GREMLIN Database
PPBD - Alkaline phosphatase D
UniProt: P42251 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 583 (495)
Sequences: 1758 (1268)
Seq/√Len: 57.0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
422_I430_V3.9921.00
79_V160_T3.8131.00
320_H373_N3.4821.00
367_E414_Q3.4581.00
105_E147_R3.3781.00
112_F147_R3.3691.00
371_F421_F3.3451.00
178_A194_M3.3391.00
367_E417_R3.2671.00
160_T259_P3.2051.00
273_Y295_Y3.0041.00
81_L135_A3.0021.00
175_F201_L2.9841.00
177_F205_L2.9621.00
511_D530_S2.9201.00
78_S134_E2.8881.00
331_V385_A2.8661.00
192_K250_N2.8531.00
108_K114_K2.8521.00
343_N351_S2.8261.00
105_E112_F2.8021.00
174_T502_T2.7461.00
105_E118_K2.7201.00
177_F499_V2.7051.00
322_T328_S2.6851.00
104_W119_G2.6731.00
261_V321_F2.5531.00
339_D359_R2.4311.00
123_A127_L2.4311.00
261_V331_V2.3801.00
231_E290_R2.3491.00
371_F417_R2.3201.00
201_L261_V2.3181.00
298_Y304_L2.2831.00
108_K139_E2.2671.00
75_L134_E2.2541.00
391_A443_S2.2291.00
134_E305_R2.1891.00
139_E144_Y2.1891.00
380_H535_K2.1711.00
143_V159_K2.1331.00
254_A260_W2.1171.00
238_Y290_R2.1151.00
173_M327_A2.1081.00
107_A112_F2.1071.00
246_R255_H2.1061.00
503_V508_W2.1021.00
209_I232_I2.0831.00
516_P524_A2.0801.00
128_A301_H2.0801.00
407_S437_V2.0771.00
420_N424_S2.0581.00
191_Y204_H2.0511.00
176_A194_M2.0451.00
516_P523_A2.0401.00
461_F533_Y2.0381.00
167_G325_N2.0341.00
208_Y255_H2.0221.00
445_L458_G2.0151.00
242_H246_R1.9701.00
430_V458_G1.9511.00
29_F33_A1.9291.00
364_K368_Q1.9281.00
24_F29_F1.9261.00
73_D319_R1.8971.00
178_A466_I1.8921.00
390_F445_L1.8711.00
262_V302_M1.8621.00
107_A111_H1.8360.99
75_L78_S1.8300.99
182_Q185_H1.8270.99
499_V510_A1.8120.99
375_G425_K1.8090.99
431_V508_W1.7940.99
342_A359_R1.7630.99
172_Q502_T1.7630.99
101_P120_T1.7580.99
329_F385_A1.7530.99
230_A237_D1.7520.99
440_S464_T1.7410.99
330_N373_N1.7350.99
389_F437_V1.7280.99
190_A466_I1.7270.99
110_E145_Y1.7000.99
235_L297_A1.6990.99
99_A125_P1.6970.99
368_Q372_N1.6930.99
253_A256_A1.6830.99
383_V508_W1.6830.99
327_A503_V1.6810.99
404_S407_S1.6670.99
143_V161_K1.6630.99
451_K454_S1.6530.99
181_Q188_Y1.6250.99
78_S135_A1.6230.99
263_T331_V1.6220.99
371_F418_V1.6200.99
334_T387_Q1.6150.99
149_K154_L1.6140.99
169_N325_N1.6040.99
491_F528_R1.6010.99
375_G421_F1.6010.99
513_R527_T1.5980.99
428_N535_K1.5970.99
361_L388_I1.5850.98
444_N490_Q1.5770.98
105_E149_K1.5740.98
123_A131_V1.5530.98
192_K196_K1.5520.98
461_F499_V1.5280.98
391_A445_L1.5260.98
108_K142_K1.5260.98
102_V131_V1.5240.98
443_S489_I1.5170.98
403_Y406_D1.5140.98
71_S259_P1.5110.98
389_F407_S1.5010.98
390_F432_V1.4960.98
243_A301_H1.4950.98
386_Q434_T1.4810.98
390_F419_I1.4760.97
127_L296_Q1.4700.97
67_L301_H1.4560.97
361_L414_Q1.4540.97
269_V287_F1.4480.97
446_H456_I1.4480.97
490_Q493_N1.4460.97
234_T237_D1.4460.97
271_N278_P1.4340.97
355_R412_P1.4340.97
253_A257_A1.4270.97
514_V528_R1.4260.97
264_W273_Y1.4210.97
269_V294_A1.4170.97
534_Q537_Q1.3960.96
103_K120_T1.3900.96
509_K530_S1.3760.96
203_F433_L1.3720.96
419_I445_L1.3680.96
181_Q191_Y1.3640.96
178_A204_H1.3630.96
422_I458_G1.3570.96
416_E420_N1.3560.96
325_N505_P1.3480.96
239_R300_E1.3360.95
79_V259_P1.3350.95
38_G41_L1.3140.95
42_G45_I1.3130.95
382_N427_L1.3080.95
69_V155_S1.3080.95
367_E371_F1.3020.95
437_V462_V1.2970.95
174_T500_R1.2900.94
28_K31_Q1.2860.94
71_S160_T1.2790.94
75_L305_R1.2770.94
328_S379_A1.2740.94
104_W133_V1.2700.94
423_K447_V1.2630.94
446_H449_F1.2610.94
103_K149_K1.2540.94
73_D305_R1.2490.93
193_H197_E1.2360.93
183_Y247_S1.2290.93
280_K285_E1.2280.93
107_A115_I1.2270.93
442_A512_Y1.2270.93
163_L321_F1.2200.93
417_R421_F1.2180.93
201_L501_C1.2130.92
140_P144_Y1.2130.92
112_F157_V1.2080.92
421_F427_L1.2010.92
363_G366_Q1.2000.92
507_Q532_V1.2000.92
193_H196_K1.1990.92
488_H491_F1.1890.92
362_L414_Q1.1890.92
264_W295_Y1.1880.92
165_A168_A1.1830.91
250_N521_P1.1820.91
330_N370_L1.1810.91
480_D484_K1.1770.91
388_I434_T1.1760.91
327_A433_L1.1730.91
66_T86_A1.1720.91
199_L258_F1.1720.91
29_F32_G1.1720.91
192_K195_A1.1670.91
286_A289_L1.1600.91
480_D483_L1.1590.91
187_Y250_N1.1580.91
412_P416_E1.1540.90
440_S514_V1.1490.90
434_T462_V1.1490.90
121_E133_V1.1450.90
461_F508_W1.1440.90
289_L293_A1.1410.90
35_K39_L1.1390.90
226_T244_Q1.1340.90
440_S463_G1.1340.90
414_Q417_R1.1210.89
402_I406_D1.1150.89
392_K488_H1.1130.89
402_I408_W1.1110.89
333_D337_Y1.1100.89
228_N241_R1.1070.89
197_E500_R1.1040.88
231_E279_E1.1030.88
173_M323_Y1.0970.88
71_S146_Y1.0950.88
470_G496_R1.0910.88
233_I237_D1.0900.88
392_K450_E1.0840.87
230_A233_I1.0820.87
202_V258_F1.0820.87
334_T362_L1.0790.87
134_E306_I1.0720.87
109_D113_R1.0710.87
81_L160_T1.0660.87
277_I280_K1.0650.87
108_K116_V1.0620.86
80_V134_E1.0610.86
237_D241_R1.0590.86
232_I237_D1.0570.86
175_F503_V1.0510.86
444_N449_F1.0470.86
175_F501_C1.0410.85
405_M408_W1.0370.85
117_R135_A1.0320.85
43_L46_A1.0310.85
276_K288_V1.0300.85
516_P526_S1.0250.84
328_S382_N1.0180.84
339_D360_T1.0170.84
173_M201_L1.0130.84
212_Y232_I1.0120.84
197_E498_Y1.0070.83
404_S408_W1.0070.83
254_A262_V1.0050.83
374_L422_I1.0020.83
527_T530_S1.0000.83
403_Y408_W0.9950.83
446_H488_H0.9880.82
402_I407_S0.9860.82
194_M202_V0.9850.82
322_T378_T0.9750.81
270_E280_K0.9720.81
263_T337_Y0.9690.81
179_S463_G0.9660.81
370_L384_L0.9620.80
225_R229_S0.9610.80
392_K409_D0.9580.80
100_V150_T0.9580.80
214_P244_Q0.9570.80
225_R244_Q0.9550.80
318_Y337_Y0.9540.80
517_F520_E0.9530.80
109_D115_I0.9500.79
174_T198_K0.9500.79
212_Y279_E0.9460.79
429_N535_K0.9440.79
78_S136_D0.9420.79
482_I489_I0.9400.79
106_V135_A0.9370.79
383_V503_V0.9370.79
334_T386_Q0.9330.78
456_I459_A0.9330.78
102_V121_E0.9310.78
212_Y217_Y0.9300.78
228_N240_N0.9270.78
389_F462_V0.9270.78
39_L43_L0.9260.78
194_M254_A0.9250.78
191_Y466_I0.9240.78
271_N279_E0.9240.78
220_K223_N0.9190.77
424_S427_L0.9180.77
180_C183_Y0.9170.77
104_W135_A0.9150.77
393_W489_I0.9140.77
502_T507_Q0.9130.77
112_F145_Y0.9120.77
448_D451_K0.9120.77
447_V455_K0.9110.77
101_P122_M0.9110.77
384_L432_V0.9100.76
36_I40_S0.9080.76
517_F523_A0.9060.76
390_F418_V0.9050.76
420_N447_V0.9030.76
431_V461_F0.9020.76
179_S205_L0.9020.76
124_K127_L0.9020.76
270_E279_E0.9010.76
393_W404_S0.8980.76
229_S244_Q0.8920.75
464_T514_V0.8910.75
141_N168_A0.8910.75
272_N341_Q0.8870.75
459_A533_Y0.8820.74
216_E219_S0.8820.74
273_Y276_K0.8780.74
40_S43_L0.8770.74
149_K152_H0.8730.73
87_P100_V0.8710.73
383_V501_C0.8690.73
278_P281_G0.8690.73
203_F385_A0.8670.73
189_T523_A0.8650.73
227_H240_N0.8630.73
407_S439_A0.8620.73
341_Q411_Y0.8590.72
68_G256_A0.8580.72
421_F425_K0.8560.72
264_W317_L0.8550.72
330_N382_N0.8530.72
469_G518_V0.8500.71
354_S412_P0.8500.71
182_Q215_N0.8490.71
173_M326_L0.8490.71
101_P123_A0.8480.71
377_S382_N0.8460.71
193_H498_Y0.8460.71
201_L329_F0.8450.71
41_L45_I0.8420.71
338_R388_I0.8390.70
69_V146_Y0.8370.70
489_I493_N0.8370.70
114_K118_K0.8330.70
431_V503_V0.8280.69
67_L86_A0.8270.69
188_Y467_T0.8270.69
81_L106_V0.8260.69
304_L317_L0.8230.69
27_R30_I0.8180.68
77_D140_P0.8160.68
41_L44_T0.8150.68
189_T517_F0.8130.68
107_A145_Y0.8120.68
39_L44_T0.8110.68
452_T455_K0.8110.68
404_S409_D0.8080.68
29_F36_I0.8070.67
231_E284_V0.8070.67
81_L142_K0.8060.67
163_L323_Y0.8050.67
414_Q418_V0.8040.67
463_G499_V0.8040.67
35_K38_G0.8030.67
221_T224_V0.8030.67
270_E277_I0.8020.67
109_D112_F0.8010.67
204_H298_Y0.8010.67
177_F433_L0.7950.66
515_M518_V0.7950.66
402_I405_M0.7940.66
502_T511_D0.7900.66
419_I422_I0.7890.66
392_K446_H0.7880.66
69_V156_P0.7870.65
339_D342_A0.7860.65
203_F329_F0.7860.65
205_L385_A0.7840.65
194_M258_F0.7830.65
81_L104_W0.7800.65
143_V258_F0.7800.65
382_N430_V0.7780.65
305_R319_R0.7760.64
208_Y251_L0.7760.64
413_A417_R0.7760.64
277_I340_D0.7760.64
317_L331_V0.7740.64
437_V441_W0.7740.64
406_D409_D0.7740.64
177_F463_G0.7730.64
228_N244_Q0.7710.64
108_K247_S0.7690.64
66_T85_L0.7640.63
334_T361_L0.7640.63
393_W437_V0.7630.63
31_Q45_I0.7600.63
181_Q204_H0.7570.62
429_N536_D0.7570.62
57_A424_S0.7570.62
34_G37_A0.7560.62
387_Q432_V0.7550.62
208_Y246_R0.7550.62
320_H330_N0.7540.62
178_A202_V0.7540.62
338_R342_A0.7540.62
434_T437_V0.7520.62
491_F514_V0.7490.62
374_L421_F0.7470.61
187_Y521_P0.7460.61
432_V445_L0.7430.61
76_S166_P0.7420.61
220_K224_V0.7400.61
442_A459_A0.7390.61
113_R118_K0.7370.60
67_L243_A0.7360.60
84_R128_A0.7360.60
209_I242_H0.7350.60
392_K449_F0.7340.60
274_A339_D0.7330.60
83_T148_F0.7320.60
197_E513_R0.7310.60
79_V106_V0.7310.60
112_F154_L0.7280.59
176_A500_R0.7270.59
389_F434_T0.7270.59
386_Q432_V0.7270.59
132_H301_H0.7270.59
419_I430_V0.7260.59
81_L119_G0.7260.59
165_A170_V0.7250.59
482_I485_E0.7250.59
116_V144_Y0.7240.59
78_S81_L0.7240.59
419_I447_V0.7230.59
109_D114_K0.7230.59
37_A40_S0.7220.59
191_Y194_M0.7210.59
382_N422_I0.7200.59
274_A277_I0.7200.59
245_Y251_L0.7200.59
107_A114_K0.7140.58
65_F83_T0.7130.58
170_V505_P0.7120.58
264_W315_M0.7100.58
203_F357_P0.7090.57
489_I492_F0.7080.57
317_L333_D0.7050.57
482_I486_N0.7040.57
263_T317_L0.7030.57
374_L427_L0.7020.57
500_R511_D0.7000.56
190_A515_M0.7000.56
26_R30_I0.7000.56
99_A124_K0.6990.56
332_L384_L0.6990.56
77_D136_D0.6990.56
272_N278_P0.6980.56
266_D406_D0.6970.56
493_N528_R0.6960.56
298_Y302_M0.6950.56
106_V144_Y0.6950.56
299_Y306_I0.6950.56
77_D198_K0.6940.56
62_S88_D0.6930.56
470_G518_V0.6930.56
74_P261_V0.6930.56
325_N380_H0.6930.56
161_K200_D0.6920.56
501_C508_W0.6920.56
182_Q188_Y0.6910.55
267_H436_D0.6910.55
65_F71_S0.6900.55
73_D134_E0.6860.55
219_S225_R0.6850.55
225_R241_R0.6820.55
245_Y298_Y0.6810.54
170_V325_N0.6790.54
126_S296_Q0.6790.54
386_Q496_R0.6740.54
193_H523_A0.6730.54
213_G216_E0.6720.53
99_A126_S0.6710.53
32_G35_K0.6710.53
64_P153_E0.6700.53
242_H255_H0.6700.53
107_A116_V0.6670.53
362_L367_E0.6640.53
36_I41_L0.6630.52
333_D379_A0.6610.52
234_T521_P0.6580.52
495_Y514_V0.6580.52
396_G485_E0.6580.52
212_Y280_K0.6580.52
449_F454_S0.6570.52
272_N404_S0.6570.52
298_Y317_L0.6570.52
102_V148_F0.6560.52
67_L132_H0.6560.52
419_I458_G0.6550.52
368_Q373_N0.6550.52
323_Y329_F0.6550.52
179_S188_Y0.6550.52
167_G322_T0.6530.51
139_E142_K0.6520.51
278_P282_Q0.6520.51
67_L128_A0.6510.51
265_D438_H0.6510.51
204_H270_E0.6500.51
279_E340_D0.6500.51
246_R320_H0.6480.51
65_F148_F0.6470.51
411_Y415_R0.6470.51
173_M503_V0.6470.51
193_H463_G0.6460.51
356_N359_R0.6450.50
194_M466_I0.6450.50
30_I33_A0.6450.50
266_D335_R0.6450.50
382_N429_N0.6440.50
204_H245_Y0.6430.50
209_I241_R0.6430.50
488_H493_N0.6420.50
442_A463_G0.6420.50
254_A258_F0.6420.50
28_K32_G0.6410.50
188_Y441_W0.6400.50
176_A202_V0.6400.50
78_S160_T0.6390.50
533_Y537_Q0.6370.50
276_K279_E0.6350.49
338_R341_Q0.6340.49
24_F356_N0.6330.49
156_P256_A0.6320.49
67_L85_L0.6300.49
33_A317_L0.6300.49
409_D488_H0.6300.49
184_E227_H0.6290.49
495_Y528_R0.6280.49
204_H260_W0.6270.49
106_V117_R0.6270.49
397_T400_S0.6270.49
517_F524_A0.6260.48
81_L488_H0.6260.48
360_T363_G0.6240.48
513_R525_I0.6220.48
334_T388_I0.6220.48
443_S458_G0.6210.48
486_N490_Q0.6210.48
65_F69_V0.6210.48
371_F375_G0.6200.48
228_N232_I0.6190.48
330_N386_Q0.6190.48
146_Y158_G0.6190.48
63_Y153_E0.6180.48
512_Y516_P0.6180.48
503_V507_Q0.6180.48
174_T199_L0.6180.48
306_I317_L0.6170.47
176_A199_L0.6160.47
240_N243_A0.6160.47
384_L430_V0.6140.47
26_R29_F0.6140.47
330_N374_L0.6130.47
202_V419_I0.6130.47
279_E285_E0.6130.47
277_I287_F0.6130.47
419_I457_F0.6110.47
79_V134_E0.6110.47
465_S496_R0.6110.47
138_L144_Y0.6110.47
446_H454_S0.6090.47
134_E309_L0.6090.47
30_I34_G0.6090.47
179_S437_V0.6080.46
486_N489_I0.6070.46
115_I118_K0.6060.46
282_Q285_E0.6020.46
371_F424_S0.6020.46
394_N398_S0.6020.46
486_N493_N0.6010.46
232_I298_Y0.6000.46
389_F404_S0.5980.45
356_N360_T0.5960.45
184_E225_R0.5960.45
246_R302_M0.5940.45
99_A123_A0.5920.45
36_I44_T0.5900.44
181_Q467_T0.5890.44
222_G225_R0.5890.44
246_R251_L0.5870.44
440_S512_Y0.5850.44
486_N491_F0.5850.44
64_P85_L0.5840.44
78_S137_G0.5840.44
71_S82_W0.5830.44
208_Y302_M0.5820.44
484_K491_F0.5790.43
39_L46_A0.5790.43
466_I491_F0.5780.43
482_I492_F0.5770.43
177_F180_C0.5760.43
180_C207_D0.5760.43
86_A89_P0.5760.43
319_R331_V0.5750.43
115_I283_S0.5750.43
39_L42_G0.5740.43
386_Q393_W0.5740.43
172_Q487_P0.5740.43
65_F74_P0.5740.43
72_G132_H0.5730.43
394_N399_A0.5730.43
188_Y251_L0.5720.43
474_D493_N0.5700.42
296_Q299_Y0.5690.42
387_Q390_F0.5670.42
185_H217_Y0.5670.42
441_W489_I0.5670.42
238_Y407_S0.5670.42
242_H501_C0.5660.42
272_N472_G0.5660.42
292_A315_M0.5660.42
74_P79_V0.5650.42
473_A496_R0.5650.42
89_P317_L0.5640.42
295_Y336_Q0.5630.42
161_K165_A0.5620.41
168_A325_N0.5620.41
422_I425_K0.5620.41
423_K455_K0.5620.41
188_Y212_Y0.5620.41
272_N434_T0.5610.41
248_D264_W0.5610.41
141_N161_K0.5610.41
500_R513_R0.5610.41
75_L79_V0.5600.41
485_E491_F0.5600.41
202_V260_W0.5590.41
208_Y298_Y0.5590.41
280_K284_V0.5590.41
207_D265_D0.5580.41
533_Y536_D0.5580.41
365_E368_Q0.5580.41
185_H470_G0.5580.41
127_L130_S0.5570.41
77_D137_G0.5570.41
479_T483_L0.5560.41
31_Q40_S0.5560.41
180_C435_G0.5560.41
183_Y258_F0.5560.41
396_G402_I0.5560.41
194_M500_R0.5550.41
234_T293_A0.5550.41
447_V454_S0.5540.41
318_Y365_E0.5540.41
269_V336_Q0.5530.41
228_N285_E0.5520.40
440_S499_V0.5510.40
67_L84_R0.5500.40
387_Q496_R0.5500.40
202_V254_A0.5500.40
131_V148_F0.5500.40
256_A259_P0.5490.40
226_T229_S0.5490.40
33_A40_S0.5490.40
259_P262_V0.5480.40
191_Y251_L0.5480.40
175_F203_F0.5480.40
76_S163_L0.5470.40
38_G42_G0.5470.40
419_I449_F0.5460.40
292_A296_Q0.5450.40
263_T385_A0.5450.40
166_P325_N0.5440.40
318_Y333_D0.5430.39
193_H515_M0.5430.39
482_I493_N0.5420.39
182_Q226_T0.5410.39
240_N244_Q0.5410.39
423_K457_F0.5400.39
380_H505_P0.5400.39
135_A516_P0.5400.39
107_A141_N0.5390.39
439_A489_I0.5390.39
440_S528_R0.5380.39
327_A383_V0.5380.39
471_N519_T0.5370.39
188_Y271_N0.5370.39
229_S240_N0.5360.39
264_W377_S0.5360.39
474_D528_R0.5360.39
461_F512_Y0.5350.39
69_V83_T0.5350.39
359_R413_A0.5340.39
332_L386_Q0.5340.39
298_Y433_L0.5340.39
365_E484_K0.5330.38
299_Y463_G0.5290.38
390_F422_I0.5290.38
132_H306_I0.5280.38
201_L327_A0.5280.38
208_Y241_R0.5270.38
385_A508_W0.5270.38
107_A147_R0.5260.38
132_H304_L0.5250.38
177_F501_C0.5250.38
394_N483_L0.5230.37
412_P415_R0.5230.37
148_F155_S0.5230.37
238_Y294_A0.5220.37
233_I270_E0.5220.37
72_G82_W0.5210.37
80_V256_A0.5210.37
483_L486_N0.5210.37
308_S315_M0.5190.37
246_R468_S0.5190.37
178_A254_A0.5180.37
79_V261_V0.5180.37
219_S226_T0.5170.37
85_L100_V0.5170.37
439_A472_G0.5160.37
71_S83_T0.5150.37
336_Q361_L0.5140.36
314_D337_Y0.5140.36
219_S224_V0.5140.36
198_K257_A0.5140.36
25_D42_G0.5130.36
191_Y462_V0.5130.36
231_E238_Y0.5130.36
499_V512_Y0.5130.36
237_D240_N0.5110.36
342_A405_M0.5100.36
208_Y497_G0.5100.36
24_F32_G0.5090.36
23_T33_A0.5090.36
498_Y513_R0.5080.36
214_P218_V0.5080.36
291_R336_Q0.5080.36
108_K145_Y0.5070.36
191_Y441_W0.5060.36
469_G472_G0.5050.36
318_Y363_G0.5050.36
54_V157_V0.5050.36
35_K43_L0.5040.35
479_T492_F0.5040.35
73_D321_F0.5040.35
65_F406_D0.5040.35
195_A257_A0.5030.35
320_H328_S0.5020.35
483_L490_Q0.5020.35
119_G133_V0.5020.35
59_N125_P0.5010.35
236_Q240_N0.5010.35
242_H302_M0.5010.35
291_R315_M0.5010.35
255_H260_W0.5000.35
85_L102_V0.5000.35
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2yeqA 2 0.8954 100 0.355 Contact Map
1xzwA 2 0.6947 100 0.776 Contact Map
2qfpA 2 0.6913 100 0.777 Contact Map
3zk4A 5 0.7719 100 0.792 Contact Map
1uteA 1 0.482 99.9 0.881 Contact Map
3tghA 1 0.5197 99.6 0.908 Contact Map
3ib7A 2 0.4717 99.3 0.926 Contact Map
3d03A 5 0.4425 99.2 0.929 Contact Map
2nxfA 1 0.4528 99.1 0.93 Contact Map
2xmoA 1 0.554 98.7 0.94 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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