PBUX - BACSU - GREMLIN Contacts

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PBUX - Xanthine permease

UniProt:	P42086	Sequences: MRNGFGKTLSLGIQHVLAMYAGAIVVPLIVGKAMGLTVEQLTYLVSIDIFMCGVATLLQVWSNRFFGIGLPVVLGCTFTAVSPMIAIGSEYGVSTVYGSIIASGILVILISFFFGKLVSFFPPVVTGSVVTIIGITLMPVAMNNMAGGEGSADFGDLSNLALAFTVLSIIVLLYRFTKGFIKSVSILIGILIGTFIAYFMGKVQFDNVSDAAVVQMIQPFYFGAPSFHAAPIITMSIVAIVSLVESTGVYFALGDLTNRRLTEIDLSKGYRAEGLAVLLGGIFNAFPYTAFSQNVGLVQLTGIKKNAVIVVTGVILMAFGLFPKIAAFTTIIPSAVLGGAMVAMFGMVIAYGIKMLSRIDFAKQENLLIVACSVGLGLGVTVVPDIFKQLPSALTLLTTNGIVAGSFTAVVLNIVYNVFSKAKKIEQEADLAEQKTAV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	438 (393)
Sequences:	4337 (2263)
Seq/√Len:	114.2

ECOLI - UACT XANQ XANP YBBY URAA RUTG
BACSU - PBUX PUCJ PUCK YWDJ PYRP

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
169_I	192_I	5.123	1.00
165_T	196_I	5.006	1.00
101_I	281_G	4.936	1.00
145_M	163_A	4.081	1.00
132_I	405_G	4.007	1.00
213_V	324_K	3.743	1.00
170_I	189_G	3.737	1.00
50_F	320_G	3.608	1.00
195_F	199_F	3.582	1.00
106_L	236_S	3.467	1.00
206_D	210_D	3.241	1.00
94_S	226_S	3.175	1.00
173_L	188_I	3.133	1.00
162_L	197_A	3.072	1.00
376_L	408_T	3.019	1.00
95_T	226_S	2.946	1.00
220_F	282_I	2.811	1.00
98_G	227_F	2.759	1.00
205_F	208_V	2.752	1.00
162_L	202_K	2.662	1.00
53_G	317_M	2.634	1.00
165_T	192_I	2.624	1.00
373_S	409_A	2.617	1.00
365_E	417_N	2.445	1.00
211_A	324_K	2.409	1.00
101_I	278_L	2.393	1.00
16_V	315_I	2.382	1.00
167_L	343_A	2.336	1.00
12_G	311_V	2.329	1.00
92_G	95_T	2.328	1.00
250_Y	269_G	2.311	1.00
55_A	276_A	2.294	1.00
102_A	232_I	2.278	1.00
162_L	200_M	2.267	1.00
9_L	315_I	2.159	1.00
69_G	263_E	2.134	1.00
191_L	195_F	2.134	1.00
165_T	169_I	2.130	1.00
8_T	311_V	2.122	1.00
51_M	283_F	2.118	1.00
195_F	198_Y	2.086	1.00
105_I	109_L	2.074	1.00
161_A	165_T	2.058	1.00
108_I	271_R	2.046	1.00
57_L	310_V	2.008	1.00
209_S	212_A	2.005	1.00
57_L	313_G	1.995	1.00
208_V	328_F	1.995	1.00
411_V	415_V	1.992	1.00
169_I	173_L	1.986	1.00
120_F	414_I	1.979	1.00
303_I	308_V	1.973	1.00
108_I	278_L	1.968	1.00
169_I	196_I	1.965	1.00
111_S	271_R	1.940	1.00
158_S	202_K	1.917	1.00
60_V	310_V	1.915	1.00
157_L	161_A	1.890	1.00
30_V	84_M	1.851	1.00
84_M	96_V	1.830	1.00
104_G	278_L	1.826	1.00
110_I	243_L	1.826	1.00
105_I	278_L	1.822	1.00
254_G	261_L	1.803	1.00
194_T	331_I	1.792	1.00
207_N	331_I	1.782	1.00
170_I	340_A	1.770	1.00
206_D	209_S	1.738	1.00
196_I	200_M	1.724	1.00
173_L	177_T	1.719	1.00
50_F	317_M	1.711	1.00
100_I	281_G	1.703	1.00
257_T	260_R	1.702	1.00
135_I	349_I	1.696	1.00
122_P	413_N	1.665	1.00
208_V	211_A	1.665	1.00
199_F	202_K	1.658	1.00
211_A	327_A	1.647	1.00
172_L	176_F	1.632	1.00
144_N	334_S	1.628	1.00
194_T	203_V	1.624	1.00
262_T	265_D	1.596	1.00
180_F	184_V	1.576	1.00
167_L	372_C	1.575	1.00
314_V	318_A	1.563	1.00
265_D	268_K	1.546	1.00
108_I	274_G	1.542	1.00
52_C	73_V	1.530	1.00
373_S	408_T	1.522	1.00
161_A	164_F	1.517	1.00
16_V	312_T	1.517	1.00
228_H	231_P	1.481	1.00
164_F	168_S	1.471	1.00
369_I	412_L	1.459	1.00
62_S	69_G	1.431	1.00
95_T	228_H	1.427	1.00
108_I	275_L	1.425	1.00
177_T	181_I	1.425	1.00
158_S	200_M	1.413	1.00
181_I	188_I	1.411	1.00
124_V	370_V	1.411	1.00
193_G	336_V	1.402	1.00
34_M	88_G	1.397	1.00
259_R	265_D	1.393	1.00
207_N	210_D	1.391	1.00
219_P	284_N	1.389	1.00
395_T	399_T	1.389	1.00
198_Y	205_F	1.380	1.00
57_L	60_V	1.372	1.00
407_F	411_V	1.371	1.00
85_I	88_G	1.361	1.00
219_P	282_I	1.356	1.00
376_L	404_A	1.350	1.00
15_H	294_N	1.346	1.00
146_A	154_F	1.335	1.00
104_G	277_V	1.329	1.00
196_I	199_F	1.328	1.00
101_I	225_P	1.309	1.00
6_G	10_S	1.302	1.00
87_I	231_P	1.293	0.99
56_T	73_V	1.290	0.99
255_D	358_R	1.288	0.99
192_I	196_I	1.283	0.99
81_V	85_I	1.275	0.99
298_V	304_K	1.262	0.99
61_W	310_V	1.262	0.99
19_M	23_A	1.253	0.99
54_V	317_M	1.248	0.99
221_Y	284_N	1.248	0.99
361_F	370_V	1.218	0.99
184_V	188_I	1.216	0.99
177_T	182_K	1.214	0.99
91_Y	228_H	1.208	0.99
253_L	298_V	1.203	0.99
109_L	113_F	1.200	0.99
50_F	283_F	1.189	0.99
324_K	327_A	1.188	0.99
359_I	366_N	1.188	0.99
57_L	317_M	1.186	0.99
168_S	172_L	1.183	0.99
72_V	253_L	1.180	0.99
153_D	156_D	1.177	0.99
372_C	408_T	1.172	0.99
227_F	232_I	1.172	0.99
249_V	292_S	1.169	0.99
60_V	309_I	1.165	0.99
64_R	268_K	1.161	0.99
104_G	274_G	1.154	0.99
75_G	291_F	1.129	0.99
132_I	377_G	1.128	0.99
215_Q	323_P	1.125	0.99
124_V	128_S	1.113	0.98
77_T	242_S	1.103	0.98
101_I	282_I	1.100	0.98
79_T	242_S	1.099	0.98
107_V	242_S	1.087	0.98
245_E	289_T	1.086	0.98
188_I	192_I	1.080	0.98
87_I	235_M	1.080	0.98
142_M	379_G	1.080	0.98
374_V	378_L	1.077	0.98
161_A	200_M	1.068	0.98
229_A	232_I	1.060	0.98
318_A	322_F	1.039	0.98
368_L	372_C	1.035	0.98
394_L	398_T	1.032	0.97
246_S	250_Y	1.027	0.97
74_L	290_A	1.027	0.97
394_L	397_L	1.024	0.97
18_A	297_L	1.020	0.97
250_Y	273_E	1.016	0.97
131_T	374_V	1.014	0.97
249_V	295_V	1.013	0.97
204_Q	207_N	1.011	0.97
103_S	239_A	1.003	0.97
322_F	326_A	1.002	0.97
62_S	275_L	1.001	0.97
83_P	238_V	0.991	0.97
280_G	288_Y	0.987	0.97
13_I	315_I	0.986	0.97
165_T	200_M	0.985	0.97
64_R	69_G	0.980	0.97
3_N	305_K	0.971	0.96
88_G	96_V	0.970	0.96
111_S	267_S	0.962	0.96
54_V	58_L	0.955	0.96
94_S	223_G	0.953	0.96
158_S	161_A	0.948	0.96
151_S	156_D	0.948	0.96
220_F	223_G	0.946	0.96
150_G	154_F	0.946	0.96
384_P	398_T	0.943	0.96
98_G	102_A	0.941	0.96
26_V	78_F	0.941	0.96
73_V	312_T	0.939	0.96
5_F	9_L	0.937	0.96
3_N	308_V	0.930	0.95
307_A	310_V	0.930	0.95
72_V	290_A	0.929	0.95
143_N	154_F	0.927	0.95
198_Y	203_V	0.920	0.95
54_V	279_L	0.920	0.95
220_F	225_P	0.917	0.95
197_A	201_G	0.917	0.95
91_Y	95_T	0.915	0.95
246_S	269_G	0.915	0.95
59_Q	70_L	0.914	0.95
279_L	283_F	0.912	0.95
9_L	13_I	0.911	0.95
156_D	159_N	0.902	0.94
57_L	314_V	0.900	0.94
158_S	162_L	0.899	0.94
172_L	415_V	0.899	0.94
212_A	215_Q	0.887	0.94
138_M	375_G	0.883	0.94
187_L	191_L	0.881	0.94
3_N	8_T	0.877	0.94
178_K	182_K	0.873	0.93
86_A	89_S	0.872	0.93
101_I	227_F	0.871	0.93
150_G	153_D	0.868	0.93
131_T	353_I	0.862	0.93
15_H	18_A	0.861	0.93
99_S	103_S	0.859	0.93
362_A	366_N	0.857	0.93
121_F	406_S	0.856	0.93
325_I	328_F	0.855	0.93
350_A	367_L	0.852	0.93
218_Q	221_Y	0.850	0.93
275_L	279_L	0.849	0.93
349_I	374_V	0.848	0.92
15_H	19_M	0.847	0.92
197_A	202_K	0.841	0.92
51_M	279_L	0.841	0.92
99_S	231_P	0.840	0.92
77_T	289_T	0.839	0.92
53_G	313_G	0.838	0.92
173_L	181_I	0.837	0.92
114_F	270_Y	0.833	0.92
257_T	304_K	0.831	0.92
194_T	205_F	0.829	0.92
230_A	234_T	0.829	0.92
216_M	321_L	0.824	0.91
173_L	189_G	0.822	0.91
130_V	249_V	0.821	0.91
310_V	313_G	0.821	0.91
213_V	322_F	0.816	0.91
98_G	225_P	0.815	0.91
162_L	196_I	0.813	0.91
194_T	332_I	0.810	0.91
9_L	311_V	0.808	0.91
72_V	250_Y	0.808	0.91
197_A	200_M	0.807	0.90
95_T	231_P	0.807	0.90
208_V	327_A	0.804	0.90
141_A	166_V	0.803	0.90
319_F	325_I	0.802	0.90
343_A	368_L	0.801	0.90
107_V	274_G	0.800	0.90
73_V	309_I	0.796	0.90
246_S	273_E	0.795	0.90
159_N	335_A	0.795	0.90
28_L	31_G	0.794	0.90
111_S	274_G	0.794	0.90
51_M	285_A	0.793	0.90
28_L	337_L	0.789	0.89
60_V	306_N	0.787	0.89
136_T	402_I	0.787	0.89
51_M	280_G	0.785	0.89
144_N	345_F	0.783	0.89
22_G	345_F	0.780	0.89
365_E	369_I	0.776	0.89
168_S	171_V	0.776	0.89
22_G	293_Q	0.774	0.89
154_F	383_V	0.773	0.89
11_L	15_H	0.773	0.89
79_T	344_M	0.772	0.88
154_F	157_L	0.772	0.88
208_V	324_K	0.772	0.88
115_G	267_S	0.769	0.88
240_I	244_V	0.768	0.88
58_L	62_S	0.766	0.88
295_V	298_V	0.761	0.88
151_S	154_F	0.760	0.88
195_F	318_A	0.760	0.88
112_F	271_R	0.759	0.88
174_Y	300_L	0.754	0.87
72_V	297_L	0.754	0.87
242_S	289_T	0.752	0.87
26_V	76_C	0.752	0.87
146_A	155_G	0.752	0.87
151_S	159_N	0.751	0.87
86_A	90_E	0.745	0.87
23_A	52_C	0.743	0.86
369_I	373_S	0.742	0.86
21_A	27_P	0.742	0.86
88_G	91_Y	0.742	0.86
81_V	240_I	0.741	0.86
87_I	99_S	0.740	0.86
213_V	217_I	0.739	0.86
141_A	163_A	0.739	0.86
315_I	319_F	0.739	0.86
246_S	289_T	0.736	0.86
301_T	315_I	0.734	0.86
105_I	108_I	0.733	0.86
107_V	239_A	0.729	0.85
82_S	85_I	0.729	0.85
247_T	266_L	0.726	0.85
167_L	171_V	0.725	0.85
151_S	155_G	0.725	0.85
169_I	189_G	0.724	0.85
128_S	373_S	0.723	0.85
229_A	233_I	0.723	0.85
371_A	375_G	0.721	0.85
205_F	331_I	0.719	0.85
208_V	331_I	0.719	0.85
143_N	146_A	0.715	0.84
48_D	286_F	0.713	0.84
206_D	211_A	0.713	0.84
4_G	7_K	0.711	0.84
102_A	227_F	0.709	0.84
277_V	288_Y	0.708	0.84
9_L	209_S	0.708	0.84
16_V	319_F	0.708	0.84
146_A	160_L	0.707	0.84
144_N	337_L	0.707	0.84
76_C	80_A	0.706	0.84
19_M	294_N	0.704	0.83
58_L	272_A	0.703	0.83
380_V	404_A	0.702	0.83
350_A	370_V	0.702	0.83
174_Y	368_L	0.701	0.83
50_F	321_L	0.701	0.83
101_I	105_I	0.701	0.83
91_Y	231_P	0.699	0.83
190_I	340_A	0.697	0.83
310_V	314_V	0.696	0.83
71_P	309_I	0.694	0.83
120_F	410_V	0.694	0.83
47_I	51_M	0.694	0.83
46_S	326_A	0.693	0.82
95_T	99_S	0.693	0.82
77_T	80_A	0.690	0.82
48_D	76_C	0.688	0.82
314_V	358_R	0.688	0.82
183_S	417_N	0.686	0.82
93_V	97_Y	0.686	0.82
130_V	133_I	0.684	0.82
25_V	144_N	0.683	0.82
74_L	246_S	0.680	0.81
94_S	97_Y	0.679	0.81
12_G	312_T	0.678	0.81
186_I	297_L	0.677	0.81
240_I	252_A	0.675	0.81
377_G	405_G	0.673	0.81
253_L	290_A	0.673	0.81
23_A	48_D	0.672	0.80
131_T	356_L	0.671	0.80
376_L	380_V	0.671	0.80
191_L	328_F	0.670	0.80
116_K	120_F	0.670	0.80
48_D	52_C	0.669	0.80
346_G	350_A	0.665	0.80
121_F	179_G	0.665	0.80
107_V	243_L	0.665	0.80
47_I	50_F	0.663	0.80
172_L	177_T	0.662	0.79
369_I	417_N	0.662	0.79
88_G	93_V	0.661	0.79
115_G	119_S	0.659	0.79
23_A	26_V	0.658	0.79
361_F	366_N	0.656	0.79
181_I	185_S	0.653	0.79
211_A	323_P	0.652	0.78
377_G	401_G	0.651	0.78
15_H	297_L	0.648	0.78
173_L	192_I	0.648	0.78
82_S	86_A	0.647	0.78
164_F	200_M	0.646	0.78
160_L	164_F	0.644	0.78
169_I	188_I	0.642	0.77
235_M	335_A	0.641	0.77
84_M	100_I	0.640	0.77
189_G	192_I	0.639	0.77
175_R	350_A	0.638	0.77
372_C	412_L	0.638	0.77
214_V	322_F	0.637	0.77
70_L	269_G	0.637	0.77
19_M	73_V	0.636	0.77
327_A	330_T	0.636	0.77
101_I	224_A	0.636	0.77
278_L	282_I	0.636	0.77
224_A	282_I	0.635	0.77
92_G	226_S	0.635	0.77
25_V	28_L	0.634	0.77
33_A	221_Y	0.633	0.76
245_E	273_E	0.632	0.76
256_L	299_Q	0.632	0.76
361_F	367_L	0.631	0.76
236_S	239_A	0.630	0.76
155_G	159_N	0.630	0.76
253_L	295_V	0.629	0.76
242_S	245_E	0.629	0.76
161_A	196_I	0.628	0.76
170_I	343_A	0.625	0.76
124_V	366_N	0.625	0.76
145_M	342_V	0.624	0.75
327_A	331_I	0.624	0.75
52_C	72_V	0.623	0.75
126_T	323_P	0.622	0.75
401_G	405_G	0.620	0.75
264_I	268_K	0.620	0.75
138_M	378_L	0.620	0.75
162_L	335_A	0.615	0.74
292_S	351_Y	0.614	0.74
200_M	325_I	0.613	0.74
299_Q	354_K	0.611	0.74
175_R	348_V	0.608	0.74
188_I	191_L	0.607	0.73
129_V	167_L	0.605	0.73
169_I	172_L	0.605	0.73
99_S	232_I	0.605	0.73
173_L	176_F	0.605	0.73
190_I	337_L	0.603	0.73
97_Y	101_I	0.602	0.73
165_T	203_V	0.599	0.72
144_N	341_M	0.599	0.72
71_P	99_S	0.599	0.72
25_V	29_I	0.598	0.72
277_V	280_G	0.598	0.72
146_A	150_G	0.598	0.72
375_G	378_L	0.597	0.72
192_I	195_F	0.596	0.72
19_M	354_K	0.596	0.72
12_G	130_V	0.596	0.72
98_G	226_S	0.595	0.72
122_P	296_G	0.595	0.72
116_K	263_E	0.595	0.72
173_L	185_S	0.593	0.72
190_I	244_V	0.591	0.71
249_V	290_A	0.591	0.71
405_G	409_A	0.586	0.71
216_M	320_G	0.586	0.71
346_G	367_L	0.585	0.71
195_F	209_S	0.585	0.71
234_T	397_L	0.585	0.71
116_K	121_F	0.584	0.71
128_S	409_A	0.584	0.71
136_T	400_N	0.583	0.70
249_V	351_Y	0.578	0.70
143_N	151_S	0.577	0.70
71_P	257_T	0.573	0.69
201_G	336_V	0.573	0.69
84_M	235_M	0.571	0.69
87_I	96_V	0.571	0.69
252_A	351_Y	0.570	0.69
239_A	277_V	0.569	0.69
269_G	273_E	0.568	0.68
3_N	417_N	0.568	0.68
131_T	170_I	0.568	0.68
292_S	403_V	0.568	0.68
53_G	57_L	0.567	0.68
250_Y	261_L	0.566	0.68
51_M	276_A	0.565	0.68
131_T	349_I	0.564	0.68
216_M	219_P	0.564	0.68
170_I	174_Y	0.562	0.68
248_G	377_G	0.561	0.67
294_N	297_L	0.560	0.67
261_L	265_D	0.560	0.67
138_M	371_A	0.559	0.67
87_I	98_G	0.559	0.67
170_I	173_L	0.559	0.67
293_Q	345_F	0.558	0.67
57_L	61_W	0.558	0.67
87_I	234_T	0.558	0.67
193_G	201_G	0.557	0.67
30_V	190_I	0.557	0.67
5_F	314_V	0.556	0.67
127_G	352_G	0.556	0.67
258_N	304_K	0.556	0.67
54_V	283_F	0.556	0.67
354_K	361_F	0.555	0.67
351_Y	354_K	0.554	0.67
23_A	316_L	0.554	0.67
59_Q	306_N	0.554	0.67
83_P	86_A	0.553	0.66
23_A	76_C	0.552	0.66
58_L	108_I	0.551	0.66
136_T	401_G	0.551	0.66
192_I	199_F	0.550	0.66
199_F	203_V	0.549	0.66
160_L	381_T	0.548	0.66
370_V	374_V	0.548	0.66
99_S	236_S	0.548	0.66
242_S	250_Y	0.547	0.66
83_P	401_G	0.547	0.66
410_V	414_I	0.547	0.66
13_I	146_A	0.547	0.66
79_T	289_T	0.546	0.65
273_E	289_T	0.546	0.65
159_N	162_L	0.546	0.65
95_T	98_G	0.545	0.65
79_T	133_I	0.544	0.65
80_A	277_V	0.543	0.65
16_V	234_T	0.543	0.65
320_G	326_A	0.543	0.65
74_L	277_V	0.543	0.65
217_I	343_A	0.543	0.65
56_T	313_G	0.540	0.65
140_V	144_N	0.540	0.65
354_K	358_R	0.540	0.65
356_L	367_L	0.540	0.65
50_F	302_G	0.539	0.64
11_L	121_F	0.539	0.64
55_A	272_A	0.538	0.64
216_M	240_I	0.537	0.64
247_T	251_F	0.537	0.64
306_N	310_V	0.536	0.64
359_I	367_L	0.536	0.64
354_K	362_A	0.536	0.64
372_C	378_L	0.536	0.64
222_F	225_P	0.535	0.64
189_G	340_A	0.535	0.64
159_N	163_A	0.534	0.64
337_L	340_A	0.532	0.63
76_C	289_T	0.531	0.63
177_T	180_F	0.530	0.63
360_D	366_N	0.530	0.63
57_L	305_K	0.530	0.63
85_I	216_M	0.529	0.63
170_I	353_I	0.528	0.63
358_R	362_A	0.528	0.63
143_N	191_L	0.528	0.63
356_L	359_I	0.526	0.63
214_V	218_Q	0.526	0.63
27_P	31_G	0.523	0.62
99_S	107_V	0.523	0.62
198_Y	415_V	0.522	0.62
303_I	337_L	0.522	0.62
168_S	191_L	0.522	0.62
369_I	414_I	0.519	0.62
205_F	328_F	0.519	0.62
273_E	371_A	0.518	0.61
77_T	280_G	0.518	0.61
125_V	413_N	0.518	0.61
191_L	415_V	0.516	0.61
144_N	163_A	0.516	0.61
207_N	283_F	0.515	0.61
11_L	292_S	0.515	0.61
299_Q	405_G	0.515	0.61
381_T	384_P	0.514	0.61
49_I	83_P	0.514	0.61
393_A	396_L	0.513	0.61
307_A	311_V	0.512	0.60
406_S	409_A	0.512	0.60
119_S	414_I	0.512	0.60
88_G	323_P	0.512	0.60
106_L	110_I	0.511	0.60
243_L	288_Y	0.511	0.60
138_M	342_V	0.511	0.60
17_L	369_I	0.511	0.60
318_A	397_L	0.510	0.60
246_S	290_A	0.510	0.60
60_V	313_G	0.510	0.60
50_F	399_T	0.510	0.60
74_L	250_Y	0.509	0.60
416_Y	419_F	0.509	0.60
350_A	371_A	0.509	0.60
179_G	182_K	0.509	0.60
194_T	198_Y	0.508	0.60
397_L	407_F	0.508	0.60
155_G	378_L	0.508	0.60
150_G	155_G	0.507	0.60
311_V	315_I	0.507	0.60
69_G	85_I	0.506	0.60
216_M	419_F	0.506	0.60
179_G	189_G	0.506	0.60
133_I	291_F	0.505	0.59
55_A	72_V	0.505	0.59
124_V	369_I	0.505	0.59
376_L	381_T	0.504	0.59
195_F	214_V	0.504	0.59
293_Q	347_M	0.503	0.59
253_L	329_T	0.502	0.59
292_S	295_V	0.502	0.59
53_G	301_T	0.501	0.59
198_Y	201_G	0.501	0.59
110_I	113_F	0.500	0.59
162_L	190_I	0.500	0.59

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qe7A	2	0.895	100	0.403	Contact Map
2cfqA	1	0.895	96.3	0.941	Contact Map
1pw4A	1	0.8881	95.3	0.946	Contact Map
3wdoA	1	0.8904	95	0.946	Contact Map
4pypA	1	0.8973	93	0.951	Contact Map
4ikvA	1	0.9018	92.5	0.952	Contact Map
4j05A	3	0.8607	91.7	0.953	Contact Map
4tphA	2	0.8676	87.5	0.957	Contact Map
4m64A	1	0.8813	85.7	0.958	Contact Map
4ldsA	2	0.879	85.1	0.958	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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