PTMCB - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

PTMCB - PTS system mannitol-specific EIICB component

UniProt:	P42956	Sequences: MQQQEQQQGGMKVKVQRFGSYLSGMIMPNIGAFIAWGIITALFIPAGWFPNEQLNTLVSPMITYLLPLLIAYTGGKMIYDHRGGVVGATAAIGVIVGSDIPMFLGAMIMGPLGGYLIKQTDKLFKDKVKQGFEMLINNFTAGIVGAALTILAFYAIGPVVLTLNKLLAAGVEVIVHANLLPVASVFVEPAKVLFLNNAINHGILSPIGIEQASQTGKSILFLVEANPGPGLGILLAYMFFGKGSSKSTAPGAAIIHFFGGIHEIYFPYILMKPALILAAIAGGASGLLTFTIFNAGLVAAASPGSIIALMAMTPRGGYFGVLAGVLVAAAVSFIVSAVILKSSKASEEDLAAATEKMQSMKGKKSQAAAALEAEQAKAEEASELSPESVNKIIFACDAGMGSSAMGASILRNKVKKAELDISVTNTAINNLPSDADIVITHKDLTDRAKAKLPNATHISVDNFLNSPKYDELIEKLKK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	478 (458)
Sequences:	569 (349)
Seq/√Len:	16.3

ECOLI - PTMCB PTM3C
BACSU - PTMCB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
285_S	327_V	5.980	1.00
281_A	335_V	5.675	1.00
233_I	279_A	5.250	1.00
187_V	223_V	4.773	1.00
290_F	324_G	4.613	1.00
59_S	63_T	4.557	1.00
187_V	204_L	4.030	1.00
412_N	416_K	3.960	1.00
71_A	91_A	3.906	1.00
184_S	284_A	3.824	1.00
119_Q	122_K	3.612	1.00
222_L	309_L	3.520	1.00
120_T	124_F	3.496	0.99
445_T	459_S	3.387	0.99
295_A	321_V	3.370	0.99
184_S	287_L	3.353	0.99
54_L	150_I	3.294	0.99
192_V	269_I	3.243	0.99
293_F	320_G	3.190	0.99
391_K	434_D	3.133	0.99
310_M	322_L	3.119	0.99
278_A	336_S	3.107	0.99
290_F	295_A	3.041	0.99
116_L	144_V	2.986	0.98
42_L	49_F	2.980	0.98
86_V	141_A	2.909	0.98
362_G	365_S	2.817	0.98
172_E	176_H	2.763	0.97
274_A	339_I	2.758	0.97
456_T	475_K	2.666	0.97
113_G	117_I	2.636	0.96
254_I	258_F	2.628	0.96
289_T	327_V	2.627	0.96
204_L	223_V	2.617	0.96
120_T	144_V	2.609	0.96
313_T	318_Y	2.530	0.95
72_Y	76_K	2.505	0.95
225_A	309_L	2.494	0.95
392_I	414_V	2.431	0.94
44_I	58_V	2.306	0.92
362_G	366_Q	2.306	0.92
225_A	301_A	2.250	0.91
57_L	96_V	2.192	0.90
445_T	457_H	2.185	0.90
334_I	338_V	2.174	0.90
301_A	309_L	2.159	0.90
330_A	334_I	2.156	0.89
295_A	320_G	2.125	0.89
272_K	343_S	2.045	0.87
38_I	146_A	2.043	0.87
468_K	471_E	2.000	0.85
250_P	253_A	1.978	0.85
205_S	300_A	1.972	0.85
192_V	279_A	1.967	0.84
76_K	81_H	1.923	0.83
185_V	280_I	1.914	0.83
24_G	77_M	1.913	0.83
114_G	117_I	1.896	0.82
72_Y	81_H	1.889	0.82
357_M	360_M	1.885	0.82
295_A	317_G	1.846	0.80
276_I	279_A	1.843	0.80
310_M	318_Y	1.843	0.80
437_I	472_L	1.814	0.79
338_V	342_S	1.809	0.79
46_A	302_S	1.774	0.78
277_L	281_A	1.769	0.77
33_F	66_L	1.758	0.77
310_M	313_T	1.757	0.77
256_H	329_A	1.736	0.76
354_T	357_M	1.730	0.76
143_I	147_A	1.723	0.75
414_V	419_L	1.711	0.75
130_Q	408_S	1.692	0.74
54_L	154_Y	1.678	0.73
358_Q	365_S	1.674	0.73
86_V	117_I	1.672	0.73
389_V	437_I	1.668	0.73
90_A	109_M	1.662	0.73
173_V	177_A	1.660	0.73
275_L	336_S	1.637	0.72
225_A	300_A	1.631	0.71
417_A	473_I	1.599	0.70
432_P	435_A	1.568	0.68
66_L	103_F	1.556	0.68
109_M	152_A	1.554	0.67
363_K	366_Q	1.548	0.67
350_L	353_A	1.544	0.67
293_F	323_A	1.533	0.66
269_I	279_A	1.530	0.66
317_G	320_G	1.519	0.66
233_I	275_L	1.505	0.65
466_S	469_Y	1.477	0.63
205_S	209_I	1.466	0.63
87_G	113_G	1.453	0.62
425_N	457_H	1.446	0.62
284_A	287_L	1.439	0.61
39_I	57_L	1.432	0.61
45_P	52_E	1.431	0.61
410_L	469_Y	1.425	0.60
209_I	221_F	1.409	0.60
80_D	84_G	1.409	0.60
86_V	113_G	1.407	0.59
168_A	203_I	1.389	0.58
350_L	361_K	1.377	0.58
120_T	140_T	1.363	0.57
409_I	464_L	1.360	0.57
318_Y	322_L	1.353	0.56
339_I	342_S	1.346	0.56
53_Q	154_Y	1.343	0.56
12_K	364_K	1.336	0.55
238_M	253_A	1.331	0.55
207_I	269_I	1.331	0.55
464_L	472_L	1.306	0.54
437_I	458_I	1.296	0.53
413_K	470_D	1.285	0.52
306_I	325_V	1.284	0.52
364_K	367_A	1.283	0.52
79_Y	114_G	1.279	0.52
238_M	250_P	1.270	0.52
221_F	299_A	1.266	0.51
354_T	368_A	1.256	0.51
186_F	203_I	1.249	0.50
222_L	321_V	1.249	0.50
222_L	225_A	1.248	0.50
233_I	269_I	1.248	0.50
79_Y	123_L	1.246	0.50
14_K	17_R	1.245	0.50
253_A	258_F	1.239	0.50
209_I	213_S	1.235	0.50
362_G	367_A	1.231	0.49
200_N	205_S	1.216	0.48
192_V	276_I	1.214	0.48
20_S	460_V	1.204	0.48
298_V	315_R	1.203	0.48
81_H	84_G	1.202	0.48
316_G	322_L	1.188	0.47
357_M	364_K	1.183	0.46
135_L	200_N	1.181	0.46
469_Y	473_I	1.177	0.46
18_F	21_Y	1.172	0.46
425_N	459_S	1.167	0.46
414_V	425_N	1.167	0.46
100_I	160_V	1.158	0.45
20_S	220_L	1.158	0.45
208_G	221_F	1.157	0.45
52_E	56_T	1.150	0.45
233_I	336_S	1.140	0.44
201_H	205_S	1.140	0.44
414_V	423_V	1.129	0.43
237_Y	272_K	1.126	0.43
324_G	394_F	1.121	0.43
316_G	324_G	1.107	0.42
410_L	413_K	1.105	0.42
13_V	446_D	1.104	0.42
354_T	365_S	1.099	0.42
147_A	151_L	1.096	0.41
89_T	145_G	1.092	0.41
366_Q	369_A	1.091	0.41
86_V	460_V	1.090	0.41
72_Y	84_G	1.090	0.41
38_I	143_I	1.079	0.40
113_G	147_A	1.074	0.40
12_K	419_L	1.068	0.40
175_V	211_Q	1.066	0.40
43_F	47_G	1.066	0.40
413_K	466_S	1.065	0.40
286_G	328_A	1.064	0.40
431_L	435_A	1.063	0.40
31_G	138_N	1.061	0.39
68_L	92_I	1.060	0.39
358_Q	362_G	1.060	0.39
414_V	476_L	1.058	0.39
214_Q	225_A	1.048	0.39
53_Q	153_F	1.047	0.39
350_L	354_T	1.046	0.39
152_A	186_F	1.045	0.39
188_E	230_G	1.043	0.38
349_D	352_A	1.040	0.38
272_K	340_L	1.037	0.38
174_I	177_A	1.037	0.38
425_N	445_T	1.030	0.38
412_N	465_N	1.029	0.38
48_W	310_M	1.028	0.38
358_Q	367_A	1.025	0.37
299_A	312_M	1.021	0.37
358_Q	363_K	1.021	0.37
293_F	317_G	1.015	0.37
460_V	468_K	1.013	0.37
33_F	101_P	1.011	0.37
17_R	415_K	1.006	0.36
164_N	210_E	1.002	0.36
188_E	227_P	0.999	0.36
427_A	430_N	0.996	0.36
225_A	290_F	0.992	0.36
277_L	284_A	0.990	0.36
269_I	437_I	0.985	0.35
309_L	313_T	0.984	0.35
77_M	421_I	0.984	0.35
425_N	428_I	0.982	0.35
409_I	473_I	0.977	0.35
27_M	201_H	0.974	0.35
40_T	55_N	0.974	0.35
340_L	344_K	0.971	0.35
150_I	154_Y	0.967	0.34
230_G	262_H	0.966	0.34
23_S	406_G	0.965	0.34
207_I	210_E	0.962	0.34
432_P	454_N	0.960	0.34
40_T	97_G	0.958	0.34
280_I	284_A	0.958	0.34
32_A	85_V	0.957	0.34
200_N	463_F	0.957	0.34
178_N	431_L	0.950	0.33
86_V	114_G	0.949	0.33
358_Q	366_Q	0.948	0.33
353_A	361_K	0.947	0.33
257_F	325_V	0.944	0.33
227_P	230_G	0.943	0.33
12_K	366_Q	0.942	0.33
187_V	224_E	0.942	0.33
425_N	463_F	0.940	0.33
413_K	469_Y	0.939	0.33
171_V	183_A	0.939	0.33
183_A	284_A	0.938	0.33
317_G	321_V	0.938	0.33
65_L	88_A	0.933	0.33
30_I	268_Y	0.931	0.32
417_A	469_Y	0.930	0.32
307_I	311_A	0.930	0.32
26_I	89_T	0.928	0.32
285_S	293_F	0.927	0.32
117_I	141_A	0.924	0.32
27_M	200_N	0.920	0.32
223_V	287_L	0.917	0.32
127_K	413_K	0.911	0.31
57_L	153_F	0.910	0.31
314_P	317_G	0.909	0.31
188_E	262_H	0.905	0.31
128_V	137_N	0.904	0.31
279_A	283_G	0.894	0.31
73_T	81_H	0.894	0.31
290_F	321_V	0.892	0.31
185_V	323_A	0.889	0.30
20_S	23_S	0.886	0.30
354_T	364_K	0.883	0.30
313_T	337_A	0.883	0.30
124_F	127_K	0.881	0.30
227_P	262_H	0.879	0.30
365_S	369_A	0.877	0.30
391_K	422_S	0.875	0.30
24_G	460_V	0.873	0.30
117_I	120_T	0.872	0.30
132_F	254_I	0.871	0.29
114_G	148_L	0.869	0.29
393_I	422_S	0.865	0.29
90_A	113_G	0.862	0.29
100_I	207_I	0.862	0.29
183_A	187_V	0.859	0.29
74_G	77_M	0.856	0.29
272_K	468_K	0.853	0.29
445_T	449_K	0.852	0.29
178_N	307_I	0.850	0.28
241_G	245_S	0.850	0.28
339_I	415_K	0.848	0.28
191_K	227_P	0.848	0.28
47_G	50_P	0.848	0.28
439_I	445_T	0.847	0.28
285_S	331_V	0.846	0.28
313_T	320_G	0.846	0.28
43_F	50_P	0.846	0.28
409_I	469_Y	0.845	0.28
283_G	286_G	0.844	0.28
39_I	101_P	0.843	0.28
439_I	472_L	0.842	0.28
53_Q	56_T	0.842	0.28
103_F	132_F	0.842	0.28
68_L	192_V	0.838	0.28
241_G	340_L	0.837	0.28
288_L	292_I	0.835	0.28
231_L	253_A	0.835	0.28
439_I	476_L	0.832	0.28
39_I	55_N	0.831	0.28
293_F	321_V	0.831	0.28
117_I	144_V	0.830	0.28
30_I	34_I	0.830	0.28
442_K	461_D	0.825	0.27
313_T	321_V	0.822	0.27
188_E	191_K	0.821	0.27
71_A	95_I	0.815	0.27
237_Y	461_D	0.814	0.27
132_F	258_F	0.812	0.27
327_V	330_A	0.811	0.27
317_G	324_G	0.811	0.27
272_K	344_K	0.810	0.27
220_L	272_K	0.809	0.27
278_A	335_V	0.809	0.27
448_A	453_P	0.808	0.27
464_L	468_K	0.807	0.26
358_Q	369_A	0.804	0.26
233_I	329_A	0.802	0.26
163_L	325_V	0.802	0.26
51_N	55_N	0.801	0.26
159_V	389_V	0.800	0.26
245_S	300_A	0.797	0.26
339_I	460_V	0.796	0.26
285_S	330_A	0.795	0.26
163_L	167_L	0.792	0.26
120_T	365_S	0.791	0.26
9_G	14_K	0.791	0.26
210_E	220_L	0.789	0.26
275_L	278_A	0.786	0.26
31_G	256_H	0.785	0.25
410_L	473_I	0.783	0.25
147_A	390_N	0.782	0.25
433_S	454_N	0.781	0.25
187_V	287_L	0.779	0.25
235_L	329_A	0.779	0.25
323_A	327_V	0.779	0.25
210_E	214_Q	0.779	0.25
79_Y	117_I	0.773	0.25
122_K	125_K	0.773	0.25
144_V	149_T	0.772	0.25
80_D	109_M	0.771	0.25
411_R	446_D	0.771	0.25
191_K	230_G	0.770	0.25
35_A	89_T	0.769	0.25
9_G	192_V	0.769	0.25
114_G	174_I	0.768	0.25
151_L	155_A	0.768	0.25
125_K	432_P	0.767	0.25
208_G	219_I	0.763	0.25
79_Y	144_V	0.762	0.24
109_M	112_L	0.761	0.24
169_A	203_I	0.760	0.24
33_F	63_T	0.760	0.24
313_T	319_F	0.759	0.24
165_K	307_I	0.758	0.24
301_A	307_I	0.753	0.24
108_I	335_V	0.752	0.24
413_K	417_A	0.751	0.24
233_I	332_S	0.750	0.24
258_F	307_I	0.750	0.24
13_V	20_S	0.749	0.24
12_K	242_K	0.747	0.24
58_V	278_A	0.747	0.24
292_I	349_D	0.744	0.24
307_I	312_M	0.743	0.24
299_A	324_G	0.741	0.24
26_I	460_V	0.740	0.24
348_E	411_R	0.736	0.23
431_L	460_V	0.736	0.23
100_I	280_I	0.734	0.23
290_F	323_A	0.733	0.23
337_A	359_S	0.732	0.23
340_L	343_S	0.730	0.23
57_L	289_T	0.729	0.23
222_L	409_I	0.727	0.23
15_V	78_I	0.726	0.23
209_I	299_A	0.726	0.23
437_I	456_T	0.726	0.23
156_I	327_V	0.726	0.23
186_F	390_N	0.725	0.23
84_G	362_G	0.724	0.23
253_A	269_I	0.724	0.23
191_K	262_H	0.723	0.23
21_Y	77_M	0.722	0.23
200_N	225_A	0.721	0.23
46_A	308_A	0.720	0.23
321_V	471_E	0.720	0.23
34_I	268_Y	0.717	0.23
71_A	88_A	0.716	0.23
48_W	315_R	0.714	0.22
290_F	309_L	0.713	0.22
56_T	154_Y	0.713	0.22
11_M	18_F	0.713	0.22
432_P	472_L	0.713	0.22
115_Y	292_I	0.712	0.22
127_K	392_I	0.712	0.22
40_T	101_P	0.712	0.22
27_M	463_F	0.712	0.22
293_F	319_F	0.712	0.22
224_E	264_I	0.711	0.22
421_I	437_I	0.711	0.22
285_S	289_T	0.710	0.22
183_A	288_L	0.707	0.22
200_N	224_E	0.704	0.22
39_I	146_A	0.702	0.22
79_Y	124_F	0.702	0.22
80_D	112_L	0.701	0.22
427_A	451_K	0.701	0.22
51_N	315_R	0.700	0.22
436_D	471_E	0.700	0.22
314_P	322_L	0.700	0.22
143_I	270_L	0.700	0.22
33_F	54_L	0.699	0.22
309_L	329_A	0.699	0.22
124_F	144_V	0.698	0.22
130_Q	258_F	0.698	0.22
225_A	316_G	0.695	0.22
466_S	473_I	0.695	0.22
59_S	308_A	0.693	0.22
309_L	324_G	0.693	0.22
38_I	439_I	0.692	0.22
25_M	28_P	0.690	0.21
458_I	475_K	0.690	0.21
339_I	343_S	0.688	0.21
48_W	258_F	0.688	0.21
440_T	459_S	0.687	0.21
389_V	455_A	0.687	0.21
122_K	246_K	0.686	0.21
12_K	365_S	0.684	0.21
159_V	352_A	0.684	0.21
320_G	443_D	0.683	0.21
279_A	332_S	0.683	0.21
242_K	354_T	0.682	0.21
321_V	458_I	0.681	0.21
209_I	310_M	0.679	0.21
167_L	186_F	0.679	0.21
182_V	284_A	0.679	0.21
159_V	163_L	0.679	0.21
358_Q	364_K	0.678	0.21
410_L	466_S	0.678	0.21
309_L	314_P	0.677	0.21
231_L	256_H	0.677	0.21
328_A	332_S	0.677	0.21
167_L	199_I	0.676	0.21
31_G	120_T	0.671	0.21
461_D	466_S	0.671	0.21
429_N	466_S	0.670	0.21
219_I	324_G	0.669	0.21
70_I	198_A	0.669	0.21
242_K	392_I	0.667	0.21
112_L	115_Y	0.666	0.21
292_I	390_N	0.665	0.21
302_S	464_L	0.664	0.20
160_V	286_G	0.664	0.20
154_Y	192_V	0.664	0.20
84_G	126_D	0.664	0.20
448_A	463_F	0.662	0.20
425_N	439_I	0.661	0.20
246_K	391_K	0.660	0.20
48_W	298_V	0.659	0.20
186_F	249_A	0.659	0.20
102_M	447_R	0.658	0.20
339_I	462_N	0.657	0.20
363_K	369_A	0.657	0.20
288_L	291_T	0.656	0.20
9_G	207_I	0.656	0.20
108_I	127_K	0.655	0.20
126_D	129_K	0.655	0.20
222_L	465_N	0.653	0.20
309_L	325_V	0.653	0.20
58_V	308_A	0.652	0.20
201_H	300_A	0.652	0.20
413_K	473_I	0.651	0.20
212_A	215_T	0.650	0.20
217_K	317_G	0.650	0.20
43_F	48_W	0.649	0.20
159_V	437_I	0.649	0.20
222_L	431_L	0.647	0.20
410_L	429_N	0.644	0.20
284_A	331_V	0.644	0.20
354_T	358_Q	0.644	0.20
13_V	409_I	0.643	0.20
71_A	152_A	0.642	0.20
31_G	157_G	0.642	0.20
435_A	452_L	0.642	0.20
223_V	394_F	0.641	0.20
246_K	421_I	0.641	0.20
174_I	208_G	0.639	0.20
104_L	306_I	0.639	0.20
12_K	209_I	0.636	0.19
412_N	452_L	0.636	0.19
25_M	36_W	0.635	0.19
425_N	431_L	0.635	0.19
433_S	437_I	0.634	0.19
44_I	308_A	0.632	0.19
55_N	101_P	0.631	0.19
290_F	298_V	0.631	0.19
161_L	164_N	0.630	0.19
147_A	150_I	0.630	0.19
421_I	464_L	0.630	0.19
356_K	360_M	0.627	0.19
223_V	290_F	0.626	0.19
124_F	136_I	0.625	0.19
52_E	55_N	0.620	0.19
120_T	211_Q	0.619	0.19
15_V	394_F	0.619	0.19
223_V	299_A	0.619	0.19
82_R	139_F	0.618	0.19
222_L	301_A	0.618	0.19
391_K	439_I	0.617	0.19
61_M	89_T	0.616	0.19
71_A	87_G	0.615	0.19
108_I	210_E	0.614	0.19
20_S	461_D	0.614	0.19
72_Y	223_V	0.614	0.19
364_K	369_A	0.613	0.19
186_F	269_I	0.613	0.19
276_I	436_D	0.612	0.19
208_G	269_I	0.612	0.19
44_I	50_P	0.611	0.19
458_I	472_L	0.611	0.19
384_L	392_I	0.610	0.18
20_S	412_N	0.609	0.18
78_I	123_L	0.608	0.18
140_T	251_G	0.607	0.18
424_T	461_D	0.607	0.18
98_S	161_L	0.606	0.18
28_P	36_W	0.605	0.18
440_T	445_T	0.605	0.18
357_M	366_Q	0.602	0.18
242_K	343_S	0.602	0.18
56_T	61_M	0.601	0.18
29_N	93_G	0.600	0.18
233_I	277_L	0.600	0.18
185_V	284_A	0.599	0.18
169_A	185_V	0.599	0.18
54_L	153_F	0.599	0.18
171_V	224_E	0.598	0.18
443_D	460_V	0.596	0.18
214_Q	380_E	0.595	0.18
220_L	408_S	0.594	0.18
207_I	220_L	0.591	0.18
458_I	467_P	0.591	0.18
167_L	435_A	0.591	0.18
174_I	183_A	0.589	0.18
295_A	322_L	0.589	0.18
355_E	416_K	0.587	0.18
420_D	449_K	0.586	0.18
20_S	339_I	0.585	0.18
174_I	290_F	0.585	0.18
203_I	462_N	0.585	0.18
357_M	368_A	0.584	0.18
237_Y	271_M	0.583	0.18
190_A	233_I	0.583	0.18
411_R	425_N	0.583	0.18
128_V	239_F	0.583	0.18
103_F	438_V	0.582	0.18
286_G	459_S	0.581	0.17
253_A	340_L	0.580	0.17
20_S	240_F	0.580	0.17
13_V	411_R	0.576	0.17
409_I	466_S	0.576	0.17
411_R	431_L	0.576	0.17
20_S	427_A	0.576	0.17
428_I	457_H	0.575	0.17
258_F	380_E	0.574	0.17
147_A	452_L	0.573	0.17
117_I	414_V	0.572	0.17
120_T	145_G	0.572	0.17
13_V	429_N	0.570	0.17
175_V	287_L	0.570	0.17
45_P	437_I	0.570	0.17
314_P	318_Y	0.570	0.17
167_L	439_I	0.569	0.17
220_L	410_L	0.569	0.17
270_L	360_M	0.569	0.17
147_A	383_E	0.568	0.17
94_V	105_G	0.567	0.17
275_L	463_F	0.564	0.17
124_F	321_V	0.564	0.17
79_Y	409_I	0.563	0.17
428_I	451_K	0.562	0.17
77_M	84_G	0.562	0.17
109_M	151_L	0.560	0.17
278_A	337_A	0.560	0.17
407_A	425_N	0.559	0.17
38_I	270_L	0.559	0.17
141_A	149_T	0.558	0.17
17_R	164_N	0.558	0.17
17_R	418_E	0.557	0.17
446_D	449_K	0.557	0.17
101_P	193_L	0.557	0.17
98_S	155_A	0.557	0.17
114_G	347_E	0.556	0.17
148_L	476_L	0.556	0.17
238_M	256_H	0.556	0.17
123_L	169_A	0.555	0.17
278_A	321_V	0.555	0.17
12_K	414_V	0.555	0.17
79_Y	460_V	0.554	0.17
205_S	220_L	0.554	0.17
13_V	461_D	0.553	0.17
341_K	404_A	0.552	0.17
162_T	166_L	0.550	0.16
62_I	101_P	0.549	0.16
408_S	460_V	0.549	0.16
96_V	101_P	0.549	0.16
295_A	324_G	0.548	0.16
357_M	363_K	0.548	0.16
71_A	154_Y	0.548	0.16
15_V	336_S	0.546	0.16
61_M	68_L	0.545	0.16
96_V	100_I	0.545	0.16
17_R	421_I	0.545	0.16
29_N	73_T	0.544	0.16
410_L	439_I	0.544	0.16
393_I	435_A	0.544	0.16
33_F	138_N	0.543	0.16
38_I	212_A	0.543	0.16
78_I	84_G	0.542	0.16
119_Q	415_K	0.540	0.16
191_K	286_G	0.540	0.16
311_A	314_P	0.538	0.16
116_L	151_L	0.538	0.16
103_F	152_A	0.538	0.16
103_F	418_E	0.537	0.16
20_S	429_N	0.537	0.16
297_L	301_A	0.537	0.16
173_V	441_H	0.537	0.16
157_G	425_N	0.536	0.16
396_C	402_S	0.535	0.16
396_C	399_G	0.535	0.16
399_G	402_S	0.535	0.16
281_A	338_V	0.534	0.16
438_V	455_A	0.534	0.16
24_G	146_A	0.534	0.16
280_I	293_F	0.534	0.16
127_K	148_L	0.532	0.16
155_A	159_V	0.531	0.16
219_I	244_S	0.531	0.16
61_M	101_P	0.531	0.16
156_I	193_L	0.530	0.16
62_I	211_Q	0.530	0.16
209_I	307_I	0.530	0.16
151_L	156_I	0.530	0.16
124_F	312_M	0.529	0.16
87_G	411_R	0.528	0.16
46_A	56_T	0.528	0.16
307_I	441_H	0.527	0.16
393_I	424_T	0.527	0.16
386_P	456_T	0.527	0.16
56_T	323_A	0.526	0.16
100_I	164_N	0.526	0.16
77_M	300_A	0.525	0.16
116_L	274_A	0.525	0.16
76_K	80_D	0.525	0.16
126_D	247_S	0.524	0.16
88_A	335_V	0.524	0.16
314_P	323_A	0.524	0.16
207_I	437_I	0.523	0.16
256_H	309_L	0.523	0.16
220_L	466_S	0.522	0.16
10_G	474_E	0.522	0.16
22_L	74_G	0.521	0.16
359_S	420_D	0.521	0.16
81_H	436_D	0.520	0.16
362_G	412_N	0.520	0.16
99_D	154_Y	0.520	0.16
20_S	468_K	0.519	0.15
258_F	280_I	0.518	0.15
356_K	419_L	0.518	0.15
175_V	183_A	0.517	0.15
55_N	391_K	0.517	0.15
119_Q	151_L	0.517	0.15
238_M	245_S	0.517	0.15
295_A	334_I	0.516	0.15
321_V	324_G	0.516	0.15
214_Q	446_D	0.516	0.15
98_S	129_K	0.515	0.15
159_V	162_T	0.515	0.15
117_I	225_A	0.514	0.15
290_F	300_A	0.513	0.15
312_M	429_N	0.512	0.15
80_D	340_L	0.512	0.15
222_L	243_G	0.511	0.15
20_S	272_K	0.511	0.15
460_V	469_Y	0.510	0.15
84_G	363_K	0.509	0.15
50_P	55_N	0.509	0.15
411_R	422_S	0.509	0.15
257_F	289_T	0.508	0.15
134_M	400_M	0.507	0.15
80_D	94_V	0.507	0.15
204_L	249_A	0.506	0.15
192_V	465_N	0.506	0.15
171_V	220_L	0.506	0.15
350_L	360_M	0.506	0.15
151_L	169_A	0.503	0.15
145_G	343_S	0.503	0.15
23_S	200_N	0.503	0.15
157_G	428_I	0.502	0.15
116_L	150_I	0.502	0.15
101_P	138_N	0.502	0.15
49_F	108_I	0.500	0.15

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qnqA	2	0.7406	99.9	0.88	Contact Map
1vkrA	1	0.1925	99.8	0.912	Contact Map
3czcA	1	0.1862	99.4	0.933	Contact Map
1tvmA	1	0.2218	99.3	0.935	Contact Map
1e2bA	1	0.1904	99.3	0.936	Contact Map
2l2qA	1	0.1925	99.2	0.94	Contact Map
4mgeA	3	0.1841	99.1	0.942	Contact Map
3nbmA	1	0.1862	98.7	0.951	Contact Map
4tn5A	2	0.1883	98.1	0.958	Contact Map
2m1zA	1	0.1904	98	0.959	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0124 seconds.