647	0.85
207_V	236_V	0.646	0.85
383_F	426_I	0.645	0.85
302_P	323_R	0.645	0.85
130_M	290_G	0.644	0.85
151_I	155_H	0.643	0.85
354_E	358_L	0.643	0.85
271_L	288_P	0.643	0.85
246_D	267_V	0.641	0.84
171_S	198_V	0.638	0.84
301_K	318_P	0.636	0.84
229_I	233_A	0.636	0.84
374_P	386_S	0.636	0.84
388_K	422_E	0.635	0.84
73_G	81_T	0.635	0.84
432_E	437_L	0.634	0.84
213_A	241_G	0.634	0.84
359_N	362_Y	0.632	0.84
371_Y	374_P	0.631	0.83
154_Y	292_K	0.631	0.83
193_N	199_D	0.631	0.83
255_S	353_T	0.628	0.83
167_I	201_E	0.628	0.83
363_M	426_I	0.624	0.83
255_S	354_E	0.624	0.83
84_Y	89_N	0.623	0.83
389_R	399_D	0.623	0.83
346_P	349_L	0.622	0.83
137_P	289_V	0.621	0.82
185_F	189_T	0.615	0.82
305_V	311_F	0.613	0.82
168_V	215_M	0.612	0.82
186_E	189_T	0.611	0.81
369_P	445_I	0.611	0.81
36_L	39_T	0.610	0.81
152_R	156_E	0.608	0.81
301_K	315_Y	0.608	0.81
89_N	336_R	0.607	0.81
195_K	227_E	0.606	0.81
90_E	94_R	0.605	0.81
397_T	415_Y	0.604	0.81
124_L	134_T	0.603	0.81
58_R	83_K	0.602	0.81
428_P	437_L	0.602	0.81
346_P	350_K	0.601	0.80
221_T	412_P	0.600	0.80
414_I	422_E	0.598	0.80
153_A	321_I	0.598	0.80
121_S	328_Y	0.597	0.80
411_P	425_M	0.596	0.80
154_Y	242_K	0.593	0.80
366_K	370_Y	0.593	0.80
144_E	247_G	0.591	0.79
154_Y	291_V	0.590	0.79
403_R	446_Q	0.590	0.79
92_I	116_L	0.590	0.79
77_L	412_P	0.588	0.79
25_L	31_E	0.588	0.79
254_L	353_T	0.586	0.79
150_M	266_V	0.586	0.79
116_L	331_F	0.585	0.79
251_N	254_L	0.585	0.79
271_L	287_G	0.584	0.79
104_L	328_Y	0.578	0.78
152_R	185_F	0.577	0.78
200_L	235_I	0.577	0.78
248_A	267_V	0.577	0.78
92_I	335_V	0.576	0.78
70_V	73_G	0.574	0.77
339_T	342_R	0.572	0.77
165_K	193_N	0.571	0.77
315_Y	320_A	0.571	0.77
251_N	340_Y	0.570	0.77
88_I	92_I	0.568	0.77
370_Y	446_Q	0.568	0.77
253_V	259_P	0.568	0.77
137_P	287_G	0.566	0.76
253_V	262_M	0.565	0.76
211_T	235_I	0.563	0.76
297_P	318_P	0.561	0.76
189_T	192_S	0.561	0.76
198_V	203_L	0.560	0.76
442_D	446_Q	0.558	0.75
330_N	333_I	0.558	0.75
303_V	317_R	0.558	0.75
21_S	26_D	0.558	0.75
320_A	323_R	0.556	0.75
383_F	428_P	0.555	0.75
107_E	111_Q	0.555	0.75
266_V	298_Y	0.553	0.75
77_L	427_E	0.553	0.75
277_G	337_A	0.553	0.75
426_I	444_M	0.546	0.74
114_L	304_L	0.546	0.74
114_L	328_Y	0.545	0.74
31_E	35_L	0.545	0.74
166_V	245_Y	0.545	0.74
397_T	400_I	0.544	0.73
37_S	40_Y	0.544	0.73
179_S	184_G	0.543	0.73
275_F	356_A	0.542	0.73
356_A	360_A	0.542	0.73
117_L	334_N	0.542	0.73
306_K	311_F	0.542	0.73
155_H	242_K	0.541	0.73
413_T	422_E	0.541	0.73
41_I	44_E	0.541	0.73
116_L	334_N	0.540	0.73
243_L	264_F	0.540	0.73
29_E	41_I	0.540	0.73
365_R	369_P	0.539	0.73
155_H	240_G	0.538	0.73
225_F	357_V	0.538	0.73
77_L	174_G	0.537	0.73
222_L	384_V	0.537	0.73
149_M	153_A	0.537	0.73
428_P	431_T	0.536	0.72
364_M	374_P	0.536	0.72
127_I	250_L	0.536	0.72
301_K	323_R	0.536	0.72
132_E	299_L	0.531	0.72
73_G	76_P	0.531	0.72
364_M	383_F	0.529	0.71
344_M	349_L	0.527	0.71
77_L	80_C	0.526	0.71
167_I	188_V	0.525	0.71
148_L	187_T	0.524	0.71
179_S	187_T	0.524	0.71
176_N	215_M	0.523	0.71
361_N	365_R	0.523	0.71
123_H	338_Y	0.523	0.71
251_N	275_F	0.522	0.70
397_T	424_I	0.522	0.70
224_L	376_D	0.521	0.70
33_G	36_L	0.520	0.70
368_A	377_R	0.520	0.70
167_I	236_V	0.518	0.70
31_E	34_D	0.516	0.70
21_S	25_L	0.516	0.70
172_A	221_T	0.515	0.69
216_L	232_M	0.515	0.69
107_E	110_V	0.515	0.69
306_K	319_H	0.515	0.69
121_S	321_I	0.514	0.69
361_N	364_M	0.513	0.69
264_F	267_V	0.513	0.69
387_G	396_R	0.512	0.69
123_H	275_F	0.512	0.69
347_D	350_K	0.512	0.69
106_D	376_D	0.512	0.69
118_Y	122_K	0.511	0.69
220_N	384_V	0.510	0.69
188_V	206_A	0.510	0.69
169_P	202_D	0.510	0.69
258_R	267_V	0.509	0.69
105_Q	111_Q	0.509	0.69
266_V	289_V	0.507	0.68
400_I	440_F	0.507	0.68
121_S	319_H	0.505	0.68
147_G	245_Y	0.504	0.68
256_K	350_K	0.504	0.68
401_A	411_P	0.503	0.68
277_G	280_G	0.503	0.68
274_T	381_H	0.502	0.67
32_L	35_L	0.501	0.67
107_E	319_H	0.500	0.67

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4lhdA	2	0.9344	100	0.535	Contact Map
1wyuB	2	0.9631	100	0.622	Contact Map
1wyuA	2	0.8545	100	0.639	Contact Map
3mc6A	2	0.8238	100	0.759	Contact Map
3wcnA	2	0.8238	100	0.785	Contact Map
3hl2A	3	0.7971	100	0.799	Contact Map
2z67A	4	0.7889	100	0.804	Contact Map
3bc8A	3	0.7828	100	0.806	Contact Map
4obuE	2	0.8607	100	0.822	Contact Map
2jisA	2	0.8566	100	0.828	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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