ALDH1 - BACSU - GREMLIN Contacts

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ALDH1 - Probable aldehyde dehydrogenase YcbD

UniProt:	P42236	Sequences: MSVITEQNTYLNFINGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTLPEAKGETARGIAILRYYAGEGMRKTGDVIPSTDKDALMFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIKPATETAVTCAKIIACFEEAGLPAGVINLVTGPGSVVGQGLAEHDGVNAVTFTGSNQVGKIIGQAALARGAKYQLEMGGKNPVIVADDADLEAAAEAVITGAFRSTGQKCTATSRVIVQSGIYERFKEKLLQRTKDITIGDSLKEDVWMGPIASKNQLDNCLSYIEKGKQEGASLLIGGEKLENGKYQNGYYVQPAIFDNVTSEMTIAQEEIFGPVIALIKVDSIEEALNIANDVKFGLSASIFTENIGRMLSFIDEIDAGLVRINAESAGVELQAPFGGMKQSSSHSREQGEAAKDFFTAIKTVFVKP	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	488 (453)
Sequences:	36535 (21845)
Seq/√Len:	1026.4

ECOLI - PUUC GABD BETB ALDA ALDB FEAB ABDH ASTD SAD EUTE PUTA PAAZ PROA
BACSU - ALDH1 ALDH4 ROCA2 ROCA ALDH5 IOLA ALDY BETB GABD ALDH3 ALDH2 PROA
HALSA - Q9HQZ2 Q9HMJ6 Q9HRB5 Q9HR91
SULSO - Q97YT9 KGSDH GAPN Q97XS9 Q97XA5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
299_S	402_D	5.021	1.00
243_Q	247_A	3.570	1.00
299_S	400_K	3.156	1.00
271_E	308_K	3.096	1.00
302_Y	400_K	2.939	1.00
28_K	41_Y	2.828	1.00
359_E	373_Q	2.791	1.00
58_N	225_G	2.771	1.00
266_D	298_Q	2.735	1.00
381_T	384_M	2.692	1.00
34_D	37_D	2.688	1.00
334_K	338_D	2.616	1.00
346_K	385_T	2.584	1.00
275_E	312_R	2.574	1.00
191_K	194_A	2.548	1.00
345_E	349_Q	2.527	1.00
306_K	398_L	2.481	1.00
266_D	300_G	2.437	1.00
86_R	89_E	2.401	1.00
84_E	117_R	2.375	1.00
28_K	38_I	2.329	1.00
424_T	430_M	2.324	1.00
344_I	372_V	2.224	1.00
58_N	227_N	2.221	1.00
197_E	203_A	2.192	1.00
46_T	49_D	2.163	1.00
87_L	110_A	2.142	1.00
88_E	106_K	2.138	1.00
341_L	345_E	2.136	1.00
79_T	196_F	2.116	1.00
82_I	198_E	2.076	1.00
404_I	429_R	2.056	1.00
353_S	379_N	2.017	1.00
415_K	462_Q	2.011	1.00
341_L	360_K	1.995	1.00
222_E	244_A	1.989	1.00
184_E	333_S	1.983	1.00
218_Q	222_E	1.976	1.00
145_V	482_K	1.966	1.00
144_R	476_D	1.930	1.00
346_K	350_E	1.929	1.00
310_L	314_K	1.920	1.00
262_V	277_V	1.919	1.00
432_S	436_E	1.914	1.00
331_I	340_C	1.914	1.00
89_E	191_K	1.908	1.00
341_L	372_V	1.904	1.00
348_K	354_L	1.898	1.00
304_R	308_K	1.891	1.00
75_Y	201_L	1.851	1.00
355_L	378_D	1.812	1.00
240_I	243_Q	1.801	1.00
267_D	429_R	1.800	1.00
55_T	225_G	1.796	1.00
239_K	462_Q	1.792	1.00
51_E	219_G	1.784	1.00
82_I	85_Q	1.768	1.00
296_I	410_I	1.765	1.00
86_R	198_E	1.759	1.00
438_D	461_K	1.748	1.00
387_A	399_I	1.729	1.00
144_R	479_T	1.700	1.00
404_I	432_S	1.698	1.00
82_I	199_A	1.681	1.00
51_E	55_T	1.672	1.00
298_Q	401_V	1.662	1.00
38_I	41_Y	1.639	1.00
93_C	191_K	1.632	1.00
377_F	386_I	1.627	1.00
382_S	410_I	1.625	1.00
296_I	407_A	1.623	1.00
313_T	376_I	1.620	1.00
77_Y	117_R	1.615	1.00
310_L	355_L	1.614	1.00
193_I	208_L	1.612	1.00
82_I	195_C	1.606	1.00
406_E	409_N	1.594	1.00
353_S	378_D	1.589	1.00
102_L	106_K	1.588	1.00
402_D	406_E	1.573	1.00
277_V	305_F	1.565	1.00
282_F	313_T	1.564	1.00
302_Y	306_K	1.564	1.00
116_L	168_A	1.563	1.00
212_P	215_V	1.563	1.00
307_E	311_Q	1.552	1.00
84_E	113_I	1.549	1.00
68_T	71_E	1.548	1.00
61_K	65_R	1.547	1.00
342_S	385_T	1.523	1.00
176_T	205_V	1.517	1.00
385_T	389_E	1.516	1.00
308_K	311_Q	1.512	1.00
81_D	85_Q	1.508	1.00
334_K	370_Y	1.503	1.00
270_L	308_K	1.496	1.00
78_K	81_D	1.487	1.00
51_E	223_H	1.486	1.00
274_A	308_K	1.477	1.00
26_M	41_Y	1.469	1.00
295_V	396_I	1.468	1.00
303_E	400_K	1.464	1.00
265_A	429_R	1.454	1.00
354_L	377_F	1.453	1.00
37_D	368_N	1.452	1.00
194_A	198_E	1.452	1.00
71_E	74_Q	1.451	1.00
36_N	368_N	1.432	1.00
66_K	436_E	1.430	1.00
87_L	106_K	1.421	1.00
296_I	401_V	1.420	1.00
276_A	423_F	1.418	1.00
77_Y	124_M	1.417	1.00
92_A	96_R	1.404	1.00
67_L	71_E	1.400	1.00
266_D	429_R	1.397	1.00
277_V	295_V	1.396	1.00
304_R	307_E	1.396	1.00
312_R	315_D	1.395	1.00
405_E	436_E	1.394	1.00
80_A	117_R	1.387	1.00
420_A	439_A	1.387	1.00
88_E	92_A	1.384	1.00
122_E	125_R	1.383	1.00
143_T	435_D	1.379	1.00
406_E	410_I	1.377	1.00
297_V	305_F	1.374	1.00
302_Y	378_D	1.374	1.00
116_L	164_I	1.369	1.00
317_T	325_D	1.363	1.00
86_R	191_K	1.360	1.00
30_E	38_I	1.357	1.00
345_E	348_K	1.356	1.00
152_V	177_V	1.354	1.00
49_D	52_R	1.352	1.00
81_D	117_R	1.343	1.00
92_A	322_L	1.337	1.00
340_C	393_G	1.331	1.00
25_D	44_N	1.327	1.00
343_Y	391_I	1.320	1.00
242_G	466_H	1.312	1.00
228_A	253_Q	1.307	1.00
337_L	341_L	1.302	1.00
265_A	401_V	1.301	1.00
95_T	105_A	1.288	1.00
163_P	179_I	1.281	1.00
338_D	342_S	1.280	1.00
350_E	385_T	1.280	1.00
31_N	34_D	1.279	1.00
401_V	410_I	1.277	1.00
303_E	307_E	1.270	1.00
61_K	176_T	1.266	1.00
306_K	310_L	1.252	1.00
193_I	206_I	1.250	1.00
337_L	372_V	1.244	1.00
265_A	433_F	1.241	1.00
337_L	360_K	1.240	1.00
311_Q	314_K	1.236	1.00
314_K	356_I	1.235	1.00
334_K	337_L	1.224	1.00
263_I	407_A	1.214	1.00
301_I	304_R	1.209	1.00
80_A	84_E	1.208	1.00
44_N	212_P	1.203	1.00
298_Q	301_I	1.201	1.00
298_Q	403_S	1.200	1.00
383_E	388_Q	1.194	1.00
408_L	433_F	1.192	1.00
317_T	327_W	1.192	1.00
218_Q	244_A	1.188	1.00
403_S	406_E	1.187	1.00
473_A	476_D	1.182	1.00
319_G	326_V	1.180	1.00
141_F	431_L	1.175	1.00
54_V	223_H	1.175	1.00
183_T	213_G	1.174	1.00
342_S	346_K	1.167	1.00
183_T	212_P	1.165	1.00
90_I	191_K	1.163	1.00
55_T	59_E	1.163	1.00
308_K	312_R	1.162	1.00
196_F	206_I	1.161	1.00
472_E	476_D	1.159	1.00
352_A	377_F	1.158	1.00
144_R	481_I	1.155	1.00
92_A	102_L	1.153	1.00
67_L	75_Y	1.146	1.00
309_L	396_I	1.142	1.00
204_G	207_N	1.142	1.00
382_S	413_D	1.134	1.00
420_A	442_V	1.133	1.00
54_V	226_V	1.132	1.00
434_I	484_V	1.127	1.00
305_F	309_L	1.122	1.00
54_V	225_G	1.115	1.00
78_K	82_I	1.113	1.00
347_G	377_F	1.107	1.00
95_T	321_S	1.105	1.00
50_V	216_V	1.104	1.00
47_A	219_G	1.104	1.00
311_Q	315_D	1.104	1.00
306_K	378_D	1.104	1.00
240_I	244_A	1.103	1.00
56_A	207_N	1.101	1.00
237_V	240_I	1.100	1.00
405_E	432_S	1.099	1.00
430_M	444_I	1.093	1.00
306_K	355_L	1.093	1.00
79_T	195_C	1.092	1.00
147_L	228_A	1.092	1.00
218_Q	240_I	1.090	1.00
219_G	223_H	1.089	1.00
236_Q	240_I	1.086	1.00
190_A	210_T	1.085	1.00
458_G	468_R	1.085	1.00
388_Q	415_K	1.084	1.00
31_N	320_D	1.080	1.00
27_V	44_N	1.079	1.00
242_G	252_Y	1.076	1.00
405_E	409_N	1.074	1.00
362_E	367_Q	1.073	1.00
262_V	292_T	1.073	1.00
79_T	201_L	1.072	1.00
77_Y	121_G	1.068	1.00
167_M	206_I	1.067	1.00
388_Q	413_D	1.064	1.00
468_R	480_A	1.061	1.00
222_E	247_A	1.058	1.00
361_L	373_Q	1.057	1.00
473_A	481_I	1.055	1.00
310_L	356_I	1.054	1.00
152_V	230_T	1.052	1.00
269_D	425_E	1.050	1.00
314_K	373_Q	1.044	1.00
129_D	472_E	1.042	1.00
404_I	433_F	1.040	1.00
408_L	436_E	1.038	1.00
151_G	220_L	1.037	1.00
40_G	187_V	1.036	1.00
79_T	116_L	1.034	1.00
167_M	177_V	1.027	1.00
44_N	215_V	1.026	1.00
316_I	328_M	1.021	1.00
263_I	433_F	1.020	1.00
239_K	249_G	1.017	1.00
263_I	411_A	1.016	1.00
337_L	370_Y	1.010	1.00
357_G	375_A	1.009	1.00
62_T	438_D	1.008	1.00
129_D	473_A	1.006	1.00
350_E	384_M	1.004	1.00
320_D	323_K	0.999	1.00
401_V	407_A	0.998	1.00
63_A	67_L	0.998	1.00
158_F	288_K	0.997	1.00
151_G	226_V	0.997	1.00
426_N	429_R	0.993	1.00
60_A	176_T	0.993	1.00
259_K	293_S	0.988	1.00
47_A	215_V	0.984	1.00
33_A	321_S	0.983	1.00
90_I	195_C	0.983	1.00
73_G	124_M	0.980	1.00
357_G	373_Q	0.978	1.00
86_R	195_C	0.977	1.00
269_D	272_A	0.976	1.00
149_V	176_T	0.963	1.00
242_G	246_L	0.962	1.00
62_T	409_N	0.961	1.00
36_N	370_Y	0.960	1.00
85_Q	198_E	0.958	1.00
190_A	208_L	0.953	1.00
112_G	164_I	0.953	1.00
460_M	480_A	0.952	1.00
86_R	194_A	0.951	1.00
58_N	62_T	0.947	1.00
123_G	172_V	0.945	1.00
194_A	197_E	0.943	1.00
346_K	349_Q	0.940	1.00
143_T	484_V	0.939	1.00
278_I	312_R	0.939	1.00
261_P	420_A	0.938	1.00
340_C	395_V	0.938	1.00
89_E	92_A	0.938	1.00
380_V	384_M	0.937	1.00
91_A	106_K	0.933	1.00
421_S	447_E	0.933	1.00
272_A	276_A	0.932	1.00
147_L	251_K	0.932	1.00
343_Y	346_K	0.932	1.00
77_Y	120_A	0.923	1.00
280_G	292_T	0.922	1.00
31_N	96_R	0.922	1.00
271_E	304_R	0.921	1.00
227_N	438_D	0.918	1.00
47_A	51_E	0.916	1.00
281_A	293_S	0.916	1.00
96_R	322_L	0.915	1.00
342_S	345_E	0.915	1.00
82_I	86_R	0.905	1.00
409_N	413_D	0.904	1.00
140_M	455_A	0.899	1.00
150_V	228_A	0.894	1.00
431_L	435_D	0.894	1.00
74_Q	78_K	0.889	1.00
302_Y	398_L	0.889	1.00
303_E	306_K	0.888	1.00
145_V	435_D	0.885	1.00
348_K	377_F	0.882	1.00
73_G	77_Y	0.882	1.00
262_V	423_F	0.882	1.00
31_N	37_D	0.879	1.00
270_L	274_A	0.879	1.00
338_D	341_L	0.879	1.00
98_M	185_T	0.878	1.00
62_T	66_K	0.875	1.00
112_G	160_V	0.874	1.00
239_K	243_Q	0.874	1.00
265_A	404_I	0.873	1.00
184_E	335_N	0.872	1.00
100_K	108_E	0.872	1.00
30_E	370_Y	0.872	1.00
149_V	226_V	0.871	1.00
50_V	151_G	0.869	1.00
234_S	237_V	0.867	1.00
145_V	460_M	0.867	1.00
69_G	73_G	0.866	1.00
166_K	469_E	0.865	1.00
340_C	391_I	0.862	1.00
399_I	410_I	0.862	1.00
343_Y	385_T	0.856	1.00
52_R	56_A	0.854	1.00
80_A	120_A	0.853	1.00
274_A	312_R	0.852	1.00
242_G	245_A	0.850	1.00
265_A	424_T	0.849	1.00
274_A	309_L	0.848	1.00
427_I	430_M	0.847	1.00
83_M	112_G	0.847	1.00
193_I	197_E	0.842	1.00
455_A	483_T	0.842	1.00
420_A	437_I	0.840	1.00
251_K	480_A	0.837	1.00
382_S	399_I	0.835	1.00
407_A	410_I	0.824	1.00
65_R	438_D	0.821	1.00
48_E	52_R	0.821	1.00
73_G	120_A	0.821	1.00
27_V	212_P	0.820	1.00
60_A	205_V	0.818	1.00
169_P	474_A	0.815	1.00
242_G	249_G	0.811	1.00
401_V	406_E	0.810	1.00
33_A	371_Y	0.810	1.00
48_E	51_E	0.809	1.00
351_G	384_M	0.808	1.00
229_V	245_A	0.805	1.00
173_Y	479_T	0.803	1.00
45_S	49_D	0.802	1.00
52_R	55_T	0.801	1.00
274_A	305_F	0.801	1.00
190_A	194_A	0.799	1.00
147_L	175_N	0.799	1.00
264_V	305_F	0.799	1.00
56_A	204_G	0.798	1.00
273_A	277_V	0.797	1.00
179_I	189_C	0.797	1.00
238_G	256_M	0.795	1.00
352_A	384_M	0.795	1.00
66_K	435_D	0.794	1.00
147_L	480_A	0.791	1.00
63_A	66_K	0.791	1.00
422_I	433_F	0.790	1.00
229_V	241_I	0.790	1.00
57_A	207_N	0.789	1.00
307_E	310_L	0.787	1.00
408_L	412_N	0.786	1.00
163_P	167_M	0.783	1.00
64_W	205_V	0.782	1.00
318_I	361_L	0.781	1.00
77_Y	81_D	0.777	1.00
59_E	62_T	0.777	1.00
170_A	177_V	0.774	1.00
45_S	53_A	0.772	1.00
181_P	210_T	0.770	1.00
238_G	254_L	0.769	1.00
358_G	375_A	0.767	1.00
221_A	244_A	0.765	1.00
260_N	293_S	0.762	1.00
98_M	332_A	0.757	1.00
340_C	372_V	0.757	1.00
344_I	395_V	0.756	1.00
439_A	442_V	0.755	1.00
164_I	192_I	0.755	1.00
76_L	172_V	0.750	1.00
103_P	327_W	0.750	1.00
309_L	376_I	0.748	1.00
39_V	96_R	0.747	1.00
95_T	102_L	0.746	1.00
84_E	87_L	0.745	1.00
302_Y	379_N	0.745	1.00
335_N	338_D	0.745	1.00
221_A	241_I	0.743	1.00
231_F	237_V	0.742	1.00
270_L	301_I	0.739	1.00
152_V	166_K	0.738	1.00
70_A	124_M	0.738	1.00
273_A	305_F	0.737	1.00
261_P	411_A	0.737	1.00
245_A	252_Y	0.734	1.00
201_L	206_I	0.732	1.00
243_Q	246_L	0.731	1.00
151_G	229_V	0.731	1.00
274_A	278_I	0.731	1.00
160_V	188_T	0.730	1.00
201_L	205_V	0.730	1.00
91_A	95_T	0.728	1.00
91_A	102_L	0.727	1.00
235_N	462_Q	0.726	1.00
362_E	368_N	0.725	1.00
239_K	247_A	0.725	1.00
84_E	110_A	0.723	1.00
313_T	356_I	0.722	1.00
96_R	187_V	0.722	1.00
83_M	113_I	0.721	1.00
211_G	216_V	0.720	1.00
298_Q	404_I	0.720	1.00
140_M	483_T	0.718	1.00
271_E	312_R	0.717	1.00
343_Y	389_E	0.713	1.00
316_I	327_W	0.712	1.00
102_L	322_L	0.711	1.00
78_K	199_A	0.707	1.00
163_P	189_C	0.707	1.00
62_T	65_R	0.704	1.00
106_K	324_E	0.700	1.00
297_V	301_I	0.699	1.00
184_E	332_A	0.695	1.00
348_K	359_E	0.695	1.00
175_N	479_T	0.694	1.00
88_E	102_L	0.694	1.00
378_D	400_K	0.693	1.00
310_L	313_T	0.689	1.00
278_I	309_L	0.689	1.00
221_A	229_V	0.689	1.00
265_A	298_Q	0.687	1.00
64_W	75_Y	0.687	1.00
323_K	326_V	0.685	1.00
57_A	176_T	0.684	1.00
179_I	206_I	0.682	1.00
147_L	227_N	0.682	1.00
50_V	219_G	0.681	1.00
58_N	61_K	0.680	1.00
339_N	342_S	0.680	1.00
30_E	36_N	0.678	1.00
154_S	163_P	0.678	1.00
51_E	225_G	0.678	1.00
425_E	428_G	0.677	1.00
89_E	194_A	0.675	1.00
333_S	336_Q	0.674	1.00
60_A	63_A	0.673	1.00
26_M	43_Q	0.673	1.00
427_I	431_L	0.672	1.00
313_T	316_I	0.671	1.00
94_A	97_E	0.669	1.00
285_T	328_M	0.669	1.00
336_Q	339_N	0.668	1.00
296_I	387_A	0.664	1.00
251_K	477_F	0.664	1.00
50_V	54_V	0.663	1.00
69_G	123_G	0.662	1.00
93_C	187_V	0.661	1.00
244_A	247_A	0.661	1.00
183_T	339_N	0.660	1.00
31_N	322_L	0.660	1.00
81_D	84_E	0.660	1.00
382_S	387_A	0.659	1.00
36_N	334_K	0.658	1.00
65_R	436_E	0.657	1.00
334_K	360_K	0.656	1.00
296_I	382_S	0.656	1.00
25_D	215_V	0.656	1.00
347_G	391_I	0.655	1.00
163_P	192_I	0.654	1.00
267_D	424_T	0.654	1.00
434_I	444_I	0.652	1.00
75_Y	199_A	0.651	1.00
403_S	409_N	0.650	1.00
278_I	316_I	0.644	1.00
410_I	413_D	0.644	1.00
380_V	387_A	0.642	1.00
151_G	217_G	0.641	1.00
476_D	479_T	0.641	1.00
295_V	305_F	0.639	1.00
64_W	171_L	0.639	1.00
372_V	375_A	0.639	1.00
264_V	273_A	0.638	1.00
253_Q	477_F	0.637	1.00
272_A	275_E	0.636	1.00
404_I	408_L	0.632	1.00
139_L	431_L	0.632	1.00
100_K	104_E	0.631	1.00
56_A	203_A	0.630	1.00
337_L	361_L	0.629	1.00
309_L	398_L	0.628	1.00
318_I	328_M	0.627	1.00
90_I	160_V	0.626	1.00
126_K	479_T	0.625	1.00
196_F	201_L	0.625	1.00
140_M	485_F	0.624	1.00
438_D	460_M	0.624	1.00
183_T	240_I	0.624	1.00
341_L	344_I	0.624	1.00
344_I	377_F	0.623	1.00
65_R	146_P	0.623	1.00
100_K	158_F	0.623	1.00
277_V	309_L	0.623	1.00
320_D	326_V	0.622	1.00
270_L	304_R	0.622	1.00
71_E	75_Y	0.621	1.00
143_T	482_K	0.621	1.00
65_R	145_V	0.621	1.00
380_V	386_I	0.621	1.00
75_Y	200_G	0.620	1.00
356_I	376_I	0.619	1.00
80_A	113_I	0.619	1.00
95_T	322_L	0.619	1.00
424_T	429_R	0.619	1.00
335_N	339_N	0.617	1.00
62_T	436_E	0.617	1.00
43_Q	210_T	0.617	1.00
178_V	207_N	0.616	1.00
109_T	113_I	0.615	1.00
242_G	254_L	0.614	1.00
476_D	481_I	0.614	1.00
215_V	218_Q	0.613	1.00
430_M	434_I	0.613	1.00
191_K	195_C	0.612	1.00
267_D	426_N	0.611	1.00
272_A	425_E	0.609	1.00
290_T	451_V	0.609	1.00
343_Y	347_G	0.607	1.00
361_L	367_Q	0.607	1.00
350_E	383_E	0.607	1.00
166_K	230_T	0.606	1.00
94_A	105_A	0.606	1.00
167_M	179_I	0.604	1.00
87_L	91_A	0.604	1.00
69_G	172_V	0.602	1.00
94_A	188_T	0.601	1.00
29_V	97_E	0.596	1.00
29_V	40_G	0.593	1.00
219_G	222_E	0.593	1.00
92_A	95_T	0.593	1.00
47_A	222_E	0.592	1.00
358_G	373_Q	0.591	1.00
297_V	302_Y	0.589	1.00
391_I	395_V	0.589	1.00
331_I	336_Q	0.589	1.00
45_S	209_V	0.588	1.00
428_G	431_L	0.587	1.00
53_A	209_V	0.586	1.00
428_G	432_S	0.584	1.00
47_A	218_Q	0.582	1.00
280_G	447_E	0.581	1.00
211_G	217_G	0.581	1.00
55_T	58_N	0.580	1.00
83_M	192_I	0.579	1.00
126_K	475_K	0.579	1.00
318_I	327_W	0.578	1.00
228_A	477_F	0.576	1.00
83_M	116_L	0.576	1.00
408_L	432_S	0.576	1.00
94_A	108_E	0.575	1.00
59_E	63_A	0.575	1.00
422_I	430_M	0.575	1.00
262_V	295_V	0.574	1.00
39_V	187_V	0.573	1.00
42_V	186_A	0.573	1.00
235_N	239_K	0.572	1.00
354_L	375_A	0.572	1.00
176_T	207_N	0.571	1.00
297_V	398_L	0.570	1.00
407_A	411_A	0.570	1.00
150_V	175_N	0.570	1.00
82_I	200_G	0.568	1.00
262_V	421_S	0.568	1.00
160_V	192_I	0.568	1.00
382_S	409_N	0.567	1.00
141_F	484_V	0.567	1.00
344_I	375_A	0.567	1.00
118_Y	122_E	0.566	1.00
377_F	380_V	0.566	1.00
271_E	311_Q	0.564	1.00
422_I	444_I	0.564	1.00
83_M	160_V	0.564	1.00
80_A	116_L	0.561	1.00
360_K	373_Q	0.561	1.00
288_K	291_A	0.560	1.00
379_N	400_K	0.560	1.00
79_T	82_I	0.560	1.00
281_A	396_I	0.558	1.00
310_L	376_I	0.551	1.00
319_G	323_K	0.550	1.00
91_A	109_T	0.550	1.00
341_L	348_K	0.549	1.00
25_D	46_T	0.548	1.00
110_A	113_I	0.547	1.00
121_G	124_M	0.546	1.00
260_N	419_S	0.545	1.00
411_A	437_I	0.545	1.00
270_L	305_F	0.545	1.00
266_D	401_V	0.544	1.00
149_V	227_N	0.544	1.00
53_A	207_N	0.544	1.00
56_A	60_A	0.543	1.00
183_T	236_Q	0.543	1.00
331_I	372_V	0.542	1.00
267_D	425_E	0.542	1.00
408_L	437_I	0.542	1.00
173_Y	475_K	0.541	1.00
122_E	472_E	0.539	1.00
295_V	398_L	0.539	1.00
268_A	273_A	0.538	1.00
197_E	204_G	0.538	1.00
58_N	149_V	0.538	1.00
109_T	160_V	0.538	1.00
270_L	273_A	0.536	1.00
70_A	74_Q	0.535	1.00
29_V	186_A	0.535	1.00
119_Y	169_P	0.534	1.00
192_I	196_F	0.532	1.00
404_I	436_E	0.531	1.00
442_V	482_K	0.530	1.00
354_L	357_G	0.530	1.00
75_Y	79_T	0.530	1.00
317_T	323_K	0.529	1.00
292_T	421_S	0.529	1.00
350_E	381_T	0.528	1.00
221_A	248_R	0.528	1.00
57_A	178_V	0.527	1.00
161_A	165_W	0.527	1.00
165_W	470_Q	0.524	1.00
74_Q	77_Y	0.524	1.00
213_G	218_Q	0.523	1.00
57_A	149_V	0.523	1.00
443_R	446_A	0.523	1.00
230_T	478_F	0.522	1.00
98_M	284_S	0.522	1.00
83_M	90_I	0.522	1.00
150_V	177_V	0.522	1.00
438_D	480_A	0.520	1.00
42_V	187_V	0.520	1.00
63_A	176_T	0.519	1.00
236_Q	335_N	0.519	1.00
282_F	316_I	0.519	1.00
111_R	161_A	0.519	1.00
299_S	302_Y	0.517	1.00
152_V	167_M	0.516	1.00
78_K	200_G	0.515	1.00
433_F	437_I	0.515	1.00
90_I	109_T	0.515	1.00
274_A	301_I	0.514	1.00
355_L	379_N	0.514	1.00
111_R	451_V	0.513	1.00
106_K	110_A	0.513	1.00
386_I	391_I	0.512	1.00
87_L	113_I	0.509	1.00
217_G	221_A	0.508	1.00
145_V	438_D	0.508	1.00
348_K	351_G	0.508	1.00
69_G	127_T	0.507	1.00
171_L	206_I	0.507	1.00
108_E	158_F	0.506	1.00
44_N	183_T	0.506	1.00
336_Q	340_C	0.504	1.00
419_S	443_R	0.504	1.00
466_H	480_A	0.502	1.00
354_L	358_G	0.502	1.00
151_G	178_V	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4yweA	5	0.9693	100	0.04	Contact Map
4o5hA	4	0.9857	100	0.04	Contact Map
4qf6A	4	0.9836	100	0.042	Contact Map
4pxlA	4	0.9754	100	0.042	Contact Map
4lihA	5	0.9795	100	0.043	Contact Map
4qtoA	4	0.9918	100	0.043	Contact Map
3ek1A	5	0.9816	100	0.044	Contact Map
2o2pA	5	0.9857	100	0.045	Contact Map
1a4sA	4	0.9898	100	0.046	Contact Map
4wj9A	4	0.9836	100	0.047	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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