HUTM - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

HUTM - Putative histidine permease

UniProt:	P42087	Sequences: MNLQENSSQQLKRTMKSRHLFMISLGGVIGTGLFLSTGYTLHQAGPGGTILAYVIGGLMMYLVMQCLGELSVAMPVTGSFQKYATTFIGPSTGFMVGIMYWINWVVTVGSEFTASGILMQRWFPDSSVWMWSAIFAALLFICNAFSVKLFAETEFWFSSVKIVTIILFIILGGAAMFGLISLNGTADAPMLSNFTDHGGLFPNGFLAVFIAMISVSFAFSGTELIGVTAGESANPQKDIPRSIRNVAWRTVIFFIGAVFILSGLISWKDAGVIESPFVAVFAEIGIPYAADIMNFVILTALLSVANSGLYASTRMMWSLANENMISSRFKKVTSKGIPLNALMISMAVSCLSLVSSIVAPGTVYVVMVAIAGFAGVVVWMSIALSQLLFRKRFLKKGGDVKDLTFRTPLYPLMPIAALLLCSASCIGLAFDPNQRIALFCGVPCIILCYLIYHFKRNVTKAKKISQEEYPADHIL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	475 (427)
Sequences:	24865 (16274)
Seq/√Len:	787.6

ECOLI - MMUP AROP LYSP GABP PROY YIFK ANSP PHEP CYCA PUUP PLAP ADIC FRLA POTE YGJI GADC YCAM CADB YJEM ARCD YBAT YJEH TNAB
BACSU - HUTM YBGF ROCE ROCC GABP YBXG YTNA AAPA YDGF YVBW ASPP YHDG YBEC YCGH YFNA STET ARCD YECA YDAO GERBB GERAB YNDE GERKB YFKT
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97X49 Q97WS3 Q97ZB5 Q97U05 Q97XM0 Q97Z63 Q7LXI7 Q97U33 Q97VA6 Q97WD4 Q97VA8 Q97VR4 Q97Y76 Q97YN3 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
140_F	346_M	4.437	1.00
328_R	340_N	4.370	1.00
388_L	392_R	3.483	1.00
57_G	251_V	3.187	1.00
331_K	340_N	3.083	1.00
380_M	418_L	3.044	1.00
237_K	241_R	3.025	1.00
16_K	233_A	2.873	1.00
81_Q	322_E	2.731	1.00
234_N	237_K	2.703	1.00
232_S	238_D	2.675	1.00
320_A	330_K	2.665	1.00
172_G	260_I	2.654	1.00
97_G	319_L	2.629	1.00
21_F	245_N	2.581	1.00
333_T	339_L	2.543	1.00
133_A	350_C	2.490	1.00
328_R	331_K	2.478	1.00
230_G	321_N	2.372	1.00
170_I	174_A	2.368	1.00
17_S	245_N	2.345	1.00
279_A	282_A	2.337	1.00
288_Y	292_I	2.337	1.00
383_A	417_A	2.299	1.00
439_F	443_P	2.248	1.00
69_E	390_R	2.245	1.00
190_M	193_N	2.199	1.00
141_I	145_F	2.194	1.00
317_W	321_N	2.180	1.00
85_T	93_G	2.163	1.00
231_E	314_R	2.158	1.00
343_M	347_A	2.150	1.00
137_A	350_C	2.140	1.00
17_S	238_D	2.122	1.00
17_S	21_F	2.115	1.00
140_F	342_L	2.073	1.00
20_L	232_S	2.061	1.00
148_K	152_E	2.039	1.00
144_A	339_L	2.036	1.00
88_I	388_L	2.029	1.00
241_R	245_N	2.016	1.00
415_I	419_L	2.014	1.00
449_Y	453_H	2.011	1.00
133_A	353_L	1.959	1.00
21_F	249_R	1.955	1.00
132_S	353_L	1.952	1.00
85_T	90_P	1.950	1.00
88_I	384_L	1.930	1.00
412_L	416_A	1.927	1.00
329_F	344_I	1.915	1.00
58_L	62_L	1.908	1.00
101_W	345_S	1.898	1.00
159_S	163_V	1.898	1.00
16_K	19_H	1.897	1.00
323_N	327_S	1.894	1.00
66_C	383_A	1.892	1.00
445_I	449_Y	1.889	1.00
11_L	332_V	1.887	1.00
40_T	49_T	1.881	1.00
266_S	269_D	1.863	1.00
126_S	129_W	1.829	1.00
269_D	283_E	1.828	1.00
279_A	283_E	1.793	1.00
191_L	194_F	1.786	1.00
333_T	337_I	1.758	1.00
244_R	248_W	1.754	1.00
137_A	346_M	1.728	1.00
84_A	96_V	1.722	1.00
143_N	306_N	1.717	1.00
451_I	455_K	1.705	1.00
19_H	155_F	1.690	1.00
234_N	238_D	1.687	1.00
450_L	454_F	1.671	1.00
447_L	451_I	1.657	1.00
52_A	211_A	1.657	1.00
96_V	381_S	1.656	1.00
419_L	423_A	1.651	1.00
24_S	246_V	1.649	1.00
108_V	349_S	1.647	1.00
144_A	343_M	1.641	1.00
112_F	305_A	1.631	1.00
163_V	167_L	1.626	1.00
15_M	19_H	1.615	1.00
136_A	349_S	1.614	1.00
384_L	418_L	1.596	1.00
335_K	339_L	1.593	1.00
388_L	391_K	1.583	1.00
248_W	252_I	1.555	1.00
59_M	420_L	1.541	1.00
89_G	92_T	1.527	1.00
446_I	450_L	1.519	1.00
190_M	194_F	1.505	1.00
119_M	131_W	1.500	1.00
145_F	335_K	1.487	1.00
435_R	438_L	1.482	1.00
58_L	416_A	1.457	1.00
316_M	341_A	1.457	1.00
228_T	310_Y	1.455	1.00
84_A	381_S	1.444	1.00
234_N	241_R	1.444	1.00
340_N	344_I	1.441	1.00
312_S	345_S	1.438	1.00
173_G	260_I	1.426	1.00
317_W	332_V	1.423	1.00
327_S	330_K	1.420	1.00
282_A	290_A	1.420	1.00
64_M	247_A	1.416	1.00
449_Y	452_Y	1.414	1.00
112_F	136_A	1.413	1.00
133_A	137_A	1.410	1.00
77_T	230_G	1.404	1.00
62_L	416_A	1.400	1.00
384_L	388_L	1.396	1.00
56_G	215_V	1.395	1.00
331_K	339_L	1.389	1.00
164_T	296_V	1.387	1.00
327_S	331_K	1.384	1.00
136_A	346_M	1.382	1.00
11_L	317_W	1.362	1.00
189_P	192_S	1.352	1.00
448_C	452_Y	1.349	1.00
12_K	336_G	1.339	1.00
115_S	298_L	1.339	1.00
88_I	92_T	1.334	1.00
313_T	342_L	1.330	1.00
162_I	166_I	1.325	1.00
140_F	343_M	1.317	1.00
189_P	193_N	1.316	1.00
115_S	135_F	1.309	1.00
74_M	86_T	1.308	1.00
19_H	151_A	1.307	1.00
15_M	20_L	1.302	1.00
169_I	256_G	1.292	1.00
87_F	385_S	1.289	1.00
238_D	241_R	1.285	1.00
291_D	295_F	1.273	1.00
63_V	383_A	1.271	1.00
64_M	243_I	1.271	1.00
17_S	241_R	1.269	1.00
235_P	240_P	1.259	1.00
448_C	451_I	1.252	1.00
423_A	427_G	1.252	1.00
252_I	256_G	1.251	1.00
275_S	279_A	1.246	1.00
18_R	22_M	1.243	1.00
65_Q	244_R	1.236	1.00
316_M	325_I	1.233	1.00
400_V	403_L	1.233	1.00
111_E	304_V	1.230	1.00
15_M	151_A	1.224	1.00
28_V	250_T	1.223	1.00
76_V	82_K	1.217	1.00
436_I	443_P	1.217	1.00
35_L	114_A	1.205	1.00
193_N	197_H	1.203	1.00
47_G	208_V	1.200	1.00
139_L	305_A	1.198	1.00
82_K	86_T	1.182	1.00
410_Y	414_P	1.178	1.00
409_L	413_M	1.174	1.00
50_I	259_F	1.169	1.00
273_I	279_A	1.166	1.00
20_L	242_S	1.163	1.00
101_W	316_M	1.160	1.00
172_G	264_L	1.158	1.00
41_L	49_T	1.157	1.00
451_I	454_F	1.154	1.00
168_F	172_G	1.147	1.00
91_S	452_Y	1.145	1.00
176_M	179_L	1.144	1.00
66_C	414_P	1.143	1.00
380_M	422_S	1.141	1.00
130_M	134_I	1.141	1.00
403_L	406_R	1.138	1.00
387_L	415_I	1.136	1.00
233_A	238_D	1.134	1.00
437_A	441_G	1.131	1.00
73_A	403_L	1.129	1.00
67_L	80_F	1.121	1.00
443_P	446_I	1.119	1.00
167_L	171_L	1.118	1.00
193_N	196_D	1.118	1.00
190_M	195_T	1.116	1.00
154_E	306_N	1.107	1.00
399_D	403_L	1.107	1.00
398_G	401_K	1.105	1.00
23_I	228_T	1.101	1.00
14_T	233_A	1.097	1.00
142_C	153_T	1.095	1.00
282_A	287_P	1.094	1.00
436_I	439_F	1.093	1.00
24_S	225_I	1.091	1.00
153_T	157_F	1.090	1.00
76_V	86_T	1.080	1.00
386_Q	414_P	1.077	1.00
84_A	92_T	1.077	1.00
411_P	415_I	1.069	1.00
340_N	343_M	1.067	1.00
444_C	448_C	1.060	1.00
94_F	98_I	1.051	1.00
435_R	439_F	1.048	1.00
332_V	336_G	1.044	1.00
445_I	448_C	1.042	1.00
71_S	83_Y	1.042	1.00
25_L	249_R	1.039	1.00
81_Q	318_S	1.039	1.00
152_E	156_W	1.037	1.00
187_D	190_M	1.036	1.00
173_G	177_F	1.035	1.00
443_P	447_L	1.024	1.00
166_I	170_I	1.021	1.00
422_S	426_I	1.021	1.00
412_L	415_I	1.020	1.00
25_L	250_T	1.018	1.00
116_G	131_W	1.016	1.00
321_N	330_K	1.013	1.00
174_A	178_G	1.013	1.00
134_I	138_L	1.010	1.00
405_F	408_P	1.005	1.00
434_Q	438_L	1.004	1.00
137_A	141_I	1.000	1.00
204_G	207_A	0.999	1.00
44_A	47_G	0.998	1.00
127_S	130_M	0.995	1.00
432_P	435_R	0.995	1.00
147_V	310_Y	0.995	1.00
69_E	72_V	0.993	1.00
229_A	239_I	0.993	1.00
140_F	144_A	0.990	1.00
188_A	191_L	0.990	1.00
73_A	401_K	0.983	1.00
409_L	412_L	0.977	1.00
285_G	289_A	0.973	1.00
438_L	441_G	0.973	1.00
188_A	194_F	0.973	1.00
433_N	436_I	0.968	1.00
418_L	422_S	0.968	1.00
425_C	428_L	0.967	1.00
383_A	418_L	0.963	1.00
401_K	404_T	0.963	1.00
266_S	283_E	0.955	1.00
434_Q	437_A	0.944	1.00
22_M	155_F	0.943	1.00
347_A	351_L	0.942	1.00
220_S	375_G	0.941	1.00
417_A	421_C	0.939	1.00
62_L	413_M	0.937	1.00
380_M	421_C	0.935	1.00
119_M	298_L	0.934	1.00
54_V	255_I	0.933	1.00
144_A	337_I	0.932	1.00
139_L	306_N	0.932	1.00
309_L	346_M	0.926	1.00
161_K	300_A	0.924	1.00
223_E	227_V	0.923	1.00
429_A	433_N	0.922	1.00
50_I	262_S	0.920	1.00
144_A	333_T	0.920	1.00
169_I	260_I	0.918	1.00
157_F	303_S	0.918	1.00
380_M	384_L	0.907	1.00
110_S	217_F	0.903	1.00
433_N	437_A	0.903	1.00
189_P	194_F	0.902	1.00
57_G	219_F	0.901	1.00
434_Q	439_F	0.896	1.00
286_I	289_A	0.894	1.00
78_G	82_K	0.893	1.00
125_D	128_V	0.890	1.00
162_I	253_F	0.890	1.00
29_I	32_G	0.886	1.00
401_K	406_R	0.885	1.00
431_D	434_Q	0.882	1.00
14_T	148_K	0.880	1.00
325_I	329_F	0.878	1.00
245_N	249_R	0.878	1.00
138_L	302_L	0.877	1.00
209_F	423_A	0.874	1.00
98_I	325_I	0.870	1.00
190_M	196_D	0.870	1.00
333_T	336_G	0.870	1.00
116_G	132_S	0.868	1.00
452_Y	455_K	0.868	1.00
85_T	322_E	0.862	1.00
339_L	343_M	0.860	1.00
169_I	173_G	0.859	1.00
408_P	412_L	0.854	1.00
402_D	406_R	0.849	1.00
18_R	155_F	0.847	1.00
329_F	340_N	0.847	1.00
19_H	152_E	0.846	1.00
251_V	255_I	0.846	1.00
391_K	411_P	0.846	1.00
432_P	436_I	0.842	1.00
119_M	123_F	0.842	1.00
287_P	291_D	0.841	1.00
110_S	368_V	0.839	1.00
61_Y	65_Q	0.838	1.00
447_L	452_Y	0.836	1.00
92_T	381_S	0.836	1.00
168_F	281_F	0.833	1.00
441_G	445_I	0.833	1.00
187_D	191_L	0.833	1.00
259_F	263_G	0.832	1.00
89_G	453_H	0.832	1.00
264_L	280_V	0.829	1.00
131_W	134_I	0.829	1.00
423_A	426_I	0.828	1.00
430_F	433_N	0.825	1.00
449_Y	455_K	0.823	1.00
210_I	214_S	0.821	1.00
61_Y	244_R	0.819	1.00
11_L	231_E	0.817	1.00
205_F	208_V	0.815	1.00
70_L	386_Q	0.815	1.00
86_T	398_G	0.814	1.00
126_S	130_M	0.814	1.00
62_L	66_C	0.814	1.00
17_S	242_S	0.811	1.00
421_C	424_S	0.811	1.00
436_I	449_Y	0.810	1.00
152_E	155_F	0.808	1.00
399_D	402_D	0.808	1.00
432_P	439_F	0.808	1.00
346_M	350_C	0.807	1.00
176_M	263_G	0.807	1.00
100_Y	104_W	0.805	1.00
78_G	81_Q	0.801	1.00
11_L	314_R	0.800	1.00
192_S	195_T	0.800	1.00
29_I	161_K	0.799	1.00
54_V	58_L	0.798	1.00
51_L	208_V	0.797	1.00
141_I	144_A	0.797	1.00
431_D	435_R	0.792	1.00
387_L	391_K	0.791	1.00
276_P	281_F	0.791	1.00
113_T	367_M	0.790	1.00
447_L	450_L	0.789	1.00
115_S	301_L	0.788	1.00
139_L	309_L	0.787	1.00
433_N	438_L	0.787	1.00
441_G	444_C	0.786	1.00
442_V	446_I	0.785	1.00
402_D	405_F	0.783	1.00
224_L	311_A	0.783	1.00
281_F	284_I	0.779	1.00
188_A	192_S	0.778	1.00
174_A	179_L	0.776	1.00
447_L	453_H	0.772	1.00
385_S	389_F	0.771	1.00
84_A	385_S	0.769	1.00
145_F	149_L	0.767	1.00
449_Y	454_F	0.763	1.00
72_V	404_T	0.763	1.00
430_F	434_Q	0.762	1.00
29_I	34_F	0.759	1.00
105_V	348_V	0.757	1.00
276_P	280_V	0.757	1.00
136_A	353_L	0.751	1.00
115_S	302_L	0.750	1.00
173_G	256_G	0.746	1.00
220_S	379_W	0.744	1.00
370_I	374_A	0.743	1.00
392_R	398_G	0.740	1.00
414_P	421_C	0.739	1.00
51_L	55_I	0.739	1.00
70_L	83_Y	0.739	1.00
411_P	414_P	0.739	1.00
125_D	129_W	0.737	1.00
446_I	449_Y	0.736	1.00
410_Y	413_M	0.735	1.00
276_P	284_I	0.734	1.00
21_F	242_S	0.731	1.00
107_T	371_A	0.731	1.00
30_G	34_F	0.730	1.00
28_V	246_V	0.728	1.00
63_V	421_C	0.725	1.00
334_S	339_L	0.723	1.00
275_S	278_V	0.722	1.00
424_S	428_L	0.722	1.00
439_F	442_V	0.721	1.00
438_L	445_I	0.720	1.00
169_I	257_A	0.716	1.00
240_P	243_I	0.715	1.00
194_F	197_H	0.712	1.00
14_T	147_V	0.711	1.00
81_Q	85_T	0.709	1.00
234_N	240_P	0.708	1.00
109_G	367_M	0.708	1.00
288_Y	291_D	0.707	1.00
441_G	446_I	0.705	1.00
194_F	199_G	0.703	1.00
26_G	158_S	0.702	1.00
120_Q	124_P	0.701	1.00
116_G	119_M	0.700	1.00
347_A	350_C	0.699	1.00
46_P	262_S	0.698	1.00
88_I	91_S	0.697	1.00
143_N	342_L	0.697	1.00
67_L	382_I	0.696	1.00
400_V	404_T	0.696	1.00
448_C	455_K	0.695	1.00
60_M	222_T	0.689	1.00
328_R	344_I	0.688	1.00
316_M	344_I	0.686	1.00
434_Q	441_G	0.685	1.00
87_F	388_L	0.684	1.00
65_Q	413_M	0.683	1.00
143_N	310_Y	0.682	1.00
133_A	354_V	0.682	1.00
18_R	152_E	0.680	1.00
439_F	444_C	0.680	1.00
144_A	335_K	0.680	1.00
440_C	444_C	0.679	1.00
87_F	389_F	0.678	1.00
338_P	341_A	0.678	1.00
149_L	152_E	0.678	1.00
191_L	263_G	0.676	1.00
174_A	177_F	0.674	1.00
14_T	18_R	0.671	1.00
387_L	414_P	0.668	1.00
33_L	257_A	0.668	1.00
448_C	453_H	0.667	1.00
51_L	54_V	0.666	1.00
119_M	135_F	0.666	1.00
320_A	329_F	0.665	1.00
309_L	313_T	0.664	1.00
151_A	155_F	0.662	1.00
403_L	407_T	0.661	1.00
329_F	341_A	0.661	1.00
176_M	260_I	0.660	1.00
447_L	454_F	0.660	1.00
437_A	442_V	0.657	1.00
407_T	410_Y	0.657	1.00
37_T	258_V	0.657	1.00
103_N	375_G	0.652	1.00
144_A	342_L	0.652	1.00
50_I	255_I	0.651	1.00
417_A	420_L	0.650	1.00
230_G	317_W	0.650	1.00
354_V	357_I	0.649	1.00
99_M	378_V	0.649	1.00
438_L	442_V	0.649	1.00
55_I	212_M	0.649	1.00
313_T	341_A	0.647	1.00
139_L	302_L	0.644	1.00
135_F	305_A	0.643	1.00
77_T	317_W	0.642	1.00
386_Q	390_R	0.642	1.00
438_L	443_P	0.642	1.00
112_F	116_G	0.641	1.00
414_P	418_L	0.640	1.00
36_S	368_V	0.640	1.00
450_L	453_H	0.640	1.00
249_R	253_F	0.638	1.00
151_A	306_N	0.638	1.00
175_A	178_G	0.636	1.00
89_G	93_G	0.636	1.00
47_G	200_L	0.634	1.00
245_N	248_W	0.633	1.00
88_I	385_S	0.633	1.00
314_R	317_W	0.633	1.00
50_I	54_V	0.631	1.00
209_F	427_G	0.628	1.00
49_T	258_V	0.628	1.00
440_C	443_P	0.627	1.00
387_L	411_P	0.626	1.00
249_R	252_I	0.626	1.00
73_A	404_T	0.625	1.00
106_V	370_I	0.623	1.00
53_Y	218_A	0.623	1.00
64_M	222_T	0.622	1.00
121_R	294_N	0.621	1.00
160_V	296_V	0.621	1.00
193_N	199_G	0.620	1.00
73_A	399_D	0.620	1.00
27_G	308_G	0.619	1.00
409_L	414_P	0.617	1.00
18_R	21_F	0.616	1.00
71_S	226_G	0.614	1.00
81_Q	97_G	0.614	1.00
437_A	443_P	0.612	1.00
107_T	110_S	0.611	1.00
226_G	243_I	0.610	1.00
80_F	223_E	0.609	1.00
155_F	159_S	0.608	1.00
43_Q	46_P	0.607	1.00
104_W	308_G	0.606	1.00
27_G	307_S	0.603	1.00
21_F	24_S	0.603	1.00
436_I	441_G	0.602	1.00
260_I	263_G	0.601	1.00
191_L	196_D	0.601	1.00
257_A	261_L	0.601	1.00
140_F	309_L	0.601	1.00
147_V	228_T	0.600	1.00
191_L	195_T	0.600	1.00
70_L	87_F	0.600	1.00
188_A	193_N	0.599	1.00
436_I	440_C	0.599	1.00
39_Y	42_H	0.598	1.00
295_F	299_T	0.598	1.00
81_Q	93_G	0.594	1.00
91_S	95_M	0.594	1.00
235_P	238_D	0.594	1.00
220_S	223_E	0.593	1.00
98_I	443_P	0.593	1.00
39_Y	365_V	0.592	1.00
29_I	253_F	0.592	1.00
69_E	405_F	0.590	1.00
50_I	53_Y	0.589	1.00
137_A	140_F	0.589	1.00
300_A	303_S	0.588	1.00
111_E	301_L	0.588	1.00
111_E	114_A	0.588	1.00
65_Q	408_P	0.588	1.00
136_A	350_C	0.587	1.00
236_Q	402_D	0.587	1.00
446_I	452_Y	0.586	1.00
171_L	286_I	0.585	1.00
445_I	452_Y	0.584	1.00
437_A	444_C	0.584	1.00
416_A	419_L	0.583	1.00
442_V	445_I	0.583	1.00
205_F	209_F	0.583	1.00
129_W	133_A	0.583	1.00
68_G	72_V	0.581	1.00
192_S	196_D	0.581	1.00
227_V	311_A	0.579	1.00
374_A	378_V	0.579	1.00
406_R	411_P	0.578	1.00
25_L	158_S	0.577	1.00
429_A	432_P	0.576	1.00
434_Q	443_P	0.576	1.00
196_D	199_G	0.575	1.00
118_L	297_I	0.575	1.00
121_R	124_P	0.574	1.00
193_N	198_G	0.574	1.00
160_V	164_T	0.574	1.00
69_E	408_P	0.571	1.00
312_S	316_M	0.570	1.00
146_S	149_L	0.569	1.00
138_L	142_C	0.569	1.00
420_L	424_S	0.568	1.00
158_S	161_K	0.568	1.00
236_Q	404_T	0.568	1.00
71_S	239_I	0.565	1.00
432_P	438_L	0.564	1.00
109_G	352_S	0.562	1.00
24_S	28_V	0.561	1.00
27_G	224_L	0.560	1.00
437_A	440_C	0.560	1.00
111_E	305_A	0.560	1.00
256_G	260_I	0.560	1.00
365_V	368_V	0.560	1.00
437_A	445_I	0.560	1.00
277_F	281_F	0.559	1.00
277_F	280_V	0.559	1.00
187_D	192_S	0.558	1.00
231_E	338_P	0.558	1.00
257_A	277_F	0.558	1.00
444_C	447_L	0.555	1.00
398_G	402_D	0.554	1.00
80_F	227_V	0.553	1.00
66_C	417_A	0.553	1.00
232_S	239_I	0.552	1.00
11_L	14_T	0.551	1.00
239_I	243_I	0.549	1.00
79_S	226_G	0.546	1.00
421_C	425_C	0.546	1.00
231_E	332_V	0.545	1.00
433_N	439_F	0.544	1.00
399_D	404_T	0.544	1.00
265_I	269_D	0.544	1.00
435_R	441_G	0.543	1.00
344_I	348_V	0.543	1.00
56_G	219_F	0.543	1.00
400_V	405_F	0.543	1.00
114_A	118_L	0.542	1.00
105_V	352_S	0.542	1.00
400_V	406_R	0.542	1.00
414_P	428_L	0.542	1.00
115_S	119_M	0.542	1.00
188_A	195_T	0.541	1.00
417_A	428_L	0.541	1.00
135_F	139_L	0.541	1.00
30_G	254_F	0.540	1.00
122_W	295_F	0.539	1.00
149_L	153_T	0.539	1.00
23_I	26_G	0.537	1.00
64_M	68_G	0.537	1.00
220_S	371_A	0.536	1.00
273_I	276_P	0.536	1.00
177_F	263_G	0.535	1.00
232_S	242_S	0.529	1.00
96_V	378_V	0.528	1.00
316_M	320_A	0.527	1.00
292_I	296_V	0.526	1.00
414_P	417_A	0.526	1.00
270_A	273_I	0.525	1.00
107_T	111_E	0.524	1.00
261_L	277_F	0.522	1.00
150_F	310_Y	0.521	1.00
105_V	345_S	0.521	1.00
433_N	444_C	0.520	1.00
137_A	343_M	0.520	1.00
52_A	55_I	0.520	1.00
390_R	410_Y	0.520	1.00
433_N	449_Y	0.520	1.00
122_W	294_N	0.520	1.00
254_F	258_V	0.519	1.00
29_I	36_S	0.518	1.00
225_I	239_I	0.516	1.00
419_L	422_S	0.516	1.00
199_G	202_P	0.516	1.00
99_M	103_N	0.515	1.00
281_F	286_I	0.515	1.00
445_I	453_H	0.515	1.00
328_R	332_V	0.514	1.00
46_P	50_I	0.513	1.00
399_D	406_R	0.513	1.00
436_I	445_I	0.512	1.00
40_T	44_A	0.512	1.00
43_Q	210_I	0.508	1.00
154_E	303_S	0.507	1.00
435_R	443_P	0.505	1.00
332_V	335_K	0.505	1.00
34_F	161_K	0.504	1.00
147_V	151_A	0.504	1.00
40_T	211_A	0.503	1.00
70_L	73_A	0.503	1.00
33_L	36_S	0.502	1.00
31_T	217_F	0.502	1.00
135_F	302_L	0.501	1.00
309_L	342_L	0.501	1.00
223_E	379_W	0.501	1.00
120_Q	128_V	0.501	1.00
314_R	332_V	0.500	1.00
189_P	195_T	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.88	100	0.299	Contact Map
3giaA	1	0.8947	100	0.366	Contact Map
4djkA	2	0.8653	100	0.368	Contact Map
3dh4A	3	0.9179	99	0.856	Contact Map
2xq2A	2	0.9221	98.9	0.859	Contact Map
2jlnA	1	0.8842	98.8	0.864	Contact Map
4xp4A	1	0.9179	97.9	0.895	Contact Map
4wgvA	2	0.7663	97.6	0.903	Contact Map
2a65A	2	0.9116	97	0.912	Contact Map
4us3A	1	0.8442	96.3	0.919	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0131 seconds.