GREMLIN Database
YXDM - ABC transporter permease protein YxdM
UniProt: P42424 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 622 (598)
Sequences: 2282 (2001)
Seq/√Len: 81.8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
368_E372_A6.4151.00
366_I369_S5.6091.00
367_S370_D5.4381.00
211_Y214_V4.6771.00
382_L386_E4.4451.00
211_Y215_L4.2751.00
369_S372_A4.2021.00
147_M152_L4.1631.00
368_E371_A4.1481.00
206_C210_G4.0801.00
210_G214_V3.8831.00
366_I371_A3.8811.00
369_S440_D3.7691.00
262_N558_I3.7211.00
595_S599_G3.6771.00
153_G157_C3.5131.00
206_C230_L3.4321.00
366_I370_D3.4011.00
586_G589_D3.3031.00
380_N386_E3.2951.00
372_A375_F3.2141.00
372_A376_H3.1461.00
210_G213_M3.1331.00
366_I372_A3.0681.00
367_S371_A3.0331.00
370_D373_K2.9481.00
83_R107_E2.9171.00
249_A253_W2.9031.00
215_L577_F2.8951.00
207_L211_Y2.8351.00
367_S372_A2.7861.00
76_V170_T2.6511.00
382_L385_D2.6041.00
337_T340_F2.5161.00
382_L387_A2.4611.00
362_P366_I2.4601.00
383_K386_E2.4541.00
235_T574_H2.4251.00
33_F37_M2.4141.00
208_C212_G2.4071.00
438_V442_T2.3571.00
335_L339_G2.3251.00
365_M369_S2.3191.00
422_V425_V2.2821.00
211_Y574_H2.2521.00
210_G234_G2.2461.00
439_N442_T2.2301.00
371_A375_F2.2221.00
369_S376_H2.2031.00
280_F286_I2.1731.00
437_A440_D2.1651.00
231_T578_A2.1591.00
26_A118_A2.1351.00
184_K187_G2.1331.00
605_Q612_V2.1331.00
384_E441_Q2.1241.00
212_G216_K2.1211.00
206_C214_V2.1071.00
362_P367_S2.1021.00
574_H578_A2.0961.00
366_I376_H2.0911.00
264_I268_D2.0911.00
172_L176_S2.0851.00
238_F570_I2.0741.00
124_F147_M2.0501.00
385_D442_T1.9821.00
84_N185_G1.9561.00
22_F115_S1.9551.00
205_A209_G1.9151.00
362_P369_S1.9131.00
553_A617_L1.9031.00
129_T132_T1.8991.00
30_L122_G1.8711.00
382_L388_V1.8511.00
569_V573_M1.8481.00
327_H331_I1.8361.00
239_F284_S1.8211.00
540_R544_K1.8161.00
557_T609_F1.8041.00
554_Q558_I1.8021.00
314_E491_K1.8011.00
21_F108_N1.7801.00
288_A292_T1.7711.00
407_K410_N1.7651.00
325_Q329_K1.7371.00
121_I125_I1.7241.00
462_H465_D1.7121.00
364_Y369_S1.7071.00
364_Y367_S1.7061.00
362_P372_A1.6941.00
31_I34_T1.6941.00
196_S200_S1.6901.00
9_K13_R1.6771.00
328_L334_E1.6691.00
207_L214_V1.6381.00
210_G231_T1.6291.00
324_E327_H1.6251.00
371_A376_H1.6241.00
10_N24_S1.6071.00
379_V382_L1.6061.00
384_E387_A1.5981.00
381_G386_E1.5961.00
264_I547_L1.5941.00
380_N387_A1.5901.00
362_P368_E1.5881.00
289_V293_A1.5881.00
490_S493_G1.5871.00
465_D468_E1.5871.00
91_L100_L1.5841.00
406_L410_N1.5821.00
294_T513_A1.5771.00
29_V32_F1.5761.00
89_I92_M1.5761.00
524_L563_L1.5701.00
67_F71_F1.5531.00
572_V598_I1.5310.99
368_E376_H1.5300.99
181_K188_K1.5300.99
29_V116_I1.5180.99
289_V292_T1.5160.99
286_I290_A1.5100.99
32_F155_T1.5080.99
209_G213_M1.5070.99
368_E382_L1.5050.99
328_L335_L1.5030.99
87_F104_I1.4990.99
609_F613_R1.4930.99
203_G211_Y1.4930.99
139_E499_V1.4850.99
471_Q475_N1.4770.99
365_M370_D1.4750.99
336_K339_G1.4730.99
281_F286_I1.4670.99
268_D542_L1.4580.99
218_N221_G1.4450.99
527_R531_D1.4420.99
315_Y490_S1.4340.99
155_T182_L1.4320.99
288_A571_A1.4260.99
557_T613_R1.4220.99
178_T181_K1.4190.99
98_G102_K1.4160.99
32_F65_F1.4150.99
455_L460_Y1.4070.99
548_S551_E1.4050.99
308_E491_K1.4010.99
362_P376_H1.3930.99
206_C213_M1.3900.99
200_S210_G1.3890.99
532_L619_K1.3870.99
200_S211_Y1.3860.99
209_G215_L1.3830.99
329_K332_D1.3800.99
332_D335_L1.3650.99
96_T99_Q1.3650.99
190_K275_D1.3640.99
210_G230_L1.3610.99
365_M368_E1.3570.99
261_K268_D1.3550.99
107_E123_G1.3540.99
84_N173_F1.3520.99
364_Y368_E1.3400.99
206_C211_Y1.3340.99
42_P46_E1.3250.98
527_R563_L1.3220.98
205_A211_Y1.3130.98
223_E226_I1.3060.98
384_E388_V1.3000.98
197_V200_S1.2990.98
234_G238_F1.2940.98
32_F36_A1.2900.98
371_A374_Y1.2790.98
214_V578_A1.2730.98
456_Y460_Y1.2720.98
78_A529_F1.2720.98
334_E337_T1.2700.98
134_G507_F1.2680.98
249_A252_K1.2630.98
407_K419_K1.2530.98
436_I439_N1.2470.98
212_G215_L1.2460.98
433_N437_A1.2450.98
210_G215_L1.2440.98
496_Y500_Q1.2430.98
128_K132_T1.2410.98
536_R540_R1.2370.98
556_V616_Y1.2360.98
601_F605_Q1.2350.98
282_I286_I1.2240.97
365_M372_A1.2190.97
229_L233_I1.2180.97
205_A572_V1.2170.97
332_D336_K1.2100.97
149_W153_G1.2090.97
96_T548_S1.1910.97
326_T329_K1.1890.97
78_A530_T1.1880.97
226_I230_L1.1860.97
284_S288_A1.1860.97
364_Y370_D1.1840.97
116_I156_A1.1840.97
331_I335_L1.1800.97
208_C211_Y1.1800.97
441_Q444_D1.1760.97
607_L611_A1.1640.97
124_F152_L1.1560.96
86_E90_L1.1560.96
33_F124_F1.1510.96
613_R616_Y1.1490.96
76_V528_L1.1480.96
532_L616_Y1.1470.96
196_S199_L1.1440.96
454_S458_Y1.1430.96
12_T15_K1.1420.96
199_L240_S1.1290.96
3_F95_I1.1230.96
71_F79_F1.1220.96
556_V560_L1.1150.96
350_S353_R1.1130.96
455_L462_H1.1090.95
33_F123_G1.1090.95
157_C425_V1.1080.95
248_R252_K1.1050.95
328_L332_D1.1050.95
529_F539_Y1.1010.95
327_H335_L1.1000.95
292_T582_L1.0990.95
564_F567_P1.0960.95
535_D559_Q1.0900.95
120_I156_A1.0890.95
613_R617_L1.0880.95
288_A601_F1.0780.95
541_S544_K1.0760.95
372_A377_V1.0740.95
14_N86_E1.0730.95
528_L605_Q1.0730.95
26_A122_G1.0690.94
592_G596_L1.0670.94
329_K468_E1.0620.94
527_R535_D1.0620.94
193_P271_Y1.0590.94
287_S601_F1.0580.94
422_V427_K1.0550.94
224_P227_I1.0550.94
342_Y345_D1.0530.94
402_A410_N1.0530.94
543_A552_M1.0500.94
390_F399_K1.0480.94
286_I520_A1.0460.94
41_H131_F1.0460.94
4_L8_Y1.0440.94
38_F512_I1.0430.94
368_E375_F1.0400.94
469_I476_E1.0380.94
440_D444_D1.0370.93
25_S68_S1.0360.93
419_K422_V1.0260.93
74_Y182_L1.0240.93
239_F574_H1.0230.93
251_K267_S1.0230.93
235_T239_F1.0190.93
227_I519_A1.0150.93
200_S203_G1.0140.93
120_I152_L1.0080.93
278_R293_A1.0070.92
206_C209_G1.0040.92
381_G385_D1.0020.92
420_L423_K1.0010.92
200_S245_W1.0010.92
420_L424_E1.0000.92
34_T130_F0.9980.92
565_F572_V0.9950.92
300_Y304_V0.9930.92
73_L169_F0.9910.92
272_R276_N0.9860.92
235_T578_A0.9830.92
21_F115_S0.9820.92
495_Y518_V0.9810.91
591_A595_S0.9760.91
427_K430_I0.9750.91
6_F90_L0.9710.91
599_G603_I0.9680.91
267_S271_Y0.9680.91
519_A524_L0.9650.91
77_N84_N0.9620.91
612_V619_K0.9620.91
385_D388_V0.9610.91
11_V22_F0.9610.91
332_D337_T0.9560.90
330_D333_H0.9540.90
36_A61_E0.9530.90
21_F24_S0.9520.90
593_P597_T0.9510.90
304_V308_E0.9440.90
68_S162_L0.9400.90
193_P244_I0.9380.90
74_Y523_F0.9360.89
606_L610_L0.9360.89
288_A574_H0.9360.89
121_I476_E0.9320.89
577_F580_R0.9320.89
231_T272_R0.9290.89
441_Q445_Q0.9280.89
314_E317_S0.9260.89
435_I438_V0.9250.89
422_V429_L0.9240.89
75_S608_F0.9240.89
464_K467_L0.9240.89
284_S290_A0.9230.89
362_P365_M0.9200.89
421_S433_N0.9200.89
204_I321_N0.9200.89
231_T235_T0.9190.89
204_I513_A0.9140.88
303_T307_E0.9130.88
71_F526_F0.9110.88
522_S526_F0.9110.88
112_G167_S0.9070.88
365_M371_A0.9060.88
32_F39_L0.9060.88
493_G497_D0.9050.88
198_L469_I0.9040.88
67_F75_S0.9030.88
381_G387_A0.9020.88
514_I606_L0.9010.88
78_A605_Q0.9000.88
321_N327_H0.8990.87
279_L282_I0.8980.87
203_G210_G0.8970.87
528_L559_Q0.8940.87
438_V443_F0.8920.87
543_A549_E0.8920.87
435_I440_D0.8900.87
125_I129_T0.8880.87
364_Y371_A0.8880.87
242_S608_F0.8870.87
512_I516_F0.8860.87
370_D375_F0.8850.87
17_A515_V0.8840.87
84_N145_L0.8820.86
467_L470_S0.8810.86
134_G527_R0.8810.86
389_Y403_P0.8780.86
200_S214_V0.8780.86
199_L214_V0.8780.86
367_S376_H0.8780.86
466_S470_S0.8740.86
10_N14_N0.8730.86
335_L342_Y0.8720.86
526_F601_F0.8710.86
108_N170_T0.8680.86
101_R171_I0.8650.85
284_S289_V0.8640.85
151_A507_F0.8620.85
605_Q619_K0.8620.85
255_T378_K0.8620.85
224_P228_L0.8590.85
203_G207_L0.8580.85
7_A11_V0.8570.85
80_L170_T0.8540.85
436_I497_D0.8530.85
584_V589_D0.8530.85
507_F527_R0.8460.84
277_A283_V0.8460.84
204_I211_Y0.8460.84
214_V227_I0.8450.84
112_G163_F0.8450.84
267_S280_F0.8440.84
41_H143_L0.8430.84
323_K330_D0.8400.84
402_A406_L0.8400.84
206_C233_I0.8390.84
10_N107_E0.8390.84
492_A495_Y0.8370.83
280_F287_S0.8370.83
286_I289_V0.8360.83
579_L583_A0.8350.83
545_I553_A0.8350.83
222_A225_F0.8340.83
275_D534_E0.8310.83
337_T341_T0.8280.83
32_F41_H0.8270.83
327_H330_D0.8270.83
160_L164_F0.8250.83
279_L283_V0.8250.83
305_G309_S0.8250.83
207_L210_G0.8240.82
9_K12_T0.8230.82
83_R86_E0.8210.82
168_Q172_L0.8190.82
489_A494_T0.8180.82
208_C213_M0.8180.82
211_Y235_T0.8180.82
400_N422_V0.8170.82
179_V282_I0.8170.82
559_Q568_F0.8160.82
24_S71_F0.8150.82
7_A10_N0.8140.82
234_G237_F0.8130.82
293_A512_I0.8130.82
363_V366_I0.8130.82
109_M113_V0.8110.81
130_F495_Y0.8100.81
292_T512_I0.8100.81
111_I178_T0.8100.81
192_E248_R0.8090.81
3_F11_V0.8090.81
116_I159_F0.8080.81
286_I526_F0.8060.81
244_I247_L0.8040.81
64_I272_R0.8020.81
33_F155_T0.8000.81
65_F162_L0.7970.80
380_N393_T0.7940.80
42_P100_L0.7930.80
256_F262_N0.7920.80
419_K424_E0.7920.80
81_K531_D0.7900.80
465_D473_L0.7880.80
509_G513_A0.7870.79
5_Q9_K0.7860.79
585_E589_D0.7860.79
63_M67_F0.7850.79
363_V369_S0.7830.79
403_P408_L0.7830.79
26_A30_L0.7820.79
151_A155_T0.7810.79
24_S276_N0.7810.79
296_V299_M0.7800.79
41_H71_F0.7790.79
112_G116_I0.7780.79
231_T574_H0.7770.79
330_D334_E0.7760.79
342_Y346_K0.7750.78
391_P399_K0.7750.78
21_F112_G0.7740.78
325_Q328_L0.7740.78
74_Y567_P0.7740.78
281_F292_T0.7700.78
25_S163_F0.7700.78
15_K35_F0.7690.78
17_A20_A0.7680.78
197_V212_G0.7670.78
519_A525_Y0.7660.78
141_D441_Q0.7660.78
364_Y376_H0.7650.78
302_S305_G0.7650.78
424_E591_A0.7640.77
14_N17_A0.7630.77
78_A612_V0.7630.77
272_R275_D0.7620.77
468_E476_E0.7610.77
71_F511_F0.7600.77
268_D538_R0.7590.77
88_G183_I0.7590.77
161_L327_H0.7570.77
531_D535_D0.7570.77
236_Y286_I0.7560.77
539_Y555_S0.7560.77
431_S554_Q0.7550.77
326_T351_Y0.7550.77
213_M230_L0.7540.77
196_S241_Q0.7540.77
205_A475_N0.7540.77
83_R123_G0.7510.76
236_Y282_I0.7500.76
379_V387_A0.7490.76
542_L545_I0.7490.76
362_P408_L0.7480.76
423_K430_I0.7460.76
292_T578_A0.7450.76
98_G550_R0.7440.76
211_Y578_A0.7420.75
378_K381_G0.7410.75
288_A293_A0.7410.75
605_Q613_R0.7400.75
518_V566_F0.7400.75
24_S30_L0.7380.75
273_L277_A0.7380.75
17_A24_S0.7360.75
369_S375_F0.7360.75
459_S462_H0.7350.75
230_L234_G0.7350.75
75_S314_E0.7330.74
315_Y423_K0.7330.74
385_D462_H0.7310.74
232_V285_I0.7300.74
305_G308_E0.7300.74
466_S469_I0.7290.74
35_F111_I0.7280.74
37_M566_F0.7270.74
334_E569_V0.7250.74
100_L104_I0.7240.74
44_L187_G0.7220.73
6_F305_G0.7220.73
390_F395_D0.7210.73
130_F436_I0.7210.73
267_S507_F0.7200.73
18_Y35_F0.7190.73
574_H605_Q0.7190.73
491_K495_Y0.7180.73
3_F13_R0.7170.73
467_L476_E0.7160.73
574_H577_F0.7150.73
398_F406_L0.7140.73
66_V385_D0.7130.72
33_F264_I0.7110.72
372_A380_N0.7110.72
24_S511_F0.7110.72
473_L477_I0.7100.72
91_L96_T0.7100.72
434_A439_N0.7090.72
511_F515_V0.7080.72
247_L269_L0.7080.72
29_V53_A0.7080.72
364_Y372_A0.7080.72
22_F36_A0.7060.72
337_T343_T0.7050.72
159_F513_A0.7040.71
328_L333_H0.7030.71
406_L411_Q0.7020.71
74_Y564_F0.7020.71
42_P146_Y0.7010.71
208_C333_H0.7000.71
347_I352_V0.6990.71
86_E564_F0.6990.71
386_E421_S0.6980.71
462_H469_I0.6980.71
247_L270_V0.6960.71
228_L296_V0.6940.70
4_L597_T0.6930.70
464_K468_E0.6920.70
4_L7_A0.6910.70
113_V160_L0.6900.70
582_L590_V0.6890.70
114_M328_L0.6880.70
52_I56_G0.6860.70
195_P245_W0.6850.69
67_F515_V0.6840.69
498_T502_P0.6830.69
11_V26_A0.6830.69
271_Y275_D0.6820.69
202_F206_C0.6820.69
468_E473_L0.6820.69
520_A571_A0.6810.69
95_I528_L0.6810.69
76_V564_F0.6810.69
9_K27_F0.6800.69
380_N388_V0.6800.69
311_Y494_T0.6800.69
24_S271_Y0.6780.69
75_S80_L0.6780.69
3_F7_A0.6760.68
65_F108_N0.6760.68
153_G330_D0.6750.68
41_H526_F0.6750.68
89_I539_Y0.6740.68
468_E472_S0.6730.68
312_E315_Y0.6710.68
29_V119_G0.6690.68
119_G123_G0.6690.68
164_F168_Q0.6680.67
610_L613_R0.6670.67
535_D616_Y0.6660.67
99_Q130_F0.6650.67
349_V352_V0.6650.67
380_N383_K0.6640.67
73_L79_F0.6640.67
201_L603_I0.6620.67
236_Y240_S0.6610.67
526_F616_Y0.6610.67
332_D344_K0.6600.67
21_F32_F0.6600.67
424_E427_K0.6590.66
520_A578_A0.6590.66
71_F267_S0.6590.66
333_H337_T0.6580.66
90_L513_A0.6580.66
430_I433_N0.6580.66
256_F259_R0.6580.66
214_V574_H0.6570.66
288_A522_S0.6570.66
25_S34_T0.6560.66
149_W152_L0.6560.66
572_V576_L0.6560.66
159_F162_L0.6550.66
58_T62_W0.6550.66
125_I319_S0.6550.66
34_T331_I0.6550.66
374_Y377_V0.6540.66
36_A40_F0.6520.66
547_L563_L0.6520.66
66_V531_D0.6520.66
557_T610_L0.6520.66
336_K340_F0.6510.65
513_A538_R0.6510.65
63_M183_I0.6510.65
419_K448_S0.6500.65
37_M41_H0.6500.65
159_F174_V0.6490.65
116_I129_T0.6490.65
267_S272_R0.6460.65
323_K327_H0.6450.65
227_I521_A0.6440.65
78_A90_L0.6440.65
179_V251_K0.6440.65
71_F522_S0.6430.65
314_E459_S0.6430.65
291_F294_T0.6410.64
343_T346_K0.6400.64
256_F266_V0.6400.64
365_M437_A0.6390.64
556_V617_L0.6380.64
90_L279_L0.6370.64
299_M502_P0.6360.64
61_E64_I0.6360.64
341_T347_I0.6350.64
507_F605_Q0.6340.63
72_V112_G0.6330.63
202_F476_E0.6330.63
88_G182_L0.6320.63
200_S206_C0.6320.63
291_F296_V0.6310.63
132_T136_Y0.6310.63
11_V18_Y0.6290.63
347_I353_R0.6280.63
367_S375_F0.6280.63
72_V85_K0.6280.63
67_F519_A0.6280.63
409_L433_N0.6260.62
264_I267_S0.6260.62
34_T173_F0.6240.62
291_F520_A0.6230.62
537_E540_R0.6230.62
457_G460_Y0.6220.62
579_L591_A0.6210.62
372_A379_V0.6190.62
157_C484_V0.6180.61
106_A110_I0.6180.61
297_L301_K0.6180.61
102_K106_A0.6180.61
387_A391_P0.6180.61
274_K285_I0.6170.61
25_S115_S0.6170.61
434_A438_V0.6150.61
227_I231_T0.6150.61
88_G191_P0.6150.61
18_Y21_F0.6130.61
153_G595_S0.6130.61
516_F539_Y0.6130.61
365_M373_K0.6110.61
268_D608_F0.6100.60
503_S507_F0.6100.60
409_L412_K0.6100.60
99_Q102_K0.6080.60
10_N13_R0.6080.60
363_V367_S0.6080.60
525_Y567_P0.6080.60
331_I458_Y0.6070.60
198_L206_C0.6070.60
65_F158_G0.6060.60
9_K21_F0.6050.60
337_T349_V0.6040.60
133_V524_L0.6040.60
98_G208_C0.6030.60
467_L471_Q0.6030.60
56_G233_I0.6010.59
134_G280_F0.6010.59
95_I268_D0.6010.59
526_F535_D0.6000.59
30_L34_T0.6000.59
377_V389_Y0.5990.59
298_A499_V0.5990.59
289_V524_L0.5990.59
493_G496_Y0.5990.59
535_D555_S0.5980.59
23_L270_V0.5970.59
419_K427_K0.5960.59
198_L212_G0.5950.59
509_G535_D0.5950.59
384_E471_Q0.5940.58
596_L600_G0.5940.58
327_H332_D0.5940.58
349_V353_R0.5940.58
609_F615_S0.5930.58
602_F606_L0.5930.58
325_Q381_G0.5930.58
371_A382_L0.5930.58
331_I334_E0.5920.58
17_A530_T0.5920.58
326_T330_D0.5920.58
391_P488_F0.5910.58
70_L287_S0.5910.58
90_L523_F0.5910.58
166_L287_S0.5910.58
287_S291_F0.5890.58
209_G226_I0.5890.58
545_I555_S0.5880.58
201_L209_G0.5880.58
12_T114_M0.5860.57
103_L174_V0.5850.57
468_E471_Q0.5850.57
87_F90_L0.5850.57
200_S208_C0.5850.57
84_N180_I0.5850.57
40_F43_A0.5840.57
184_K188_K0.5820.57
478_Y599_G0.5810.57
572_V575_T0.5810.57
222_A407_K0.5810.57
568_F601_F0.5790.57
148_P265_W0.5790.57
472_S477_I0.5790.57
507_F511_F0.5780.56
93_Q96_T0.5780.56
256_F562_I0.5770.56
119_G562_I0.5770.56
254_K258_L0.5760.56
141_D333_H0.5760.56
516_F527_R0.5760.56
14_N18_Y0.5750.56
232_V235_T0.5750.56
466_S472_S0.5750.56
361_P365_M0.5740.56
419_K423_K0.5740.56
110_I113_V0.5740.56
158_G161_L0.5740.56
418_Q445_Q0.5740.56
321_N390_F0.5730.56
277_A574_H0.5730.56
272_R294_T0.5730.56
524_L608_F0.5730.56
48_Y51_N0.5720.56
422_V426_K0.5720.56
100_L135_A0.5710.56
240_S277_A0.5700.55
588_S596_L0.5690.55
369_S373_K0.5690.55
446_L450_G0.5690.55
296_V582_L0.5690.55
366_I590_V0.5680.55
475_N479_G0.5680.55
147_M246_I0.5680.55
126_F514_I0.5680.55
400_N403_P0.5680.55
237_F544_K0.5670.55
127_S268_D0.5660.55
509_G574_H0.5660.55
321_N324_E0.5650.55
120_I225_F0.5650.55
180_I184_K0.5650.55
45_K54_K0.5640.55
426_K430_I0.5640.55
66_V147_M0.5630.54
258_L528_L0.5630.54
54_K607_L0.5620.54
287_S521_A0.5620.54
67_F182_L0.5620.54
17_A265_W0.5610.54
404_D441_Q0.5610.54
246_I250_L0.5600.54
21_F526_F0.5590.54
57_L508_I0.5590.54
370_D376_H0.5580.54
525_Y535_D0.5580.54
401_E430_I0.5570.54
329_K333_H0.5570.54
459_S479_G0.5560.54
13_R539_Y0.5550.53
267_S276_N0.5530.53
266_V524_L0.5510.53
30_L524_L0.5510.53
214_V231_T0.5500.53
204_I399_K0.5500.53
47_G50_N0.5490.53
287_S571_A0.5490.53
459_S473_L0.5480.53
176_S460_Y0.5480.53
286_I516_F0.5480.53
67_F83_R0.5480.53
211_Y216_K0.5480.53
133_V164_F0.5470.52
335_L340_F0.5470.52
512_I517_F0.5460.52
556_V575_T0.5450.52
373_K376_H0.5440.52
265_W555_S0.5440.52
60_A75_S0.5430.52
15_K68_S0.5430.52
332_D475_N0.5430.52
73_L85_K0.5430.52
29_V159_F0.5420.52
21_F36_A0.5420.52
313_M317_S0.5420.52
272_R279_L0.5410.52
204_I207_L0.5410.52
533_D559_Q0.5410.52
530_T557_T0.5400.51
347_I603_I0.5400.51
196_S210_G0.5390.51
6_F9_K0.5390.51
28_S543_A0.5380.51
333_H336_K0.5380.51
476_E479_G0.5360.51
71_F525_Y0.5350.51
14_N525_Y0.5340.51
201_L205_A0.5340.51
156_A592_G0.5340.51
419_K467_L0.5330.51
103_L240_S0.5330.51
362_P371_A0.5330.51
60_A89_I0.5330.51
66_V279_L0.5330.51
81_K190_K0.5320.50
124_F128_K0.5320.50
331_I375_F0.5310.50
155_T539_Y0.5300.50
541_S545_I0.5290.50
503_S506_L0.5280.50
60_A71_F0.5280.50
84_N234_G0.5280.50
24_S522_S0.5280.50
261_K264_I0.5270.50
39_L512_I0.5270.50
133_V137_I0.5270.50
3_F520_A0.5260.50
470_S474_Q0.5260.50
448_S569_V0.5260.50
89_I495_Y0.5260.50
216_K253_W0.5260.50
609_F612_V0.5250.49
122_G212_G0.5250.49
559_Q564_F0.5230.49
61_E68_S0.5220.49
19_L374_Y0.5220.49
312_E317_S0.5220.49
341_T344_K0.5220.49
80_L524_L0.5220.49
469_I477_I0.5210.49
59_A434_A0.5190.49
53_A65_F0.5190.49
274_K288_A0.5190.49
66_V371_A0.5180.49
197_V245_W0.5180.49
330_D385_D0.5180.49
165_F334_E0.5170.48
57_L230_L0.5170.48
575_T579_L0.5170.48
102_K473_L0.5160.48
325_Q339_G0.5150.48
207_L234_G0.5140.48
70_L579_L0.5140.48
176_S542_L0.5140.48
425_V442_T0.5140.48
71_F243_S0.5130.48
180_I551_E0.5110.48
443_F500_Q0.5100.48
328_L462_H0.5100.48
198_L470_S0.5100.48
308_E384_E0.5100.48
38_F90_L0.5090.47
182_L298_A0.5090.47
250_L266_V0.5090.47
8_Y12_T0.5080.47
187_G319_S0.5080.47
13_R41_H0.5080.47
341_T464_K0.5080.47
74_Y78_A0.5080.47
106_A427_K0.5070.47
50_N54_K0.5070.47
127_S539_Y0.5070.47
251_K508_I0.5070.47
124_F331_I0.5070.47
304_V495_Y0.5060.47
422_V430_I0.5060.47
203_G214_V0.5060.47
156_A249_A0.5050.47
117_A470_S0.5040.47
324_E331_I0.5040.47
19_L26_A0.5040.47
27_F53_A0.5040.47
364_Y377_V0.5040.47
269_L562_I0.5040.47
389_Y453_A0.5040.47
529_F605_Q0.5040.47
283_V290_A0.5040.47
60_A511_F0.5030.47
538_R573_M0.5020.46
196_S214_V0.5020.46
76_V523_F0.5020.46
280_F601_F0.5020.46
121_I336_K0.5010.46
25_S75_S0.5010.46
147_M547_L0.5010.46
129_T152_L0.5010.46
71_F265_W0.5010.46
341_T381_G0.5000.46
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3ftjA 1 0.3248 98.5 0.899 Contact Map
3is6A 2 0.3199 96.2 0.934 Contact Map
1yfbA 2 0.0836 27 0.969 Contact Map
4b4aA 1 0.3344 21.6 0.97 Contact Map
2l66A 2 0.0852 19.9 0.971 Contact Map
2mrnA 2 0.1077 18.9 0.971 Contact Map
4nawA 1 0.1415 8.2 0.975 Contact Map
3o27A 2 0.0932 6.3 0.977 Contact Map
1yu8X 1 0.1029 6.2 0.977 Contact Map
4httA 1 0.3376 5.7 0.977 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0154 seconds.