PTTBC - BACSU - GREMLIN Contacts

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PTTBC - PTS system trehalose-specific EIIBC component

UniProt:	P39794	Sequences: MGELNKSARQIVEAVGGAENIAAATHCVTRLRFALIDESKVDQEMLDQIDVVKGSFSTNGQFQVVIGQGTVNKVYAELVKETGIGESTKDEVKKASEKNMNPLQRAVKTLADIFIPILPAIVTAGLLMGINNILTAEGIFFSTKSIVQVYPQWADLANMINLIAGTAFTFLPALIGWSAVKRFGGNPLLGIVLGVMLVHPDLLNAWGYGAAEQSGEIPVWNLFGLEVQKVGYQGQVLPILLASYMLAKIEVFLTKRTPEGIQLLVVAPITLLLTGFASFIIIGPITFAIGNVLTSGLISVFGSFAALGGLLYGGFYSALVITGMHHTFLAVDLQLIGSKLGGTFLWPMLALSNIAQGSAALAMMFIVKDEKQKGLSLTSGISAYLGITEPAIFGVNLRYRFPFIIAMVSSGLAGMYISSQGVLASSVGVGGVPGIFSIMSQYWGAFAIGMAIVLIVPFAGTYAYARFKHK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	470 (442)
Sequences:	3991 (2257)
Seq/√Len:	107.4

ECOLI - PTV3B PTTBC PTIBC PTYBC PTGCB PTOCB
BACSU - PTTBC PTV3B PTSBC SACX PTXBC PTOCB PTWCB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
42_D	45_M	4.402	1.00
416_Y	452_I	3.997	1.00
409_S	456_V	3.760	1.00
314_G	411_G	3.672	1.00
6_K	10_Q	3.587	1.00
362_A	458_F	3.412	1.00
242_A	278_S	3.315	1.00
269_I	273_L	3.220	1.00
35_L	41_V	3.204	1.00
38_E	57_S	3.122	1.00
12_V	78_L	3.006	1.00
7_S	49_I	2.874	1.00
14_A	42_D	2.872	1.00
44_E	47_D	2.831	1.00
416_Y	445_A	2.830	1.00
246_L	270_T	2.828	1.00
176_G	190_G	2.799	1.00
43_Q	62_F	2.772	1.00
412_L	456_V	2.609	1.00
37_D	40_K	2.556	1.00
405_I	464_Y	2.483	1.00
5_N	9_R	2.454	1.00
257_T	265_V	2.428	1.00
54_G	65_V	2.428	1.00
50_D	371_K	2.422	1.00
356_Q	396_N	2.419	1.00
77_E	80_K	2.374	1.00
100_M	105_R	2.366	1.00
22_A	36_I	2.341	1.00
18_A	83_G	2.303	1.00
33_F	64_V	2.298	1.00
177_W	191_I	2.279	1.00
252_F	256_R	2.275	1.00
416_Y	420_Q	2.236	1.00
14_A	49_I	2.215	1.00
253_L	269_I	2.191	1.00
447_A	451_A	2.191	1.00
335_L	343_T	2.184	1.00
43_Q	47_D	2.179	1.00
43_Q	57_S	2.161	1.00
14_A	45_M	2.155	1.00
245_M	277_A	2.153	1.00
5_N	77_E	2.149	1.00
254_T	262_Q	2.128	1.00
420_Q	445_A	2.127	1.00
77_E	81_E	2.111	1.00
33_F	78_L	2.102	1.00
299_S	303_S	2.068	1.00
177_W	187_P	2.052	1.00
24_A	78_L	2.049	1.00
15_V	33_F	2.022	1.00
173_A	195_V	2.019	1.00
12_V	82_T	1.961	1.00
367_V	372_Q	1.938	1.00
10_Q	49_I	1.937	1.00
24_A	33_F	1.937	1.00
9_R	81_E	1.917	1.00
11_I	46_L	1.907	1.00
261_I	265_V	1.883	1.00
313_G	410_S	1.847	1.00
109_T	183_F	1.835	1.00
130_I	134_L	1.802	1.00
23_A	34_A	1.756	1.00
404_I	408_V	1.755	1.00
369_D	372_Q	1.737	1.00
358_S	457_P	1.737	1.00
459_A	463_A	1.729	1.00
417_I	449_G	1.727	1.00
358_S	454_L	1.703	1.00
26_H	75_Y	1.694	1.00
405_I	460_G	1.686	1.00
248_K	251_V	1.676	1.00
10_Q	13_E	1.676	1.00
364_M	377_L	1.673	1.00
46_L	49_I	1.656	1.00
310_L	415_M	1.644	1.00
253_L	257_T	1.632	1.00
248_K	252_F	1.628	1.00
445_A	448_I	1.622	1.00
360_A	391_A	1.613	1.00
361_L	380_G	1.612	1.00
288_A	292_V	1.609	1.00
392_I	403_F	1.608	1.00
173_A	191_I	1.598	1.00
128_M	165_G	1.594	1.00
460_G	464_Y	1.593	1.00
357_G	383_A	1.593	1.00
342_G	423_L	1.573	1.00
399_Y	402_P	1.572	1.00
185_G	243_S	1.570	1.00
75_Y	79_V	1.570	1.00
241_L	286_T	1.565	1.00
45_M	48_Q	1.551	1.00
9_R	13_E	1.551	1.00
405_I	409_S	1.547	1.00
309_G	414_G	1.544	1.00
134_L	139_I	1.530	1.00
11_I	66_I	1.529	1.00
456_V	460_G	1.520	1.00
244_Y	247_A	1.519	1.00
181_K	187_P	1.501	1.00
15_V	35_L	1.484	1.00
8_A	78_L	1.480	1.00
455_I	459_A	1.478	1.00
56_F	65_V	1.478	1.00
265_V	269_I	1.464	1.00
249_I	274_T	1.457	1.00
318_A	407_M	1.457	1.00
291_N	295_S	1.449	1.00
108_K	182_R	1.440	1.00
292_V	296_G	1.429	1.00
366_I	465_A	1.412	1.00
102_P	105_R	1.403	1.00
314_G	318_A	1.401	1.00
399_Y	466_R	1.381	1.00
21_I	84_I	1.377	1.00
310_L	411_G	1.369	1.00
24_A	79_V	1.366	1.00
317_S	353_N	1.357	1.00
12_V	81_E	1.357	1.00
177_W	188_L	1.356	1.00
179_A	244_Y	1.333	0.99
372_Q	399_Y	1.331	0.99
126_L	268_P	1.324	0.99
180_V	243_S	1.318	0.99
244_Y	248_K	1.293	0.99
102_P	106_A	1.293	0.99
363_M	367_V	1.288	0.99
249_I	273_L	1.279	0.99
245_M	282_I	1.277	0.99
415_M	419_S	1.271	0.99
159_M	227_V	1.267	0.99
409_S	457_P	1.262	0.99
458_F	462_Y	1.262	0.99
70_T	259_E	1.257	0.99
309_G	415_M	1.253	0.99
416_Y	448_I	1.251	0.99
412_L	452_I	1.240	0.99
193_L	271_L	1.236	0.99
14_A	46_L	1.229	0.99
262_Q	266_V	1.229	0.99
344_F	347_P	1.224	0.99
38_E	60_G	1.224	0.99
408_V	460_G	1.210	0.99
190_G	194_G	1.203	0.99
350_A	446_F	1.202	0.99
46_L	62_F	1.198	0.99
461_T	465_A	1.196	0.99
175_I	236_V	1.195	0.99
362_A	462_Y	1.194	0.99
21_I	82_T	1.191	0.99
274_T	278_S	1.190	0.99
185_G	246_L	1.177	0.99
163_I	275_G	1.177	0.99
416_Y	449_G	1.170	0.99
296_G	299_S	1.165	0.99
66_I	70_T	1.158	0.99
12_V	21_I	1.155	0.99
178_S	188_L	1.152	0.98
245_M	274_T	1.146	0.98
46_L	52_V	1.137	0.98
141_F	153_W	1.136	0.98
7_S	51_V	1.134	0.98
365_F	458_F	1.129	0.98
5_N	81_E	1.125	0.98
380_G	384_Y	1.118	0.98
293_L	319_L	1.115	0.98
8_A	81_E	1.114	0.98
309_G	418_S	1.107	0.98
319_L	328_F	1.107	0.98
184_G	251_V	1.106	0.98
180_V	190_G	1.104	0.98
10_Q	45_M	1.102	0.98
351_L	417_I	1.101	0.98
124_A	167_A	1.100	0.98
392_I	406_A	1.094	0.98
252_F	255_K	1.094	0.98
243_S	247_A	1.094	0.98
66_I	74_V	1.091	0.98
281_I	285_I	1.089	0.98
253_L	266_V	1.083	0.98
237_L	241_L	1.079	0.98
6_K	9_R	1.079	0.98
127_L	164_A	1.075	0.98
114_F	236_V	1.071	0.98
180_V	187_P	1.069	0.98
79_V	84_I	1.068	0.98
306_A	419_S	1.066	0.97
401_F	465_A	1.064	0.97
306_A	415_M	1.060	0.97
194_G	239_I	1.057	0.97
196_M	275_G	1.054	0.97
405_I	461_T	1.052	0.97
186_N	250_E	1.048	0.97
179_A	240_L	1.042	0.97
78_L	82_T	1.041	0.97
165_G	169_T	1.040	0.97
18_A	82_T	1.040	0.97
297_L	344_F	1.038	0.97
409_S	413_A	1.034	0.97
180_V	185_G	1.030	0.97
117_I	171_L	1.022	0.97
78_L	81_E	1.019	0.97
358_S	362_A	1.018	0.97
49_I	52_V	1.017	0.97
193_L	274_T	1.015	0.97
355_A	406_A	1.013	0.97
227_V	280_I	1.011	0.97
378_T	382_S	1.008	0.96
70_T	73_K	1.007	0.96
142_S	153_W	1.004	0.96
28_V	387_I	1.004	0.96
183_F	244_Y	1.003	0.96
5_N	80_K	1.003	0.96
112_D	182_R	0.999	0.96
452_I	456_V	0.999	0.96
413_A	452_I	0.998	0.96
131_N	157_A	0.994	0.96
361_L	365_F	0.993	0.96
417_I	422_V	0.993	0.96
396_N	402_P	0.989	0.96
292_V	295_S	0.988	0.96
298_I	302_G	0.987	0.96
94_K	97_E	0.986	0.96
247_A	251_V	0.983	0.96
286_T	290_G	0.983	0.96
350_A	434_G	0.982	0.96
193_L	239_I	0.981	0.96
109_T	113_I	0.980	0.96
133_I	137_E	0.975	0.96
166_T	195_V	0.974	0.96
76_A	80_K	0.974	0.96
359_A	396_N	0.973	0.96
22_A	34_A	0.971	0.96
289_I	292_V	0.967	0.96
72_N	76_A	0.966	0.95
55_S	62_F	0.963	0.95
117_I	178_S	0.963	0.95
359_A	406_A	0.962	0.95
7_S	11_I	0.960	0.95
428_G	437_S	0.957	0.95
179_A	183_F	0.957	0.95
170_F	200_P	0.949	0.95
38_E	62_F	0.947	0.95
367_V	468_K	0.942	0.95
413_A	453_V	0.940	0.95
442_Y	445_A	0.940	0.95
185_G	190_G	0.938	0.95
358_S	384_Y	0.936	0.95
11_I	49_I	0.934	0.95
99_N	105_R	0.933	0.95
401_F	467_F	0.931	0.94
304_F	307_L	0.929	0.94
316_Y	348_M	0.921	0.94
8_A	77_E	0.920	0.94
183_F	247_A	0.918	0.94
57_S	62_F	0.918	0.94
13_E	45_M	0.915	0.94
444_G	448_I	0.914	0.94
285_I	289_I	0.912	0.94
92_V	96_S	0.911	0.94
156_L	159_M	0.908	0.94
175_I	239_I	0.906	0.94
237_L	286_T	0.905	0.94
174_L	192_V	0.899	0.93
435_I	447_A	0.899	0.93
176_G	239_I	0.895	0.93
310_L	412_L	0.895	0.93
249_I	253_L	0.894	0.93
35_L	62_F	0.893	0.93
106_A	109_T	0.889	0.93
402_P	405_I	0.889	0.93
365_F	461_T	0.889	0.93
358_S	453_V	0.888	0.93
356_Q	406_A	0.886	0.93
366_I	466_R	0.885	0.93
65_V	393_F	0.885	0.93
176_G	243_S	0.884	0.93
259_E	262_Q	0.881	0.93
288_A	291_N	0.880	0.93
364_M	376_S	0.880	0.93
282_I	286_T	0.879	0.93
113_I	240_L	0.874	0.92
369_D	373_K	0.872	0.92
141_F	154_A	0.872	0.92
422_V	449_G	0.869	0.92
462_Y	465_A	0.869	0.92
24_A	82_T	0.868	0.92
352_S	356_Q	0.866	0.92
359_A	402_P	0.866	0.92
205_A	220_W	0.866	0.92
194_G	270_T	0.865	0.92
412_L	416_Y	0.862	0.92
176_G	194_G	0.861	0.92
354_I	357_G	0.860	0.92
43_Q	55_S	0.859	0.92
10_Q	14_A	0.858	0.92
163_I	196_M	0.858	0.92
444_G	447_A	0.857	0.92
198_V	233_Q	0.857	0.92
10_Q	50_D	0.856	0.92
98_K	101_N	0.855	0.92
363_M	395_V	0.850	0.91
245_M	249_I	0.850	0.91
420_Q	452_I	0.849	0.91
363_M	376_S	0.848	0.91
364_M	373_K	0.847	0.91
15_V	62_F	0.844	0.91
309_G	313_G	0.844	0.91
383_A	388_T	0.844	0.91
318_A	403_F	0.840	0.91
254_T	266_V	0.837	0.91
453_V	457_P	0.837	0.91
372_Q	468_K	0.835	0.91
26_H	71_V	0.829	0.90
372_Q	395_V	0.827	0.90
47_D	398_R	0.826	0.90
257_T	261_I	0.823	0.90
97_E	105_R	0.822	0.90
207_G	210_A	0.822	0.90
98_K	102_P	0.821	0.90
6_K	50_D	0.814	0.89
309_G	348_M	0.812	0.89
313_G	414_G	0.812	0.89
138_G	142_S	0.811	0.89
402_P	461_T	0.811	0.89
184_G	190_G	0.811	0.89
165_G	199_H	0.810	0.89
173_A	194_G	0.810	0.89
355_A	359_A	0.807	0.89
45_M	49_I	0.803	0.89
337_G	340_L	0.802	0.89
174_L	195_V	0.801	0.89
222_L	280_I	0.799	0.89
241_L	282_I	0.799	0.89
314_G	407_M	0.796	0.88
277_A	282_I	0.796	0.88
43_Q	46_L	0.795	0.88
41_V	55_S	0.792	0.88
370_E	373_K	0.792	0.88
395_V	399_Y	0.789	0.88
11_I	14_A	0.787	0.88
454_L	457_P	0.787	0.88
9_R	18_A	0.781	0.87
351_L	413_A	0.781	0.87
232_Y	238_P	0.780	0.87
131_N	164_A	0.780	0.87
416_Y	419_S	0.780	0.87
103_L	106_A	0.778	0.87
124_A	166_T	0.777	0.87
95_A	98_K	0.776	0.87
451_A	455_I	0.774	0.87
44_E	48_Q	0.771	0.87
315_F	407_M	0.770	0.87
39_S	42_D	0.767	0.86
396_N	406_A	0.764	0.86
41_V	62_F	0.764	0.86
239_I	243_S	0.764	0.86
38_E	43_Q	0.764	0.86
356_Q	359_A	0.764	0.86
328_F	332_D	0.759	0.86
92_V	95_A	0.758	0.86
98_K	105_R	0.754	0.86
452_I	455_I	0.753	0.85
46_L	64_V	0.753	0.85
174_L	191_I	0.750	0.85
176_G	191_I	0.748	0.85
36_I	40_K	0.747	0.85
73_K	259_E	0.746	0.85
363_M	402_P	0.742	0.85
185_G	250_E	0.742	0.85
11_I	15_V	0.737	0.84
366_I	462_Y	0.734	0.84
314_G	404_I	0.732	0.84
167_A	174_L	0.731	0.84
361_L	458_F	0.730	0.84
345_L	349_L	0.729	0.84
258_P	261_I	0.727	0.83
375_L	379_S	0.726	0.83
401_F	466_R	0.725	0.83
192_V	196_M	0.725	0.83
261_I	385_L	0.723	0.83
334_Q	337_G	0.721	0.83
383_A	391_A	0.721	0.83
351_L	453_V	0.721	0.83
384_Y	432_V	0.715	0.82
19_E	36_I	0.714	0.82
356_Q	391_A	0.712	0.82
257_T	266_V	0.711	0.82
47_D	55_S	0.709	0.82
369_D	468_K	0.709	0.82
405_I	408_V	0.709	0.82
426_S	437_S	0.707	0.82
257_T	269_I	0.707	0.82
108_K	112_D	0.706	0.82
79_V	82_T	0.706	0.82
299_S	305_A	0.705	0.82
40_K	48_Q	0.703	0.81
221_N	226_E	0.703	0.81
12_V	15_V	0.702	0.81
109_T	244_Y	0.701	0.81
19_E	40_K	0.699	0.81
166_T	196_M	0.697	0.81
409_S	460_G	0.695	0.81
334_Q	339_K	0.695	0.81
388_T	391_A	0.695	0.81
5_N	73_K	0.694	0.81
249_I	270_T	0.693	0.80
162_L	199_H	0.693	0.80
290_G	324_M	0.692	0.80
404_I	407_M	0.692	0.80
113_I	183_F	0.689	0.80
189_L	246_L	0.688	0.80
7_S	74_V	0.685	0.80
177_W	181_K	0.682	0.79
7_S	70_T	0.682	0.79
137_E	140_F	0.680	0.79
464_Y	468_K	0.679	0.79
13_E	42_D	0.678	0.79
430_G	434_G	0.678	0.79
27_C	30_R	0.678	0.79
36_I	84_I	0.676	0.79
135_T	157_A	0.676	0.79
450_M	453_V	0.675	0.79
425_S	439_M	0.674	0.79
12_V	18_A	0.674	0.79
219_V	228_Q	0.673	0.78
15_V	21_I	0.671	0.78
125_G	129_G	0.670	0.78
255_K	368_K	0.670	0.78
310_L	313_G	0.669	0.78
76_A	79_V	0.669	0.78
190_G	243_S	0.669	0.78
412_L	415_M	0.668	0.78
351_L	410_S	0.667	0.78
317_S	403_F	0.666	0.78
155_D	221_N	0.666	0.78
25_T	60_G	0.666	0.78
107_V	397_L	0.666	0.78
28_V	430_G	0.664	0.78
47_D	54_G	0.663	0.77
365_F	457_P	0.662	0.77
451_A	459_A	0.662	0.77
203_L	207_G	0.662	0.77
356_Q	388_T	0.661	0.77
158_N	161_N	0.660	0.77
8_A	82_T	0.660	0.77
317_S	392_I	0.659	0.77
18_A	84_I	0.656	0.77
242_A	277_A	0.654	0.76
322_T	393_F	0.653	0.76
356_Q	383_A	0.652	0.76
126_L	129_G	0.652	0.76
33_F	62_F	0.650	0.76
398_R	402_P	0.649	0.76
133_I	136_A	0.645	0.75
243_S	246_L	0.645	0.75
363_M	372_Q	0.643	0.75
294_T	328_F	0.642	0.75
221_N	224_G	0.642	0.75
202_L	279_F	0.642	0.75
318_A	322_T	0.641	0.75
80_K	83_G	0.640	0.75
9_R	21_I	0.640	0.75
31_L	66_I	0.638	0.75
184_G	250_E	0.638	0.75
228_Q	287_F	0.637	0.75
113_I	179_A	0.636	0.74
312_Y	330_A	0.634	0.74
169_T	233_Q	0.634	0.74
35_L	57_S	0.633	0.74
312_Y	319_L	0.633	0.74
250_E	254_T	0.633	0.74
78_L	83_G	0.633	0.74
7_S	66_I	0.632	0.74
320_V	352_S	0.632	0.74
315_F	318_A	0.631	0.74
355_A	409_S	0.631	0.74
353_N	388_T	0.630	0.74
317_S	352_S	0.628	0.74
422_V	445_A	0.626	0.73
97_E	100_M	0.625	0.73
27_C	32_R	0.624	0.73
306_A	310_L	0.623	0.73
129_G	309_G	0.620	0.73
237_L	321_I	0.620	0.73
295_S	299_S	0.620	0.73
359_A	363_M	0.619	0.72
119_P	122_V	0.618	0.72
202_L	206_W	0.616	0.72
380_G	383_A	0.616	0.72
166_T	199_H	0.615	0.72
166_T	192_V	0.613	0.72
168_F	171_L	0.612	0.72
219_V	226_E	0.612	0.72
250_E	266_V	0.611	0.71
128_M	199_H	0.611	0.71
7_S	10_Q	0.611	0.71
88_T	93_K	0.610	0.71
345_L	426_S	0.610	0.71
376_S	380_G	0.609	0.71
175_I	179_A	0.609	0.71
163_I	274_T	0.608	0.71
180_V	246_L	0.608	0.71
232_Y	290_G	0.606	0.71
79_V	83_G	0.605	0.71
237_L	410_S	0.605	0.71
270_T	274_T	0.605	0.71
14_A	48_Q	0.604	0.71
133_I	139_I	0.604	0.71
317_S	356_Q	0.604	0.71
9_R	77_E	0.602	0.70
156_L	222_L	0.601	0.70
291_N	339_K	0.598	0.70
7_S	46_L	0.597	0.70
414_G	418_S	0.597	0.70
287_F	291_N	0.594	0.69
446_F	450_M	0.594	0.69
101_N	104_Q	0.594	0.69
40_K	46_L	0.593	0.69
38_E	41_V	0.593	0.69
273_L	276_F	0.592	0.69
314_G	317_S	0.592	0.69
54_G	322_T	0.592	0.69
14_A	41_V	0.592	0.69
154_A	158_N	0.592	0.69
420_Q	448_I	0.591	0.69
295_S	298_I	0.591	0.69
124_A	171_L	0.590	0.69
332_D	343_T	0.588	0.69
185_G	247_A	0.587	0.68
277_A	281_I	0.587	0.68
373_K	377_L	0.587	0.68
79_V	86_E	0.586	0.68
232_Y	283_G	0.585	0.68
343_T	347_P	0.585	0.68
445_A	452_I	0.583	0.68
128_M	169_T	0.583	0.68
155_D	220_W	0.583	0.68
410_S	414_G	0.582	0.68
354_I	431_G	0.581	0.68
435_I	450_M	0.581	0.68
462_Y	466_R	0.579	0.67
320_V	356_Q	0.578	0.67
353_N	406_A	0.578	0.67
406_A	456_V	0.578	0.67
365_F	462_Y	0.577	0.67
366_I	401_F	0.577	0.67
10_Q	52_V	0.576	0.67
14_A	44_E	0.574	0.67
396_N	403_F	0.574	0.67
47_D	53_K	0.573	0.67
360_A	364_M	0.570	0.66
118_L	386_G	0.569	0.66
421_G	441_Q	0.568	0.66
8_A	80_K	0.567	0.66
405_I	459_A	0.566	0.66
372_Q	376_S	0.566	0.66
303_S	307_L	0.566	0.66
408_V	411_G	0.565	0.66
362_A	461_T	0.564	0.65
242_A	274_T	0.563	0.65
158_N	162_L	0.563	0.65
7_S	14_A	0.562	0.65
300_V	311_L	0.562	0.65
121_I	326_H	0.561	0.65
177_W	192_V	0.560	0.65
34_A	60_G	0.558	0.65
409_S	412_L	0.558	0.65
25_T	28_V	0.558	0.65
312_Y	348_M	0.558	0.65
433_P	436_F	0.557	0.64
83_G	87_S	0.556	0.64
465_A	468_K	0.554	0.64
357_G	454_L	0.552	0.64
19_E	78_L	0.552	0.64
40_K	64_V	0.551	0.64
422_V	443_W	0.550	0.63
161_N	165_G	0.549	0.63
185_G	270_T	0.548	0.63
73_K	77_E	0.547	0.63
127_L	268_P	0.547	0.63
28_V	263_L	0.546	0.63
120_A	192_V	0.546	0.63
186_N	254_T	0.545	0.63
346_W	430_G	0.545	0.63
10_Q	80_K	0.545	0.63
354_I	454_L	0.543	0.63
128_M	168_F	0.542	0.62
363_M	399_Y	0.541	0.62
413_A	449_G	0.541	0.62
65_V	397_L	0.540	0.62
313_G	411_G	0.540	0.62
384_Y	454_L	0.539	0.62
138_G	141_F	0.539	0.62
245_M	248_K	0.538	0.62
353_N	380_G	0.537	0.62
41_V	64_V	0.537	0.62
184_G	243_S	0.537	0.62
333_L	337_G	0.536	0.62
87_S	96_S	0.536	0.62
352_S	410_S	0.536	0.62
187_P	243_S	0.535	0.61
65_V	322_T	0.535	0.61
48_Q	371_K	0.535	0.61
31_L	71_V	0.534	0.61
333_L	427_V	0.534	0.61
403_F	406_A	0.532	0.61
114_F	330_A	0.531	0.61
83_G	86_E	0.530	0.61
324_M	331_V	0.530	0.61
167_A	171_L	0.529	0.61
155_D	158_N	0.529	0.61
53_K	68_Q	0.529	0.61
18_A	81_E	0.528	0.60
263_L	266_V	0.528	0.60
296_G	300_V	0.527	0.60
246_L	274_T	0.527	0.60
241_L	244_Y	0.527	0.60
354_I	450_M	0.526	0.60
135_T	142_S	0.526	0.60
134_L	140_F	0.524	0.60
222_L	226_E	0.523	0.60
101_N	105_R	0.522	0.60
429_V	437_S	0.522	0.60
33_F	41_V	0.522	0.60
21_I	79_V	0.518	0.59
79_V	87_S	0.517	0.59
113_I	129_G	0.517	0.59
222_L	225_L	0.516	0.59
175_I	235_Q	0.514	0.58
359_A	461_T	0.514	0.58
352_S	388_T	0.514	0.58
11_I	74_V	0.513	0.58
167_A	192_V	0.513	0.58
25_T	61_Q	0.513	0.58
329_L	332_D	0.513	0.58
327_T	330_A	0.513	0.58
402_P	406_A	0.513	0.58
8_A	74_V	0.512	0.58
361_L	364_M	0.511	0.58
352_S	406_A	0.511	0.58
204_N	207_G	0.511	0.58
463_A	468_K	0.511	0.58
312_Y	328_F	0.511	0.58
360_A	396_N	0.509	0.58
46_L	54_G	0.509	0.58
123_T	268_P	0.509	0.58
169_T	200_P	0.508	0.57
53_K	66_I	0.508	0.57
285_I	288_A	0.507	0.57
352_S	430_G	0.507	0.57
382_S	391_A	0.506	0.57
363_M	466_R	0.504	0.57
357_G	380_G	0.504	0.57
25_T	64_V	0.503	0.57
92_V	97_E	0.503	0.57
317_S	388_T	0.503	0.57
238_P	283_G	0.502	0.57
366_I	468_K	0.502	0.57
450_M	454_L	0.501	0.56
360_A	376_S	0.501	0.56
15_V	49_I	0.500	0.56

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qnqA	2	0.783	100	0.654	Contact Map
3ipjA	1	0.1979	100	0.788	Contact Map
1ibaA	1	0.1638	100	0.792	Contact Map
3bp3A	1	0.1723	100	0.797	Contact Map
2h8eA	2	0.1851	63.2	0.97	Contact Map
4n8nA	1	0.1064	60.8	0.97	Contact Map
2wbmA	1	0.1872	44.2	0.973	Contact Map
1t95A	1	0.1957	34.7	0.975	Contact Map
3q9vA	1	0.1191	29.8	0.976	Contact Map
3u12A	2	0.1298	25.7	0.976	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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