YQBK - BACSU - GREMLIN Contacts

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YQBK - Uncharacterized protein YqbK

UniProt:	P45927	Sequences: MNGGTFTPGKEKERAGIYFNFKTTAENRVSAGERGTVALPIASSWGEVKKFISISSIEDLNKKVGLNIDDPSLLLLREAMKKANTVLLYRLTEGLRASADISEGVKATALYGGTKGNDIIISITENVIDSSKVDVTTYLDQSEVDKQTVSKAEELKPNKYVTFTGKGDLTVTIPLTGTAPEDVSGALPATSGIRLSGGTDKTPTNADYTAFLEAAETEYFDTIALPVEDNEQLKATFVAFIKRLRDNQGQKVQGVLSNYKGDHEGIINVTGGVLLEDGTEITPEKATAWVAGASAGATFNQSLTFVEYEGAVDVLNRIDNDEIVERLSNGEFLFTYDSRDKSVSVEKDINSLTSLTAEKNKMFQKNKIVRVLDAINNDLTSQLKALIKSRKASGSDVPATNDGLQFVKTLITQYLSVLQDNEGITDFDSENDITIALNNDRDGFLIDLAVQPVDAAEKFYFNVEVK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	466 (420)
Sequences:	991 (852)
Seq/√Len:	41.6

BACSU - YQBK XKDK

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
375_I	450_V	5.289	1.00
407_V	444_F	4.506	1.00
342_S	346_E	4.433	1.00
38_A	211_F	4.021	1.00
78_E	289_W	3.355	1.00
400_T	422_E	3.081	1.00
426_D	451_Q	3.050	1.00
343_V	346_E	3.034	1.00
109_A	113_G	3.001	1.00
257_S	287_T	2.860	1.00
238_V	266_I	2.815	1.00
224_A	287_T	2.801	1.00
265_G	373_D	2.744	1.00
40_P	89_Y	2.672	1.00
375_I	418_L	2.634	1.00
456_A	459_F	2.592	1.00
293_A	308_Y	2.566	1.00
435_I	438_N	2.553	1.00
238_V	242_K	2.541	1.00
240_F	252_V	2.537	1.00
372_L	450_V	2.536	1.00
234_K	256_L	2.535	1.00
440_D	454_D	2.506	1.00
126_N	134_D	2.486	1.00
255_V	291_A	2.455	1.00
237_F	254_G	2.453	1.00
14_R	324_V	2.445	1.00
208_Y	237_F	2.400	1.00
211_F	214_A	2.396	1.00
253_Q	294_S	2.372	1.00
374_A	414_Y	2.280	1.00
241_I	254_G	2.238	1.00
159_K	164_T	2.226	1.00
39_L	86_V	2.222	1.00
52_I	64_V	2.164	0.99
216_E	243_R	2.130	0.99
240_F	244_L	2.128	0.99
161_V	165_G	2.091	0.99
288_A	292_G	2.082	0.99
379_L	411_I	2.081	0.99
21_F	369_V	2.062	0.99
164_T	167_G	2.030	0.99
399_A	404_L	2.019	0.99
424_I	450_V	2.009	0.99
308_Y	311_A	1.999	0.99
419_Q	424_I	1.977	0.99
350_N	457_E	1.964	0.99
398_P	455_A	1.959	0.99
47_E	50_K	1.957	0.99
14_R	346_E	1.943	0.99
253_Q	366_N	1.936	0.99
113_G	198_G	1.923	0.99
59_D	62_K	1.886	0.99
107_A	121_I	1.862	0.98
365_K	442_D	1.845	0.98
215_A	223_I	1.835	0.98
35_G	84_N	1.833	0.98
447_D	462_N	1.786	0.98
145_D	149_V	1.768	0.98
94_G	99_A	1.767	0.98
111_Y	115_K	1.762	0.98
14_R	320_N	1.759	0.98
152_A	162_T	1.753	0.98
204_T	207_D	1.733	0.97
36_T	85_T	1.713	0.97
134_D	148_T	1.703	0.97
113_G	117_N	1.702	0.97
76_L	86_V	1.700	0.97
428_D	431_N	1.691	0.97
113_G	116_G	1.687	0.97
245_R	373_D	1.686	0.97
151_K	154_E	1.679	0.97
368_I	452_P	1.656	0.97
133_V	145_D	1.644	0.96
47_E	63_K	1.639	0.96
45_W	115_K	1.619	0.96
160_Y	164_T	1.619	0.96
53_S	85_T	1.616	0.96
159_K	165_G	1.605	0.96
320_N	324_V	1.604	0.96
47_E	90_R	1.590	0.96
23_T	362_M	1.573	0.95
25_A	28_R	1.550	0.95
129_D	132_K	1.541	0.95
39_L	76_L	1.538	0.95
434_T	449_A	1.536	0.95
210_A	213_E	1.534	0.95
107_A	195_L	1.524	0.95
242_K	263_H	1.486	0.94
211_F	215_A	1.472	0.94
326_R	333_L	1.467	0.93
378_D	414_Y	1.449	0.93
144_V	147_Q	1.448	0.93
388_K	407_V	1.445	0.93
94_G	97_A	1.435	0.93
38_A	223_I	1.424	0.92
415_L	450_V	1.421	0.92
223_I	254_G	1.420	0.92
79_A	292_G	1.414	0.92
187_L	191_S	1.409	0.92
405_Q	408_K	1.391	0.91
223_I	240_F	1.390	0.91
159_K	162_T	1.378	0.91
293_A	345_V	1.360	0.91
20_N	462_N	1.346	0.90
319_D	322_E	1.340	0.90
257_S	298_T	1.332	0.90
268_N	351_S	1.327	0.89
93_E	101_I	1.317	0.89
363_F	372_L	1.312	0.89
13_E	324_V	1.311	0.89
157_P	167_G	1.310	0.89
38_A	215_A	1.305	0.89
434_T	447_D	1.304	0.89
414_Y	418_L	1.299	0.88
433_I	437_L	1.298	0.88
139_L	142_S	1.295	0.88
267_I	294_S	1.292	0.88
222_T	294_S	1.291	0.88
273_V	289_W	1.284	0.88
417_V	421_N	1.284	0.88
327_L	350_N	1.282	0.88
117_N	198_G	1.282	0.88
45_W	111_Y	1.276	0.87
21_F	376_N	1.273	0.87
188_P	191_S	1.268	0.87
158_N	161_V	1.268	0.87
350_N	365_K	1.249	0.86
21_F	337_D	1.248	0.86
434_T	439_N	1.237	0.86
122_S	138_Y	1.234	0.86
37_V	79_A	1.227	0.85
187_L	190_T	1.225	0.85
46_G	90_R	1.225	0.85
157_P	164_T	1.223	0.85
96_R	99_A	1.221	0.85
415_L	424_I	1.218	0.85
446_I	461_F	1.214	0.85
154_E	158_N	1.209	0.84
435_I	446_I	1.208	0.84
152_A	164_T	1.207	0.84
429_S	435_I	1.205	0.84
155_L	161_V	1.204	0.84
38_A	89_Y	1.202	0.84
186_A	190_T	1.199	0.84
418_L	421_N	1.197	0.84
159_K	163_F	1.191	0.84
17_I	459_F	1.186	0.83
49_K	89_Y	1.183	0.83
365_K	457_E	1.182	0.83
262_D	359_K	1.179	0.83
154_E	161_V	1.174	0.83
151_K	156_K	1.171	0.82
400_T	425_T	1.162	0.82
211_F	218_E	1.146	0.81
80_M	86_V	1.142	0.81
155_L	159_K	1.142	0.81
104_G	331_E	1.133	0.80
31_A	374_A	1.132	0.80
322_E	377_N	1.131	0.80
29_V	378_D	1.130	0.80
157_P	162_T	1.129	0.80
387_I	394_G	1.127	0.80
272_G	286_A	1.125	0.80
29_V	382_Q	1.121	0.80
226_P	257_S	1.120	0.80
143_E	146_K	1.117	0.79
255_V	294_S	1.115	0.79
432_D	436_A	1.113	0.79
186_A	189_A	1.109	0.79
327_L	365_K	1.106	0.79
159_K	166_K	1.101	0.78
231_E	235_A	1.100	0.78
292_G	296_G	1.098	0.78
367_K	398_P	1.098	0.78
374_A	378_D	1.089	0.78
189_A	193_I	1.089	0.78
158_N	164_T	1.082	0.77
124_T	136_T	1.081	0.77
35_G	221_D	1.070	0.76
95_L	99_A	1.058	0.75
332_F	345_V	1.056	0.75
138_Y	144_V	1.055	0.75
327_L	335_T	1.054	0.75
37_V	291_A	1.053	0.75
368_I	454_D	1.052	0.75
203_P	210_A	1.052	0.75
434_T	438_N	1.049	0.75
451_Q	455_A	1.044	0.75
136_T	143_E	1.037	0.74
286_A	334_F	1.036	0.74
448_L	461_F	1.029	0.73
14_R	327_L	1.029	0.73
130_S	204_T	1.028	0.73
418_L	423_G	1.024	0.73
211_F	217_T	1.024	0.73
31_A	414_Y	1.020	0.73
216_E	244_L	1.019	0.73
404_L	456_A	1.019	0.73
147_Q	150_S	1.015	0.72
305_F	365_K	1.015	0.72
415_L	448_L	1.014	0.72
155_L	158_N	1.011	0.72
432_D	435_I	1.009	0.72
207_D	366_N	1.008	0.72
287_T	298_T	1.003	0.71
149_V	152_A	0.999	0.71
302_S	394_G	0.998	0.71
119_I	152_A	0.995	0.71
106_K	212_L	0.994	0.71
46_G	113_G	0.992	0.71
119_I	138_Y	0.992	0.71
298_T	370_R	0.991	0.71
241_I	252_V	0.985	0.70
181_E	184_S	0.981	0.70
108_T	197_G	0.979	0.70
115_K	119_I	0.978	0.70
365_K	454_D	0.977	0.69
189_A	196_S	0.977	0.69
195_L	198_G	0.975	0.69
272_G	285_K	0.974	0.69
151_K	159_K	0.971	0.69
182_D	197_G	0.967	0.69
97_A	101_I	0.965	0.69
374_A	418_L	0.963	0.68
48_V	92_T	0.962	0.68
145_D	150_S	0.961	0.68
48_V	112_G	0.960	0.68
116_G	119_I	0.959	0.68
180_P	185_G	0.954	0.68
135_V	145_D	0.954	0.68
139_L	143_E	0.950	0.67
17_I	452_P	0.947	0.67
412_T	416_S	0.947	0.67
294_S	366_N	0.944	0.67
91_L	277_D	0.943	0.67
190_T	195_L	0.942	0.67
379_L	446_I	0.941	0.67
160_Y	163_F	0.940	0.66
136_T	141_Q	0.939	0.66
433_I	439_N	0.937	0.66
124_T	127_V	0.935	0.66
109_A	116_G	0.934	0.66
116_G	198_G	0.932	0.66
269_V	272_G	0.928	0.65
401_N	427_F	0.922	0.65
158_N	162_T	0.922	0.65
145_D	148_T	0.922	0.65
144_V	149_V	0.916	0.64
188_P	193_I	0.916	0.64
416_S	429_S	0.914	0.64
290_V	366_N	0.912	0.64
46_G	198_G	0.910	0.64
257_S	285_K	0.909	0.64
206_A	210_A	0.908	0.64
423_G	452_P	0.908	0.64
244_L	252_V	0.908	0.64
74_L	78_E	0.904	0.63
112_G	115_K	0.898	0.63
46_G	64_V	0.896	0.63
12_K	460_Y	0.895	0.63
216_E	240_F	0.895	0.63
74_L	277_D	0.895	0.63
387_I	456_A	0.893	0.62
407_V	456_A	0.891	0.62
353_T	359_K	0.890	0.62
442_D	455_A	0.889	0.62
427_F	432_D	0.888	0.62
323_I	333_L	0.885	0.62
152_A	155_L	0.882	0.61
398_P	456_A	0.880	0.61
150_S	153_E	0.877	0.61
119_I	139_L	0.877	0.61
147_Q	300_N	0.875	0.61
187_L	192_G	0.875	0.61
348_D	352_L	0.868	0.60
52_I	163_F	0.867	0.60
432_D	438_N	0.860	0.59
76_L	88_L	0.860	0.59
185_G	191_S	0.859	0.59
431_N	439_N	0.858	0.59
326_R	331_E	0.852	0.59
40_P	225_L	0.851	0.59
94_G	199_T	0.850	0.59
323_I	327_L	0.850	0.59
253_Q	267_I	0.849	0.59
35_G	378_D	0.847	0.58
114_T	200_D	0.844	0.58
54_I	80_M	0.843	0.58
17_I	40_P	0.843	0.58
70_D	231_E	0.843	0.58
76_L	80_M	0.841	0.58
105_V	110_L	0.837	0.57
152_A	163_F	0.835	0.57
323_I	335_T	0.835	0.57
137_T	145_D	0.834	0.57
13_E	328_S	0.833	0.57
126_N	129_D	0.832	0.57
83_A	86_V	0.830	0.57
267_I	332_F	0.829	0.57
144_V	388_K	0.828	0.57
14_R	323_I	0.827	0.56
291_A	422_E	0.827	0.56
396_D	399_A	0.826	0.56
332_F	396_D	0.826	0.56
290_V	345_V	0.825	0.56
236_T	319_D	0.825	0.56
93_E	99_A	0.821	0.56
156_K	161_V	0.821	0.56
69_D	197_G	0.820	0.56
138_Y	143_E	0.820	0.56
325_E	329_N	0.819	0.56
123_I	190_T	0.819	0.56
132_K	149_V	0.817	0.56
175_L	180_P	0.815	0.55
89_Y	211_F	0.814	0.55
103_E	108_T	0.813	0.55
298_T	327_L	0.809	0.55
93_E	97_A	0.809	0.55
261_G	315_L	0.805	0.54
184_S	191_S	0.803	0.54
427_F	433_I	0.801	0.54
388_K	394_G	0.800	0.54
107_A	123_I	0.800	0.54
203_P	208_Y	0.798	0.54
208_Y	228_E	0.797	0.54
375_I	415_L	0.796	0.54
349_I	365_K	0.792	0.53
223_I	459_F	0.791	0.53
375_I	414_Y	0.791	0.53
142_S	149_V	0.790	0.53
303_L	349_I	0.787	0.53
99_A	102_S	0.786	0.53
41_I	326_R	0.781	0.52
433_I	438_N	0.780	0.52
298_T	348_D	0.780	0.52
180_P	183_V	0.776	0.52
327_L	348_D	0.776	0.52
94_G	98_S	0.775	0.52
179_A	182_D	0.774	0.52
224_A	291_A	0.773	0.51
297_A	418_L	0.769	0.51
425_T	451_Q	0.761	0.50
82_K	292_G	0.759	0.50
205_N	233_L	0.758	0.50
127_V	135_V	0.755	0.50
35_G	79_A	0.754	0.50
270_T	318_I	0.752	0.50
433_I	442_D	0.749	0.49
313_D	444_F	0.748	0.49
17_I	456_A	0.748	0.49
256_L	415_L	0.747	0.49
339_R	344_S	0.746	0.49
155_L	164_T	0.746	0.49
419_Q	427_F	0.746	0.49
419_Q	426_D	0.745	0.49
382_Q	410_L	0.744	0.49
32_G	378_D	0.742	0.49
108_T	162_T	0.740	0.48
386_L	461_F	0.738	0.48
254_G	266_I	0.738	0.48
150_S	155_L	0.736	0.48
26_E	223_I	0.736	0.48
304_T	423_G	0.734	0.48
234_K	238_V	0.733	0.48
205_N	209_T	0.733	0.48
265_G	272_G	0.732	0.48
197_G	200_D	0.730	0.47
379_L	461_F	0.729	0.47
266_I	352_L	0.727	0.47
237_F	240_F	0.726	0.47
348_D	370_R	0.725	0.47
313_D	317_R	0.723	0.47
426_D	455_A	0.722	0.47
19_F	461_F	0.721	0.47
161_V	164_T	0.721	0.47
335_T	346_E	0.717	0.46
51_F	87_L	0.717	0.46
98_S	108_T	0.715	0.46
349_I	396_D	0.715	0.46
411_I	446_I	0.713	0.46
239_A	243_R	0.711	0.46
403_G	456_A	0.710	0.46
46_G	277_D	0.709	0.46
35_G	302_S	0.709	0.46
318_I	323_I	0.707	0.45
153_E	156_K	0.707	0.45
130_S	156_K	0.707	0.45
414_Y	448_L	0.706	0.45
436_A	447_D	0.705	0.45
187_L	194_R	0.704	0.45
99_A	117_N	0.702	0.45
133_V	138_Y	0.701	0.45
198_G	201_K	0.700	0.45
350_N	442_D	0.700	0.45
79_A	83_A	0.699	0.45
298_T	365_K	0.699	0.45
371_V	452_P	0.697	0.44
335_T	365_K	0.696	0.44
398_P	418_L	0.691	0.44
109_A	115_K	0.691	0.44
332_F	366_N	0.690	0.44
298_T	456_A	0.688	0.44
302_S	350_N	0.687	0.43
367_K	371_V	0.687	0.43
237_F	244_L	0.686	0.43
109_A	117_N	0.685	0.43
121_I	202_T	0.684	0.43
81_K	310_G	0.684	0.43
106_K	167_G	0.681	0.43
114_T	136_T	0.680	0.43
108_T	152_A	0.679	0.43
152_A	159_K	0.679	0.43
22_K	459_F	0.679	0.43
137_T	195_L	0.678	0.43
237_F	243_R	0.676	0.42
275_L	284_E	0.674	0.42
91_L	211_F	0.673	0.42
237_F	241_I	0.673	0.42
226_P	330_G	0.672	0.42
190_T	193_I	0.671	0.42
365_K	396_D	0.668	0.42
404_L	407_V	0.667	0.42
135_V	150_S	0.666	0.42
137_T	147_Q	0.665	0.41
221_D	373_D	0.664	0.41
371_V	453_V	0.664	0.41
332_F	369_V	0.662	0.41
143_E	182_D	0.661	0.41
451_Q	458_K	0.660	0.41
271_G	455_A	0.657	0.41
85_T	353_T	0.655	0.41
269_V	286_A	0.647	0.40
93_E	229_D	0.646	0.40
75_L	82_K	0.644	0.40
396_D	458_K	0.643	0.39
142_S	145_D	0.642	0.39
226_P	457_E	0.641	0.39
114_T	175_L	0.641	0.39
203_P	212_L	0.639	0.39
115_K	118_D	0.637	0.39
204_T	209_T	0.637	0.39
135_V	163_F	0.637	0.39
181_E	295_A	0.637	0.39
255_V	295_A	0.637	0.39
330_G	350_N	0.636	0.39
153_E	159_K	0.636	0.39
199_T	207_D	0.635	0.39
78_E	275_L	0.634	0.39
148_T	186_A	0.634	0.39
302_S	455_A	0.633	0.39
18_Y	398_P	0.633	0.39
114_T	129_D	0.633	0.39
327_L	333_L	0.632	0.39
190_T	197_G	0.629	0.38
103_E	153_E	0.628	0.38
129_D	196_S	0.628	0.38
410_L	413_Q	0.627	0.38
432_D	458_K	0.624	0.38
60_L	413_Q	0.624	0.38
150_S	154_E	0.624	0.38
307_E	332_F	0.622	0.38
191_S	199_T	0.622	0.38
180_P	189_A	0.621	0.38
62_K	375_I	0.621	0.38
198_G	203_P	0.619	0.37
258_N	268_N	0.618	0.37
433_I	436_A	0.618	0.37
100_D	121_I	0.618	0.37
136_T	145_D	0.617	0.37
272_G	388_K	0.615	0.37
163_F	255_V	0.614	0.37
416_S	433_I	0.613	0.37
143_E	147_Q	0.612	0.37
223_I	237_F	0.611	0.37
76_L	79_A	0.611	0.37
365_K	455_A	0.610	0.37
78_E	288_A	0.609	0.36
54_I	112_G	0.609	0.36
137_T	158_N	0.609	0.36
100_D	181_E	0.608	0.36
18_Y	460_Y	0.607	0.36
360_N	363_F	0.607	0.36
43_S	61_N	0.605	0.36
192_G	195_L	0.603	0.36
425_T	453_V	0.602	0.36
327_L	455_A	0.602	0.36
119_I	142_S	0.601	0.36
208_Y	406_F	0.600	0.36
40_P	253_Q	0.599	0.36
90_R	240_F	0.599	0.36
139_L	149_V	0.597	0.35
420_D	432_D	0.597	0.35
448_L	463_V	0.597	0.35
302_S	349_I	0.597	0.35
120_I	139_L	0.596	0.35
312_V	321_D	0.596	0.35
95_L	98_S	0.596	0.35
321_D	324_V	0.595	0.35
436_A	439_N	0.594	0.35
265_G	269_V	0.594	0.35
330_G	457_E	0.594	0.35
97_A	100_D	0.588	0.35
132_K	136_T	0.588	0.35
234_K	237_F	0.587	0.35
327_L	346_E	0.586	0.35
107_A	110_L	0.586	0.35
156_K	167_G	0.585	0.34
38_A	388_K	0.584	0.34
100_D	431_N	0.583	0.34
63_K	95_L	0.581	0.34
313_D	336_Y	0.581	0.34
215_A	254_G	0.579	0.34
127_V	155_L	0.578	0.34
371_V	418_L	0.577	0.34
167_G	231_E	0.577	0.34
434_T	437_L	0.576	0.34
222_T	253_Q	0.576	0.34
200_D	204_T	0.575	0.34
331_E	411_I	0.574	0.34
29_V	34_R	0.573	0.33
123_I	207_D	0.571	0.33
100_D	166_K	0.570	0.33
98_S	189_A	0.569	0.33
305_F	335_T	0.569	0.33
332_F	397_V	0.568	0.33
106_K	175_L	0.567	0.33
137_T	149_V	0.567	0.33
41_I	369_V	0.567	0.33
20_N	411_I	0.565	0.33
134_D	157_P	0.565	0.33
327_L	394_G	0.565	0.33
151_K	158_N	0.561	0.32
126_N	144_V	0.561	0.32
179_A	187_L	0.560	0.32
365_K	458_K	0.560	0.32
184_S	187_L	0.560	0.32
365_K	451_Q	0.558	0.32
58_E	62_K	0.558	0.32
63_K	186_A	0.557	0.32
254_G	415_L	0.557	0.32
181_E	185_G	0.556	0.32
108_T	120_I	0.556	0.32
306_V	349_I	0.554	0.32
303_L	348_D	0.554	0.32
125_E	134_D	0.553	0.32
142_S	146_K	0.553	0.32
368_I	371_V	0.552	0.32
121_I	137_T	0.551	0.32
106_K	120_I	0.551	0.32
137_T	175_L	0.550	0.32
43_S	73_L	0.550	0.32
359_K	372_L	0.550	0.32
64_V	88_L	0.547	0.31
328_S	404_L	0.547	0.31
303_L	306_V	0.546	0.31
17_I	307_E	0.545	0.31
117_N	196_S	0.544	0.31
135_V	138_Y	0.544	0.31
12_K	20_N	0.544	0.31
215_A	218_E	0.543	0.31
302_S	365_K	0.542	0.31
46_G	109_A	0.540	0.31
233_L	310_G	0.539	0.31
114_T	117_N	0.539	0.31
200_D	203_P	0.537	0.31
16_G	370_R	0.536	0.30
142_S	189_A	0.535	0.30
301_Q	305_F	0.534	0.30
141_Q	146_K	0.533	0.30
274_L	283_P	0.532	0.30
388_K	456_A	0.532	0.30
255_V	290_V	0.531	0.30
404_L	419_Q	0.530	0.30
212_L	222_T	0.530	0.30
239_A	266_I	0.529	0.30
320_N	335_T	0.528	0.30
234_K	245_R	0.527	0.30
116_G	183_V	0.527	0.30
152_A	161_V	0.526	0.30
184_S	190_T	0.526	0.30
435_I	439_N	0.523	0.29
257_S	327_L	0.523	0.29
41_I	51_F	0.522	0.29
83_A	302_S	0.522	0.29
348_D	442_D	0.521	0.29
181_E	197_G	0.520	0.29
188_P	192_G	0.520	0.29
14_R	380_T	0.520	0.29
54_I	118_D	0.519	0.29
184_S	375_I	0.519	0.29
372_L	452_P	0.518	0.29
122_S	136_T	0.518	0.29
123_I	135_V	0.517	0.29
175_L	181_E	0.516	0.29
51_F	214_A	0.516	0.29
411_I	416_S	0.516	0.29
32_G	62_K	0.515	0.29
229_D	322_E	0.515	0.29
267_I	366_N	0.514	0.29
365_K	404_L	0.514	0.29
106_K	204_T	0.513	0.29
243_R	255_V	0.513	0.29
403_G	442_D	0.512	0.29
15_A	396_D	0.512	0.29
209_T	215_A	0.512	0.29
121_I	296_G	0.511	0.28
133_V	150_S	0.510	0.28
23_T	406_F	0.509	0.28
160_Y	165_G	0.509	0.28
98_S	153_E	0.508	0.28
113_G	118_D	0.507	0.28
156_K	164_T	0.507	0.28
230_N	239_A	0.506	0.28
226_P	306_V	0.505	0.28
65_G	109_A	0.505	0.28
454_D	457_E	0.505	0.28
97_A	102_S	0.505	0.28
151_K	157_P	0.504	0.28
135_V	155_L	0.504	0.28
29_V	32_G	0.504	0.28
54_I	329_N	0.504	0.28
262_D	353_T	0.503	0.28
397_V	400_T	0.503	0.28
51_F	80_M	0.503	0.28
415_L	453_V	0.502	0.28
415_L	419_Q	0.502	0.28
296_G	332_F	0.502	0.28
401_N	439_N	0.501	0.28
106_K	191_S	0.500	0.28

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3hxlA	1	0.8863	100	0.288	Contact Map
3lmlA	1	0.9227	100	0.296	Contact Map
3j2mU	1	0.8498	100	0.309	Contact Map
3j9qA	8	0.7189	100	0.471	Contact Map
3foaA	1	0.5751	100	0.584	Contact Map
3fo8D	4	0.4077	18.3	0.972	Contact Map
1pnoA	1	0.3691	11.6	0.975	Contact Map
4hrzA	2	0.2253	11.1	0.975	Contact Map
3qdsA	4	0.2339	9.2	0.976	Contact Map
2ofcA	4	0.2339	7.6	0.977	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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