GCSPA - BACSU - GREMLIN Contacts

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GCSPA - Probable glycine dehydrogenase (decarboxylating) subunit 1

UniProt:	P54376	Sequences: MKHRYLPATEKDKQEMLATIGVSSIDDLFADIPENVKYKKEHQIKKAKSETELTRELTKLASKNRDTVQYASFLGAGVYDHYQPVIVDHVISRSEFYTAYTPYQPEISQGELQAIFEFQTMICELTGMDIANSSMYDGGTALAEAAMLASGHTKKKKIVVSKTVHPESREVLKTYAKGQYIDVVEVPAADGVTDLDALRQTVCENTAAVIVQYPNFFGRIEPLKDIEPIAHQGKSMFIVSANPLALGLLTPPGKFQSDIVVGDAQPFGIPSAYGGPHCGFFAVTKKLMRKVPGRLVGQTEDENGKRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKNGVKDIARQNLLKANYAKQEAKKAGLTVMFDGPMFNEFVIKLDEPVRAVNKRLLAKGMIGGYDLGLTYPELDCHMLIAVTELRTKEEIDALIQELGDRHE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	448 (397)
Sequences:	5172 (2739)
Seq/√Len:	137.5

ECOLI - GCSP
BACSU - GCSPA GCSPB
HALSA - GCSPA GCSPB
SULSO - GCSPA GCSPB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
228_P	232_Q	3.515	1.00
251_P	254_K	3.379	1.00
372_A	444_G	3.250	1.00
129_D	284_T	3.105	1.00
165_H	216_F	3.006	1.00
352_K	356_R	3.002	1.00
90_V	341_V	2.968	1.00
375_T	389_K	2.940	1.00
368_E	440_I	2.842	1.00
128_M	260_V	2.790	1.00
149_A	290_K	2.736	1.00
241_A	280_F	2.735	1.00
157_K	182_D	2.694	1.00
365_A	427_V	2.625	1.00
367_Q	370_K	2.605	1.00
285_K	288_M	2.568	1.00
113_Q	117_E	2.564	1.00
230_A	235_S	2.524	1.00
244_L	358_N	2.428	1.00
65_R	70_Y	2.348	1.00
250_T	254_K	2.321	1.00
224_K	228_P	2.314	1.00
158_I	208_A	2.308	1.00
54_T	85_V	2.245	1.00
169_R	185_E	2.200	1.00
227_E	237_F	2.156	1.00
224_K	250_T	2.131	1.00
247_G	351_V	2.116	1.00
202_V	229_I	2.059	1.00
160_V	172_L	2.018	1.00
227_E	255_F	2.016	1.00
159_V	186_V	1.995	1.00
131_A	282_A	1.988	1.00
187_P	190_D	1.960	1.00
164_V	169_R	1.955	1.00
48_K	56_E	1.946	1.00
366_K	376_V	1.943	1.00
157_K	203_C	1.931	1.00
242_N	384_N	1.930	1.00
146_A	210_I	1.920	1.00
71_A	435_E	1.894	1.00
80_D	430_L	1.892	1.00
49_S	52_E	1.886	1.00
296_V	310_L	1.854	1.00
368_E	371_K	1.841	1.00
365_A	436_I	1.838	1.00
365_A	386_F	1.827	1.00
264_A	280_F	1.813	1.00
34_E	39_K	1.807	1.00
157_K	205_N	1.791	1.00
130_I	288_M	1.787	1.00
365_A	440_I	1.755	1.00
52_E	432_T	1.730	1.00
211_V	223_L	1.705	1.00
114_A	337_L	1.693	1.00
225_D	228_P	1.684	1.00
78_V	277_H	1.684	1.00
34_E	37_K	1.683	1.00
79_Y	426_A	1.678	1.00
433_K	437_D	1.674	1.00
83_Q	338_A	1.670	1.00
126_T	261_V	1.665	1.00
209_V	230_A	1.664	1.00
116_F	308_F	1.663	1.00
33_P	36_V	1.643	1.00
364_Y	433_K	1.642	1.00
129_D	285_K	1.642	1.00
196_D	199_R	1.641	1.00
149_A	317_Q	1.629	1.00
158_I	210_I	1.628	1.00
228_P	231_H	1.620	1.00
100_Y	108_S	1.618	1.00
199_R	225_D	1.612	1.00
357_Q	361_K	1.597	1.00
121_M	344_T	1.593	1.00
86_I	345_A	1.553	1.00
116_F	298_Q	1.546	1.00
366_K	382_M	1.536	1.00
220_I	249_L	1.534	1.00
157_K	184_V	1.523	1.00
387_V	422_H	1.520	1.00
156_K	180_Y	1.516	1.00
368_E	441_Q	1.497	1.00
162_K	187_P	1.490	1.00
149_A	238_I	1.487	1.00
361_K	436_I	1.478	1.00
78_V	271_S	1.474	1.00
199_R	229_I	1.464	1.00
114_A	340_S	1.464	1.00
389_K	421_C	1.463	1.00
70_Y	405_G	1.459	1.00
33_P	38_Y	1.451	1.00
120_T	123_C	1.449	1.00
202_V	206_T	1.443	1.00
224_K	255_F	1.436	1.00
172_L	183_V	1.433	1.00
362_A	386_F	1.430	1.00
333_A	337_L	1.427	1.00
163_T	217_F	1.427	1.00
147_M	150_S	1.425	1.00
62_S	69_Q	1.422	1.00
251_P	255_F	1.419	1.00
387_V	424_L	1.404	1.00
238_I	257_S	1.393	1.00
73_F	435_E	1.390	1.00
346_L	354_I	1.377	1.00
27_D	31_D	1.366	1.00
211_V	237_F	1.363	1.00
376_V	388_I	1.354	1.00
91_I	338_A	1.348	1.00
369_A	443_L	1.347	1.00
222_P	225_D	1.347	1.00
215_N	221_E	1.344	1.00
156_K	205_N	1.344	1.00
162_K	185_E	1.344	1.00
283_V	287_L	1.339	1.00
210_I	240_S	1.336	1.00
104_Q	108_S	1.336	1.00
238_I	261_V	1.333	1.00
117_E	340_S	1.327	1.00
406_M	442_E	1.326	1.00
412_L	439_L	1.324	1.00
146_A	158_I	1.324	1.00
269_I	335_N	1.321	1.00
115_I	133_S	1.313	1.00
169_R	173_K	1.313	1.00
123_C	131_A	1.308	1.00
368_E	437_D	1.300	1.00
377_M	389_K	1.295	1.00
123_C	129_D	1.288	1.00
111_E	333_A	1.284	1.00
377_M	422_H	1.284	1.00
368_E	444_G	1.277	1.00
109_Q	112_L	1.277	1.00
398_N	414_L	1.270	1.00
157_K	206_T	1.269	1.00
362_A	427_V	1.264	1.00
56_E	60_L	1.261	1.00
187_P	192_V	1.259	1.00
161_S	193_T	1.256	1.00
363_N	382_M	1.255	1.00
118_F	336_A	1.245	1.00
168_S	240_S	1.240	1.00
164_V	212_Q	1.227	1.00
413_G	424_L	1.220	1.00
359_L	363_N	1.219	1.00
80_D	428_T	1.202	1.00
398_N	402_L	1.200	1.00
268_G	346_L	1.198	1.00
143_A	259_I	1.194	1.00
58_T	61_A	1.185	1.00
87_V	268_G	1.180	0.99
33_P	39_K	1.178	0.99
27_D	30_A	1.169	0.99
145_A	148_L	1.169	0.99
427_V	431_R	1.168	0.99
30_A	37_K	1.167	0.99
235_S	286_K	1.163	0.99
152_H	155_K	1.156	0.99
362_A	382_M	1.147	0.99
341_V	345_A	1.144	0.99
80_D	431_R	1.142	0.99
33_P	37_K	1.139	0.99
84_P	87_V	1.124	0.99
82_Y	430_L	1.119	0.99
281_F	291_V	1.118	0.99
159_V	201_T	1.114	0.99
154_K	205_N	1.112	0.99
340_S	344_T	1.111	0.99
213_Y	249_L	1.109	0.99
364_Y	437_D	1.108	0.99
349_N	353_D	1.107	0.99
261_V	281_F	1.106	0.99
230_A	237_F	1.105	0.99
213_Y	255_F	1.105	0.99
120_T	124_E	1.101	0.99
227_E	236_M	1.101	0.99
34_E	38_Y	1.101	0.99
390_L	394_V	1.093	0.99
71_A	438_A	1.092	0.99
127_G	251_P	1.085	0.99
361_K	433_K	1.082	0.99
100_Y	111_E	1.081	0.99
79_Y	165_H	1.075	0.99
243_P	264_A	1.073	0.99
104_Q	107_I	1.071	0.99
79_Y	428_T	1.068	0.99
65_R	405_G	1.057	0.99
404_K	441_Q	1.056	0.99
116_F	119_Q	1.054	0.99
163_T	215_N	1.047	0.99
147_M	152_H	1.045	0.99
374_L	388_I	1.043	0.99
404_K	438_A	1.042	0.99
242_N	266_P	1.037	0.99
151_G	290_K	1.029	0.99
76_A	165_H	1.028	0.99
199_R	232_Q	1.026	0.99
45_K	48_K	1.024	0.99
388_I	425_I	1.024	0.99
142_L	210_I	1.024	0.99
250_T	255_F	1.023	0.99
353_D	356_R	1.022	0.99
58_T	62_S	1.021	0.99
227_E	231_H	1.020	0.99
440_I	444_G	1.018	0.99
122_I	282_A	1.016	0.98
431_R	435_E	1.015	0.98
374_L	443_L	1.015	0.98
144_E	148_L	1.014	0.98
239_V	255_F	1.005	0.98
425_I	439_L	1.004	0.98
129_D	283_V	1.004	0.98
159_V	184_V	1.003	0.98
172_L	210_I	1.002	0.98
114_A	341_V	0.991	0.98
119_Q	130_I	0.987	0.98
164_V	210_I	0.983	0.98
73_F	406_M	0.968	0.98
142_L	172_L	0.968	0.98
211_V	227_E	0.967	0.98
278_C	336_A	0.967	0.98
243_P	261_V	0.962	0.98
223_L	255_F	0.962	0.98
97_Y	334_L	0.961	0.98
117_E	121_M	0.960	0.98
393_P	396_A	0.956	0.98
390_L	402_L	0.953	0.98
395_R	414_L	0.953	0.98
227_E	239_V	0.950	0.98
248_L	359_L	0.948	0.98
392_E	396_A	0.947	0.98
438_A	442_E	0.945	0.98
72_S	271_S	0.944	0.98
353_D	357_Q	0.943	0.98
389_K	422_H	0.942	0.98
86_I	341_V	0.941	0.98
215_N	219_R	0.936	0.97
129_D	288_M	0.936	0.97
117_E	344_T	0.935	0.97
358_N	384_N	0.933	0.97
160_V	164_V	0.930	0.97
29_F	32_I	0.929	0.97
366_K	370_K	0.924	0.97
231_H	237_F	0.924	0.97
191_G	378_F	0.921	0.97
121_M	343_M	0.913	0.97
56_E	59_K	0.913	0.97
81_H	271_S	0.904	0.97
212_Q	240_S	0.904	0.97
132_N	281_F	0.903	0.97
394_V	398_N	0.902	0.97
441_Q	444_G	0.901	0.97
129_D	286_K	0.901	0.97
249_L	356_R	0.899	0.97
147_M	179_Q	0.895	0.97
203_C	206_T	0.894	0.97
268_G	335_N	0.892	0.97
335_N	338_A	0.892	0.97
103_Y	329_C	0.891	0.97
76_A	216_F	0.890	0.97
289_R	317_Q	0.890	0.97
400_R	403_A	0.889	0.96
149_A	208_A	0.886	0.96
70_Y	402_L	0.884	0.96
108_S	112_L	0.880	0.96
278_C	339_A	0.879	0.96
148_L	153_T	0.879	0.96
370_K	376_V	0.878	0.96
241_A	264_A	0.878	0.96
115_I	278_C	0.877	0.96
149_A	236_M	0.876	0.96
94_S	97_Y	0.868	0.96
115_I	330_S	0.865	0.96
209_V	226_I	0.865	0.96
241_A	245_A	0.865	0.96
399_K	403_A	0.859	0.96
80_D	271_S	0.858	0.96
359_L	382_M	0.856	0.96
208_A	238_I	0.853	0.96
32_I	37_K	0.850	0.95
52_E	434_E	0.848	0.95
213_Y	245_A	0.847	0.95
439_L	443_L	0.847	0.95
38_Y	42_H	0.846	0.95
342_A	354_I	0.845	0.95
155_K	207_A	0.845	0.95
204_E	233_G	0.843	0.95
195_L	222_P	0.843	0.95
362_A	426_A	0.840	0.95
398_N	423_M	0.840	0.95
156_K	182_D	0.836	0.95
142_L	168_S	0.834	0.95
243_P	247_G	0.833	0.95
149_A	259_I	0.832	0.95
391_D	394_V	0.829	0.95
404_K	442_E	0.828	0.95
392_E	395_R	0.824	0.95
262_G	280_F	0.822	0.95
437_D	440_I	0.820	0.95
73_F	431_R	0.820	0.95
293_G	321_R	0.818	0.94
128_M	253_G	0.817	0.94
136_Y	323_K	0.815	0.94
146_A	172_L	0.815	0.94
401_L	406_M	0.810	0.94
284_T	287_L	0.808	0.94
219_R	380_G	0.808	0.94
294_R	329_C	0.807	0.94
369_A	388_I	0.807	0.94
213_Y	220_I	0.805	0.94
195_L	229_I	0.804	0.94
159_V	206_T	0.803	0.94
123_C	128_M	0.803	0.94
392_E	397_V	0.799	0.94
142_L	281_F	0.799	0.94
76_A	424_L	0.798	0.94
311_T	315_R	0.798	0.94
247_G	354_I	0.797	0.94
88_D	338_A	0.795	0.94
112_L	116_F	0.795	0.94
295_L	324_A	0.795	0.94
377_M	387_V	0.793	0.93
148_L	283_V	0.792	0.93
264_A	278_C	0.791	0.93
36_V	39_K	0.791	0.93
128_M	257_S	0.788	0.93
298_Q	306_R	0.788	0.93
392_E	421_C	0.783	0.93
369_A	374_L	0.781	0.93
118_F	264_A	0.781	0.93
361_K	427_V	0.781	0.93
349_N	356_R	0.780	0.93
131_A	281_F	0.779	0.93
59_K	62_S	0.779	0.93
238_I	255_F	0.776	0.93
53_L	57_L	0.772	0.93
238_I	246_L	0.772	0.93
124_E	251_P	0.771	0.92
147_M	181_I	0.771	0.92
343_M	351_V	0.771	0.92
437_D	441_Q	0.770	0.92
342_A	346_L	0.768	0.92
103_Y	294_R	0.768	0.92
271_S	277_H	0.764	0.92
38_Y	41_E	0.763	0.92
48_K	53_L	0.761	0.92
125_L	343_M	0.760	0.92
301_D	304_G	0.759	0.92
51_T	82_Y	0.759	0.92
412_L	424_L	0.757	0.92
390_L	397_V	0.755	0.92
72_S	80_D	0.752	0.92
229_I	232_Q	0.751	0.91
382_M	386_F	0.750	0.91
125_L	351_V	0.746	0.91
239_V	251_P	0.746	0.91
83_Q	87_V	0.743	0.91
73_F	427_V	0.742	0.91
230_A	234_K	0.741	0.91
130_I	295_L	0.740	0.91
32_I	36_V	0.738	0.91
162_K	186_V	0.732	0.90
118_F	278_C	0.730	0.90
70_Y	73_F	0.730	0.90
152_H	287_L	0.730	0.90
225_D	229_I	0.729	0.90
354_I	358_N	0.727	0.90
415_T	424_L	0.727	0.90
320_R	323_K	0.726	0.90
168_S	212_Q	0.724	0.90
360_L	364_Y	0.724	0.90
192_V	380_G	0.724	0.90
283_V	291_V	0.722	0.90
434_E	437_D	0.722	0.90
163_T	219_R	0.721	0.90
149_A	158_I	0.720	0.90
78_V	140_T	0.719	0.90
269_I	338_A	0.716	0.89
108_S	330_S	0.716	0.89
312_L	315_R	0.715	0.89
150_S	207_A	0.714	0.89
388_I	443_L	0.713	0.89
122_I	264_A	0.713	0.89
365_A	439_L	0.711	0.89
390_L	399_K	0.711	0.89
100_Y	104_Q	0.708	0.89
132_N	291_V	0.707	0.89
71_A	406_M	0.707	0.89
192_V	222_P	0.705	0.89
164_V	185_E	0.703	0.89
365_A	369_A	0.703	0.89
239_V	257_S	0.701	0.88
293_G	299_T	0.701	0.88
158_I	207_A	0.700	0.88
223_L	239_V	0.698	0.88
163_T	193_T	0.698	0.88
73_F	439_L	0.697	0.88
76_A	166_P	0.695	0.88
160_V	169_R	0.695	0.88
414_L	423_M	0.695	0.88
356_R	360_L	0.694	0.88
300_E	304_G	0.693	0.88
124_E	348_K	0.693	0.88
399_K	414_L	0.690	0.88
176_A	181_I	0.686	0.87
432_T	435_E	0.684	0.87
434_E	438_A	0.683	0.87
71_A	431_R	0.683	0.87
157_K	180_Y	0.681	0.87
406_M	435_E	0.681	0.87
30_A	34_E	0.680	0.87
294_R	297_G	0.678	0.87
195_L	199_R	0.673	0.86
119_Q	295_L	0.673	0.86
189_A	194_D	0.672	0.86
264_A	267_F	0.670	0.86
386_F	425_I	0.669	0.86
239_V	260_V	0.669	0.86
208_A	234_K	0.669	0.86
44_I	47_A	0.669	0.86
106_E	109_Q	0.668	0.86
293_G	314_A	0.666	0.86
88_D	92_S	0.659	0.85
146_A	176_A	0.658	0.85
114_A	333_A	0.656	0.85
391_D	421_C	0.654	0.85
361_K	364_Y	0.652	0.85
100_Y	106_E	0.652	0.85
223_L	227_E	0.651	0.84
109_Q	116_F	0.651	0.84
231_H	235_S	0.650	0.84
430_L	435_E	0.648	0.84
35_N	39_K	0.648	0.84
392_E	400_R	0.646	0.84
173_K	177_K	0.646	0.84
191_G	221_E	0.644	0.84
173_K	185_E	0.641	0.84
293_G	315_R	0.638	0.83
371_K	444_G	0.638	0.83
297_G	311_T	0.636	0.83
108_S	321_R	0.634	0.83
341_V	344_T	0.633	0.83
297_G	330_S	0.633	0.83
248_L	356_R	0.633	0.83
37_K	40_K	0.631	0.83
119_Q	133_S	0.630	0.83
378_F	387_V	0.627	0.82
231_H	236_M	0.626	0.82
193_T	226_I	0.623	0.82
135_M	281_F	0.621	0.82
29_F	33_P	0.620	0.82
348_K	351_V	0.620	0.82
263_D	280_F	0.617	0.81
374_L	390_L	0.616	0.81
248_L	355_A	0.615	0.81
128_M	282_A	0.615	0.81
241_A	260_V	0.613	0.81
431_R	436_I	0.610	0.80
143_A	208_A	0.608	0.80
366_K	386_F	0.607	0.80
219_R	378_F	0.605	0.80
196_D	200_Q	0.605	0.80
115_I	336_A	0.604	0.80
293_G	323_K	0.602	0.80
162_K	183_V	0.601	0.79
114_A	336_A	0.601	0.79
153_T	207_A	0.601	0.79
161_S	215_N	0.600	0.79
348_K	352_K	0.598	0.79
247_G	355_A	0.598	0.79
122_I	132_N	0.594	0.79
295_L	315_R	0.593	0.79
290_K	317_Q	0.592	0.78
100_Y	297_G	0.592	0.78
263_D	279_G	0.591	0.78
206_T	229_I	0.590	0.78
244_L	342_A	0.590	0.78
125_L	243_P	0.590	0.78
368_E	372_A	0.588	0.78
310_L	315_R	0.586	0.78
289_R	316_E	0.584	0.78
295_L	310_L	0.583	0.77
306_R	310_L	0.581	0.77
246_L	255_F	0.581	0.77
160_V	210_I	0.580	0.77
87_V	91_I	0.580	0.77
365_A	425_I	0.579	0.77
367_Q	371_K	0.574	0.76
32_I	39_K	0.573	0.76
293_G	316_E	0.573	0.76
259_I	290_K	0.573	0.76
200_Q	203_C	0.571	0.76
127_G	253_G	0.571	0.76
217_F	387_V	0.568	0.76
400_R	404_K	0.568	0.76
236_M	287_L	0.566	0.75
293_G	312_L	0.566	0.75
249_L	352_K	0.565	0.75
244_L	247_G	0.564	0.75
155_K	204_E	0.563	0.75
220_I	359_L	0.563	0.75
32_I	38_Y	0.561	0.75
56_E	105_P	0.561	0.75
148_L	259_I	0.561	0.75
363_N	366_K	0.560	0.75
106_E	297_G	0.560	0.75
386_F	427_V	0.559	0.74
369_A	372_A	0.559	0.74
109_Q	113_Q	0.558	0.74
145_A	293_G	0.558	0.74
158_I	238_I	0.554	0.74
168_S	210_I	0.554	0.74
427_V	430_L	0.554	0.74
269_I	339_A	0.554	0.74
391_D	420_D	0.553	0.74
312_L	316_E	0.553	0.74
192_V	219_R	0.553	0.74
427_V	436_I	0.552	0.74
211_V	226_I	0.552	0.74
76_A	79_Y	0.550	0.73
135_M	279_G	0.550	0.73
413_G	420_D	0.549	0.73
300_E	306_R	0.549	0.73
308_F	312_L	0.548	0.73
293_G	324_A	0.548	0.73
29_F	34_E	0.548	0.73
269_I	272_A	0.548	0.73
178_G	207_A	0.548	0.73
90_V	93_R	0.547	0.73
55_R	82_Y	0.546	0.73
128_M	209_V	0.545	0.73
103_Y	297_G	0.544	0.72
244_L	267_F	0.544	0.72
103_Y	323_K	0.543	0.72
201_T	229_I	0.542	0.72
128_M	238_I	0.542	0.72
191_G	219_R	0.541	0.72
215_N	387_V	0.540	0.72
246_L	250_T	0.539	0.72
393_P	420_D	0.539	0.72
425_I	443_L	0.538	0.72
246_L	252_P	0.538	0.72
393_P	421_C	0.537	0.71
155_K	233_G	0.537	0.71
364_Y	368_E	0.537	0.71
40_K	43_Q	0.536	0.71
106_E	112_L	0.536	0.71
358_N	362_A	0.535	0.71
217_F	378_F	0.535	0.71
161_S	221_E	0.534	0.71
96_F	114_A	0.534	0.71
106_E	299_T	0.534	0.71
257_S	260_V	0.534	0.71
415_T	421_C	0.534	0.71
267_F	358_N	0.531	0.71
243_P	263_D	0.531	0.71
162_K	217_F	0.530	0.71
29_F	39_K	0.528	0.70
298_Q	308_F	0.527	0.70
135_M	328_I	0.527	0.70
332_Q	335_N	0.525	0.70
106_E	321_R	0.525	0.70
298_Q	301_D	0.524	0.70
76_A	426_A	0.523	0.70
438_A	441_Q	0.521	0.69
119_Q	330_S	0.521	0.69
154_K	204_E	0.519	0.69
397_V	443_L	0.518	0.69
346_L	351_V	0.518	0.69
31_D	402_L	0.517	0.69
364_Y	440_I	0.517	0.69
289_R	315_R	0.515	0.68
261_V	337_L	0.515	0.68
266_P	384_N	0.513	0.68
116_F	120_T	0.512	0.68
139_G	168_S	0.511	0.68
440_I	443_L	0.510	0.68
91_I	97_Y	0.510	0.68
150_S	153_T	0.509	0.67
349_N	352_K	0.509	0.67
217_F	415_T	0.509	0.67
202_V	230_A	0.507	0.67
223_L	237_F	0.506	0.67
374_L	402_L	0.506	0.67
321_R	324_A	0.505	0.67
92_S	97_Y	0.505	0.67
118_F	131_A	0.505	0.67
51_T	54_T	0.504	0.67
255_F	260_V	0.504	0.67
180_Y	205_N	0.503	0.67
293_G	310_L	0.503	0.67
299_T	307_G	0.502	0.66
121_M	340_S	0.501	0.66
146_A	208_A	0.500	0.66
155_K	206_T	0.500	0.66

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4lhdA	2	0.9554	100	0.463	Contact Map
1wyuA	2	0.9732	100	0.582	Contact Map
1wyuB	2	0.942	100	0.677	Contact Map
3mc6A	2	0.8281	100	0.763	Contact Map
3wcnA	2	0.8996	100	0.775	Contact Map
3hl2A	3	0.8527	100	0.803	Contact Map
3bc8A	3	0.8304	100	0.812	Contact Map
2z67A	4	0.8571	100	0.812	Contact Map
4obuE	2	0.8951	100	0.812	Contact Map
2jisA	2	0.9174	100	0.819	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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