YQFF - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YQFF - Uncharacterized protein YqfF

UniProt:	P46344	Sequences: MLKKKAKTKSSSKKWSSFKNARSMHVLLYLLLAAIMFALLFVHVKPETLDLDLFSVSDKTIYAPATVEDQKATEEKKQAAEDAVEDQYTLKKEYTDNRIDLVSSIFDSISEVKKSSEEGSKSPSEKSMVKSVKDKLTSDVNDSISEDSIKTLLKADSEDFSFVRDTVITAVNTVMSSEIPSDKLSDAKDKVEKELKSNSIPSKYLGAATEIGRFAIIPNYVFDPKATEAKRQEASDNVQQVQIKQGQVLVEENDLIDREVYRKLELTGLLNNSNLFKPISGLLIMIGLFIATLVYYFEKQKQNLKFKNQSILLFSIITTLLLVIMEVVSLFQKMEYNNIGYLVPIAAGAILIKLLMNERIAILGSIILAICGSMMFNQGVTGTFNYVIGIYYLISGISGVLFLGKHNARSKILQTGLFVAFINMVVVLSLLLIQNTALSGLEIGTLMLMGVVSGFASSVLIIGLMPFFETGFGILSTMRLLELSNPNHPLLRKILTETPGTYHHSVMVANLSEAACEAVGANGLLARVGAYYHDLGKTKRPQYFIENQMNIDNPHDKLSPQLSKNIIISHTTDGANMLRSYKFPKELVDIAEQHHGTSLLKFFYYKAKEKGDQITEEEFRYPGPKPQSKEAAIISVADSVEAAVRSMHNPNPERIEKLVRGIISDKLQDGQFSECDLTFKELDTIAKTLCATLKGIFHSRIEYPEATKKVK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	711 (658)
Sequences:	939 (763)
Seq/√Len:	29.7

BACSU - YQFF

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
89_T	223_D	6.849	1.00
493_K	497_E	6.645	1.00
639_S	662_I	6.322	1.00
516_C	521_A	6.187	1.00
616_E	620_R	5.629	1.00
590_I	631_A	5.499	1.00
593_Q	631_A	5.366	1.00
672_F	689_L	5.001	1.00
615_T	618_E	4.953	1.00
516_C	633_I	4.939	1.00
568_I	622_P	4.796	1.00
575_A	588_V	4.769	1.00
365_S	396_G	4.585	1.00
660_R	686_A	4.376	1.00
599_L	620_R	4.136	1.00
626_P	635_S	4.108	1.00
81_E	235_S	3.914	1.00
599_L	616_E	3.842	1.00
637_A	689_L	3.765	1.00
659_V	690_C	3.734	1.00
74_E	77_K	3.691	1.00
578_L	591_A	3.576	1.00
232_Q	236_D	3.557	1.00
350_I	461_I	3.355	1.00
636_V	672_F	3.293	1.00
529_G	590_I	3.284	1.00
636_V	689_L	3.268	1.00
493_K	538_T	3.252	1.00
257_D	260_V	3.128	1.00
590_I	634_I	3.087	1.00
555_H	563_S	3.038	1.00
222_F	228_E	3.000	1.00
247_Q	263_K	2.908	1.00
593_Q	627_Q	2.806	1.00
74_E	78_Q	2.781	1.00
56_V	255_L	2.754	1.00
244_K	247_Q	2.705	1.00
575_A	592_E	2.698	1.00
605_Y	608_K	2.685	1.00
589_D	593_Q	2.595	1.00
459_V	463_G	2.591	1.00
539_K	573_D	2.582	1.00
250_V	260_V	2.581	1.00
673_S	683_D	2.532	0.99
628_S	631_A	2.520	0.99
606_K	609_E	2.459	0.99
639_S	666_K	2.447	0.99
632_A	675_C	2.405	0.99
515_A	685_I	2.396	0.99
577_M	581_Y	2.389	0.99
477_T	522_N	2.378	0.99
562_L	565_N	2.357	0.99
398_S	422_I	2.306	0.99
427_V	450_G	2.301	0.99
60_T	251_E	2.300	0.99
545_I	646_S	2.276	0.99
670_G	673_S	2.241	0.99
627_Q	674_E	2.229	0.99
281_G	432_L	2.179	0.98
69_D	72_A	2.128	0.98
661_G	705_E	2.122	0.98
416_G	454_G	2.114	0.98
663_I	686_A	2.109	0.98
568_I	600_L	2.083	0.98
394_I	422_I	2.083	0.98
521_A	633_I	2.065	0.98
390_I	426_V	2.060	0.97
565_N	572_T	2.032	0.97
585_K	589_D	2.024	0.97
639_S	643_A	2.010	0.97
616_E	659_V	1.989	0.97
664_S	668_Q	1.967	0.97
548_Q	553_N	1.967	0.97
80_A	84_V	1.967	0.97
529_G	628_S	1.956	0.97
607_A	611_G	1.914	0.96
228_E	232_Q	1.900	0.96
102_V	211_I	1.887	0.96
598_S	639_S	1.868	0.95
301_K	357_N	1.834	0.95
601_K	605_Y	1.827	0.95
223_D	226_A	1.812	0.95
646_S	662_I	1.806	0.95
373_S	389_G	1.801	0.94
248_V	251_E	1.798	0.94
147_D	152_L	1.783	0.94
620_R	669_D	1.774	0.94
420_A	454_G	1.762	0.94
224_P	228_E	1.754	0.94
643_A	658_L	1.742	0.93
80_A	235_S	1.735	0.93
317_I	348_G	1.729	0.93
597_T	624_P	1.720	0.93
349_A	365_S	1.715	0.93
648_H	702_E	1.701	0.93
519_V	633_I	1.697	0.92
60_T	252_E	1.691	0.92
598_S	666_K	1.690	0.92
69_D	262_R	1.689	0.92
515_A	689_L	1.671	0.92
564_K	568_I	1.666	0.92
487_N	522_N	1.657	0.92
518_A	684_T	1.647	0.91
314_F	352_I	1.625	0.91
82_D	211_I	1.608	0.90
529_G	631_A	1.593	0.90
229_A	233_E	1.590	0.90
512_S	633_I	1.557	0.89
561_Q	565_N	1.555	0.89
464_L	659_V	1.548	0.88
643_A	662_I	1.548	0.88
257_D	399_G	1.546	0.88
78_Q	82_D	1.543	0.88
488_H	532_Y	1.539	0.88
516_C	526_A	1.539	0.88
22_R	231_R	1.538	0.88
540_R	562_L	1.533	0.88
562_L	569_S	1.526	0.88
416_G	420_A	1.520	0.88
521_A	630_E	1.501	0.87
386_Y	628_S	1.484	0.86
647_M	658_L	1.478	0.86
503_H	695_G	1.475	0.86
421_F	425_V	1.456	0.85
497_E	538_T	1.452	0.85
569_S	572_T	1.451	0.85
503_H	528_V	1.447	0.85
653_E	657_K	1.434	0.84
672_F	681_E	1.432	0.84
238_V	350_I	1.418	0.84
560_P	606_K	1.411	0.83
639_S	658_L	1.410	0.83
567_I	600_L	1.409	0.83
655_I	693_L	1.403	0.83
656_E	660_R	1.393	0.82
548_Q	556_D	1.386	0.82
492_R	691_A	1.386	0.82
503_H	680_K	1.382	0.82
652_P	694_K	1.379	0.82
558_L	562_L	1.374	0.82
395_S	423_N	1.367	0.81
357_N	622_P	1.357	0.81
612_D	677_L	1.346	0.80
73_T	240_Q	1.344	0.80
313_L	355_L	1.343	0.80
283_L	543_Y	1.341	0.80
153_L	220_Y	1.337	0.80
313_L	468_F	1.333	0.80
543_Y	558_L	1.333	0.80
256_I	668_Q	1.329	0.79
677_L	681_E	1.322	0.79
588_V	628_S	1.320	0.79
597_T	620_R	1.320	0.79
492_R	503_H	1.319	0.79
591_A	635_S	1.319	0.79
352_I	364_G	1.316	0.79
629_K	681_E	1.314	0.79
148_S	151_T	1.314	0.79
146_E	651_N	1.308	0.78
420_A	583_F	1.285	0.77
625_K	674_E	1.285	0.77
567_I	602_F	1.281	0.77
97_N	217_I	1.279	0.77
233_E	239_Q	1.278	0.77
409_R	469_E	1.276	0.76
481_L	513_E	1.275	0.76
672_F	677_L	1.262	0.76
406_H	478_M	1.259	0.75
597_T	671_Q	1.257	0.75
317_I	351_L	1.255	0.75
597_T	625_K	1.253	0.75
655_I	690_C	1.251	0.75
640_V	689_L	1.248	0.75
67_V	266_L	1.245	0.75
92_K	629_K	1.243	0.74
67_V	256_I	1.240	0.74
353_K	358_E	1.237	0.74
291_A	617_E	1.231	0.74
427_V	503_H	1.227	0.74
299_K	619_F	1.227	0.74
509_A	633_I	1.224	0.73
494_I	583_F	1.219	0.73
491_L	509_A	1.219	0.73
398_S	430_L	1.213	0.73
369_A	485_N	1.208	0.72
53_L	258_R	1.207	0.72
450_G	506_V	1.205	0.72
487_N	567_I	1.203	0.72
417_L	421_F	1.198	0.72
91_K	97_N	1.197	0.72
361_A	400_V	1.197	0.72
64_P	489_P	1.194	0.71
656_E	690_C	1.194	0.71
571_T	591_A	1.193	0.71
58_D	249_L	1.189	0.71
502_Y	531_Y	1.187	0.71
76_K	241_V	1.183	0.71
474_I	666_K	1.182	0.71
33_A	290_I	1.180	0.71
510_N	697_F	1.178	0.70
342_L	410_S	1.173	0.70
463_G	497_E	1.173	0.70
598_S	602_F	1.171	0.70
429_S	455_F	1.166	0.70
103_S	327_V	1.166	0.70
627_Q	631_A	1.164	0.69
664_S	667_L	1.160	0.69
688_T	692_T	1.157	0.69
87_Q	230_K	1.151	0.69
673_S	682_L	1.151	0.69
539_K	577_M	1.150	0.68
49_L	580_S	1.148	0.68
147_D	151_T	1.146	0.68
72_A	75_E	1.143	0.68
390_I	394_I	1.141	0.68
571_T	583_F	1.140	0.68
265_E	268_G	1.140	0.68
350_I	354_L	1.138	0.68
232_Q	668_Q	1.137	0.68
519_V	655_I	1.131	0.67
559_S	619_F	1.128	0.67
113_K	157_S	1.127	0.67
70_Q	74_E	1.127	0.67
35_I	651_N	1.125	0.67
499_P	503_H	1.120	0.66
359_R	530_A	1.117	0.66
209_T	350_I	1.116	0.66
67_V	243_I	1.113	0.66
659_V	693_L	1.110	0.66
55_S	244_K	1.095	0.65
299_K	579_R	1.093	0.64
689_L	692_T	1.093	0.64
559_S	562_L	1.089	0.64
463_G	486_P	1.088	0.64
216_I	247_Q	1.083	0.64
35_I	136_L	1.082	0.64
247_Q	251_E	1.081	0.64
560_P	610_K	1.080	0.64
672_F	685_I	1.076	0.63
412_I	476_S	1.076	0.63
556_D	606_K	1.075	0.63
60_T	460_L	1.073	0.63
514_A	688_T	1.070	0.63
515_A	637_A	1.069	0.63
355_L	474_I	1.068	0.63
543_Y	554_P	1.068	0.63
513_E	671_Q	1.066	0.63
602_F	697_F	1.064	0.62
453_S	701_I	1.063	0.62
227_T	614_I	1.057	0.62
561_Q	619_F	1.056	0.62
35_I	82_D	1.053	0.62
312_L	319_T	1.052	0.61
495_L	502_Y	1.049	0.61
34_A	280_S	1.048	0.61
635_S	666_K	1.045	0.61
77_K	108_S	1.040	0.61
102_V	140_V	1.036	0.60
257_D	492_R	1.036	0.60
511_L	527_R	1.035	0.60
250_V	478_M	1.034	0.60
144_I	233_E	1.033	0.60
316_I	684_T	1.030	0.60
657_K	661_G	1.030	0.60
562_L	572_T	1.028	0.60
527_R	584_P	1.027	0.60
569_S	573_D	1.022	0.59
565_N	653_E	1.017	0.59
531_Y	644_V	1.012	0.58
219_N	355_L	1.011	0.58
348_G	368_L	1.010	0.58
695_G	702_E	1.010	0.58
61_I	288_L	1.009	0.58
472_F	482_E	1.008	0.58
72_A	76_K	1.008	0.58
474_I	629_K	1.008	0.58
263_K	267_T	1.006	0.58
280_S	684_T	1.004	0.58
632_A	677_L	1.002	0.58
564_K	591_A	1.000	0.57
558_L	661_G	0.997	0.57
579_R	588_V	0.996	0.57
103_S	168_I	0.995	0.57
231_R	629_K	0.992	0.57
626_P	672_F	0.992	0.57
112_V	115_S	0.990	0.57
521_A	543_Y	0.990	0.57
545_I	701_I	0.983	0.56
560_P	607_A	0.983	0.56
660_R	663_I	0.974	0.55
73_T	502_Y	0.972	0.55
525_L	590_I	0.970	0.55
69_D	466_P	0.970	0.55
251_E	254_D	0.969	0.55
184_L	216_I	0.968	0.55
73_T	241_V	0.967	0.55
93_E	161_S	0.966	0.55
214_F	617_E	0.964	0.55
672_F	675_C	0.964	0.55
530_A	634_I	0.963	0.55
355_L	468_F	0.961	0.54
455_F	649_N	0.959	0.54
578_L	635_S	0.959	0.54
257_D	261_Y	0.958	0.54
84_V	205_L	0.951	0.54
565_N	569_S	0.950	0.54
644_V	655_I	0.949	0.54
409_R	482_E	0.949	0.54
33_A	286_I	0.947	0.53
418_F	455_F	0.946	0.53
222_F	597_T	0.943	0.53
374_M	616_E	0.941	0.53
407_N	477_T	0.937	0.53
588_V	592_E	0.936	0.52
313_L	474_I	0.936	0.52
70_Q	92_K	0.935	0.52
572_T	576_N	0.934	0.52
263_K	415_T	0.934	0.52
578_L	583_F	0.933	0.52
409_R	548_Q	0.933	0.52
212_G	675_C	0.931	0.52
519_V	664_S	0.931	0.52
69_D	73_T	0.928	0.52
146_E	156_D	0.925	0.52
388_I	661_G	0.925	0.52
602_F	606_K	0.925	0.52
254_D	290_I	0.924	0.52
475_L	586_E	0.924	0.52
601_K	665_D	0.923	0.51
539_K	629_K	0.922	0.51
466_P	701_I	0.919	0.51
299_K	314_F	0.917	0.51
577_M	661_G	0.914	0.51
68_E	240_Q	0.909	0.50
167_V	208_A	0.909	0.50
283_L	417_L	0.908	0.50
63_A	461_I	0.908	0.50
366_I	430_L	0.905	0.50
591_A	600_L	0.903	0.50
20_N	23_S	0.901	0.50
34_A	432_L	0.900	0.50
223_D	527_R	0.900	0.50
352_I	360_I	0.900	0.50
593_Q	628_S	0.899	0.50
362_I	428_L	0.897	0.49
357_N	696_I	0.896	0.49
101_L	112_V	0.896	0.49
281_G	677_L	0.896	0.49
282_L	681_E	0.889	0.49
448_L	571_T	0.887	0.49
311_I	587_L	0.882	0.48
74_E	614_I	0.881	0.48
233_E	425_V	0.879	0.48
477_T	696_I	0.879	0.48
517_E	523_G	0.876	0.48
288_L	426_V	0.872	0.47
80_A	234_A	0.871	0.47
74_E	439_S	0.870	0.47
30_L	375_M	0.868	0.47
461_I	582_K	0.863	0.47
674_E	683_D	0.860	0.46
585_K	592_E	0.860	0.46
39_L	375_M	0.858	0.46
346_A	392_Y	0.858	0.46
222_F	227_T	0.857	0.46
75_E	79_A	0.857	0.46
366_I	393_L	0.856	0.46
564_K	635_S	0.856	0.46
92_K	197_S	0.856	0.46
372_G	578_L	0.855	0.46
597_T	617_E	0.852	0.46
237_N	284_I	0.852	0.46
259_E	263_K	0.849	0.46
530_A	580_S	0.848	0.46
512_S	681_E	0.843	0.45
183_K	188_K	0.843	0.45
463_G	466_P	0.841	0.45
505_S	592_E	0.840	0.45
471_G	573_D	0.839	0.45
256_I	670_G	0.839	0.45
226_A	230_K	0.837	0.45
458_S	685_I	0.837	0.45
625_K	671_Q	0.837	0.45
612_D	664_S	0.837	0.45
343_V	429_S	0.836	0.45
545_I	696_I	0.836	0.45
70_Q	233_E	0.835	0.45
419_V	651_N	0.834	0.44
608_K	614_I	0.834	0.44
102_V	220_Y	0.833	0.44
203_K	279_I	0.832	0.44
60_T	636_V	0.831	0.44
398_S	402_F	0.831	0.44
68_E	73_T	0.828	0.44
149_I	460_L	0.827	0.44
502_Y	593_Q	0.827	0.44
141_N	421_F	0.827	0.44
430_L	451_V	0.826	0.44
540_R	543_Y	0.826	0.44
53_L	256_I	0.826	0.44
100_D	161_S	0.824	0.44
152_L	211_I	0.824	0.44
559_S	666_K	0.823	0.44
78_Q	324_I	0.823	0.44
584_P	667_L	0.823	0.44
588_V	673_S	0.822	0.44
234_A	237_N	0.821	0.43
486_P	644_V	0.821	0.43
258_R	438_L	0.819	0.43
168_I	324_I	0.819	0.43
561_Q	607_A	0.816	0.43
646_S	658_L	0.816	0.43
509_A	639_S	0.814	0.43
493_K	558_L	0.814	0.43
408_A	485_N	0.814	0.43
27_L	36_M	0.813	0.43
118_E	428_L	0.812	0.43
616_E	669_D	0.812	0.43
305_K	619_F	0.812	0.43
473_G	624_P	0.811	0.43
457_S	492_R	0.810	0.43
86_D	551_I	0.810	0.43
94_Y	141_N	0.810	0.43
113_K	231_R	0.807	0.42
466_P	593_Q	0.807	0.42
658_L	675_C	0.807	0.42
400_V	535_L	0.806	0.42
650_P	671_Q	0.804	0.42
254_D	260_V	0.802	0.42
590_I	697_F	0.802	0.42
55_S	256_I	0.801	0.42
30_L	291_A	0.799	0.42
105_I	215_A	0.797	0.42
419_V	478_M	0.797	0.42
218_P	649_N	0.796	0.42
584_P	666_K	0.795	0.41
372_G	392_Y	0.794	0.41
483_L	662_I	0.794	0.41
472_F	702_E	0.793	0.41
20_N	24_M	0.793	0.41
35_I	186_D	0.793	0.41
543_Y	562_L	0.793	0.41
369_A	390_I	0.792	0.41
140_V	152_L	0.792	0.41
297_F	391_Y	0.792	0.41
100_D	651_N	0.791	0.41
54_F	672_F	0.790	0.41
590_I	593_Q	0.790	0.41
62_Y	252_E	0.789	0.41
73_T	463_G	0.788	0.41
211_I	651_N	0.787	0.41
324_I	432_L	0.787	0.41
643_A	666_K	0.785	0.41
511_L	692_T	0.785	0.41
104_S	108_S	0.785	0.41
651_N	669_D	0.785	0.41
397_I	400_V	0.784	0.41
46_P	175_M	0.784	0.41
583_F	696_I	0.784	0.41
175_M	514_A	0.780	0.40
631_A	634_I	0.780	0.40
509_A	625_K	0.779	0.40
351_L	637_A	0.778	0.40
455_F	458_S	0.778	0.40
181_S	321_L	0.776	0.40
254_D	319_T	0.775	0.40
347_A	559_S	0.774	0.40
373_S	403_L	0.774	0.40
177_S	256_I	0.772	0.40
91_K	108_S	0.771	0.40
555_H	558_L	0.769	0.39
644_V	647_M	0.769	0.39
51_L	397_I	0.769	0.39
655_I	659_V	0.768	0.39
72_A	241_V	0.767	0.39
325_M	578_L	0.766	0.39
322_L	355_L	0.765	0.39
622_P	640_V	0.765	0.39
360_I	582_K	0.763	0.39
675_C	680_K	0.763	0.39
285_M	538_T	0.762	0.39
433_I	517_E	0.762	0.39
496_T	682_L	0.761	0.39
89_T	211_I	0.761	0.39
632_A	672_F	0.760	0.39
400_V	451_V	0.760	0.39
61_I	451_V	0.760	0.39
71_K	74_E	0.759	0.39
540_R	573_D	0.758	0.39
149_I	152_L	0.758	0.39
514_A	619_F	0.756	0.38
669_D	674_E	0.756	0.38
359_R	397_I	0.756	0.38
599_L	669_D	0.753	0.38
325_M	460_L	0.752	0.38
175_M	178_E	0.750	0.38
568_I	571_T	0.749	0.38
524_L	695_G	0.749	0.38
660_R	664_S	0.747	0.38
291_A	580_S	0.747	0.38
571_T	626_P	0.746	0.38
651_N	657_K	0.744	0.38
576_N	579_R	0.743	0.38
31_L	156_D	0.742	0.37
151_T	207_A	0.742	0.37
357_N	360_I	0.742	0.37
617_E	620_R	0.740	0.37
505_S	640_V	0.740	0.37
65_A	685_I	0.739	0.37
61_I	151_T	0.739	0.37
73_T	238_V	0.739	0.37
432_L	518_A	0.739	0.37
161_S	236_D	0.739	0.37
61_I	395_S	0.738	0.37
686_A	697_F	0.737	0.37
248_V	632_A	0.736	0.37
631_A	686_A	0.735	0.37
214_F	659_V	0.733	0.37
69_D	593_Q	0.733	0.37
115_S	118_E	0.731	0.37
195_L	421_F	0.731	0.37
660_R	683_D	0.730	0.37
56_V	60_T	0.729	0.36
73_T	234_A	0.727	0.36
270_L	479_R	0.727	0.36
494_I	581_Y	0.727	0.36
650_P	702_E	0.726	0.36
250_V	285_M	0.726	0.36
522_N	706_A	0.726	0.36
169_T	425_V	0.726	0.36
345_I	368_L	0.724	0.36
410_S	528_V	0.724	0.36
484_S	701_I	0.723	0.36
486_P	510_N	0.723	0.36
475_L	681_E	0.723	0.36
578_L	590_I	0.723	0.36
413_L	473_G	0.722	0.36
144_I	164_R	0.722	0.36
256_I	531_Y	0.721	0.36
258_R	262_R	0.720	0.36
30_L	331_F	0.720	0.36
495_L	554_P	0.720	0.36
36_M	632_A	0.719	0.36
78_Q	114_K	0.718	0.36
117_E	602_F	0.718	0.36
554_P	568_I	0.717	0.36
246_G	281_G	0.716	0.36
312_L	315_S	0.716	0.36
103_S	107_D	0.715	0.35
503_H	517_E	0.715	0.35
111_E	629_K	0.714	0.35
476_S	532_Y	0.714	0.35
324_I	456_A	0.709	0.35
198_N	556_D	0.708	0.35
318_T	345_I	0.708	0.35
49_L	261_Y	0.707	0.35
108_S	144_I	0.707	0.35
200_I	290_I	0.707	0.35
508_V	512_S	0.707	0.35
591_A	626_P	0.706	0.35
636_V	663_I	0.705	0.35
51_L	58_D	0.704	0.35
644_V	658_L	0.704	0.35
409_R	472_F	0.703	0.35
459_V	486_P	0.703	0.35
573_D	576_N	0.702	0.35
314_F	364_G	0.702	0.35
179_I	637_A	0.701	0.34
511_L	689_L	0.701	0.34
653_E	656_E	0.699	0.34
22_R	579_R	0.698	0.34
234_A	252_E	0.698	0.34
607_A	627_Q	0.697	0.34
492_R	517_E	0.697	0.34
173_T	194_E	0.697	0.34
216_I	243_I	0.695	0.34
75_E	78_Q	0.694	0.34
179_I	617_E	0.693	0.34
663_I	682_L	0.693	0.34
683_D	686_A	0.691	0.34
322_L	400_V	0.688	0.34
423_N	427_V	0.688	0.34
625_K	669_D	0.688	0.34
70_Q	425_V	0.685	0.33
476_S	658_L	0.685	0.33
290_I	457_S	0.684	0.33
239_Q	421_F	0.683	0.33
173_T	186_D	0.682	0.33
142_D	452_V	0.682	0.33
263_K	288_L	0.682	0.33
667_L	682_L	0.681	0.33
471_G	681_E	0.681	0.33
513_E	560_P	0.680	0.33
466_P	502_Y	0.679	0.33
88_Y	568_I	0.678	0.33
412_I	454_G	0.677	0.33
73_T	466_P	0.677	0.33
562_L	678_T	0.676	0.33
243_I	613_Q	0.675	0.33
491_L	494_I	0.675	0.33
107_D	581_Y	0.674	0.33
102_V	583_F	0.674	0.33
60_T	325_M	0.673	0.32
69_D	83_A	0.673	0.32
625_K	673_S	0.673	0.32
81_E	176_S	0.673	0.32
500_G	555_H	0.672	0.32
567_I	584_P	0.672	0.32
461_I	543_Y	0.671	0.32
591_A	636_V	0.670	0.32
470_T	502_Y	0.670	0.32
269_L	666_K	0.670	0.32
341_Y	538_T	0.670	0.32
94_Y	243_I	0.669	0.32
495_L	562_L	0.668	0.32
77_K	173_T	0.664	0.32
466_P	627_Q	0.664	0.32
554_P	646_S	0.664	0.32
84_V	234_A	0.664	0.32
87_Q	328_V	0.663	0.32
527_R	645_R	0.662	0.32
583_F	591_A	0.661	0.32
80_A	241_V	0.657	0.31
37_F	44_V	0.657	0.31
566_I	618_E	0.656	0.31
409_R	553_N	0.656	0.31
632_A	679_F	0.655	0.31
447_M	535_L	0.655	0.31
63_A	481_L	0.655	0.31
152_L	421_F	0.654	0.31
513_E	650_P	0.652	0.31
195_L	208_A	0.652	0.31
253_N	399_G	0.652	0.31
91_K	292_T	0.651	0.31
386_Y	685_I	0.650	0.31
25_H	29_Y	0.649	0.31
138_S	421_F	0.648	0.31
344_P	359_R	0.647	0.31
513_E	548_Q	0.647	0.31
69_D	243_I	0.646	0.31
456_A	679_F	0.645	0.31
94_Y	249_L	0.644	0.30
159_D	633_I	0.644	0.30
93_E	96_D	0.644	0.30
222_F	464_L	0.644	0.30
406_H	511_L	0.643	0.30
281_G	398_S	0.641	0.30
656_E	663_I	0.640	0.30
450_G	502_Y	0.640	0.30
403_L	455_F	0.640	0.30
508_V	567_I	0.640	0.30
156_D	159_D	0.639	0.30
354_L	402_F	0.639	0.30
69_D	409_R	0.638	0.30
67_V	581_Y	0.638	0.30
654_R	661_G	0.638	0.30
79_A	444_G	0.637	0.30
433_I	450_G	0.637	0.30
403_L	413_L	0.637	0.30
407_N	410_S	0.637	0.30
250_V	388_I	0.636	0.30
545_I	609_E	0.636	0.30
344_P	453_S	0.636	0.30
57_S	582_K	0.635	0.30
658_L	685_I	0.635	0.30
403_L	568_I	0.632	0.30
88_Y	455_F	0.632	0.30
475_L	591_A	0.632	0.30
367_I	680_K	0.632	0.30
109_I	116_S	0.631	0.30
192_E	634_I	0.631	0.30
93_E	209_T	0.631	0.30
239_Q	263_K	0.631	0.30
195_L	456_A	0.630	0.30
391_Y	423_N	0.630	0.30
477_T	481_L	0.630	0.30
295_Y	419_V	0.630	0.30
51_L	261_Y	0.627	0.29
440_G	587_L	0.627	0.29
475_L	567_I	0.626	0.29
559_S	633_I	0.626	0.29
558_L	577_M	0.626	0.29
466_P	507_M	0.626	0.29
595_H	693_L	0.625	0.29
31_L	158_E	0.625	0.29
185_S	191_V	0.625	0.29
507_M	554_P	0.624	0.29
104_S	107_D	0.623	0.29
692_T	695_G	0.623	0.29
192_E	213_R	0.622	0.29
423_N	516_C	0.621	0.29
283_L	667_L	0.621	0.29
524_L	606_K	0.620	0.29
140_V	634_I	0.620	0.29
302_Q	633_I	0.620	0.29
498_T	581_Y	0.619	0.29
283_L	421_F	0.619	0.29
350_I	361_A	0.619	0.29
553_N	556_D	0.619	0.29
567_I	606_K	0.618	0.29
46_P	523_G	0.617	0.29
535_L	591_A	0.617	0.29
247_Q	675_C	0.617	0.29
108_S	111_E	0.617	0.29
280_S	395_S	0.617	0.29
353_K	361_A	0.617	0.29
150_K	331_F	0.616	0.29
405_K	455_F	0.616	0.29
66_T	244_K	0.616	0.29
202_S	206_G	0.614	0.29
321_L	492_R	0.614	0.29
70_Q	80_A	0.613	0.28
49_L	59_K	0.613	0.28
495_L	503_H	0.613	0.28
193_K	280_S	0.612	0.28
234_A	243_I	0.612	0.28
54_F	258_R	0.612	0.28
387_V	396_G	0.612	0.28
361_A	696_I	0.611	0.28
313_L	588_V	0.611	0.28
97_N	225_K	0.611	0.28
63_A	680_K	0.610	0.28
395_S	461_I	0.610	0.28
279_I	415_T	0.610	0.28
183_K	558_L	0.610	0.28
214_F	425_V	0.610	0.28
24_M	27_L	0.609	0.28
572_T	701_I	0.609	0.28
486_P	527_R	0.608	0.28
325_M	372_G	0.607	0.28
309_Q	370_I	0.606	0.28
289_F	314_F	0.606	0.28
415_T	702_E	0.606	0.28
279_I	283_L	0.606	0.28
351_L	465_M	0.606	0.28
250_V	559_S	0.606	0.28
56_V	228_E	0.605	0.28
69_D	258_R	0.604	0.28
395_S	454_G	0.604	0.28
310_S	633_I	0.603	0.28
545_I	686_A	0.602	0.28
423_N	494_I	0.602	0.28
172_N	614_I	0.602	0.28
52_D	397_I	0.602	0.28
272_N	633_I	0.601	0.28
230_K	414_Q	0.600	0.28
259_E	492_R	0.600	0.28
540_R	554_P	0.600	0.28
676_D	680_K	0.599	0.28
224_P	582_K	0.599	0.28
94_Y	679_F	0.599	0.28
632_A	636_V	0.599	0.28
529_G	550_N	0.599	0.28
231_R	477_T	0.597	0.27
165_D	287_G	0.597	0.27
28_L	323_V	0.597	0.27
346_A	695_G	0.597	0.27
114_K	324_I	0.597	0.27
91_K	659_V	0.596	0.27
457_S	679_F	0.595	0.27
41_F	558_L	0.595	0.27
216_I	684_T	0.595	0.27
326_E	697_F	0.595	0.27
226_A	229_A	0.595	0.27
222_F	661_G	0.594	0.27
401_L	475_L	0.594	0.27
223_D	254_D	0.591	0.27
350_I	426_V	0.591	0.27
327_V	421_F	0.591	0.27
469_E	480_L	0.591	0.27
458_S	496_T	0.590	0.27
62_Y	399_G	0.589	0.27
290_I	342_L	0.589	0.27
417_L	448_L	0.589	0.27
448_L	452_V	0.588	0.27
270_L	351_L	0.588	0.27
46_P	64_P	0.588	0.27
67_V	270_L	0.588	0.27
503_H	507_M	0.586	0.27
374_M	589_D	0.586	0.27
359_R	415_T	0.585	0.27
35_I	193_K	0.585	0.27
406_H	411_K	0.584	0.27
496_T	503_H	0.584	0.27
355_L	389_G	0.584	0.27
417_L	675_C	0.584	0.27
299_K	313_L	0.584	0.27
115_S	367_I	0.583	0.27
62_Y	498_T	0.582	0.27
366_I	410_S	0.581	0.26
476_S	598_S	0.580	0.26
84_V	573_D	0.579	0.26
373_S	458_S	0.579	0.26
76_K	174_V	0.578	0.26
49_L	222_F	0.578	0.26
27_L	320_L	0.578	0.26
373_S	386_Y	0.577	0.26
458_S	513_E	0.576	0.26
67_V	268_G	0.576	0.26
89_T	207_A	0.576	0.26
470_T	495_L	0.575	0.26
56_V	223_D	0.574	0.26
238_V	520_G	0.574	0.26
493_K	512_S	0.574	0.26
150_K	237_N	0.573	0.26
389_G	602_F	0.573	0.26
299_K	581_Y	0.572	0.26
409_R	412_I	0.571	0.26
99_I	283_L	0.571	0.26
476_S	545_I	0.571	0.26
272_N	420_A	0.570	0.26
390_I	602_F	0.570	0.26
246_G	688_T	0.570	0.26
57_S	68_E	0.568	0.26
56_V	410_S	0.568	0.26
71_K	136_L	0.567	0.26
189_D	653_E	0.567	0.26
399_G	616_E	0.567	0.26
246_G	318_T	0.566	0.26
538_T	692_T	0.566	0.26
233_E	236_D	0.564	0.25
458_S	514_A	0.563	0.25
490_L	499_P	0.562	0.25
647_M	679_F	0.562	0.25
640_V	676_D	0.561	0.25
63_A	470_T	0.561	0.25
169_T	173_T	0.561	0.25
43_H	672_F	0.561	0.25
41_F	428_L	0.561	0.25
114_K	177_S	0.560	0.25
237_N	543_Y	0.559	0.25
74_E	79_A	0.558	0.25
481_L	691_A	0.557	0.25
212_G	705_E	0.557	0.25
102_V	171_V	0.557	0.25
295_Y	651_N	0.557	0.25
496_T	529_G	0.557	0.25
468_F	550_N	0.556	0.25
490_L	581_Y	0.556	0.25
217_I	251_E	0.556	0.25
61_I	313_L	0.555	0.25
111_E	158_E	0.554	0.25
579_R	587_L	0.554	0.25
293_L	345_I	0.554	0.25
145_S	610_K	0.552	0.25
494_I	566_I	0.552	0.25
576_N	676_D	0.552	0.25
193_K	651_N	0.552	0.25
592_E	595_H	0.551	0.25
43_H	647_M	0.550	0.25
219_N	454_G	0.550	0.25
89_T	668_Q	0.549	0.25
250_V	257_D	0.549	0.25
270_L	538_T	0.548	0.24
485_N	528_V	0.548	0.24
92_K	394_I	0.548	0.24
510_N	554_P	0.547	0.24
420_A	458_S	0.546	0.24
560_P	671_Q	0.545	0.24
528_V	606_K	0.545	0.24
28_L	272_N	0.545	0.24
281_G	510_N	0.544	0.24
81_E	237_N	0.544	0.24
217_I	249_L	0.542	0.24
75_E	205_L	0.542	0.24
422_I	619_F	0.541	0.24
54_F	358_E	0.541	0.24
90_L	94_Y	0.540	0.24
415_T	643_A	0.540	0.24
86_D	661_G	0.540	0.24
225_K	245_Q	0.540	0.24
30_L	150_K	0.540	0.24
116_S	657_K	0.539	0.24
113_K	153_L	0.538	0.24
372_G	633_I	0.538	0.24
557_K	701_I	0.537	0.24
451_V	632_A	0.537	0.24
88_Y	453_S	0.537	0.24
499_P	541_P	0.537	0.24
154_K	213_R	0.535	0.24
276_F	679_F	0.535	0.24
597_T	681_E	0.535	0.24
291_A	535_L	0.535	0.24
251_E	255_L	0.533	0.24
564_K	578_L	0.533	0.24
531_Y	552_D	0.533	0.24
644_V	665_D	0.532	0.24
57_S	593_Q	0.531	0.23
145_S	148_S	0.531	0.23
284_I	290_I	0.531	0.23
626_P	666_K	0.531	0.23
66_T	578_L	0.530	0.23
600_L	660_R	0.529	0.23
50_D	231_R	0.529	0.23
571_T	635_S	0.528	0.23
173_T	274_N	0.528	0.23
54_F	635_S	0.528	0.23
142_D	146_E	0.527	0.23
516_C	523_G	0.527	0.23
606_K	610_K	0.527	0.23
509_A	690_C	0.527	0.23
231_R	235_S	0.526	0.23
463_G	510_N	0.526	0.23
152_L	268_G	0.526	0.23
94_Y	136_L	0.525	0.23
62_Y	350_I	0.524	0.23
650_P	654_R	0.524	0.23
99_I	102_V	0.524	0.23
168_I	221_V	0.523	0.23
228_E	662_I	0.523	0.23
273_S	432_L	0.523	0.23
475_L	578_L	0.523	0.23
35_I	324_I	0.523	0.23
636_V	666_K	0.522	0.23
179_I	182_D	0.522	0.23
256_I	613_Q	0.522	0.23
291_A	295_Y	0.521	0.23
51_L	61_I	0.520	0.23
35_I	194_E	0.520	0.23
231_R	323_V	0.520	0.23
511_L	554_P	0.519	0.23
291_A	425_V	0.518	0.23
647_M	650_P	0.518	0.23
58_D	293_L	0.518	0.23
612_D	701_I	0.518	0.23
355_L	460_L	0.518	0.23
430_L	481_L	0.517	0.23
192_E	211_I	0.517	0.23
209_T	701_I	0.517	0.23
597_T	666_K	0.517	0.23
646_S	691_A	0.516	0.23
99_I	167_V	0.516	0.23
145_S	362_I	0.516	0.23
455_F	628_S	0.515	0.23
190_K	629_K	0.515	0.23
426_V	597_T	0.514	0.23
513_E	524_L	0.514	0.23
229_A	535_L	0.513	0.22
582_K	589_D	0.513	0.22
161_S	202_S	0.513	0.22
201_P	291_A	0.513	0.22
223_D	503_H	0.512	0.22
317_I	468_F	0.512	0.22
354_L	465_M	0.512	0.22
559_S	565_N	0.512	0.22
207_A	300_Q	0.512	0.22
354_L	701_I	0.511	0.22
284_I	447_M	0.511	0.22
265_E	417_L	0.511	0.22
102_V	540_R	0.509	0.22
277_K	448_L	0.509	0.22
370_I	678_T	0.508	0.22
509_A	705_E	0.508	0.22
102_V	647_M	0.508	0.22
657_K	686_A	0.508	0.22
593_Q	625_K	0.507	0.22
350_I	398_S	0.507	0.22
599_L	659_V	0.507	0.22
254_D	660_R	0.506	0.22
231_R	425_V	0.506	0.22
77_K	439_S	0.506	0.22
421_F	618_E	0.506	0.22
495_L	507_M	0.506	0.22
451_V	454_G	0.506	0.22
224_P	429_S	0.505	0.22
91_K	216_I	0.505	0.22
155_A	356_M	0.505	0.22
456_A	580_S	0.505	0.22
27_L	30_L	0.505	0.22
198_N	608_K	0.504	0.22
251_E	373_S	0.503	0.22
460_L	659_V	0.503	0.22
645_R	698_H	0.503	0.22
167_V	222_F	0.503	0.22
35_I	179_I	0.502	0.22
36_M	707_T	0.502	0.22
91_K	94_Y	0.502	0.22
183_K	577_M	0.502	0.22
466_P	513_E	0.501	0.22
571_T	578_L	0.501	0.22
250_V	263_K	0.501	0.22
454_G	675_C	0.501	0.22
503_H	701_I	0.501	0.22
376_F	682_L	0.500	0.22
107_D	170_A	0.500	0.22
339_I	413_L	0.500	0.22
156_D	428_L	0.500	0.22

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4s1bA	2	0.3094	100	0.788	Contact Map
3ljxA	1	0.3347	99.8	0.911	Contact Map
4r8zA	2	0.27	99.8	0.917	Contact Map
2ogiA	2	0.2714	99.7	0.92	Contact Map
3ccgA	2	0.263	99.7	0.921	Contact Map
2o08A	2	0.2588	99.7	0.923	Contact Map
4mcwA	2	0.4726	99.7	0.925	Contact Map
3hc1A	1	0.3783	99.6	0.931	Contact Map
3memA	1	0.5415	99.5	0.934	Contact Map
3tm8A	1	0.3952	99.4	0.936	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0163 seconds.