PROA - BACSU - GREMLIN Contacts

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PROA - Gamma-glutamyl phosphate reductase

UniProt:	P39821	Sequences: MSEVSVKAKLAKEAAAEMIMKTTAEKDEALSLIANGLRKELDFLLAENAKDIVNGKENGLTPDIIDRLSLDEKRIRDIADAVELLIDLADPIGDSLETIEKENGLFIEKIRVPLGVVGMIYEARPNVTVDAATLCLKTGNAVVLRGSSSAIHSNKALVSVIYRALEQSALPIHAVQLIEDTSRETAKELFTLNDGLDVLIPRGGKKLIDLVVRESTVPVLETGAGNCHIFIDETAKPQMAEKVVVNAKTQRPSVCNAIESLLIHKAWARQHGKELLDQLENAGVEIRGDELVCELHPSSKQASKEDWETEFLAPVLSVKTVENVQEAVKHIQQYGTNHSEAILTENDKNAVYFQTAVDAAAVYHNASTRFTDGFEFGYGAEIGISTQKLHARGPMGLPALTSTKYIIKGTGQIRE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	415 (382)
Sequences:	38355 (22680)
Seq/√Len:	1160.4

ECOLI - PROA ALDB PUUC BETB GABD FEAB ABDH ALDA ASTD EUTE SAD PUTA PAAZ ADHE
BACSU - PROA ROCA2 ALDH4 ROCA ALDH5 GABD ALDH1 IOLA ALDY ALDH2 BETB ALDH3
HALSA - Q9HMJ6 Q9HQZ2 Q9HRB5 Q9HR91
SULSO - GAPN Q97YT9 KGSDH Q97XS9 Q97XA5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
265_K	322_E	4.806	1.00
268_A	320_T	3.167	1.00
265_K	320_T	3.073	1.00
238_Q	274_E	3.014	1.00
233_E	266_A	2.777	1.00
12_K	195_G	2.777	1.00
156_A	159_S	2.746	1.00
344_T	350_A	2.720	1.00
242_K	278_Q	2.714	1.00
233_E	264_H	2.695	1.00
40_E	43_F	2.646	1.00
298_S	305_E	2.499	1.00
272_G	318_V	2.432	1.00
33_I	161_I	2.299	1.00
162_Y	172_I	2.296	1.00
38_R	83_E	2.255	1.00
352_Y	356_A	2.239	1.00
335_G	381_E	2.211	1.00
297_P	301_Q	2.208	1.00
36_G	167_Q	2.204	1.00
191_T	214_E	2.200	1.00
324_V	349_N	2.144	1.00
12_K	197_D	2.124	1.00
43_F	156_A	2.108	1.00
41_L	76_R	2.064	1.00
187_K	191_T	2.050	1.00
229_I	244_V	2.045	1.00
293_C	297_P	2.041	1.00
112_V	404_K	2.037	1.00
36_G	39_K	2.004	1.00
111_R	398_P	1.999	1.00
276_L	280_E	1.998	1.00
209_D	381_E	1.977	1.00
31_S	83_E	1.957	1.00
270_Q	274_E	1.938	1.00
234_T	349_N	1.909	1.00
307_W	319_K	1.885	1.00
322_E	326_E	1.849	1.00
9_K	195_G	1.841	1.00
5_S	188_E	1.837	1.00
210_L	213_R	1.830	1.00
262_L	330_H	1.791	1.00
22_T	25_E	1.790	1.00
232_D	349_N	1.787	1.00
29_A	170_L	1.772	1.00
32_L	35_N	1.730	1.00
111_R	401_T	1.730	1.00
36_G	160_V	1.723	1.00
158_V	177_L	1.722	1.00
274_E	277_D	1.714	1.00
302_A	330_H	1.701	1.00
47_E	156_A	1.674	1.00
42_D	72_E	1.664	1.00
5_S	9_K	1.652	1.00
243_V	343_L	1.650	1.00
249_T	279_L	1.649	1.00
358_D	380_A	1.646	1.00
324_V	352_Y	1.646	1.00
241_E	274_E	1.627	1.00
20_M	356_A	1.626	1.00
294_E	305_E	1.622	1.00
187_K	214_E	1.621	1.00
25_E	28_E	1.612	1.00
326_E	329_K	1.610	1.00
273_K	277_D	1.607	1.00
264_H	321_V	1.599	1.00
268_A	272_G	1.599	1.00
35_N	39_K	1.595	1.00
229_I	258_I	1.573	1.00
110_I	355_T	1.573	1.00
340_E	359_A	1.571	1.00
278_Q	281_N	1.561	1.00
40_E	167_Q	1.557	1.00
305_E	309_T	1.543	1.00
21_K	25_E	1.523	1.00
262_L	321_V	1.513	1.00
15_A	19_I	1.504	1.00
237_P	274_E	1.499	1.00
326_E	330_H	1.478	1.00
264_H	323_N	1.477	1.00
42_D	46_A	1.468	1.00
46_A	50_K	1.466	1.00
38_R	79_A	1.450	1.00
141_A	174_A	1.450	1.00
40_E	156_A	1.446	1.00
233_E	349_N	1.433	1.00
5_S	193_N	1.432	1.00
187_K	210_L	1.416	1.00
198_V	220_L	1.413	1.00
262_L	327_A	1.409	1.00
294_E	298_S	1.402	1.00
261_L	316_L	1.400	1.00
148_S	183_R	1.398	1.00
267_W	270_Q	1.381	1.00
354_Q	406_I	1.378	1.00
244_V	271_H	1.377	1.00
82_V	130_D	1.377	1.00
269_R	320_T	1.363	1.00
88_L	91_P	1.363	1.00
270_Q	273_K	1.362	1.00
212_V	384_I	1.358	1.00
210_L	214_E	1.351	1.00
41_L	72_E	1.350	1.00
325_Q	352_Y	1.346	1.00
263_I	271_H	1.340	1.00
244_V	261_L	1.340	1.00
325_Q	356_A	1.333	1.00
274_E	278_Q	1.331	1.00
277_D	281_N	1.325	1.00
181_T	184_E	1.320	1.00
297_P	300_K	1.319	1.00
295_L	299_S	1.311	1.00
129_V	144_L	1.311	1.00
295_L	311_F	1.306	1.00
34_A	38_R	1.303	1.00
303_S	308_E	1.301	1.00
36_G	168_S	1.297	1.00
230_F	327_A	1.297	1.00
119_M	142_V	1.296	1.00
245_V	278_Q	1.293	1.00
395_M	398_P	1.288	1.00
232_D	321_V	1.288	1.00
46_A	288_G	1.285	1.00
277_D	280_E	1.278	1.00
272_G	276_L	1.275	1.00
232_D	353_F	1.273	1.00
321_V	330_H	1.272	1.00
82_V	134_L	1.271	1.00
350_A	364_H	1.268	1.00
50_K	152_H	1.266	1.00
155_K	179_E	1.265	1.00
394_P	398_P	1.264	1.00
269_R	273_K	1.262	1.00
114_L	198_V	1.250	1.00
10_L	173_H	1.234	1.00
15_A	141_A	1.233	1.00
9_K	13_E	1.223	1.00
290_E	294_E	1.220	1.00
21_K	29_A	1.214	1.00
31_S	87_D	1.209	1.00
111_R	403_T	1.203	1.00
32_L	36_G	1.198	1.00
158_V	175_V	1.196	1.00
328_V	353_F	1.194	1.00
8_A	196_L	1.193	1.00
271_H	275_L	1.193	1.00
323_N	326_E	1.193	1.00
108_E	351_V	1.187	1.00
3_E	6_V	1.183	1.00
173_H	176_Q	1.179	1.00
264_H	267_W	1.173	1.00
10_L	176_Q	1.172	1.00
302_A	333_Q	1.171	1.00
159_S	167_Q	1.171	1.00
206_K	210_L	1.160	1.00
340_E	362_V	1.160	1.00
46_A	56_K	1.158	1.00
8_A	195_G	1.148	1.00
108_E	408_K	1.136	1.00
23_T	27_D	1.135	1.00
275_L	316_L	1.134	1.00
212_V	219_V	1.127	1.00
49_A	287_R	1.126	1.00
4_V	185_T	1.123	1.00
295_L	298_S	1.121	1.00
44_L	156_A	1.119	1.00
325_Q	329_K	1.117	1.00
234_T	346_N	1.115	1.00
8_A	193_N	1.111	1.00
236_K	345_E	1.107	1.00
395_M	403_T	1.106	1.00
35_N	83_E	1.097	1.00
239_M	345_E	1.094	1.00
209_D	213_R	1.093	1.00
286_I	289_D	1.093	1.00
95_S	394_P	1.091	1.00
207_L	210_L	1.089	1.00
118_G	196_L	1.086	1.00
324_V	353_F	1.084	1.00
33_I	160_V	1.077	1.00
229_I	343_L	1.072	1.00
161_I	175_V	1.072	1.00
290_E	293_C	1.070	1.00
236_K	239_M	1.060	1.00
38_R	76_R	1.059	1.00
78_I	130_D	1.057	1.00
118_G	189_L	1.057	1.00
40_E	160_V	1.056	1.00
56_K	72_E	1.055	1.00
117_V	198_V	1.050	1.00
36_G	40_E	1.048	1.00
346_N	349_N	1.047	1.00
119_M	200_I	1.047	1.00
239_M	243_V	1.046	1.00
114_L	218_P	1.045	1.00
38_R	41_L	1.042	1.00
28_E	32_L	1.040	1.00
158_V	162_Y	1.035	1.00
6_V	10_L	1.035	1.00
328_V	356_A	1.031	1.00
230_F	353_F	1.027	1.00
351_V	355_T	1.027	1.00
321_V	327_A	1.021	1.00
377_G	386_T	1.021	1.00
329_K	333_Q	1.020	1.00
16_A	329_K	1.020	1.00
308_E	335_G	1.020	1.00
12_K	16_A	1.017	1.00
43_F	46_A	1.017	1.00
237_P	241_E	1.015	1.00
133_T	175_V	1.014	1.00
31_S	35_N	1.013	1.00
155_K	159_S	1.013	1.00
308_E	333_Q	1.011	1.00
27_D	31_S	1.007	1.00
292_V	313_A	1.004	1.00
14_A	141_A	1.002	1.00
379_G	402_S	1.001	1.00
110_I	406_I	1.000	1.00
116_V	141_A	0.999	1.00
33_I	82_V	0.996	1.00
308_E	334_Y	0.993	1.00
230_F	331_I	0.993	1.00
44_L	160_V	0.991	1.00
226_N	259_E	0.991	1.00
386_T	402_S	0.987	1.00
33_I	170_L	0.984	1.00
133_T	142_V	0.981	1.00
40_E	159_S	0.974	1.00
124_R	254_V	0.974	1.00
16_A	358_D	0.966	1.00
148_S	181_T	0.965	1.00
247_A	258_I	0.962	1.00
20_M	355_T	0.957	1.00
212_V	216_T	0.955	1.00
347_D	351_V	0.953	1.00
18_M	174_A	0.944	1.00
11_A	176_Q	0.940	1.00
43_F	159_S	0.936	1.00
50_K	288_G	0.932	1.00
341_A	367_S	0.932	1.00
52_I	150_A	0.932	1.00
186_A	190_F	0.928	1.00
107_I	374_F	0.925	1.00
31_S	86_I	0.925	1.00
291_L	294_E	0.919	1.00
232_D	264_H	0.915	1.00
159_S	162_Y	0.911	1.00
248_K	259_E	0.909	1.00
4_V	118_G	0.907	1.00
328_V	332_Q	0.900	1.00
34_A	79_A	0.898	1.00
228_H	340_E	0.897	1.00
11_A	141_A	0.895	1.00
183_R	187_K	0.893	1.00
6_V	9_K	0.890	1.00
138_T	401_T	0.890	1.00
238_Q	270_Q	0.889	1.00
298_S	301_Q	0.888	1.00
112_V	355_T	0.886	1.00
112_V	379_G	0.885	1.00
340_E	357_V	0.878	1.00
197_D	358_D	0.877	1.00
95_S	395_M	0.877	1.00
319_K	330_H	0.875	1.00
19_I	358_D	0.874	1.00
232_D	344_T	0.874	1.00
291_L	295_L	0.873	1.00
16_A	20_M	0.873	1.00
347_D	350_A	0.872	1.00
351_V	408_K	0.872	1.00
78_I	126_N	0.870	1.00
241_E	278_Q	0.868	1.00
155_K	177_L	0.867	1.00
116_V	196_L	0.867	1.00
374_F	405_Y	0.863	1.00
39_K	167_Q	0.862	1.00
135_C	142_V	0.862	1.00
208_I	221_E	0.858	1.00
232_D	324_V	0.852	1.00
212_V	215_S	0.848	1.00
130_D	157_L	0.846	1.00
188_E	193_N	0.843	1.00
199_L	215_S	0.842	1.00
269_R	272_G	0.840	1.00
114_L	402_S	0.838	1.00
146_G	179_E	0.837	1.00
49_A	71_D	0.837	1.00
237_P	267_W	0.836	1.00
359_A	362_V	0.834	1.00
213_R	216_T	0.829	1.00
170_L	174_A	0.828	1.00
29_A	168_S	0.826	1.00
106_F	351_V	0.825	1.00
218_P	402_S	0.825	1.00
34_A	83_E	0.823	1.00
144_L	154_N	0.821	1.00
292_V	315_V	0.817	1.00
234_T	344_T	0.817	1.00
190_F	211_V	0.813	1.00
295_L	300_K	0.812	1.00
245_V	282_A	0.809	1.00
293_C	296_H	0.807	1.00
302_A	319_K	0.807	1.00
129_V	154_N	0.807	1.00
342_I	353_F	0.807	1.00
205_K	381_E	0.806	1.00
208_I	223_G	0.804	1.00
49_A	56_K	0.803	1.00
268_A	318_V	0.800	1.00
273_K	276_L	0.797	1.00
188_E	191_T	0.797	1.00
72_E	76_R	0.795	1.00
205_K	209_D	0.794	1.00
293_C	300_K	0.792	1.00
54_N	58_N	0.791	1.00
12_K	15_A	0.791	1.00
32_L	168_S	0.791	1.00
13_E	17_E	0.790	1.00
14_A	174_A	0.790	1.00
240_A	244_V	0.789	1.00
107_I	405_Y	0.785	1.00
228_H	331_I	0.778	1.00
41_L	45_L	0.776	1.00
321_V	326_E	0.776	1.00
114_L	140_N	0.773	1.00
47_E	152_H	0.772	1.00
234_T	345_E	0.772	1.00
162_Y	173_H	0.770	1.00
201_P	207_L	0.768	1.00
295_L	305_E	0.768	1.00
227_C	259_E	0.767	1.00
239_M	242_K	0.765	1.00
56_K	288_G	0.759	1.00
347_D	408_K	0.758	1.00
119_M	132_A	0.758	1.00
190_F	214_E	0.758	1.00
231_I	240_A	0.756	1.00
13_E	16_A	0.756	1.00
118_G	199_L	0.756	1.00
17_E	21_K	0.755	1.00
76_R	80_D	0.752	1.00
327_A	330_H	0.748	1.00
345_E	348_K	0.743	1.00
30_L	137_K	0.742	1.00
43_F	47_E	0.742	1.00
238_Q	278_Q	0.742	1.00
204_G	207_L	0.741	1.00
190_F	199_L	0.741	1.00
126_N	153_S	0.740	1.00
89_A	137_K	0.740	1.00
285_E	289_D	0.740	1.00
129_V	133_T	0.739	1.00
121_Y	129_V	0.738	1.00
264_H	324_V	0.736	1.00
254_V	257_A	0.735	1.00
16_A	19_I	0.734	1.00
45_L	72_E	0.733	1.00
294_E	297_P	0.732	1.00
35_N	38_R	0.731	1.00
215_S	219_V	0.730	1.00
45_L	49_A	0.728	1.00
114_L	197_D	0.725	1.00
5_S	195_G	0.724	1.00
118_G	186_A	0.724	1.00
129_V	157_L	0.722	1.00
31_S	90_D	0.720	1.00
276_L	279_L	0.719	1.00
241_E	275_L	0.719	1.00
241_E	271_H	0.718	1.00
181_T	185_T	0.716	1.00
156_A	160_V	0.716	1.00
18_M	29_A	0.712	1.00
107_I	407_I	0.711	1.00
231_I	271_H	0.710	1.00
238_Q	242_K	0.710	1.00
354_Q	364_H	0.709	1.00
24_A	28_E	0.709	1.00
262_L	307_W	0.709	1.00
17_E	20_M	0.708	1.00
46_A	49_A	0.706	1.00
37_L	78_I	0.705	1.00
212_V	221_E	0.705	1.00
279_L	282_A	0.704	1.00
48_N	51_D	0.701	1.00
144_L	175_V	0.699	1.00
110_I	404_K	0.698	1.00
324_V	356_A	0.698	1.00
45_L	56_K	0.697	1.00
25_E	29_A	0.697	1.00
54_N	74_R	0.697	1.00
229_I	341_A	0.697	1.00
302_A	307_W	0.696	1.00
34_A	76_R	0.696	1.00
263_I	267_W	0.696	1.00
7_K	178_I	0.693	1.00
8_A	143_V	0.692	1.00
184_E	187_K	0.692	1.00
199_L	211_V	0.691	1.00
330_H	333_Q	0.691	1.00
109_K	403_T	0.688	1.00
324_V	328_V	0.688	1.00
237_P	270_Q	0.686	1.00
182_S	185_T	0.684	1.00
162_Y	167_Q	0.684	1.00
19_I	356_A	0.683	1.00
4_V	188_E	0.683	1.00
16_A	356_A	0.683	1.00
183_R	210_L	0.683	1.00
7_K	176_Q	0.681	1.00
218_P	399_A	0.681	1.00
328_V	352_Y	0.679	1.00
220_L	399_A	0.677	1.00
287_R	315_V	0.676	1.00
245_V	275_L	0.674	1.00
244_V	275_L	0.673	1.00
341_A	368_T	0.672	1.00
23_T	137_K	0.671	1.00
240_A	271_H	0.668	1.00
14_A	17_E	0.662	1.00
237_P	271_H	0.658	1.00
76_R	79_A	0.658	1.00
348_K	351_V	0.658	1.00
18_M	136_L	0.658	1.00
398_P	403_T	0.657	1.00
32_L	167_Q	0.656	1.00
19_I	113_P	0.653	1.00
241_E	245_V	0.652	1.00
350_A	354_Q	0.649	1.00
358_D	379_G	0.646	1.00
48_N	153_S	0.645	1.00
161_I	170_L	0.640	1.00
140_N	401_T	0.639	1.00
379_G	386_T	0.639	1.00
108_E	406_I	0.639	1.00
19_I	112_V	0.637	1.00
248_K	316_L	0.636	1.00
265_K	268_A	0.634	1.00
77_D	81_A	0.632	1.00
4_V	8_A	0.629	1.00
302_A	329_K	0.629	1.00
344_T	349_N	0.628	1.00
339_S	363_Y	0.628	1.00
132_A	200_I	0.628	1.00
238_Q	277_D	0.627	1.00
398_P	401_T	0.627	1.00
27_D	137_K	0.627	1.00
16_A	332_Q	0.625	1.00
105_L	366_A	0.624	1.00
296_H	315_V	0.623	1.00
28_E	31_S	0.623	1.00
295_L	309_T	0.620	1.00
363_Y	366_A	0.620	1.00
311_F	315_V	0.619	1.00
146_G	154_N	0.618	1.00
10_L	172_I	0.614	1.00
34_A	86_I	0.612	1.00
10_L	13_E	0.610	1.00
348_K	352_Y	0.609	1.00
262_L	302_A	0.606	1.00
133_T	144_L	0.606	1.00
132_A	387_Q	0.606	1.00
126_N	157_L	0.601	1.00
152_H	155_K	0.600	1.00
247_A	367_S	0.599	1.00
9_K	12_K	0.596	1.00
92_I	401_T	0.594	1.00
219_V	384_I	0.593	1.00
148_S	210_L	0.591	1.00
231_I	235_A	0.590	1.00
29_A	169_A	0.588	1.00
261_L	271_H	0.586	1.00
242_K	246_N	0.586	1.00
331_I	357_V	0.585	1.00
342_I	364_H	0.584	1.00
183_R	206_K	0.584	1.00
37_L	79_A	0.583	1.00
117_V	140_N	0.582	1.00
47_E	50_K	0.582	1.00
138_T	397_L	0.582	1.00
307_W	317_S	0.582	1.00
143_V	176_Q	0.581	1.00
190_F	210_L	0.580	1.00
11_A	116_V	0.580	1.00
184_E	188_E	0.579	1.00
353_F	357_V	0.578	1.00
170_L	175_V	0.578	1.00
361_A	370_F	0.577	1.00
364_H	408_K	0.576	1.00
11_A	143_V	0.575	1.00
127_V	131_A	0.575	1.00
327_A	331_I	0.575	1.00
116_V	197_D	0.575	1.00
342_I	350_A	0.573	1.00
275_L	279_L	0.571	1.00
75_I	79_A	0.570	1.00
54_N	124_R	0.570	1.00
44_L	126_N	0.569	1.00
263_I	318_V	0.567	1.00
157_L	161_I	0.565	1.00
49_A	53_V	0.564	1.00
189_L	196_L	0.564	1.00
36_G	169_A	0.562	1.00
112_V	358_D	0.562	1.00
136_L	175_V	0.561	1.00
75_I	78_I	0.560	1.00
10_L	14_A	0.559	1.00
261_L	318_V	0.559	1.00
305_E	308_E	0.558	1.00
148_S	206_K	0.556	1.00
200_I	400_L	0.555	1.00
323_N	329_K	0.555	1.00
275_L	318_V	0.555	1.00
249_T	282_A	0.555	1.00
131_A	392_R	0.553	1.00
198_V	399_A	0.552	1.00
206_K	209_D	0.548	1.00
87_D	90_D	0.546	1.00
328_V	357_V	0.546	1.00
71_D	74_R	0.545	1.00
12_K	116_V	0.545	1.00
296_H	300_K	0.544	1.00
239_M	343_L	0.544	1.00
182_S	186_A	0.541	1.00
33_I	36_G	0.540	1.00
148_S	182_S	0.540	1.00
194_D	335_G	0.539	1.00
27_D	86_I	0.538	1.00
121_Y	128_T	0.538	1.00
349_N	352_Y	0.538	1.00
37_L	157_L	0.537	1.00
27_D	90_D	0.537	1.00
229_I	261_L	0.537	1.00
130_D	134_L	0.536	1.00
237_P	240_A	0.536	1.00
52_I	250_Q	0.536	1.00
250_Q	254_V	0.536	1.00
362_V	404_K	0.536	1.00
233_E	267_W	0.536	1.00
205_K	335_G	0.534	1.00
292_V	299_S	0.533	1.00
42_D	56_K	0.532	1.00
306_D	311_F	0.532	1.00
358_D	402_S	0.532	1.00
366_A	369_R	0.532	1.00
302_A	308_E	0.530	1.00
37_L	44_L	0.530	1.00
23_T	86_I	0.529	1.00
49_A	288_G	0.529	1.00
92_I	397_L	0.527	1.00
351_V	354_Q	0.527	1.00
48_N	126_N	0.525	1.00
235_A	240_A	0.523	1.00
252_P	314_P	0.521	1.00
31_S	34_A	0.521	1.00
48_N	52_I	0.520	1.00
296_H	299_S	0.519	1.00
141_A	176_Q	0.519	1.00
120_I	211_V	0.518	1.00
117_V	142_V	0.517	1.00
48_N	74_R	0.517	1.00
255_C	310_E	0.516	1.00
82_V	133_T	0.515	1.00
45_L	75_I	0.514	1.00
88_L	394_P	0.513	1.00
37_L	126_N	0.511	1.00
227_C	339_S	0.510	1.00
150_A	154_N	0.508	1.00
340_E	353_F	0.506	1.00
384_I	402_S	0.503	1.00
258_I	341_A	0.502	1.00
105_L	407_I	0.500	1.00
247_A	257_A	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3ek1A	5	0.9398	100	0.121	Contact Map
3u4jA	4	0.9446	100	0.123	Contact Map
4pz2A	4	0.9446	100	0.124	Contact Map
4lihA	5	0.9349	100	0.124	Contact Map
1a4sA	4	0.9422	100	0.125	Contact Map
3r31A	4	0.9253	100	0.125	Contact Map
4yweA	5	0.9325	100	0.125	Contact Map
2d4eA	4	0.9446	100	0.125	Contact Map
2o2pA	5	0.9398	100	0.126	Contact Map
4o5hA	4	0.9422	100	0.126	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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