YXJC - BACSU - GREMLIN Contacts

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YXJC - Uncharacterized transporter YxjC

UniProt:	P42314	Sequences: MELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSIFMEKMAGFIKLYFPVFLLGAIFGKVVEMAGLAASIAKTIVRLVGAKRAILAIVLMGAVLTYSGVSLFVVVFAVYPFAKNMFQEANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTSFFKTDIYAAPWLGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAAEPDKSPIRHALAFVPLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGIITTILFDWRSVFAQLKEGLNEGIGGALLASMNTGAEYGFGGIIAALPGFHKLSSGISHTFTDPLVNGAVTTTALAGITGSASGGMGIALSAMSEQYLQAIQAYNIPPEVMHRVISMASGGMDTLPHNGAVITLLAVTGLTHRQSYRDIFAITLIKTAAVFAVIAIYSLTGLV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	472 (429)
Sequences:	3480 (2173)
Seq/√Len:	104.9

ECOLI - GNTP YJHF GNTU YGBN IDNT GNTT DSDX
BACSU - YXJC YOJA GNTP

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
248_L	302_T	4.247	1.00
50_I	345_A	4.123	1.00
88_T	239_H	3.971	1.00
9_A	339_F	3.639	1.00
9_A	34_A	3.614	1.00
341_G	345_A	3.574	1.00
239_H	243_F	3.319	1.00
440_T	443_Q	3.232	1.00
12_L	33_F	3.179	1.00
200_S	204_K	3.083	1.00
350_H	354_S	2.850	1.00
172_F	414_I	2.847	1.00
465_I	469_T	2.817	1.00
368_A	456_T	2.811	1.00
193_A	458_A	2.769	1.00
53_E	57_G	2.663	1.00
194_G	198_L	2.594	1.00
42_H	47_F	2.582	1.00
238_R	241_L	2.571	1.00
372_T	420_G	2.546	1.00
185_M	189_I	2.529	1.00
281_L	285_S	2.525	1.00
78_M	318_G	2.501	1.00
100_L	195_M	2.499	1.00
461_A	465_I	2.486	1.00
88_T	91_R	2.400	1.00
195_M	198_L	2.398	1.00
11_G	15_F	2.384	1.00
302_T	306_F	2.378	1.00
88_T	92_L	2.325	1.00
367_G	414_I	2.284	1.00
15_F	19_R	2.249	1.00
199_E	203_K	2.230	1.00
376_G	421_M	2.222	1.00
12_L	30_C	2.200	1.00
54_K	341_G	2.172	1.00
5_I	37_L	2.160	1.00
197_Y	201_R	2.089	1.00
416_M	459_V	2.081	1.00
42_H	46_F	2.051	1.00
301_I	305_L	2.047	1.00
95_A	133_E	2.023	1.00
252_V	298_I	2.007	1.00
155_D	419_G	2.006	1.00
206_Q	209_G	1.987	1.00
321_E	324_G	1.986	1.00
421_M	449_F	1.961	1.00
71_I	319_L	1.954	1.00
305_L	310_S	1.946	1.00
183_G	186_G	1.927	1.00
186_G	466_Y	1.925	1.00
81_L	242_A	1.922	1.00
147_L	194_G	1.915	1.00
450_A	454_I	1.890	1.00
457_A	461_A	1.883	1.00
396_Y	410_M	1.880	1.00
166_V	385_M	1.824	1.00
74_K	78_M	1.819	1.00
179_A	411_H	1.775	1.00
237_I	242_A	1.769	1.00
186_G	189_I	1.751	1.00
198_L	202_R	1.742	1.00
404_N	407_P	1.738	1.00
434_L	444_S	1.682	1.00
59_I	334_G	1.673	1.00
51_F	338_G	1.652	1.00
183_G	189_I	1.646	1.00
32_L	294_I	1.646	1.00
442_R	446_R	1.637	1.00
184_L	188_V	1.613	1.00
50_I	341_G	1.605	1.00
195_M	199_E	1.594	1.00
249_V	253_N	1.591	1.00
103_V	191_L	1.584	1.00
142_P	437_T	1.560	1.00
110_T	153_T	1.555	1.00
21_F	26_F	1.546	1.00
200_S	203_K	1.545	1.00
201_R	205_A	1.512	1.00
34_A	339_F	1.505	1.00
333_T	427_N	1.504	1.00
420_G	456_T	1.494	1.00
38_T	42_H	1.493	1.00
460_F	464_A	1.488	1.00
197_Y	450_A	1.476	1.00
42_H	45_P	1.475	1.00
187_A	190_V	1.474	1.00
135_N	208_S	1.465	1.00
12_L	16_T	1.464	1.00
256_F	260_L	1.456	1.00
368_A	460_F	1.453	1.00
376_G	420_G	1.452	1.00
153_T	160_T	1.447	1.00
240_A	244_V	1.442	1.00
55_M	63_F	1.440	1.00
365_V	460_F	1.436	1.00
84_S	88_T	1.434	1.00
403_Y	407_P	1.426	1.00
186_G	462_V	1.421	1.00
393_S	397_L	1.411	1.00
9_A	33_F	1.403	1.00
197_Y	200_S	1.393	1.00
36_L	43_V	1.392	1.00
75_V	303_T	1.388	1.00
64_P	68_L	1.385	1.00
45_P	49_S	1.383	1.00
106_G	123_V	1.369	1.00
120_V	436_V	1.367	1.00
171_F	389_L	1.365	1.00
326_A	330_S	1.357	1.00
13_L	30_C	1.350	0.99
187_A	191_L	1.349	0.99
49_S	53_E	1.345	0.99
203_K	207_A	1.343	0.99
245_P	306_F	1.343	0.99
280_R	283_I	1.343	0.99
253_N	256_F	1.341	0.99
241_L	306_F	1.341	0.99
35_V	342_I	1.339	0.99
454_I	458_A	1.327	0.99
420_G	453_L	1.326	0.99
253_N	257_T	1.321	0.99
81_L	307_D	1.316	0.99
84_S	236_P	1.314	0.99
372_T	376_G	1.311	0.99
340_G	344_A	1.304	0.99
317_E	321_E	1.297	0.99
196_L	199_E	1.296	0.99
33_F	37_L	1.281	0.99
182_L	186_G	1.276	0.99
181_W	185_M	1.271	0.99
196_L	200_S	1.271	0.99
35_V	47_F	1.266	0.99
242_A	245_P	1.263	0.99
303_T	307_D	1.262	0.99
245_P	253_N	1.260	0.99
182_L	412_R	1.252	0.99
198_L	203_K	1.250	0.99
41_S	346_L	1.245	0.99
422_D	448_I	1.243	0.99
87_K	91_R	1.243	0.99
84_S	239_H	1.242	0.99
193_A	196_L	1.241	0.99
422_D	426_H	1.240	0.99
166_V	171_F	1.227	0.99
179_A	408_E	1.226	0.99
282_D	285_S	1.212	0.99
195_M	202_R	1.209	0.99
83_A	234_K	1.208	0.99
181_W	184_L	1.205	0.99
71_I	300_I	1.204	0.99
30_C	33_F	1.202	0.99
354_S	357_S	1.202	0.99
259_Y	286_A	1.200	0.99
83_A	87_K	1.193	0.99
282_D	286_A	1.191	0.99
296_L	303_T	1.190	0.99
76_V	81_L	1.185	0.99
182_L	185_M	1.185	0.99
41_S	50_I	1.173	0.99
205_A	209_G	1.171	0.99
279_G	283_I	1.170	0.99
119_V	149_A	1.167	0.98
208_S	212_Y	1.167	0.98
341_G	344_A	1.167	0.98
85_I	242_A	1.166	0.98
250_G	253_N	1.160	0.98
46_F	49_S	1.159	0.98
174_T	179_A	1.156	0.98
313_A	317_E	1.156	0.98
182_L	189_I	1.155	0.98
194_G	200_S	1.152	0.98
274_G	280_R	1.152	0.98
192_A	196_L	1.147	0.98
197_Y	454_I	1.146	0.98
260_L	287_A	1.140	0.98
421_M	445_Y	1.131	0.98
257_T	260_L	1.130	0.98
180_P	184_L	1.129	0.98
412_R	463_I	1.129	0.98
105_M	109_L	1.123	0.98
201_R	204_K	1.122	0.98
87_K	236_P	1.122	0.98
459_V	463_I	1.117	0.98
375_A	426_H	1.108	0.98
182_L	408_E	1.107	0.98
198_L	201_R	1.106	0.98
193_A	454_I	1.106	0.98
38_T	346_L	1.094	0.98
409_V	467_S	1.089	0.98
79_A	303_T	1.085	0.98
38_T	41_S	1.084	0.98
118_V	428_G	1.082	0.98
147_L	451_I	1.076	0.97
195_M	200_S	1.075	0.97
242_A	253_N	1.070	0.97
183_G	187_A	1.070	0.97
150_F	452_T	1.069	0.97
52_M	61_L	1.069	0.97
167_I	171_F	1.069	0.97
408_E	411_H	1.063	0.97
452_T	455_K	1.060	0.97
199_E	202_R	1.059	0.97
464_A	468_L	1.057	0.97
464_A	469_T	1.047	0.97
16_T	21_F	1.045	0.97
186_G	190_V	1.043	0.97
151_T	455_K	1.042	0.97
209_G	212_Y	1.031	0.97
283_I	287_A	1.027	0.97
156_A	459_V	1.027	0.97
273_I	283_I	1.027	0.97
244_V	248_L	1.025	0.97
167_I	179_A	1.022	0.97
87_K	133_E	1.017	0.96
202_R	205_A	1.014	0.96
351_K	355_G	1.008	0.96
109_L	123_V	1.002	0.96
443_Q	446_R	0.992	0.96
248_L	252_V	0.991	0.96
180_P	183_G	0.991	0.96
465_I	468_L	0.990	0.96
163_I	167_I	0.989	0.96
281_L	284_S	0.986	0.96
6_I	10_L	0.985	0.96
5_I	38_T	0.983	0.96
384_G	426_H	0.982	0.96
462_V	465_I	0.980	0.96
439_L	443_Q	0.980	0.96
48_S	294_I	0.978	0.96
378_T	384_G	0.977	0.95
118_V	433_L	0.972	0.95
110_T	160_T	0.968	0.95
273_I	286_A	0.967	0.95
7_L	11_G	0.963	0.95
46_F	50_I	0.962	0.95
174_T	411_H	0.961	0.95
175_D	178_A	0.960	0.95
372_T	456_T	0.959	0.95
210_E	213_G	0.957	0.95
383_G	387_I	0.955	0.95
190_V	458_A	0.952	0.95
190_V	462_V	0.949	0.95
3_L	7_L	0.945	0.95
186_G	412_R	0.936	0.94
94_G	101_A	0.936	0.94
85_I	243_F	0.930	0.94
13_L	26_F	0.927	0.94
408_E	412_R	0.926	0.94
58_F	337_Y	0.925	0.94
284_S	287_A	0.924	0.94
279_G	284_S	0.924	0.94
422_D	452_T	0.923	0.94
164_Q	167_I	0.918	0.94
351_K	354_S	0.918	0.94
207_A	210_E	0.916	0.94
214_G	217_S	0.915	0.94
451_I	455_K	0.914	0.94
450_A	455_K	0.912	0.93
398_Q	403_Y	0.912	0.93
241_L	244_V	0.912	0.93
160_T	333_T	0.911	0.93
154_M	160_T	0.911	0.93
194_G	197_Y	0.909	0.93
154_M	382_S	0.908	0.93
274_G	279_G	0.906	0.93
198_L	209_G	0.905	0.93
198_L	205_A	0.904	0.93
273_I	280_R	0.903	0.93
464_A	467_S	0.900	0.93
184_L	187_A	0.898	0.93
92_L	96_K	0.897	0.93
303_T	311_V	0.890	0.93
248_L	299_G	0.887	0.93
196_L	204_K	0.887	0.93
381_A	418_S	0.884	0.92
409_V	463_I	0.884	0.92
423_T	452_T	0.878	0.92
89_I	93_V	0.878	0.92
466_Y	469_T	0.875	0.92
200_S	206_Q	0.875	0.92
89_I	104_L	0.871	0.92
444_S	448_I	0.870	0.92
207_A	443_Q	0.869	0.92
45_P	284_S	0.869	0.92
151_T	187_A	0.865	0.92
314_Q	317_E	0.862	0.91
283_I	286_A	0.859	0.91
56_A	60_K	0.856	0.91
445_Y	449_F	0.854	0.91
418_S	427_N	0.854	0.91
332_N	386_G	0.853	0.91
36_L	47_F	0.849	0.91
55_M	64_P	0.849	0.91
409_V	466_Y	0.848	0.91
167_I	173_K	0.848	0.91
174_T	189_I	0.848	0.91
200_S	205_A	0.848	0.91
194_G	206_Q	0.847	0.91
364_L	405_I	0.838	0.90
203_K	206_Q	0.838	0.90
35_V	48_S	0.833	0.90
274_G	283_I	0.833	0.90
107_A	153_T	0.831	0.90
5_I	33_F	0.828	0.90
352_L	377_I	0.827	0.90
406_P	467_S	0.826	0.90
246_L	253_N	0.824	0.89
9_A	38_T	0.823	0.89
421_M	453_L	0.823	0.89
252_V	255_Y	0.822	0.89
211_G	215_F	0.821	0.89
462_V	466_Y	0.819	0.89
145_I	148_G	0.819	0.89
307_D	311_V	0.817	0.89
123_V	149_A	0.815	0.89
207_A	439_L	0.813	0.89
259_Y	283_I	0.810	0.89
381_A	427_N	0.810	0.89
365_V	369_V	0.809	0.89
67_L	331_M	0.808	0.89
203_K	209_G	0.807	0.88
195_M	204_K	0.807	0.88
100_L	192_A	0.807	0.88
449_F	456_T	0.804	0.88
239_H	253_N	0.804	0.88
458_A	461_A	0.802	0.88
375_A	381_A	0.799	0.88
273_I	279_G	0.798	0.88
14_M	30_C	0.797	0.88
140_L	144_T	0.795	0.88
249_V	252_V	0.795	0.88
34_A	348_G	0.794	0.88
424_L	445_Y	0.793	0.88
64_P	293_E	0.788	0.87
441_H	445_Y	0.787	0.87
48_S	52_M	0.787	0.87
179_A	186_G	0.786	0.87
198_L	207_A	0.786	0.87
84_S	242_A	0.786	0.87
460_F	466_Y	0.781	0.87
394_E	398_Q	0.777	0.87
241_L	302_T	0.777	0.87
366_N	396_Y	0.776	0.86
53_E	341_G	0.775	0.86
282_D	465_I	0.775	0.86
120_V	124_Y	0.774	0.86
197_Y	202_R	0.772	0.86
447_D	450_A	0.772	0.86
384_G	422_D	0.771	0.86
26_F	30_C	0.768	0.86
304_I	319_L	0.768	0.86
258_I	261_P	0.766	0.86
304_I	315_L	0.766	0.86
72_F	300_I	0.765	0.86
110_T	119_V	0.762	0.85
257_T	261_P	0.758	0.85
367_G	371_T	0.755	0.85
88_T	243_F	0.755	0.85
147_L	198_L	0.754	0.85
202_R	209_G	0.753	0.85
188_V	192_A	0.751	0.85
178_A	408_E	0.751	0.85
8_L	37_L	0.750	0.85
449_F	453_L	0.750	0.85
213_G	216_D	0.748	0.84
107_A	148_G	0.747	0.84
5_I	30_C	0.745	0.84
249_V	254_K	0.743	0.84
189_I	193_A	0.739	0.84
189_I	462_V	0.739	0.84
153_T	157_L	0.737	0.84
426_H	448_I	0.737	0.84
296_L	300_I	0.736	0.83
295_A	303_T	0.730	0.83
106_G	153_T	0.728	0.83
295_A	298_I	0.723	0.82
397_L	410_M	0.722	0.82
252_V	256_F	0.721	0.82
143_G	198_L	0.720	0.82
463_I	467_S	0.717	0.82
51_F	335_A	0.716	0.82
41_S	47_F	0.716	0.82
375_A	422_D	0.713	0.81
385_M	388_A	0.713	0.81
179_A	183_G	0.712	0.81
214_G	218_Q	0.711	0.81
182_L	405_I	0.711	0.81
194_G	209_G	0.707	0.81
191_L	195_M	0.707	0.81
244_V	247_I	0.706	0.81
198_L	204_K	0.705	0.81
192_A	306_F	0.705	0.81
102_I	106_G	0.701	0.80
319_L	322_G	0.699	0.80
280_R	284_S	0.695	0.80
162_Q	336_E	0.695	0.80
68_L	297_V	0.695	0.80
422_D	428_G	0.693	0.80
102_I	141_I	0.693	0.80
206_Q	210_E	0.692	0.80
409_V	469_T	0.689	0.79
5_I	34_A	0.689	0.79
172_F	410_M	0.688	0.79
171_F	390_S	0.686	0.79
153_T	163_I	0.685	0.79
156_A	416_M	0.685	0.79
46_F	173_K	0.683	0.79
171_F	174_T	0.680	0.78
249_V	256_F	0.678	0.78
397_L	407_P	0.677	0.78
374_L	378_T	0.677	0.78
207_A	213_G	0.676	0.78
150_F	374_L	0.675	0.78
186_G	416_M	0.674	0.78
28_P	68_L	0.674	0.78
186_G	463_I	0.673	0.78
163_I	166_V	0.669	0.77
237_I	252_V	0.669	0.77
329_A	436_V	0.669	0.77
70_A	194_G	0.669	0.77
5_I	9_A	0.668	0.77
166_V	173_K	0.668	0.77
385_M	418_S	0.665	0.77
191_L	194_G	0.664	0.77
273_I	462_V	0.663	0.77
9_A	370_T	0.661	0.76
84_S	238_R	0.658	0.76
90_V	93_V	0.657	0.76
179_A	182_L	0.656	0.76
238_R	242_A	0.655	0.76
21_F	347_P	0.654	0.76
233_D	236_P	0.654	0.76
234_K	237_I	0.653	0.75
185_M	313_A	0.652	0.75
381_A	452_T	0.652	0.75
94_G	97_R	0.651	0.75
378_T	422_D	0.651	0.75
47_F	342_I	0.651	0.75
292_V	296_L	0.651	0.75
216_D	220_A	0.650	0.75
376_G	449_F	0.649	0.75
116_L	146_A	0.648	0.75
202_R	206_Q	0.647	0.75
238_R	255_Y	0.646	0.75
25_L	71_I	0.645	0.75
256_F	261_P	0.644	0.74
67_L	334_G	0.644	0.74
167_I	418_S	0.639	0.74
76_V	172_F	0.639	0.74
244_V	302_T	0.637	0.74
11_G	310_S	0.637	0.74
116_L	160_T	0.635	0.73
211_G	214_G	0.633	0.73
127_A	145_I	0.633	0.73
368_A	420_G	0.633	0.73
213_G	217_S	0.633	0.73
416_M	463_I	0.632	0.73
106_G	119_V	0.632	0.73
137_P	205_A	0.631	0.73
365_V	464_A	0.630	0.73
90_V	334_G	0.630	0.73
150_F	419_G	0.629	0.73
83_A	105_M	0.628	0.73
138_K	142_P	0.627	0.73
374_L	388_A	0.627	0.73
180_P	189_I	0.626	0.72
167_I	170_S	0.625	0.72
22_S	328_L	0.625	0.72
154_M	158_P	0.625	0.72
185_M	462_V	0.625	0.72
363_P	410_M	0.624	0.72
294_I	298_I	0.623	0.72
14_M	18_Y	0.623	0.72
196_L	202_R	0.622	0.72
328_L	332_N	0.620	0.72
309_R	312_F	0.620	0.72
246_L	249_V	0.619	0.72
381_A	419_G	0.618	0.71
403_Y	406_P	0.618	0.71
27_A	339_F	0.612	0.71
256_F	287_A	0.611	0.71
372_T	452_T	0.609	0.70
16_T	29_I	0.609	0.70
144_T	242_A	0.608	0.70
66_F	432_T	0.607	0.70
55_M	331_M	0.606	0.70
165_N	171_F	0.604	0.70
82_A	88_T	0.602	0.69
154_M	161_P	0.602	0.69
196_L	205_A	0.602	0.69
62_Y	333_T	0.602	0.69
61_L	427_N	0.602	0.69
335_A	338_G	0.601	0.69
90_V	300_I	0.601	0.69
364_L	410_M	0.601	0.69
43_V	285_S	0.601	0.69
99_I	140_L	0.598	0.69
164_Q	175_D	0.597	0.69
458_A	462_V	0.596	0.69
156_A	412_R	0.596	0.69
220_A	251_A	0.596	0.69
115_S	382_S	0.594	0.68
8_L	12_L	0.594	0.68
235_S	251_A	0.593	0.68
370_T	388_A	0.593	0.68
79_A	100_L	0.593	0.68
454_I	457_A	0.590	0.68
375_A	384_G	0.589	0.68
160_T	382_S	0.588	0.68
209_G	213_G	0.587	0.68
216_D	219_N	0.587	0.68
143_G	444_S	0.585	0.67
194_G	199_E	0.584	0.67
307_D	310_S	0.583	0.67
117_F	154_M	0.582	0.67
145_I	149_A	0.581	0.67
72_F	299_G	0.581	0.67
183_G	190_V	0.580	0.67
376_G	445_Y	0.579	0.67
256_F	290_W	0.579	0.67
256_F	259_Y	0.579	0.67
205_A	210_E	0.577	0.66
355_G	359_T	0.575	0.66
140_L	151_T	0.574	0.66
375_A	448_I	0.573	0.66
82_A	158_P	0.573	0.66
115_S	329_A	0.571	0.65
188_V	219_N	0.571	0.65
159_G	337_Y	0.570	0.65
371_T	392_M	0.569	0.65
461_A	464_A	0.569	0.65
190_V	194_G	0.569	0.65
257_T	427_N	0.569	0.65
303_T	306_F	0.567	0.65
273_I	282_D	0.566	0.65
92_L	102_I	0.565	0.65
196_L	203_K	0.562	0.64
96_K	309_R	0.562	0.64
182_L	187_A	0.561	0.64
55_M	59_I	0.561	0.64
448_I	452_T	0.560	0.64
20_G	132_Q	0.559	0.64
146_A	433_L	0.558	0.64
191_L	202_R	0.558	0.64
68_L	325_G	0.558	0.64
204_K	207_A	0.557	0.64
114_V	333_T	0.557	0.64
378_T	426_H	0.556	0.63
300_I	303_T	0.556	0.63
199_E	204_K	0.555	0.63
22_S	323_I	0.555	0.63
202_R	207_A	0.555	0.63
236_P	242_A	0.555	0.63
75_V	79_A	0.555	0.63
195_M	203_K	0.554	0.63
120_V	420_G	0.554	0.63
137_P	140_L	0.553	0.63
52_M	60_K	0.553	0.63
363_P	403_Y	0.553	0.63
65_V	145_I	0.553	0.63
336_E	431_I	0.552	0.63
371_T	414_I	0.551	0.63
71_I	355_G	0.551	0.63
117_F	158_P	0.550	0.63
12_L	29_I	0.550	0.63
76_V	307_D	0.548	0.62
136_I	141_I	0.547	0.62
213_G	219_N	0.547	0.62
110_T	148_G	0.546	0.62
178_A	406_P	0.546	0.62
93_V	101_A	0.546	0.62
396_Y	413_V	0.546	0.62
444_S	452_T	0.545	0.62
296_L	307_D	0.545	0.62
107_A	114_V	0.544	0.62
146_A	340_G	0.544	0.62
364_L	409_V	0.544	0.62
140_L	202_R	0.543	0.62
201_R	208_S	0.543	0.62
234_K	242_A	0.542	0.61
214_G	220_A	0.542	0.61
83_A	236_P	0.542	0.61
127_A	141_I	0.540	0.61
356_I	370_T	0.539	0.61
100_L	104_L	0.539	0.61
56_A	177_Y	0.539	0.61
367_G	410_M	0.539	0.61
206_Q	212_Y	0.538	0.61
114_V	427_N	0.538	0.61
274_G	286_A	0.536	0.61
173_K	354_S	0.536	0.61
178_A	181_W	0.535	0.60
89_I	237_I	0.535	0.60
38_T	47_F	0.533	0.60
91_R	203_K	0.533	0.60
150_F	381_A	0.533	0.60
59_I	373_A	0.532	0.60
72_F	114_V	0.530	0.60
251_A	358_H	0.529	0.60
237_I	250_G	0.528	0.59
115_S	120_V	0.528	0.59
350_H	357_S	0.528	0.59
4_I	157_L	0.526	0.59
74_K	321_E	0.525	0.59
240_A	243_F	0.525	0.59
96_K	241_L	0.524	0.59
24_I	34_A	0.522	0.59
131_F	136_I	0.521	0.58
180_P	190_V	0.519	0.58
189_I	192_A	0.518	0.58
101_A	105_M	0.517	0.58
27_A	349_F	0.516	0.58
7_L	461_A	0.516	0.58
78_M	317_E	0.516	0.58
213_G	218_Q	0.516	0.58
422_D	425_P	0.514	0.57
170_S	174_T	0.514	0.57
242_A	249_V	0.513	0.57
27_A	336_E	0.513	0.57
89_I	101_A	0.512	0.57
47_F	50_I	0.512	0.57
74_K	77_E	0.511	0.57
174_T	180_P	0.511	0.57
93_V	104_L	0.511	0.57
28_P	51_F	0.510	0.57
317_E	320_N	0.509	0.57
190_V	455_K	0.509	0.57
63_F	164_Q	0.509	0.57
49_S	251_A	0.508	0.57
16_T	26_F	0.508	0.57
155_D	381_A	0.508	0.57
53_E	350_H	0.507	0.56
117_F	382_S	0.507	0.56
22_S	320_N	0.506	0.56
50_I	343_I	0.506	0.56
141_I	213_G	0.505	0.56
143_G	451_I	0.504	0.56
100_L	164_Q	0.502	0.56
326_A	333_T	0.502	0.56
116_L	340_G	0.501	0.56
190_V	459_V	0.501	0.56
251_A	462_V	0.500	0.55
59_I	72_F	0.500	0.55

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r1iA	2	0.9301	100	0.724	Contact Map
4r0cA	3	0.9089	100	0.731	Contact Map
4f35D	2	0.8411	100	0.761	Contact Map
3qnqA	2	0.4343	77.4	0.961	Contact Map
4pypA	1	0.3898	50.5	0.967	Contact Map
3giaA	1	0.3856	45.5	0.968	Contact Map
3l1lA	2	0.3835	43.7	0.969	Contact Map
4zw9A	1	0.4216	41.8	0.969	Contact Map
2onkC	2	0.4004	32.2	0.971	Contact Map
4djkA	2	0.4025	26.5	0.972	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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