CITN - BACSU - GREMLIN Contacts

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CITN - Citrate transporter

UniProt:	P42308	Sequences: MLAILGFVMMIVFMYLIMSNRLSALIALIVVPIVFALISGFGKDLGEMMIQGVTDLAPTGIMLLFAILYFGIMIDSGLFDPLIAKILSFVKGDPLKIAVGTAVLTMTISLDGDGTTTYMITIAAMLPLYKRLGMNRLVLAGIAMLGSGVMNIIPWGGPTARVLASLKLDTSEVFTPLIPAMIAGILWVIAVAYILGKKERKRLGVISIDHAPSSDPEAAPLKRPALQWFNLLLTVALMAALITSLLPLPVLFMTAFAVALMVNYPNVKEQQKRISAHAGNALNVVSMVFAAGIFTGILSGTKMVDAMAHSLVSLIPDAMGPHLPLITAIVSMPFTFFMSNDAFYFGVLPIIAEAASAYGIDAAEIGRASLLGQPVHLLSPLVPSTYLLVGMAGVSFGDHQKFTIKWAVGTTIVMTIAALLIGIISF	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	426 (424)
Sequences:	642 (408)
Seq/√Len:	19.8

BACSU - CITN CITM YRAO

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
229_F	262_V	11.540	1.00
273_R	276_A	5.625	1.00
69_Y	234_T	4.558	1.00
223_R	226_L	4.068	1.00
237_L	255_A	3.912	1.00
258_V	262_V	3.787	1.00
5_L	39_S	3.704	1.00
102_A	142_I	3.621	1.00
49_M	293_I	3.483	1.00
266_N	269_E	3.325	1.00
183_A	417_A	3.159	0.99
69_Y	237_L	3.100	0.99
98_A	142_I	3.062	0.99
7_F	307_M	3.016	0.99
36_A	45_L	3.009	0.99
330_V	343_F	2.923	0.99
102_A	188_V	2.891	0.99
73_M	234_T	2.750	0.99
15_Y	19_S	2.727	0.98
41_F	48_M	2.660	0.98
6_G	307_M	2.654	0.98
31_V	34_V	2.632	0.98
223_R	264_Y	2.626	0.98
85_K	88_S	2.622	0.98
130_K	136_R	2.582	0.98
237_L	251_L	2.569	0.98
182_I	186_L	2.560	0.98
399_H	403_T	2.454	0.97
340_N	376_H	2.376	0.96
60_G	289_F	2.355	0.96
187_W	410_T	2.251	0.95
101_T	129_Y	2.250	0.95
51_Q	300_G	2.250	0.95
72_I	256_F	2.249	0.95
82_L	231_L	2.203	0.94
97_I	132_L	2.160	0.94
103_V	189_I	2.137	0.93
49_M	250_V	2.130	0.93
86_I	100_G	2.126	0.93
78_L	231_L	2.108	0.93
29_I	253_M	2.085	0.92
73_M	78_L	2.061	0.92
99_V	193_Y	2.054	0.92
141_G	403_T	2.048	0.92
412_I	416_I	2.037	0.91
3_A	310_S	2.036	0.91
64_L	285_V	2.004	0.91
382_V	385_T	1.992	0.90
76_S	264_Y	1.984	0.90
16_L	31_V	1.925	0.89
339_S	342_A	1.894	0.88
145_L	407_A	1.874	0.87
98_A	134_M	1.860	0.87
46_G	247_P	1.855	0.87
199_E	202_R	1.819	0.86
118_Y	384_S	1.795	0.85
99_V	189_I	1.751	0.84
63_L	284_V	1.746	0.83
5_L	35_F	1.734	0.83
33_I	254_T	1.731	0.83
75_D	277_H	1.702	0.82
9_M	35_F	1.692	0.81
221_L	224_P	1.688	0.81
66_A	114_G	1.680	0.81
104_L	125_M	1.673	0.81
335_T	376_H	1.664	0.80
64_L	281_A	1.659	0.80
223_R	273_R	1.656	0.80
135_N	138_V	1.650	0.80
20_N	398_D	1.645	0.79
3_A	6_G	1.641	0.79
161_R	341_D	1.639	0.79
151_N	159_T	1.623	0.78
302_K	305_D	1.597	0.77
95_L	200_R	1.586	0.77
239_A	243_T	1.584	0.77
163_L	170_T	1.581	0.77
53_V	82_L	1.574	0.76
287_M	383_P	1.555	0.75
417_A	421_I	1.549	0.75
69_Y	229_F	1.529	0.74
224_P	273_R	1.522	0.74
140_A	392_A	1.521	0.74
106_M	185_I	1.508	0.73
37_L	42_G	1.492	0.72
338_M	376_H	1.482	0.72
371_L	415_T	1.475	0.71
162_V	366_G	1.474	0.71
169_D	244_S	1.470	0.71
2_L	306_A	1.455	0.70
4_I	8_V	1.454	0.70
335_T	374_P	1.437	0.69
406_W	409_G	1.429	0.69
371_L	418_A	1.426	0.69
348_L	365_I	1.426	0.69
75_D	276_A	1.422	0.68
394_V	399_H	1.421	0.68
3_A	307_M	1.420	0.68
232_L	420_L	1.419	0.68
221_L	264_Y	1.416	0.68
21_R	314_L	1.411	0.68
51_Q	54_T	1.406	0.68
34_V	239_A	1.405	0.67
335_T	382_V	1.389	0.67
9_M	350_I	1.378	0.66
75_D	273_R	1.370	0.65
149_V	188_V	1.354	0.65
177_L	371_L	1.351	0.64
26_I	260_L	1.345	0.64
398_D	401_K	1.336	0.63
105_T	121_T	1.323	0.63
307_M	338_M	1.318	0.62
90_V	100_G	1.310	0.62
226_L	229_F	1.309	0.62
396_F	399_H	1.304	0.62
5_L	278_A	1.302	0.61
229_F	258_V	1.280	0.60
151_N	158_P	1.275	0.60
392_A	399_H	1.273	0.60
335_T	340_N	1.267	0.59
310_S	366_G	1.266	0.59
14_M	340_N	1.255	0.58
343_F	369_S	1.255	0.58
62_M	237_L	1.252	0.58
383_P	421_I	1.250	0.58
377_L	382_V	1.243	0.58
138_V	402_F	1.241	0.58
9_M	336_F	1.234	0.57
73_M	259_A	1.233	0.57
348_L	369_S	1.232	0.57
183_A	315_I	1.232	0.57
186_L	235_V	1.226	0.57
187_W	191_V	1.221	0.56
340_N	377_L	1.219	0.56
118_Y	377_L	1.216	0.56
320_G	358_Y	1.213	0.56
369_S	388_L	1.213	0.56
88_S	107_T	1.202	0.55
180_A	421_I	1.197	0.55
232_L	236_A	1.193	0.55
87_L	190_A	1.188	0.54
5_L	49_M	1.181	0.54
109_S	147_S	1.180	0.54
375_V	382_V	1.167	0.53
141_G	402_F	1.162	0.53
78_L	234_T	1.142	0.51
113_D	287_M	1.138	0.51
105_T	146_G	1.134	0.51
291_A	342_A	1.129	0.50
305_D	309_H	1.120	0.50
156_G	159_T	1.118	0.50
113_D	123_A	1.112	0.49
113_D	116_T	1.111	0.49
105_T	221_L	1.111	0.49
144_M	399_H	1.102	0.49
169_D	322_H	1.099	0.49
128_L	238_M	1.091	0.48
129_Y	140_A	1.089	0.48
408_V	411_T	1.088	0.48
163_L	168_L	1.087	0.48
382_V	386_Y	1.085	0.48
331_S	343_F	1.082	0.47
45_L	393_G	1.080	0.47
338_M	377_L	1.072	0.47
135_N	402_F	1.071	0.47
216_P	269_E	1.066	0.46
24_A	67_I	1.066	0.46
140_A	399_H	1.063	0.46
226_L	262_V	1.060	0.46
118_Y	147_S	1.060	0.46
115_T	336_F	1.060	0.46
340_N	375_V	1.054	0.46
182_I	420_L	1.054	0.46
234_T	237_L	1.052	0.45
47_E	51_Q	1.048	0.45
119_M	123_A	1.048	0.45
164_A	319_M	1.046	0.45
178_I	182_I	1.044	0.45
93_D	200_R	1.044	0.45
148_G	414_M	1.043	0.45
338_M	374_P	1.037	0.45
63_L	287_M	1.036	0.44
14_M	376_H	1.035	0.44
76_S	97_I	1.031	0.44
389_V	396_F	1.029	0.44
378_L	405_K	1.025	0.44
99_V	103_V	1.022	0.44
162_V	348_L	1.017	0.43
174_F	181_M	1.013	0.43
173_V	366_G	1.009	0.43
366_G	369_S	1.008	0.43
131_R	354_A	1.007	0.43
62_M	151_N	0.995	0.42
177_L	345_F	0.995	0.42
204_G	207_S	0.989	0.41
150_M	393_G	0.989	0.41
60_G	136_R	0.989	0.41
60_G	164_A	0.987	0.41
98_A	138_V	0.985	0.41
108_I	113_D	0.984	0.41
130_K	133_G	0.983	0.41
141_G	399_H	0.977	0.41
82_L	338_M	0.977	0.41
233_L	259_A	0.973	0.41
160_A	386_Y	0.972	0.40
88_S	242_I	0.972	0.40
187_W	409_G	0.969	0.40
71_G	105_T	0.966	0.40
389_V	394_V	0.963	0.40
186_L	190_A	0.962	0.40
115_T	288_V	0.962	0.40
34_V	232_L	0.958	0.40
377_L	384_S	0.956	0.39
314_L	350_I	0.954	0.39
22_L	27_A	0.950	0.39
376_H	382_V	0.949	0.39
86_I	133_G	0.946	0.39
115_T	159_T	0.943	0.39
328_A	415_T	0.938	0.38
103_V	208_I	0.938	0.38
135_N	198_K	0.936	0.38
177_L	370_L	0.936	0.38
369_S	374_P	0.934	0.38
4_I	51_Q	0.934	0.38
21_R	133_G	0.933	0.38
60_G	385_T	0.930	0.38
189_I	416_I	0.929	0.38
235_V	416_I	0.922	0.37
335_T	375_V	0.922	0.37
231_L	318_A	0.915	0.37
34_V	37_L	0.915	0.37
229_F	233_L	0.914	0.37
374_P	382_V	0.912	0.37
340_N	386_Y	0.906	0.36
373_Q	388_L	0.906	0.36
310_S	328_A	0.903	0.36
254_T	258_V	0.902	0.36
13_F	113_D	0.899	0.36
194_I	198_K	0.895	0.36
69_Y	78_L	0.895	0.36
158_P	199_E	0.895	0.36
336_F	382_V	0.894	0.36
176_P	367_R	0.894	0.36
36_A	41_F	0.893	0.36
14_M	338_M	0.893	0.36
338_M	375_V	0.893	0.36
96_K	388_L	0.891	0.36
131_R	375_V	0.891	0.36
29_I	360_I	0.887	0.35
17_I	90_V	0.886	0.35
11_I	15_Y	0.884	0.35
105_T	143_A	0.881	0.35
340_N	382_V	0.881	0.35
221_L	225_A	0.880	0.35
140_A	388_L	0.878	0.35
4_I	186_L	0.875	0.35
402_F	405_K	0.875	0.35
63_L	288_V	0.872	0.34
225_A	329_I	0.872	0.34
236_A	240_A	0.872	0.34
148_G	399_H	0.870	0.34
335_T	373_Q	0.866	0.34
74_I	113_D	0.864	0.34
347_V	354_A	0.856	0.33
260_L	297_I	0.854	0.33
142_I	188_V	0.852	0.33
80_D	350_I	0.851	0.33
120_I	361_D	0.851	0.33
186_L	225_A	0.850	0.33
9_M	382_V	0.850	0.33
1_M	255_A	0.845	0.33
18_M	99_V	0.844	0.33
118_Y	376_H	0.844	0.33
268_K	274_I	0.844	0.33
378_L	406_W	0.843	0.33
190_A	194_I	0.839	0.33
41_F	44_D	0.838	0.32
224_P	264_Y	0.836	0.32
30_V	257_A	0.836	0.32
103_V	420_L	0.833	0.32
180_A	423_I	0.832	0.32
257_A	298_L	0.826	0.32
415_T	424_I	0.823	0.32
351_I	365_I	0.820	0.31
324_P	343_F	0.819	0.31
115_T	151_N	0.818	0.31
221_L	226_L	0.817	0.31
38_I	208_I	0.816	0.31
273_R	278_A	0.816	0.31
105_T	125_M	0.815	0.31
397_G	401_K	0.813	0.31
226_L	418_A	0.811	0.31
69_Y	258_V	0.809	0.31
71_G	90_V	0.807	0.31
325_L	424_I	0.806	0.31
131_R	419_L	0.803	0.31
240_A	245_L	0.803	0.31
69_Y	138_V	0.802	0.30
332_M	408_V	0.800	0.30
336_F	340_N	0.799	0.30
186_L	232_L	0.794	0.30
256_F	260_L	0.793	0.30
139_L	275_S	0.792	0.30
109_S	336_F	0.789	0.30
90_V	339_S	0.788	0.30
8_V	173_V	0.784	0.29
367_R	423_I	0.783	0.29
190_A	198_K	0.783	0.29
8_V	35_F	0.782	0.29
208_I	235_V	0.781	0.29
197_K	201_K	0.778	0.29
84_A	245_L	0.776	0.29
69_Y	262_V	0.775	0.29
3_A	9_M	0.774	0.29
164_A	201_K	0.772	0.29
168_L	274_I	0.772	0.29
186_L	268_K	0.770	0.29
62_M	128_L	0.770	0.29
206_I	209_D	0.770	0.29
298_L	392_A	0.770	0.29
335_T	338_M	0.769	0.29
5_L	9_M	0.765	0.28
6_G	111_D	0.765	0.28
3_A	128_L	0.764	0.28
320_G	355_A	0.762	0.28
30_V	99_V	0.760	0.28
106_M	146_G	0.759	0.28
71_G	276_A	0.758	0.28
109_S	152_I	0.756	0.28
315_I	360_I	0.756	0.28
71_G	195_L	0.754	0.28
142_I	195_L	0.754	0.28
118_Y	399_H	0.753	0.28
97_I	314_L	0.752	0.28
63_L	109_S	0.751	0.28
19_S	27_A	0.751	0.28
175_T	178_I	0.748	0.28
91_K	119_M	0.747	0.28
18_M	318_A	0.743	0.27
5_L	59_T	0.742	0.27
408_V	412_I	0.742	0.27
183_A	243_T	0.737	0.27
118_Y	375_V	0.736	0.27
21_R	58_P	0.733	0.27
91_K	409_G	0.731	0.27
163_L	173_V	0.730	0.27
335_T	339_S	0.729	0.27
264_Y	354_A	0.729	0.27
102_A	106_M	0.723	0.26
83_I	411_T	0.722	0.26
107_T	282_L	0.721	0.26
374_P	396_F	0.719	0.26
137_L	394_V	0.717	0.26
24_A	253_M	0.711	0.26
109_S	340_N	0.710	0.26
315_I	326_I	0.709	0.26
12_V	34_V	0.706	0.25
246_L	412_I	0.705	0.25
293_I	297_I	0.705	0.25
63_L	387_L	0.703	0.25
152_I	327_T	0.703	0.25
134_M	145_L	0.702	0.25
69_Y	179_P	0.701	0.25
74_I	116_T	0.701	0.25
34_V	212_P	0.701	0.25
186_L	308_A	0.701	0.25
287_M	400_Q	0.700	0.25
265_P	301_T	0.699	0.25
1_M	173_V	0.696	0.25
277_H	350_I	0.696	0.25
14_M	377_L	0.695	0.25
343_F	351_I	0.694	0.25
378_L	400_Q	0.694	0.25
16_L	195_L	0.692	0.25
42_G	142_I	0.692	0.25
14_M	151_N	0.692	0.25
373_Q	376_H	0.691	0.25
80_D	298_L	0.691	0.25
5_L	38_I	0.690	0.25
93_D	96_K	0.689	0.25
246_L	254_T	0.688	0.25
377_L	385_T	0.688	0.25
11_I	317_D	0.687	0.25
386_Y	396_F	0.687	0.25
355_A	365_I	0.685	0.24
23_S	289_F	0.685	0.24
67_I	281_A	0.685	0.24
11_I	98_A	0.684	0.24
335_T	377_L	0.684	0.24
15_Y	31_V	0.681	0.24
227_Q	231_L	0.679	0.24
418_A	424_I	0.678	0.24
167_K	235_V	0.676	0.24
264_Y	273_R	0.675	0.24
80_D	222_K	0.674	0.24
143_A	147_S	0.673	0.24
280_N	334_F	0.672	0.24
60_G	403_T	0.672	0.24
28_L	344_Y	0.671	0.24
28_L	335_T	0.671	0.24
288_V	339_S	0.669	0.24
67_I	334_F	0.667	0.24
385_T	403_T	0.667	0.24
94_P	388_L	0.667	0.24
98_A	398_D	0.664	0.23
31_V	55_D	0.663	0.23
59_T	304_V	0.663	0.23
24_A	267_V	0.662	0.23
288_V	331_S	0.662	0.23
232_L	269_E	0.662	0.23
23_S	313_S	0.662	0.23
184_G	414_M	0.661	0.23
346_G	373_Q	0.660	0.23
83_I	160_A	0.660	0.23
315_I	320_G	0.660	0.23
175_T	193_Y	0.657	0.23
14_M	375_V	0.656	0.23
253_M	298_L	0.648	0.23
67_I	81_P	0.648	0.23
214_S	313_S	0.647	0.23
395_S	398_D	0.647	0.23
273_R	294_F	0.647	0.23
14_M	59_T	0.646	0.23
91_K	201_K	0.643	0.23
69_Y	73_M	0.643	0.23
9_M	338_M	0.642	0.22
88_S	232_L	0.642	0.22
105_T	399_H	0.641	0.22
164_A	274_I	0.640	0.22
377_L	383_P	0.639	0.22
218_A	412_I	0.638	0.22
178_I	218_A	0.637	0.22
18_M	48_M	0.634	0.22
162_V	289_F	0.634	0.22
269_E	272_K	0.633	0.22
19_S	28_L	0.633	0.22
348_L	387_L	0.632	0.22
257_A	261_M	0.631	0.22
66_A	285_V	0.628	0.22
62_M	386_Y	0.628	0.22
339_S	375_V	0.625	0.22
72_I	387_L	0.625	0.22
319_M	322_H	0.625	0.22
30_V	417_A	0.623	0.22
20_N	395_S	0.621	0.22
40_G	83_I	0.620	0.21
336_F	339_S	0.618	0.21
197_K	289_F	0.617	0.21
1_M	28_L	0.616	0.21
216_P	219_A	0.615	0.21
13_F	327_T	0.615	0.21
197_K	206_I	0.614	0.21
89_F	401_K	0.614	0.21
269_E	293_I	0.614	0.21
336_F	408_V	0.613	0.21
34_V	43_K	0.612	0.21
196_G	202_R	0.611	0.21
147_S	377_L	0.610	0.21
31_V	182_I	0.610	0.21
171_S	244_S	0.609	0.21
62_M	382_V	0.608	0.21
193_Y	197_K	0.608	0.21
160_A	298_L	0.607	0.21
248_L	298_L	0.606	0.21
166_L	366_G	0.605	0.21
71_G	278_A	0.603	0.21
198_K	254_T	0.603	0.21
370_L	386_Y	0.603	0.21
115_T	391_M	0.602	0.21
68_L	264_Y	0.600	0.21
71_G	121_T	0.599	0.21
164_A	350_I	0.598	0.21
140_A	394_V	0.596	0.20
235_V	239_A	0.596	0.20
212_P	235_V	0.595	0.20
61_I	83_I	0.595	0.20
102_A	220_P	0.595	0.20
24_A	386_Y	0.593	0.20
37_L	47_E	0.592	0.20
128_L	282_L	0.592	0.20
386_Y	411_T	0.592	0.20
91_K	120_I	0.591	0.20
72_I	282_L	0.591	0.20
24_A	69_Y	0.589	0.20
83_I	402_F	0.588	0.20
287_M	339_S	0.587	0.20
287_M	345_F	0.586	0.20
45_L	352_A	0.585	0.20
328_A	378_L	0.585	0.20
94_P	376_H	0.585	0.20
12_V	329_I	0.584	0.20
267_V	386_Y	0.584	0.20
71_G	116_T	0.583	0.20
59_T	164_A	0.583	0.20
323_L	410_T	0.582	0.20
32_P	303_M	0.582	0.20
232_L	337_F	0.581	0.20
132_L	393_G	0.581	0.20
291_A	372_G	0.581	0.20
153_I	279_G	0.581	0.20
232_L	235_V	0.580	0.20
10_M	250_V	0.579	0.20
216_P	305_D	0.577	0.20
395_S	401_K	0.574	0.20
295_T	338_M	0.573	0.20
34_V	213_S	0.572	0.19
101_T	413_V	0.571	0.19
68_L	400_Q	0.571	0.19
232_L	416_I	0.571	0.19
89_F	100_G	0.570	0.19
44_D	319_M	0.570	0.19
45_L	247_P	0.570	0.19
350_I	413_V	0.568	0.19
157_G	199_E	0.567	0.19
253_M	387_L	0.567	0.19
99_V	314_L	0.566	0.19
84_A	416_I	0.566	0.19
343_F	348_L	0.566	0.19
59_T	394_V	0.565	0.19
281_A	354_A	0.564	0.19
285_V	383_P	0.564	0.19
7_F	179_P	0.564	0.19
312_V	360_I	0.564	0.19
103_V	412_I	0.564	0.19
170_T	305_D	0.564	0.19
226_L	264_Y	0.564	0.19
291_A	382_V	0.563	0.19
7_F	334_F	0.563	0.19
2_L	210_H	0.561	0.19
15_Y	37_L	0.561	0.19
61_I	79_F	0.561	0.19
281_A	297_I	0.560	0.19
118_Y	338_M	0.559	0.19
302_K	322_H	0.559	0.19
21_R	82_L	0.559	0.19
182_I	201_K	0.558	0.19
11_I	29_I	0.557	0.19
12_V	31_V	0.557	0.19
173_V	185_I	0.557	0.19
285_V	294_F	0.557	0.19
178_I	363_A	0.556	0.19
344_Y	397_G	0.556	0.19
23_S	167_K	0.556	0.19
105_T	289_F	0.556	0.19
118_Y	144_M	0.555	0.19
187_W	413_V	0.554	0.19
332_M	412_I	0.553	0.19
69_Y	248_L	0.553	0.19
29_I	53_V	0.553	0.19
229_F	261_M	0.551	0.19
274_I	287_M	0.550	0.19
113_D	284_V	0.549	0.19
172_E	362_A	0.549	0.19
153_I	170_T	0.549	0.19
329_I	416_I	0.549	0.19
33_I	250_V	0.547	0.18
45_L	129_Y	0.547	0.18
25_L	286_S	0.547	0.18
256_F	423_I	0.546	0.18
94_P	140_A	0.546	0.18
115_T	284_V	0.545	0.18
254_T	313_S	0.544	0.18
55_D	424_I	0.543	0.18
69_Y	240_A	0.543	0.18
385_T	396_F	0.542	0.18
93_D	388_L	0.541	0.18
143_A	288_V	0.541	0.18
138_V	264_Y	0.540	0.18
123_A	284_V	0.540	0.18
311_L	416_I	0.539	0.18
356_S	412_I	0.539	0.18
82_L	164_A	0.539	0.18
322_H	326_I	0.538	0.18
307_M	394_V	0.536	0.18
138_V	142_I	0.535	0.18
104_L	116_T	0.535	0.18
147_S	344_Y	0.534	0.18
231_L	235_V	0.534	0.18
306_A	310_S	0.534	0.18
294_F	386_Y	0.533	0.18
18_M	50_I	0.533	0.18
128_L	369_S	0.532	0.18
304_V	394_V	0.532	0.18
222_K	306_A	0.531	0.18
28_L	104_L	0.531	0.18
108_I	251_L	0.530	0.18
87_L	128_L	0.527	0.18
165_S	275_S	0.526	0.18
156_G	415_T	0.526	0.18
99_V	258_V	0.526	0.18
121_T	273_R	0.525	0.18
3_A	288_V	0.525	0.18
4_I	214_S	0.525	0.18
14_M	17_I	0.525	0.18
197_K	314_L	0.524	0.18
383_P	391_M	0.524	0.18
12_V	317_D	0.523	0.18
149_V	410_T	0.523	0.18
152_I	391_M	0.523	0.18
130_K	393_G	0.522	0.18
339_S	376_H	0.522	0.18
235_V	272_K	0.521	0.17
288_V	378_L	0.521	0.17
29_I	393_G	0.520	0.17
42_G	72_I	0.519	0.17
262_V	272_K	0.518	0.17
60_G	150_M	0.517	0.17
30_V	325_L	0.517	0.17
94_P	369_S	0.517	0.17
330_V	417_A	0.516	0.17
36_A	40_G	0.516	0.17
141_G	298_L	0.516	0.17
47_E	401_K	0.516	0.17
223_R	276_A	0.516	0.17
76_S	366_G	0.515	0.17
24_A	327_T	0.512	0.17
103_V	416_I	0.512	0.17
83_I	326_I	0.512	0.17
121_T	412_I	0.510	0.17
142_I	324_P	0.509	0.17
378_L	385_T	0.509	0.17
343_F	371_L	0.508	0.17
291_A	339_S	0.508	0.17
340_N	374_P	0.507	0.17
374_P	411_T	0.507	0.17
83_I	143_A	0.506	0.17
284_V	339_S	0.505	0.17
3_A	49_M	0.505	0.17
179_P	234_T	0.505	0.17
312_V	350_I	0.505	0.17
148_G	338_M	0.504	0.17
109_S	113_D	0.504	0.17
147_S	340_N	0.503	0.17
103_V	272_K	0.503	0.17
220_P	236_A	0.501	0.17
42_G	167_K	0.500	0.17

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r0cA	3	0.9718	100	0.798	Contact Map
4f35D	2	0.9202	100	0.816	Contact Map
4r1iA	2	0.9742	100	0.819	Contact Map
2a65A	2	0.4695	86.7	0.97	Contact Map
4dx5A	3	0.3803	76.2	0.973	Contact Map
3zuxA	1	0.385	58.1	0.976	Contact Map
3w9iA	3	0.3615	54.3	0.977	Contact Map
3aqpA	1	0.3498	43.8	0.978	Contact Map
4k0jA	3	0.3357	41.4	0.979	Contact Map
4pd6A	3	0.77	37.8	0.979	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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