BIOK - BACSU - GREMLIN Contacts

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BIOK - L-Lysine--8-amino-7-oxononanoate transaminase

UniProt:	P53555	Sequences: MTHDLIEKSKKHLWLPFTQMKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEVTSLED	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	448 (382)
Sequences:	20803 (12019)
Seq/√Len:	615.0

ECOLI - BIOA PAT ASTC GSA GABT ARGD PUUE
BACSU - BIOK YODT YHXA GSA GABT GSAB ARGD OAT
HALSA - Q9HHV4 GSA Q9HPQ4
SULSO - Q97VB5 Q97VA7 ARGD Q97U15 GSA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
70_K	74_G	4.240	1.00
238_R	242_T	3.980	1.00
405_L	438_Q	3.907	1.00
37_K	45_E	3.554	1.00
197_L	236_G	3.534	1.00
350_K	430_S	3.379	1.00
95_T	333_A	3.180	1.00
32_S	39_K	3.062	1.00
262_K	268_H	2.849	1.00
339_N	342_E	2.832	1.00
350_K	426_A	2.773	1.00
64_E	337_S	2.738	1.00
67_D	71_K	2.666	1.00
360_A	437_K	2.664	1.00
343_Q	347_K	2.546	1.00
425_T	428_E	2.518	1.00
49_G	432_M	2.342	1.00
95_T	336_E	2.339	1.00
354_L	433_V	2.335	1.00
236_G	239_E	2.314	1.00
330_E	333_A	2.302	1.00
64_E	330_E	2.262	1.00
346_E	426_A	2.233	1.00
239_E	243_T	2.209	1.00
201_A	243_T	2.199	1.00
31_E	41_I	2.189	1.00
64_E	334_L	2.180	1.00
401_K	404_E	2.169	1.00
62_K	334_L	2.155	1.00
37_K	428_E	2.153	1.00
405_L	442_E	2.123	1.00
177_P	199_E	2.082	1.00
401_K	442_E	2.047	1.00
39_K	45_E	2.008	1.00
361_L	437_K	2.004	1.00
138_K	210_E	1.985	1.00
407_M	435_I	1.972	1.00
354_L	430_S	1.940	1.00
215_S	249_I	1.915	1.00
95_T	329_L	1.909	1.00
92_L	328_A	1.906	1.00
401_K	405_L	1.822	1.00
349_K	353_F	1.821	1.00
66_D	70_K	1.799	1.00
106_R	296_E	1.797	1.00
296_E	300_K	1.792	1.00
352_H	356_Q	1.787	1.00
87_V	91_Q	1.784	1.00
110_S	290_A	1.769	1.00
431_E	435_I	1.764	1.00
94_E	98_D	1.759	1.00
40_D	44_K	1.758	1.00
105_T	296_E	1.750	1.00
214_L	241_C	1.746	1.00
31_E	75_K	1.742	1.00
69_I	327_V	1.734	1.00
334_L	338_E	1.729	1.00
200_L	237_V	1.726	1.00
44_K	406_G	1.720	1.00
216_I	237_V	1.713	1.00
365_G	379_V	1.709	1.00
34_T	63_K	1.628	1.00
37_K	431_E	1.623	1.00
69_I	73_L	1.621	1.00
352_H	369_Q	1.612	1.00
361_L	441_H	1.594	1.00
117_M	277_A	1.585	1.00
278_A	291_V	1.579	1.00
354_L	357_D	1.573	1.00
138_K	174_Y	1.570	1.00
201_A	205_E	1.568	1.00
142_M	233_Y	1.546	1.00
143_K	177_P	1.534	1.00
204_L	246_V	1.527	1.00
262_K	345_A	1.525	1.00
354_L	434_A	1.521	1.00
283_T	289_I	1.517	1.00
45_E	431_E	1.515	1.00
93_A	109_Y	1.514	1.00
287_L	324_G	1.512	1.00
99_I	336_E	1.506	1.00
347_K	350_K	1.504	1.00
127_Y	298_I	1.484	1.00
71_K	75_K	1.481	1.00
36_I	428_E	1.475	1.00
347_K	429_L	1.467	1.00
232_G	235_A	1.431	1.00
352_H	374_C	1.428	1.00
100_S	293_F	1.428	1.00
36_I	423_A	1.425	1.00
198_R	202_Q	1.424	1.00
201_A	236_G	1.410	1.00
250_V	266_C	1.403	1.00
179_P	230_P	1.396	1.00
278_A	293_F	1.386	1.00
330_E	334_L	1.386	1.00
40_D	46_Y	1.384	1.00
95_T	98_D	1.380	1.00
401_K	439_A	1.370	1.00
139_F	213_A	1.366	1.00
140_I	211_I	1.365	1.00
141_A	175_K	1.365	1.00
91_Q	329_L	1.364	1.00
343_Q	346_E	1.361	1.00
356_Q	359_H	1.355	1.00
405_L	439_A	1.353	1.00
238_R	248_M	1.353	1.00
107_V	293_F	1.347	1.00
30_I	38_V	1.345	1.00
329_L	333_A	1.334	1.00
289_I	325_C	1.334	1.00
120_A	277_A	1.333	1.00
238_R	241_C	1.332	1.00
63_K	67_D	1.331	1.00
124_A	249_I	1.330	1.00
119_I	292_T	1.328	1.00
198_R	201_A	1.328	1.00
350_K	354_L	1.321	1.00
402_M	409_T	1.312	1.00
121_L	139_F	1.312	1.00
262_K	267_E	1.307	1.00
354_L	437_K	1.305	1.00
197_L	240_L	1.299	1.00
282_I	289_I	1.291	1.00
437_K	441_H	1.288	1.00
91_Q	333_A	1.286	1.00
62_K	338_E	1.281	1.00
424_S	429_L	1.273	1.00
156_V	173_S	1.271	1.00
216_I	234_L	1.264	1.00
263_M	267_E	1.258	1.00
32_S	75_K	1.258	1.00
342_E	346_E	1.253	1.00
205_E	244_Y	1.249	1.00
97_I	107_V	1.247	1.00
250_V	271_V	1.247	1.00
214_L	237_V	1.243	1.00
98_D	336_E	1.242	1.00
282_I	291_V	1.239	1.00
347_K	426_A	1.237	1.00
232_G	269_E	1.235	1.00
289_I	328_A	1.233	1.00
34_T	61_R	1.230	1.00
117_M	215_S	1.230	1.00
69_I	323_L	1.228	1.00
269_E	370_L	1.226	1.00
266_C	276_M	1.222	1.00
275_L	294_A	1.222	1.00
127_Y	301_A	1.220	1.00
202_Q	206_E	1.201	1.00
67_D	70_K	1.200	1.00
358_L	433_V	1.195	1.00
176_A	203_L	1.191	1.00
68_A	330_E	1.181	1.00
58_H	334_L	1.174	1.00
136_K	245_D	1.172	1.00
333_A	337_S	1.167	1.00
201_A	240_L	1.164	1.00
110_S	292_T	1.162	1.00
106_R	300_K	1.161	1.00
268_H	370_L	1.157	1.00
235_A	239_E	1.156	1.00
402_M	435_I	1.154	1.00
428_E	431_E	1.138	1.00
70_K	73_L	1.134	1.00
66_D	73_L	1.134	1.00
272_Q	295_T	1.129	1.00
61_R	66_D	1.126	1.00
247_L	298_I	1.120	1.00
66_D	74_G	1.119	1.00
34_T	45_E	1.117	1.00
128_W	212_A	1.115	1.00
156_V	215_S	1.105	1.00
434_A	438_Q	1.103	1.00
37_K	47_Y	1.098	1.00
275_L	292_T	1.087	1.00
407_M	432_M	1.083	1.00
341_V	344_V	1.082	1.00
402_M	439_A	1.078	1.00
109_Y	325_C	1.075	1.00
258_G	341_V	1.071	1.00
201_A	244_Y	1.070	1.00
235_A	270_N	1.065	1.00
426_A	430_S	1.061	1.00
114_A	153_A	1.060	1.00
353_F	357_D	1.049	1.00
402_M	407_M	1.048	1.00
121_L	156_V	1.046	1.00
264_F	278_A	1.043	1.00
345_A	349_K	1.041	1.00
92_L	329_L	1.041	1.00
241_C	246_V	1.038	1.00
431_E	434_A	1.027	1.00
405_L	435_I	1.026	1.00
284_G	331_N	1.025	1.00
36_I	47_Y	1.024	1.00
334_L	337_S	1.011	1.00
155_S	170_M	1.007	1.00
103_K	272_Q	1.007	1.00
65_L	327_V	0.996	1.00
31_E	87_V	0.991	1.00
430_S	434_A	0.990	1.00
123_M	292_T	0.989	1.00
141_A	215_S	0.978	1.00
261_G	267_E	0.974	1.00
237_V	248_M	0.973	1.00
201_A	239_E	0.972	1.00
204_L	211_I	0.970	1.00
335_F	340_I	0.966	1.00
31_E	43_G	0.962	1.00
116_A	277_A	0.958	1.00
58_H	331_N	0.953	1.00
34_T	39_K	0.942	1.00
343_Q	426_A	0.941	1.00
239_E	242_T	0.936	1.00
326_A	330_E	0.936	1.00
358_L	437_K	0.934	1.00
365_G	377_E	0.933	1.00
427_E	430_S	0.932	1.00
142_M	229_M	0.929	1.00
29_I	41_I	0.928	1.00
57_V	281_G	0.926	1.00
218_S	250_V	0.920	1.00
199_E	202_Q	0.920	1.00
375_G	415_V	0.919	1.00
335_F	341_V	0.916	1.00
240_L	244_Y	0.911	1.00
220_V	370_L	0.910	1.00
31_E	39_K	0.909	1.00
257_F	335_F	0.905	1.00
234_L	269_E	0.901	1.00
138_K	211_I	0.893	1.00
342_E	345_A	0.892	1.00
104_L	293_F	0.891	1.00
400_L	404_E	0.891	1.00
56_N	284_G	0.890	1.00
340_I	344_V	0.888	1.00
47_Y	428_E	0.888	1.00
114_A	150_T	0.885	1.00
142_M	178_I	0.884	1.00
64_E	67_D	0.879	1.00
178_I	229_M	0.879	1.00
377_E	414_D	0.879	1.00
231_E	235_A	0.879	1.00
29_I	90_T	0.877	1.00
36_I	425_T	0.875	1.00
99_I	263_M	0.873	1.00
67_D	74_G	0.869	1.00
213_A	249_I	0.869	1.00
138_K	205_E	0.868	1.00
58_H	65_L	0.868	1.00
228_V	370_L	0.867	1.00
71_K	74_G	0.866	1.00
203_L	206_E	0.862	1.00
49_G	424_S	0.861	1.00
137_Q	210_E	0.858	1.00
95_T	99_I	0.858	1.00
99_I	332_L	0.856	1.00
47_Y	431_E	0.856	1.00
366_D	377_E	0.855	1.00
268_H	345_A	0.853	1.00
397_K	401_K	0.841	1.00
359_H	364_V	0.839	1.00
49_G	407_M	0.836	1.00
208_H	244_Y	0.836	1.00
120_A	249_I	0.835	1.00
354_L	429_L	0.833	1.00
124_A	213_A	0.831	1.00
111_D	115_E	0.827	1.00
287_L	323_L	0.824	1.00
137_Q	172_E	0.823	1.00
64_E	333_A	0.823	1.00
232_G	236_G	0.822	1.00
127_Y	247_L	0.819	1.00
123_M	294_A	0.819	1.00
245_D	297_D	0.817	1.00
71_K	326_A	0.817	1.00
242_T	272_Q	0.812	1.00
41_I	87_V	0.812	1.00
424_S	432_M	0.812	1.00
257_F	332_L	0.811	1.00
373_M	419_L	0.810	1.00
229_M	232_G	0.808	1.00
124_A	247_L	0.806	1.00
36_I	421_P	0.803	1.00
238_R	271_V	0.802	1.00
176_A	200_L	0.798	1.00
357_D	360_A	0.798	1.00
372_F	424_S	0.797	1.00
348_S	352_H	0.796	1.00
177_P	180_Y	0.792	1.00
30_I	33_G	0.791	1.00
220_V	373_M	0.790	1.00
126_Q	313_F	0.790	1.00
128_W	245_D	0.790	1.00
257_F	282_I	0.785	1.00
64_E	68_A	0.785	1.00
353_F	356_Q	0.785	1.00
110_S	116_A	0.782	1.00
255_T	373_M	0.782	1.00
341_V	345_A	0.778	1.00
214_L	246_V	0.777	1.00
91_Q	95_T	0.777	1.00
102_K	276_M	0.775	1.00
101_P	266_C	0.774	1.00
35_G	423_A	0.773	1.00
97_I	104_L	0.772	1.00
263_M	341_V	0.771	1.00
96_L	293_F	0.770	1.00
204_L	240_L	0.769	1.00
228_V	369_Q	0.764	1.00
378_L	398_V	0.763	1.00
346_E	350_K	0.763	1.00
357_D	437_K	0.760	1.00
92_L	325_C	0.759	1.00
88_P	326_A	0.759	1.00
121_L	215_S	0.758	1.00
107_V	291_V	0.758	1.00
242_T	248_M	0.757	1.00
438_Q	442_E	0.756	1.00
200_L	214_L	0.752	1.00
236_G	240_L	0.749	1.00
418_F	436_M	0.746	1.00
47_Y	432_M	0.743	1.00
350_K	353_F	0.743	1.00
257_F	278_A	0.741	1.00
368_R	377_E	0.740	1.00
316_H	319_T	0.736	1.00
264_F	276_M	0.736	1.00
68_A	327_V	0.735	1.00
263_M	336_E	0.735	1.00
266_C	271_V	0.733	1.00
54_W	419_L	0.732	1.00
124_A	275_L	0.728	1.00
398_V	436_M	0.728	1.00
360_A	441_H	0.727	1.00
174_Y	203_L	0.727	1.00
218_S	234_L	0.726	1.00
51_S	419_L	0.726	1.00
241_C	248_M	0.725	1.00
95_T	332_L	0.723	1.00
278_A	282_I	0.717	1.00
211_I	246_V	0.716	1.00
367_I	374_C	0.715	1.00
260_T	268_H	0.713	1.00
65_L	284_G	0.713	1.00
207_H	210_E	0.711	1.00
112_S	115_E	0.707	1.00
89_A	93_A	0.703	1.00
50_F	410_R	0.701	1.00
297_D	300_K	0.701	1.00
199_E	203_L	0.700	1.00
38_V	408_L	0.700	1.00
88_P	329_L	0.697	1.00
310_K	313_F	0.697	1.00
432_M	435_I	0.695	1.00
377_E	415_V	0.694	1.00
379_V	382_K	0.691	1.00
86_N	89_A	0.691	1.00
44_K	404_E	0.691	1.00
176_A	199_E	0.690	1.00
122_K	314_H	0.687	1.00
257_F	263_M	0.687	1.00
88_P	92_L	0.686	1.00
367_I	376_A	0.686	1.00
152_G	170_M	0.686	1.00
73_L	323_L	0.684	1.00
369_Q	374_C	0.684	1.00
222_G	373_M	0.684	1.00
344_V	348_S	0.682	1.00
88_P	325_C	0.681	1.00
398_V	439_A	0.680	1.00
117_M	153_A	0.677	1.00
248_M	271_V	0.677	1.00
347_K	372_F	0.676	1.00
75_K	87_V	0.675	1.00
90_T	94_E	0.674	1.00
399_S	411_P	0.674	1.00
298_I	301_A	0.673	1.00
396_Y	400_L	0.671	1.00
348_S	369_Q	0.671	1.00
110_S	115_E	0.671	1.00
85_T	90_T	0.670	1.00
235_A	269_E	0.670	1.00
127_Y	297_D	0.668	1.00
220_V	260_T	0.665	1.00
33_G	76_I	0.665	1.00
433_V	437_K	0.663	1.00
427_E	431_E	0.662	1.00
216_I	248_M	0.661	1.00
61_R	73_L	0.659	1.00
92_L	289_I	0.658	1.00
72_Q	75_K	0.658	1.00
418_F	432_M	0.658	1.00
140_I	200_L	0.656	1.00
346_E	349_K	0.656	1.00
249_I	275_L	0.656	1.00
101_P	267_E	0.655	1.00
123_M	302_F	0.654	1.00
136_K	246_V	0.654	1.00
350_K	429_L	0.651	1.00
47_Y	407_M	0.650	1.00
104_L	276_M	0.649	1.00
77_A	287_L	0.649	1.00
204_L	244_Y	0.648	1.00
234_L	250_V	0.648	1.00
376_A	436_M	0.647	1.00
253_V	277_A	0.645	1.00
358_L	361_L	0.644	1.00
347_K	424_S	0.642	1.00
351_L	433_V	0.641	1.00
125_F	168_P	0.641	1.00
359_H	366_D	0.639	1.00
361_L	440_I	0.638	1.00
439_A	442_E	0.638	1.00
146_Y	149_D	0.637	1.00
138_K	172_E	0.637	1.00
402_M	436_M	0.636	1.00
295_T	298_I	0.636	1.00
119_I	314_H	0.634	1.00
58_H	340_I	0.634	1.00
343_Q	429_L	0.634	1.00
294_A	299_Y	0.632	1.00
88_P	91_Q	0.627	1.00
343_Q	425_T	0.626	1.00
258_G	335_F	0.626	1.00
120_A	275_L	0.625	1.00
257_F	264_F	0.625	1.00
100_S	278_A	0.624	1.00
378_L	440_I	0.624	1.00
100_S	276_M	0.623	1.00
416_I	436_M	0.623	1.00
231_E	370_L	0.620	1.00
398_V	402_M	0.619	1.00
73_L	327_V	0.619	1.00
221_Q	224_S	0.617	1.00
407_M	431_E	0.615	1.00
33_G	38_V	0.615	1.00
279_G	290_A	0.610	1.00
65_L	331_N	0.609	1.00
99_I	264_F	0.608	1.00
176_A	179_P	0.608	1.00
101_P	104_L	0.607	1.00
142_M	237_V	0.606	1.00
327_V	330_E	0.605	1.00
140_I	176_A	0.604	1.00
65_L	330_E	0.604	1.00
50_F	408_L	0.602	1.00
347_K	425_T	0.600	1.00
123_M	275_L	0.598	1.00
279_G	318_Y	0.598	1.00
51_S	421_P	0.597	1.00
36_I	424_S	0.597	1.00
68_A	71_K	0.596	1.00
72_Q	88_P	0.594	1.00
397_K	400_L	0.593	1.00
436_M	440_I	0.591	1.00
200_L	240_L	0.591	1.00
57_V	422_L	0.591	1.00
29_I	85_T	0.590	1.00
143_K	175_K	0.589	1.00
351_L	374_C	0.589	1.00
128_W	136_K	0.589	1.00
142_M	176_A	0.588	1.00
231_E	269_E	0.587	1.00
242_T	297_D	0.586	1.00
218_S	266_C	0.586	1.00
92_L	109_Y	0.585	1.00
344_V	422_L	0.585	1.00
202_Q	205_E	0.585	1.00
136_K	210_E	0.583	1.00
221_Q	227_I	0.582	1.00
141_A	173_S	0.581	1.00
45_E	435_I	0.581	1.00
72_Q	76_I	0.581	1.00
140_I	203_L	0.577	1.00
214_L	242_T	0.574	1.00
113_G	253_V	0.572	1.00
32_S	45_E	0.571	1.00
31_E	34_T	0.569	1.00
349_K	352_H	0.568	1.00
435_I	439_A	0.568	1.00
197_L	200_L	0.565	1.00
398_V	416_I	0.565	1.00
266_C	273_P	0.562	1.00
99_I	262_K	0.562	1.00
400_L	403_R	0.561	1.00
103_K	295_T	0.561	1.00
228_V	269_E	0.560	1.00
33_G	56_N	0.560	1.00
125_F	151_I	0.560	1.00
359_H	367_I	0.559	1.00
97_I	293_F	0.557	1.00
435_I	438_Q	0.557	1.00
240_L	243_T	0.557	1.00
263_M	332_L	0.557	1.00
69_I	77_A	0.556	1.00
351_L	429_L	0.556	1.00
363_H	379_V	0.554	1.00
200_L	236_G	0.554	1.00
222_G	254_A	0.553	1.00
344_V	372_F	0.553	1.00
197_L	201_A	0.553	1.00
364_V	440_I	0.552	1.00
176_A	180_Y	0.552	1.00
330_E	337_S	0.550	1.00
407_M	439_A	0.550	1.00
424_S	428_E	0.550	1.00
376_A	418_F	0.549	0.99
399_S	403_R	0.549	0.99
198_R	236_G	0.549	0.99
142_M	216_I	0.548	0.99
380_R	383_E	0.548	0.99
28_L	31_E	0.547	0.99
100_S	264_F	0.546	0.99
218_S	255_T	0.546	0.99
329_L	336_E	0.546	0.99
57_V	335_F	0.546	0.99
68_A	333_A	0.545	0.99
275_L	298_I	0.544	0.99
398_V	440_I	0.543	0.99
84_M	408_L	0.541	0.99
174_Y	177_P	0.541	0.99
351_L	354_L	0.541	0.99
350_K	433_V	0.540	0.99
128_W	132_G	0.538	0.99
364_V	376_A	0.538	0.99
254_A	373_M	0.536	0.99
423_A	428_E	0.535	0.99
368_R	375_G	0.534	0.99
66_D	284_G	0.534	0.99
47_Y	424_S	0.533	0.99
263_M	335_F	0.532	0.99
224_S	227_I	0.532	0.99
75_K	88_P	0.532	0.99
336_E	339_N	0.532	0.99
34_T	37_K	0.530	0.99
223_A	417_A	0.530	0.99
237_V	246_V	0.528	0.99
73_L	77_A	0.527	0.99
340_I	343_Q	0.526	0.99
432_M	436_M	0.526	0.99
58_H	62_K	0.524	0.99
321_N	324_G	0.523	0.99
403_R	408_L	0.522	0.99
429_L	432_M	0.521	0.99
121_L	152_G	0.521	0.99
406_G	435_I	0.519	0.99
97_I	105_T	0.518	0.99
30_I	84_M	0.518	0.99
29_I	87_V	0.517	0.99
30_I	76_I	0.514	0.99
65_L	69_I	0.514	0.99
200_L	233_Y	0.514	0.99
102_K	266_C	0.512	0.99
65_L	334_L	0.512	0.99
378_L	394_I	0.512	0.99
332_L	336_E	0.511	0.99
121_L	173_S	0.511	0.99
349_K	356_Q	0.509	0.99
368_R	415_V	0.508	0.99
431_E	438_Q	0.508	0.99
40_D	406_G	0.508	0.99
94_E	97_I	0.507	0.99
421_P	424_S	0.507	0.99
158_S	175_K	0.505	0.99
254_A	417_A	0.503	0.99
276_M	293_F	0.503	0.99
410_R	413_G	0.503	0.99
363_H	440_I	0.502	0.99
235_A	238_R	0.501	0.99
247_L	275_L	0.500	0.99
197_L	237_V	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4e3qA	3	0.9933	100	0.371	Contact Map
4a0gA	2	0.9576	100	0.379	Contact Map
3hmuA	2	0.9844	100	0.38	Contact Map
3i5tA	2	0.9799	100	0.389	Contact Map
4uoxA	3	0.9174	100	0.393	Contact Map
4atqA	7	0.933	100	0.395	Contact Map
3oksA	2	0.933	100	0.396	Contact Map
4ffcA	4	0.9353	100	0.406	Contact Map
1z7dA	2	0.8348	100	0.409	Contact Map
2epjA	2	0.9219	100	0.413	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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