DHBE - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

DHBE - 2,3-dihydroxybenzoate-AMP ligase

UniProt:	P40871	Sequences: MLKGFTPWPDELAETYRKNGCWAGETFGDLLRDRAAKYGDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQMDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLEDLHAEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDEMRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISEKLLAGFKK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	539 (487)
Sequences:	71556 (51803)
Seq/√Len:	2347.4

ECOLI - FADK LCFA ENTF AAS ACSA ENTE PRPE CAIC MENE PAAK
BACSU - DHBE SRFAC PPSE YNGI LCFA ACSA LCFB YDAB PPSB YTCI PPSC MENE YHFT DLTA DHBF PKSJ SRFAA PPSD SRFAB PKSN PPSA
HALSA - Q9HRY8 Q9HSM3 Q9HQU8 Q9HNK0 Q9HQ43 Q9HQN8
SULSO - Q97UX8 Q97U22 Q97VT6 Q97WQ0 Q97UW7 Q97VU7 Q97YK9 Q97WQ9 Q97WK0 Q97UF6 Q97XW4 Q97V27 Q97WS5 Q980E4 Q97X52 Q97XW5 Q97VJ6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
184_V	201_P	3.862	1.00
452_H	491_F	3.185	1.00
381_L	415_V	3.115	1.00
362_E	384_R	2.925	1.00
61_D	97_R	2.910	1.00
395_A	398_H	2.871	1.00
120_F	189_L	2.839	1.00
79_V	123_A	2.784	1.00
203_T	390_R	2.777	1.00
76_D	124_A	2.727	1.00
416_R	424_V	2.718	1.00
57_D	97_R	2.713	1.00
72_I	100_A	2.682	1.00
45_T	252_R	2.612	1.00
380_H	410_R	2.504	1.00
434_N	439_K	2.432	1.00
225_V	252_R	2.416	1.00
42_I	50_H	2.383	1.00
122_E	394_K	2.342	1.00
457_D	514_Q	2.333	1.00
38_Y	41_R	2.300	1.00
32_R	57_D	2.298	1.00
77_R	103_V	2.294	1.00
450_L	458_A	2.285	1.00
66_G	70_L	2.283	1.00
364_R	372_D	2.249	1.00
366_W	382_L	2.247	1.00
449_L	474_V	2.202	1.00
59_R	90_E	2.177	1.00
378_T	414_I	2.167	1.00
116_Y	196_L	2.141	1.00
34_R	38_Y	2.134	1.00
367_D	371_R	2.128	1.00
418_T	424_V	2.117	1.00
120_F	395_A	2.112	1.00
91_V	127_I	2.109	1.00
382_L	410_R	2.096	1.00
57_D	61_D	2.078	1.00
46_C	86_K	2.069	1.00
521_S	524_A	2.066	1.00
451_A	495_R	2.057	1.00
431_D	522_K	2.047	1.00
266_P	270_R	2.037	1.00
473_C	507_E	2.020	1.00
95_L	100_A	2.001	1.00
224_T	301_Q	1.962	1.00
180_K	183_D	1.948	1.00
398_H	401_A	1.942	1.00
416_R	426_E	1.917	1.00
352_T	424_V	1.901	1.00
224_T	274_T	1.888	1.00
63_L	90_E	1.886	1.00
418_T	422_Y	1.881	1.00
45_T	50_H	1.875	1.00
115_T	119_E	1.865	1.00
396_E	400_A	1.850	1.00
364_R	382_L	1.846	1.00
312_A	316_R	1.846	1.00
40_D	54_R	1.820	1.00
74_Q	183_D	1.811	1.00
73_Q	76_D	1.785	1.00
444_E	501_K	1.779	1.00
124_A	152_K	1.767	1.00
68_Q	98_L	1.750	1.00
45_T	271_E	1.742	1.00
75_M	183_D	1.736	1.00
524_A	527_E	1.732	1.00
60_A	97_R	1.725	1.00
417_L	423_I	1.725	1.00
272_K	299_S	1.717	1.00
435_R	440_V	1.696	1.00
456_H	479_R	1.680	1.00
54_R	58_T	1.678	1.00
33_D	37_K	1.678	1.00
378_T	426_E	1.675	1.00
450_L	457_D	1.667	1.00
446_E	460_M	1.664	1.00
254_V	273_V	1.662	1.00
461_V	475_F	1.648	1.00
83_P	129_P	1.631	1.00
203_T	206_D	1.630	1.00
52_S	55_E	1.612	1.00
89_F	243_V	1.600	1.00
375_P	417_L	1.593	1.00
184_V	390_R	1.582	1.00
79_V	105_A	1.571	1.00
96_F	185_A	1.556	1.00
475_F	525_L	1.552	1.00
115_T	147_K	1.545	1.00
34_R	37_K	1.526	1.00
477_I	512_F	1.524	1.00
77_R	101_L	1.523	1.00
32_R	97_R	1.518	1.00
448_H	495_R	1.517	1.00
263_D	266_P	1.514	1.00
215_V	249_A	1.512	1.00
278_L	283_A	1.507	1.00
365_V	415_V	1.506	1.00
460_M	474_V	1.506	1.00
339_Y	383_T	1.506	1.00
454_A	487_E	1.504	1.00
397_E	401_A	1.501	1.00
51_W	90_E	1.498	1.00
476_I	508_F	1.498	1.00
39_G	54_R	1.494	1.00
70_L	153_N	1.486	1.00
189_L	199_L	1.476	1.00
491_F	495_R	1.473	1.00
61_D	65_A	1.457	1.00
35_A	57_D	1.457	1.00
42_I	45_T	1.454	1.00
464_P	470_E	1.452	1.00
246_V	251_G	1.449	1.00
78_V	95_L	1.442	1.00
216_E	359_P	1.442	1.00
42_I	252_R	1.439	1.00
41_R	223_S	1.436	1.00
182_S	205_D	1.435	1.00
121_A	189_L	1.427	1.00
187_L	393_Y	1.425	1.00
316_R	320_A	1.421	1.00
415_V	425_V	1.419	1.00
349_I	420_D	1.417	1.00
478_P	508_F	1.417	1.00
374_K	377_E	1.414	1.00
269_E	295_D	1.414	1.00
281_P	308_A	1.411	1.00
515_T	521_S	1.396	1.00
332_M	409_Y	1.395	1.00
201_P	393_Y	1.386	1.00
325_T	343_D	1.386	1.00
227_L	273_V	1.382	1.00
51_W	86_K	1.376	1.00
489_K	506_V	1.374	1.00
260_S	263_D	1.373	1.00
454_A	482_A	1.373	1.00
206_D	336_L	1.373	1.00
389_I	403_F	1.371	1.00
118_C	123_A	1.371	1.00
201_P	391_G	1.366	1.00
476_I	506_V	1.363	1.00
224_T	275_I	1.359	1.00
340_T	363_M	1.353	1.00
79_V	118_C	1.352	1.00
414_I	429_A	1.347	1.00
378_T	416_R	1.343	1.00
225_V	254_V	1.343	1.00
43_A	56_L	1.340	1.00
103_V	121_A	1.334	1.00
46_C	49_T	1.333	1.00
78_V	100_A	1.329	1.00
181_S	205_D	1.325	1.00
283_A	303_L	1.325	1.00
267_L	271_E	1.321	1.00
363_M	383_T	1.311	1.00
355_K	422_Y	1.310	1.00
384_R	408_F	1.307	1.00
367_D	373_V	1.300	1.00
221_D	224_T	1.296	1.00
490_A	494_E	1.291	1.00
120_F	394_K	1.291	1.00
349_I	422_Y	1.287	1.00
256_S	267_L	1.286	1.00
75_M	390_R	1.284	1.00
457_D	477_I	1.281	1.00
77_R	187_L	1.279	1.00
465_D	471_R	1.279	1.00
305_V	310_F	1.271	1.00
205_D	386_P	1.269	1.00
402_S	409_Y	1.268	1.00
433_I	442_A	1.264	1.00
475_F	509_V	1.260	1.00
111_S	143_Q	1.254	1.00
93_F	247_L	1.253	1.00
63_L	94_A	1.246	1.00
489_K	493_R	1.245	1.00
66_G	169_L	1.245	1.00
473_C	505_R	1.236	1.00
116_Y	120_F	1.232	1.00
463_M	473_C	1.228	1.00
111_S	115_T	1.228	1.00
72_I	76_D	1.223	1.00
120_F	196_L	1.223	1.00
225_V	273_V	1.215	1.00
356_P	363_M	1.215	1.00
276_T	300_L	1.214	1.00
101_L	184_V	1.209	1.00
77_R	393_Y	1.208	1.00
59_R	62_R	1.207	1.00
201_P	390_R	1.203	1.00
72_I	78_V	1.194	1.00
380_H	429_A	1.193	1.00
26_T	29_D	1.192	1.00
491_F	494_E	1.190	1.00
484_K	487_E	1.187	1.00
342_L	422_Y	1.185	1.00
80_V	91_V	1.184	1.00
130_D	158_G	1.183	1.00
443_E	447_N	1.177	1.00
438_E	500_Y	1.174	1.00
187_L	199_L	1.173	1.00
493_R	499_A	1.172	1.00
462_S	470_E	1.171	1.00
404_T	410_R	1.162	1.00
431_D	443_E	1.158	1.00
275_I	302_V	1.157	1.00
58_T	62_R	1.156	1.00
57_D	174_V	1.153	1.00
471_R	504_D	1.145	1.00
381_L	425_V	1.143	1.00
50_H	271_E	1.140	1.00
66_G	69_K	1.133	1.00
56_L	93_F	1.132	1.00
43_A	53_Y	1.131	1.00
493_R	502_I	1.131	1.00
368_D	429_A	1.128	1.00
179_V	183_D	1.121	1.00
49_T	86_K	1.118	1.00
268_I	299_S	1.117	1.00
475_F	526_R	1.117	1.00
94_A	98_L	1.116	1.00
284_M	314_A	1.109	1.00
373_V	377_E	1.109	1.00
32_R	61_D	1.108	1.00
111_S	140_L	1.107	1.00
81_Q	114_I	1.106	1.00
51_W	59_R	1.105	1.00
190_S	200_I	1.104	1.00
125_A	153_N	1.103	1.00
262_D	289_A	1.102	1.00
288_D	317_R	1.096	1.00
119_E	196_L	1.094	1.00
474_V	506_V	1.090	1.00
59_R	87_E	1.087	1.00
398_H	402_S	1.086	1.00
471_R	505_R	1.077	1.00
202_R	206_D	1.077	1.00
55_E	58_T	1.075	1.00
45_T	254_V	1.074	1.00
82_L	157_A	1.072	1.00
182_S	203_T	1.069	1.00
318_V	322_F	1.066	1.00
436_G	468_L	1.056	1.00
88_F	232_M	1.056	1.00
364_R	408_F	1.055	1.00
361_D	387_Y	1.049	1.00
105_A	114_I	1.047	1.00
72_I	125_A	1.044	1.00
56_L	90_E	1.043	1.00
165_P	168_D	1.041	1.00
254_V	271_E	1.041	1.00
64_A	97_R	1.041	1.00
63_L	127_I	1.041	1.00
452_H	488_L	1.040	1.00
311_S	314_A	1.040	1.00
382_L	404_T	1.033	1.00
432_Q	441_A	1.032	1.00
206_D	388_T	1.032	1.00
456_H	477_I	1.026	1.00
509_V	512_F	1.024	1.00
463_M	505_R	1.021	1.00
254_V	267_L	1.018	1.00
225_V	274_T	1.017	1.00
492_L	502_I	1.013	1.00
446_E	522_K	1.012	1.00
498_A	501_K	1.010	1.00
509_V	528_A	1.009	1.00
113_E	501_K	1.009	1.00
224_T	251_G	1.004	1.00
487_E	490_A	1.002	1.00
448_H	451_A	1.001	1.00
383_T	411_T	0.996	1.00
342_L	352_T	0.996	1.00
112_S	495_R	0.994	1.00
76_D	100_A	0.994	1.00
226_Y	246_V	0.990	1.00
512_F	520_V	0.988	1.00
524_A	528_A	0.986	1.00
340_T	423_I	0.985	1.00
287_M	317_R	0.982	1.00
353_Q	425_V	0.981	1.00
200_I	389_I	0.977	1.00
285_V	467_F	0.976	1.00
51_W	56_L	0.972	1.00
60_A	94_A	0.972	1.00
47_G	257_P	0.972	1.00
313_E	317_R	0.969	1.00
523_K	527_E	0.963	1.00
433_I	472_S	0.960	1.00
191_G	517_V	0.960	1.00
385_G	388_T	0.954	1.00
77_R	122_E	0.950	1.00
188_Q	333_A	0.948	1.00
44_I	89_F	0.944	1.00
448_H	492_L	0.941	1.00
41_R	252_R	0.939	1.00
485_A	508_F	0.939	1.00
112_S	115_T	0.936	1.00
129_P	132_Y	0.936	1.00
310_F	315_A	0.935	1.00
109_H	117_F	0.935	1.00
116_Y	189_L	0.935	1.00
459_A	512_F	0.935	1.00
69_K	170_H	0.932	1.00
363_M	423_I	0.930	1.00
63_L	91_V	0.929	1.00
116_Y	119_E	0.928	1.00
42_I	52_S	0.926	1.00
209_Y	360_Y	0.926	1.00
49_T	59_R	0.925	1.00
352_T	422_Y	0.923	1.00
365_V	373_V	0.923	1.00
317_R	321_V	0.921	1.00
490_A	493_R	0.918	1.00
31_L	35_A	0.915	1.00
48_N	270_R	0.910	1.00
452_H	487_E	0.908	1.00
67_F	95_L	0.907	1.00
92_I	102_P	0.905	1.00
284_M	311_S	0.905	1.00
227_L	256_S	0.904	1.00
82_L	85_I	0.902	1.00
486_A	490_A	0.901	1.00
86_K	90_E	0.901	1.00
112_S	116_Y	0.899	1.00
367_D	377_E	0.899	1.00
451_A	491_F	0.899	1.00
414_I	427_G	0.894	1.00
487_E	491_F	0.893	1.00
79_V	126_Y	0.890	1.00
363_M	381_L	0.885	1.00
317_R	320_A	0.883	1.00
65_A	68_Q	0.879	1.00
211_L	248_Y	0.879	1.00
246_V	253_V	0.877	1.00
68_Q	73_Q	0.877	1.00
70_L	125_A	0.874	1.00
56_L	60_A	0.874	1.00
277_A	338_N	0.873	1.00
209_Y	386_P	0.873	1.00
202_R	336_L	0.870	1.00
349_I	418_T	0.869	1.00
435_R	462_S	0.866	1.00
87_E	90_E	0.866	1.00
65_A	171_A	0.865	1.00
464_P	467_F	0.863	1.00
485_A	506_V	0.862	1.00
283_A	318_V	0.861	1.00
80_V	102_P	0.861	1.00
302_V	327_Q	0.861	1.00
365_V	423_I	0.859	1.00
33_D	36_A	0.853	1.00
83_P	131_A	0.852	1.00
95_L	102_P	0.851	1.00
45_T	225_V	0.848	1.00
67_F	127_I	0.846	1.00
55_E	59_R	0.846	1.00
72_I	98_L	0.842	1.00
89_F	255_L	0.835	1.00
68_Q	175_K	0.832	1.00
28_G	179_V	0.832	1.00
370_D	382_L	0.831	1.00
210_S	337_V	0.831	1.00
116_Y	395_A	0.830	1.00
44_I	86_K	0.830	1.00
57_D	60_A	0.828	1.00
269_E	296_D	0.825	1.00
64_A	98_L	0.824	1.00
139_S	142_R	0.822	1.00
202_R	389_I	0.820	1.00
478_P	482_A	0.820	1.00
30_L	212_K	0.817	1.00
364_R	406_D	0.817	1.00
59_R	86_K	0.817	1.00
304_Q	329_V	0.813	1.00
130_D	156_V	0.812	1.00
223_S	274_T	0.811	1.00
488_L	506_V	0.810	1.00
376_G	419_R	0.807	1.00
185_A	204_H	0.806	1.00
459_A	525_L	0.805	1.00
397_E	400_A	0.803	1.00
32_R	36_A	0.802	1.00
79_V	103_V	0.800	1.00
291_S	317_R	0.795	1.00
435_R	504_D	0.793	1.00
225_V	272_K	0.789	1.00
92_I	238_L	0.786	1.00
381_L	423_I	0.784	1.00
279_V	282_L	0.781	1.00
335_G	388_T	0.777	1.00
229_A	282_L	0.776	1.00
454_A	479_R	0.775	1.00
274_T	301_Q	0.775	1.00
42_I	46_C	0.774	1.00
283_A	305_V	0.774	1.00
335_G	409_Y	0.773	1.00
58_T	172_E	0.772	1.00
489_K	502_I	0.772	1.00
262_D	266_P	0.769	1.00
185_A	207_Y	0.769	1.00
41_R	222_H	0.768	1.00
399_N	403_F	0.768	1.00
90_E	94_A	0.764	1.00
382_L	408_F	0.763	1.00
62_R	66_G	0.762	1.00
65_A	175_K	0.761	1.00
302_V	325_T	0.761	1.00
366_W	372_D	0.759	1.00
31_L	93_F	0.759	1.00
431_D	446_E	0.758	1.00
363_M	415_V	0.758	1.00
30_L	34_R	0.756	1.00
231_P	235_N	0.755	1.00
368_D	380_H	0.754	1.00
29_D	33_D	0.752	1.00
56_L	89_F	0.752	1.00
49_T	87_E	0.751	1.00
477_I	511_S	0.751	1.00
128_I	156_V	0.750	1.00
220_L	224_T	0.747	1.00
92_I	96_F	0.747	1.00
130_D	159_E	0.747	1.00
403_F	410_R	0.746	1.00
459_A	520_V	0.745	1.00
184_V	203_T	0.743	1.00
95_L	98_L	0.743	1.00
28_G	204_H	0.742	1.00
31_L	57_D	0.741	1.00
29_D	32_R	0.739	1.00
284_M	317_R	0.739	1.00
117_F	199_L	0.738	1.00
284_M	288_D	0.736	1.00
128_I	154_I	0.736	1.00
103_V	123_A	0.735	1.00
215_V	245_G	0.735	1.00
464_P	469_G	0.735	1.00
28_G	96_F	0.734	1.00
378_T	429_A	0.730	1.00
415_V	423_I	0.727	1.00
179_V	204_H	0.725	1.00
263_D	267_L	0.725	1.00
112_S	196_L	0.724	1.00
268_I	273_V	0.722	1.00
364_R	384_R	0.721	1.00
463_M	471_R	0.721	1.00
329_V	338_N	0.720	1.00
266_P	269_E	0.719	1.00
335_G	383_T	0.717	1.00
65_A	172_E	0.714	1.00
475_F	528_A	0.713	1.00
313_E	316_R	0.712	1.00
435_R	472_S	0.712	1.00
82_L	88_F	0.711	1.00
480_D	483_P	0.711	1.00
186_F	202_R	0.711	1.00
85_I	129_P	0.710	1.00
375_P	419_R	0.709	1.00
335_G	339_Y	0.708	1.00
410_R	429_A	0.708	1.00
50_H	252_R	0.708	1.00
454_A	478_P	0.706	1.00
220_L	275_I	0.705	1.00
48_N	271_E	0.698	1.00
464_P	468_L	0.698	1.00
295_D	298_S	0.698	1.00
40_D	52_S	0.698	1.00
210_S	336_L	0.697	1.00
277_A	329_V	0.697	1.00
81_Q	126_Y	0.696	1.00
28_G	32_R	0.695	1.00
73_Q	100_A	0.693	1.00
395_A	399_N	0.693	1.00
38_Y	54_R	0.693	1.00
405_E	410_R	0.692	1.00
259_P	282_L	0.692	1.00
345_P	348_I	0.692	1.00
293_R	321_V	0.691	1.00
449_L	458_A	0.691	1.00
79_V	121_A	0.690	1.00
256_S	264_A	0.687	1.00
448_H	491_F	0.685	1.00
35_A	39_G	0.685	1.00
238_L	277_A	0.684	1.00
34_R	250_G	0.683	1.00
210_S	338_N	0.681	1.00
128_I	132_Y	0.681	1.00
63_L	67_F	0.679	1.00
310_F	326_L	0.679	1.00
221_D	301_Q	0.678	1.00
78_V	125_A	0.678	1.00
81_Q	132_Y	0.678	1.00
443_E	446_E	0.677	1.00
63_L	66_G	0.677	1.00
228_A	242_G	0.677	1.00
300_L	303_L	0.676	1.00
64_A	94_A	0.675	1.00
227_L	267_L	0.675	1.00
91_V	95_L	0.672	1.00
303_L	318_V	0.672	1.00
492_L	497_L	0.672	1.00
92_I	244_L	0.671	1.00
68_Q	177_P	0.669	1.00
328_Q	351_N	0.668	1.00
73_Q	124_A	0.668	1.00
485_A	489_K	0.668	1.00
229_A	279_V	0.662	1.00
266_P	295_D	0.662	1.00
357_M	361_D	0.662	1.00
149_P	152_K	0.659	1.00
456_H	478_P	0.658	1.00
236_Y	277_A	0.658	1.00
74_Q	177_P	0.658	1.00
217_V	359_P	0.658	1.00
513_P	525_L	0.658	1.00
206_D	390_R	0.657	1.00
415_V	426_E	0.657	1.00
30_L	208_I	0.656	1.00
226_Y	275_I	0.653	1.00
284_M	313_E	0.651	1.00
442_A	460_M	0.649	1.00
119_E	150_T	0.647	1.00
365_V	417_L	0.645	1.00
269_E	298_S	0.644	1.00
182_S	390_R	0.644	1.00
68_Q	174_V	0.644	1.00
110_R	113_E	0.642	1.00
140_L	143_Q	0.641	1.00
71_G	100_A	0.641	1.00
459_A	522_K	0.641	1.00
268_I	276_T	0.641	1.00
388_T	409_Y	0.639	1.00
330_F	339_Y	0.638	1.00
36_A	57_D	0.638	1.00
276_T	303_L	0.636	1.00
435_R	468_L	0.634	1.00
82_L	127_I	0.634	1.00
227_L	268_I	0.634	1.00
470_E	526_R	0.633	1.00
294_R	297_L	0.633	1.00
120_F	393_Y	0.632	1.00
430_K	470_E	0.631	1.00
62_R	172_E	0.631	1.00
38_Y	250_G	0.628	1.00
332_M	335_G	0.627	1.00
122_E	393_Y	0.626	1.00
51_W	55_E	0.624	1.00
442_A	522_K	0.624	1.00
77_R	394_K	0.624	1.00
74_Q	179_V	0.623	1.00
186_F	207_Y	0.622	1.00
455_V	458_A	0.619	1.00
82_L	91_V	0.618	1.00
269_E	299_S	0.618	1.00
465_D	468_L	0.617	1.00
60_A	64_A	0.617	1.00
456_H	480_D	0.616	1.00
87_E	129_P	0.613	1.00
230_L	277_A	0.613	1.00
93_F	244_L	0.613	1.00
46_C	257_P	0.612	1.00
60_A	63_L	0.610	1.00
499_A	502_I	0.610	1.00
103_V	189_L	0.609	1.00
61_D	174_V	0.607	1.00
61_D	173_P	0.606	1.00
332_M	411_T	0.605	1.00
68_Q	176_L	0.605	1.00
252_R	271_E	0.604	1.00
389_I	402_S	0.603	1.00
82_L	129_P	0.603	1.00
139_S	143_Q	0.603	1.00
365_V	381_L	0.602	1.00
476_I	488_L	0.602	1.00
319_K	325_T	0.602	1.00
448_H	497_L	0.599	1.00
38_Y	222_H	0.599	1.00
141_A	144_V	0.599	1.00
196_L	395_A	0.599	1.00
65_A	174_V	0.599	1.00
265_F	297_L	0.598	1.00
242_G	277_A	0.598	1.00
220_L	251_G	0.598	1.00
449_L	492_L	0.595	1.00
174_V	177_P	0.594	1.00
327_Q	343_D	0.594	1.00
119_E	147_K	0.593	1.00
66_G	170_H	0.593	1.00
44_I	253_V	0.593	1.00
475_F	507_E	0.593	1.00
133_S	156_V	0.590	1.00
362_E	408_F	0.590	1.00
65_A	173_P	0.589	1.00
166_L	169_L	0.589	1.00
478_P	483_P	0.589	1.00
228_A	253_V	0.589	1.00
277_A	306_G	0.588	1.00
455_V	476_I	0.588	1.00
104_F	188_Q	0.587	1.00
309_K	425_V	0.587	1.00
259_P	264_A	0.586	1.00
30_L	248_Y	0.585	1.00
461_V	526_R	0.585	1.00
210_S	214_S	0.585	1.00
376_G	416_R	0.584	1.00
225_V	228_A	0.582	1.00
122_E	150_T	0.581	1.00
128_I	133_S	0.581	1.00
267_L	270_R	0.581	1.00
353_Q	415_V	0.581	1.00
113_E	444_E	0.580	1.00
187_L	201_P	0.580	1.00
120_F	199_L	0.579	1.00
28_G	97_R	0.578	1.00
391_G	396_E	0.578	1.00
316_R	319_K	0.577	1.00
212_K	216_E	0.575	1.00
42_I	225_V	0.575	1.00
90_E	166_L	0.575	1.00
310_F	328_Q	0.575	1.00
264_A	268_I	0.574	1.00
507_E	528_A	0.574	1.00
62_R	65_A	0.573	1.00
211_L	244_L	0.573	1.00
395_A	401_A	0.573	1.00
101_L	187_L	0.572	1.00
67_F	125_A	0.572	1.00
53_Y	251_G	0.571	1.00
92_I	243_V	0.570	1.00
82_L	128_I	0.569	1.00
433_I	462_S	0.569	1.00
306_G	329_V	0.564	1.00
314_A	317_R	0.564	1.00
125_A	155_I	0.563	1.00
489_K	492_L	0.563	1.00
229_A	278_L	0.562	1.00
212_K	248_Y	0.562	1.00
230_L	238_L	0.562	1.00
372_D	382_L	0.561	1.00
447_N	451_A	0.561	1.00
466_Q	469_G	0.560	1.00
442_A	462_S	0.560	1.00
126_Y	141_A	0.559	1.00
372_D	417_L	0.556	1.00
305_V	326_L	0.556	1.00
289_A	292_S	0.556	1.00
101_L	393_Y	0.556	1.00
45_T	48_N	0.555	1.00
435_R	470_E	0.555	1.00
77_R	123_A	0.554	1.00
305_V	328_Q	0.554	1.00
80_V	95_L	0.553	1.00
365_V	379_G	0.552	1.00
446_E	474_V	0.552	1.00
318_V	326_L	0.552	1.00
445_V	472_S	0.549	1.00
280_P	308_A	0.548	1.00
121_A	199_L	0.548	1.00
156_V	159_E	0.548	1.00
65_A	170_H	0.548	1.00
212_K	215_V	0.548	1.00
80_V	88_F	0.547	1.00
400_A	405_E	0.546	1.00
399_N	402_S	0.546	1.00
183_D	204_H	0.546	1.00
226_Y	251_G	0.544	1.00
457_D	512_F	0.543	1.00
502_I	506_V	0.542	1.00
195_G	441_A	0.542	1.00
72_I	124_A	0.541	1.00
447_N	450_L	0.541	1.00
306_G	338_N	0.540	1.00
465_D	469_G	0.540	1.00
427_G	442_A	0.539	1.00
29_D	178_E	0.539	1.00
121_A	187_L	0.537	1.00
329_V	341_R	0.537	1.00
101_L	104_F	0.536	1.00
383_T	388_T	0.534	1.00
303_L	324_C	0.534	1.00
285_V	288_D	0.533	1.00
452_H	455_V	0.532	1.00
291_S	294_R	0.532	1.00
290_A	294_R	0.531	1.00
61_D	68_Q	0.529	1.00
237_P	332_M	0.528	1.00
59_R	63_L	0.528	1.00
505_R	508_F	0.528	1.00
454_A	491_F	0.528	1.00
26_T	204_H	0.527	1.00
287_M	314_A	0.526	1.00
289_A	293_R	0.526	1.00
458_A	492_L	0.525	1.00
228_A	255_L	0.525	1.00
367_D	370_D	0.524	1.00
463_M	475_F	0.522	1.00
340_T	353_Q	0.522	1.00
213_R	217_V	0.522	1.00
53_Y	247_L	0.521	1.00
220_L	245_G	0.521	1.00
109_H	114_I	0.520	1.00
103_V	117_F	0.520	1.00
511_S	514_Q	0.518	1.00
105_A	118_C	0.517	1.00
396_E	399_N	0.517	1.00
200_I	333_A	0.515	1.00
315_A	328_Q	0.515	1.00
211_L	245_G	0.514	1.00
256_S	259_P	0.512	1.00
264_A	282_L	0.511	1.00
268_I	272_K	0.511	1.00
427_G	443_E	0.511	1.00
83_P	258_S	0.510	1.00
83_P	132_Y	0.509	1.00
434_N	441_A	0.509	1.00
366_W	370_D	0.508	1.00
227_L	264_A	0.508	1.00
265_F	286_W	0.507	1.00
339_Y	361_D	0.506	1.00
210_S	339_Y	0.506	1.00
133_S	139_S	0.505	1.00
65_A	69_K	0.505	1.00
305_V	318_V	0.505	1.00
344_D	347_E	0.503	1.00
261_P	289_A	0.502	1.00
32_R	174_V	0.502	1.00
377_E	416_R	0.501	1.00
431_D	442_A	0.501	1.00
44_I	51_W	0.500	1.00
44_I	56_L	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1mdbA	1	0.9944	100	0.113	Contact Map
3o83A	1	0.7996	100	0.151	Contact Map
3tsyA	2	0.7718	100	0.153	Contact Map
4iz6A	2	0.9907	100	0.165	Contact Map
1v25A	2	0.9035	100	0.17	Contact Map
2d1sA	1	0.9555	100	0.17	Contact Map
3ni2A	1	0.9481	100	0.17	Contact Map
3etcA	2	0.9369	100	0.174	Contact Map
3g7sA	2	0.8738	100	0.176	Contact Map
2vsqA	1	0.9555	100	0.176	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0144 seconds.