CLPY - BACSU - GREMLIN Contacts

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CLPY - ATP-dependent protease ATPase subunit ClpY

UniProt:	P39778	Sequences: MEKKPLTPRQIVDRLDQYIVGQQNAKKAVAVALRNRYRRSLLDEKLKDEVVPKNILMMGPTGVGKTEIARRIAKLSGAPFIKIEATKFTEVGYVGRDVESMVRDLVETSVRLIKEEKMNEVKEQAEENANKRIVRLLVPGKKKQSGVKNPFEMFFGGSQPNGEDEAESQEEANIEEKRKRMAHQLALGELEDYYVTVEVEEQQPSMFDMLQGSGMEQMGMNMQDALSGLMPKKKKRRKMTVREARKVLTNEEASKLIDMDEVGQEAVQRAEESGIIFIDEIDKIAKNGGASSSADVSREGVQRDILPIVEGSTVVTKYGSVKTDHVLFIAAGAFHMAKPSDLIPELQGRFPIRVELNKLTVDDFVRILVEPDNALLKQYQALLQTEGISLEFSDEAIHKIAEVAYHVNQDTDNIGARRLHTILERLLEDLSFEAPDVTMEKITITPQYVEEKLGTIAKNKDLSQFIL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	467 (445)
Sequences:	913 (506)
Seq/√Len:	24.0

ECOLI - HSLU
BACSU - CLPY

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
399_K	450_E	6.782	1.00
239_M	247_V	5.618	1.00
102_V	276_I	5.429	1.00
116_E	269_R	5.265	1.00
42_L	50_V	5.122	1.00
133_I	195_V	5.113	1.00
101_M	276_I	4.848	1.00
366_R	370_E	4.437	1.00
360_T	363_D	4.138	1.00
136_L	195_V	4.019	1.00
191_E	245_R	4.010	1.00
24_N	357_N	3.929	1.00
361_V	402_E	3.904	1.00
399_K	402_E	3.903	1.00
117_K	120_E	3.750	1.00
361_V	398_H	3.482	1.00
309_V	350_F	3.468	1.00
130_N	186_A	3.397	1.00
183_H	187_L	3.344	1.00
117_K	265_E	3.289	1.00
365_V	398_H	3.237	1.00
184_Q	189_E	3.113	1.00
109_S	270_A	3.111	1.00
391_E	441_K	3.080	1.00
77_G	116_E	2.959	1.00
106_V	270_A	2.949	1.00
83_I	278_I	2.928	1.00
10_Q	13_D	2.926	1.00
365_V	397_I	2.902	1.00
14_R	17_Q	2.815	0.99
384_Q	389_S	2.771	0.99
133_I	245_R	2.584	0.99
53_K	424_E	2.556	0.99
16_D	23_Q	2.531	0.99
270_A	326_V	2.525	0.99
389_S	441_K	2.439	0.98
447_Q	450_E	2.359	0.98
37_Y	41_L	2.343	0.98
119_N	122_K	2.306	0.98
410_D	460_K	2.191	0.97
240_T	243_E	2.183	0.97
381_A	384_Q	2.090	0.95
313_T	320_S	2.034	0.95
131_K	182_A	2.032	0.95
106_V	267_V	2.028	0.95
265_E	268_Q	2.005	0.94
126_E	249_T	1.996	0.94
133_I	136_L	1.977	0.94
130_N	182_A	1.967	0.94
129_A	249_T	1.956	0.94
177_K	180_R	1.948	0.93
396_A	445_T	1.937	0.93
208_D	211_Q	1.932	0.93
395_E	446_P	1.909	0.93
403_V	422_I	1.892	0.92
258_D	261_E	1.855	0.92
424_E	434_A	1.855	0.92
390_L	444_I	1.810	0.91
106_V	321_V	1.751	0.89
181_M	184_Q	1.712	0.88
138_V	181_M	1.683	0.87
122_K	126_E	1.671	0.87
365_V	394_D	1.665	0.86
388_I	439_M	1.656	0.86
185_L	191_E	1.639	0.86
138_V	177_K	1.630	0.85
437_V	440_E	1.628	0.85
185_L	245_R	1.623	0.85
53_K	434_A	1.604	0.84
132_R	251_E	1.602	0.84
182_A	186_A	1.583	0.83
259_M	262_V	1.582	0.83
18_Y	373_N	1.574	0.83
111_R	305_I	1.570	0.83
106_V	318_Y	1.569	0.83
133_I	241_V	1.554	0.82
27_K	425_R	1.538	0.82
270_A	321_V	1.514	0.81
125_A	129_A	1.502	0.80
179_K	182_A	1.487	0.79
115_E	119_N	1.482	0.79
460_K	464_Q	1.465	0.78
28_A	133_I	1.446	0.77
177_K	181_M	1.442	0.77
129_A	253_A	1.439	0.77
44_E	47_K	1.428	0.76
245_R	249_T	1.410	0.75
268_Q	272_E	1.409	0.75
429_D	452_K	1.407	0.75
132_R	252_E	1.405	0.75
384_Q	387_G	1.403	0.75
9_R	436_D	1.395	0.75
430_L	444_I	1.392	0.75
213_S	221_N	1.391	0.74
47_K	272_E	1.388	0.74
220_M	223_Q	1.388	0.74
376_L	396_A	1.388	0.74
199_V	247_V	1.382	0.74
87_K	96_R	1.368	0.73
37_Y	305_I	1.361	0.73
424_E	431_S	1.357	0.73
42_L	45_K	1.356	0.73
107_E	318_Y	1.353	0.72
122_K	249_T	1.348	0.72
286_K	294_A	1.340	0.72
258_D	331_A	1.332	0.71
53_K	431_S	1.330	0.71
81_I	270_A	1.328	0.71
252_E	255_K	1.327	0.71
242_R	245_R	1.322	0.71
45_K	372_D	1.315	0.70
445_T	451_E	1.313	0.70
396_A	430_L	1.311	0.70
126_E	130_N	1.310	0.70
9_R	27_K	1.308	0.70
208_D	272_E	1.304	0.69
113_I	269_R	1.302	0.69
130_N	185_L	1.274	0.68
117_K	261_E	1.266	0.67
407_V	422_I	1.264	0.67
281_I	284_I	1.258	0.67
45_K	50_V	1.252	0.66
433_E	440_E	1.250	0.66
407_V	411_T	1.243	0.66
28_A	428_E	1.239	0.65
86_T	140_G	1.238	0.65
423_L	426_L	1.235	0.65
53_K	448_Y	1.217	0.64
239_M	243_E	1.215	0.64
180_R	184_Q	1.190	0.62
102_V	123_E	1.185	0.62
56_L	86_T	1.181	0.62
395_E	445_T	1.174	0.61
308_I	312_S	1.173	0.61
134_V	181_M	1.172	0.61
112_L	281_I	1.171	0.61
409_Q	412_D	1.168	0.61
112_L	312_S	1.167	0.61
48_D	74_K	1.163	0.60
217_Q	284_I	1.145	0.59
386_E	434_A	1.141	0.59
58_M	407_V	1.141	0.59
299_E	374_A	1.140	0.59
88_F	254_S	1.139	0.59
121_V	253_A	1.133	0.58
424_E	448_Y	1.128	0.58
266_A	325_H	1.127	0.58
224_D	227_S	1.126	0.58
312_S	343_I	1.115	0.57
177_K	193_Y	1.108	0.57
109_S	267_V	1.107	0.57
269_R	273_S	1.105	0.56
113_I	116_E	1.100	0.56
189_E	396_A	1.099	0.56
50_V	123_E	1.093	0.56
78_A	81_I	1.090	0.55
130_N	245_R	1.090	0.55
102_V	270_A	1.087	0.55
46_L	373_N	1.087	0.55
255_K	426_L	1.084	0.55
425_R	456_I	1.081	0.55
107_E	291_S	1.078	0.55
17_Q	374_A	1.076	0.54
447_Q	451_E	1.075	0.54
431_S	434_A	1.073	0.54
42_L	53_K	1.063	0.53
13_D	123_E	1.062	0.53
131_K	432_F	1.060	0.53
28_A	226_L	1.059	0.53
198_E	236_R	1.056	0.53
429_D	433_E	1.050	0.53
50_V	390_L	1.049	0.52
352_I	401_A	1.049	0.52
130_N	134_V	1.048	0.52
134_V	182_A	1.048	0.52
439_M	445_T	1.045	0.52
406_H	410_D	1.045	0.52
106_V	109_S	1.042	0.52
312_S	420_H	1.033	0.51
196_T	236_R	1.031	0.51
212_G	221_N	1.029	0.51
200_E	234_K	1.023	0.51
180_R	193_Y	1.022	0.51
262_V	374_A	1.022	0.51
17_Q	210_L	1.021	0.50
96_R	335_H	1.021	0.50
238_K	377_K	1.016	0.50
205_S	210_L	1.015	0.50
400_I	426_L	1.012	0.50
139_P	364_F	1.009	0.50
285_A	336_M	1.008	0.50
110_V	318_Y	1.005	0.49
377_K	380_Q	1.003	0.49
49_E	385_T	1.003	0.49
42_L	86_T	1.003	0.49
299_E	436_D	1.000	0.49
93_Y	178_R	0.993	0.49
291_S	294_A	0.989	0.48
17_Q	250_N	0.985	0.48
138_V	278_I	0.981	0.48
138_V	180_R	0.978	0.47
308_I	373_N	0.976	0.47
46_L	459_N	0.975	0.47
134_V	177_K	0.973	0.47
124_Q	128_N	0.972	0.47
136_L	197_V	0.970	0.47
267_V	352_I	0.965	0.47
391_E	443_T	0.958	0.46
72_I	325_H	0.957	0.46
312_S	371_P	0.953	0.46
42_L	424_E	0.950	0.45
125_A	256_L	0.949	0.45
96_R	99_E	0.949	0.45
135_R	177_K	0.948	0.45
47_K	374_A	0.947	0.45
23_Q	27_K	0.947	0.45
295_D	331_A	0.945	0.45
121_V	125_A	0.942	0.45
331_A	397_I	0.941	0.45
374_A	435_P	0.940	0.45
390_L	427_L	0.937	0.45
198_E	234_K	0.936	0.44
214_G	218_M	0.922	0.44
313_T	322_K	0.920	0.43
369_V	394_D	0.918	0.43
129_A	241_V	0.911	0.43
315_V	376_L	0.910	0.43
135_R	182_A	0.908	0.43
201_E	235_K	0.906	0.42
28_A	374_A	0.903	0.42
240_T	245_R	0.902	0.42
58_M	463_S	0.901	0.42
46_L	381_A	0.901	0.42
198_E	322_K	0.899	0.42
336_M	465_F	0.897	0.42
226_L	375_L	0.897	0.42
299_E	312_S	0.894	0.42
436_D	440_E	0.894	0.42
350_F	373_N	0.893	0.41
278_I	429_D	0.893	0.41
27_K	428_E	0.891	0.41
93_Y	298_R	0.888	0.41
205_S	209_M	0.888	0.41
384_Q	391_E	0.888	0.41
53_K	86_T	0.887	0.41
109_S	450_E	0.886	0.41
97_D	335_H	0.885	0.41
134_V	193_Y	0.883	0.41
19_I	29_V	0.882	0.41
195_V	241_V	0.881	0.41
195_V	248_L	0.880	0.41
53_K	385_T	0.880	0.41
86_T	424_E	0.877	0.40
231_P	256_L	0.876	0.40
118_M	254_S	0.874	0.40
14_R	364_F	0.874	0.40
136_L	331_A	0.872	0.40
433_E	452_K	0.871	0.40
456_I	463_S	0.870	0.40
388_I	438_T	0.869	0.40
195_V	263_G	0.868	0.40
45_K	445_T	0.868	0.40
31_V	256_L	0.866	0.40
403_V	457_A	0.861	0.39
431_S	448_Y	0.856	0.39
88_F	138_V	0.856	0.39
213_S	305_I	0.853	0.39
148_K	151_F	0.847	0.38
196_T	293_S	0.842	0.38
13_D	17_Q	0.838	0.38
9_R	433_E	0.836	0.38
463_S	466_I	0.834	0.37
366_R	371_P	0.834	0.37
181_M	193_Y	0.830	0.37
275_I	329_I	0.828	0.37
230_M	331_A	0.819	0.37
53_K	425_R	0.816	0.36
358_K	366_R	0.814	0.36
197_V	239_M	0.813	0.36
339_P	355_E	0.812	0.36
337_A	429_D	0.810	0.36
260_D	376_L	0.805	0.36
221_N	224_D	0.804	0.36
265_E	381_A	0.803	0.35
20_V	270_A	0.800	0.35
223_Q	453_L	0.797	0.35
299_E	400_I	0.795	0.35
122_K	173_N	0.793	0.35
386_E	440_E	0.791	0.35
402_E	406_H	0.789	0.35
184_Q	193_Y	0.788	0.34
20_V	40_S	0.784	0.34
56_L	197_V	0.783	0.34
42_L	390_L	0.783	0.34
27_K	109_S	0.782	0.34
364_F	374_A	0.782	0.34
376_L	397_I	0.781	0.34
117_K	259_M	0.778	0.34
53_K	411_T	0.777	0.34
177_K	305_I	0.775	0.34
330_A	461_D	0.770	0.33
106_V	120_E	0.768	0.33
86_T	242_R	0.767	0.33
426_L	453_L	0.767	0.33
201_E	233_K	0.767	0.33
212_G	331_A	0.767	0.33
138_V	270_A	0.766	0.33
234_K	321_V	0.762	0.33
446_P	450_E	0.762	0.33
24_N	31_V	0.760	0.33
97_D	103_R	0.759	0.33
106_V	110_V	0.758	0.33
178_R	296_V	0.758	0.33
118_M	261_E	0.757	0.33
200_E	251_E	0.756	0.32
86_T	180_R	0.751	0.32
284_I	315_V	0.748	0.32
186_A	217_Q	0.746	0.32
114_K	259_M	0.746	0.32
101_M	308_I	0.745	0.32
358_K	413_N	0.745	0.32
399_K	446_P	0.742	0.32
371_P	466_I	0.741	0.32
376_L	380_Q	0.741	0.32
374_A	377_K	0.741	0.32
246_K	261_E	0.739	0.31
44_E	109_S	0.739	0.31
117_K	331_A	0.738	0.31
208_D	217_Q	0.737	0.31
41_L	117_K	0.737	0.31
88_F	219_G	0.736	0.31
210_L	213_S	0.735	0.31
199_V	272_E	0.735	0.31
385_T	424_E	0.734	0.31
298_R	364_F	0.733	0.31
140_G	305_I	0.731	0.31
231_P	308_I	0.731	0.31
285_A	335_H	0.727	0.31
129_A	245_R	0.725	0.31
374_A	466_I	0.725	0.31
60_P	86_T	0.722	0.30
414_I	421_T	0.722	0.30
86_T	142_K	0.721	0.30
106_V	352_I	0.721	0.30
278_I	362_D	0.720	0.30
225_A	358_K	0.720	0.30
17_Q	288_G	0.719	0.30
276_I	308_I	0.718	0.30
93_Y	296_V	0.718	0.30
407_V	463_S	0.714	0.30
438_T	447_Q	0.713	0.30
136_L	241_V	0.713	0.30
191_E	200_E	0.709	0.30
56_L	135_R	0.708	0.30
413_N	462_L	0.708	0.30
207_F	211_Q	0.705	0.29
329_I	400_I	0.705	0.29
204_P	240_T	0.704	0.29
77_G	295_D	0.700	0.29
27_K	450_E	0.699	0.29
74_K	271_E	0.699	0.29
214_G	226_L	0.699	0.29
51_V	261_E	0.698	0.29
129_A	318_Y	0.697	0.29
388_I	437_V	0.695	0.29
56_L	253_A	0.692	0.29
50_V	385_T	0.692	0.29
101_M	231_P	0.689	0.28
20_V	106_V	0.687	0.28
134_V	179_K	0.686	0.28
350_F	366_R	0.686	0.28
185_L	426_L	0.685	0.28
20_V	358_K	0.683	0.28
10_Q	119_N	0.681	0.28
294_A	336_M	0.681	0.28
45_K	371_P	0.681	0.28
102_V	106_V	0.680	0.28
49_E	101_M	0.680	0.28
220_M	284_I	0.680	0.28
191_E	305_I	0.680	0.28
257_I	262_V	0.678	0.28
330_A	452_K	0.677	0.28
371_P	463_S	0.677	0.28
215_M	222_M	0.676	0.28
136_L	222_M	0.676	0.28
259_M	263_G	0.675	0.28
81_I	312_S	0.673	0.28
81_I	108_T	0.673	0.28
390_L	430_L	0.673	0.28
74_K	315_V	0.673	0.28
48_D	269_R	0.673	0.28
28_A	352_I	0.672	0.27
309_V	384_Q	0.672	0.27
185_L	403_V	0.671	0.27
380_Q	391_E	0.670	0.27
50_V	429_D	0.669	0.27
10_Q	186_A	0.666	0.27
285_A	305_I	0.666	0.27
339_P	353_R	0.665	0.27
189_E	245_R	0.664	0.27
194_Y	238_K	0.664	0.27
177_K	325_H	0.663	0.27
411_T	424_E	0.663	0.27
86_T	108_T	0.663	0.27
112_L	371_P	0.662	0.27
211_Q	299_E	0.662	0.27
185_L	190_L	0.662	0.27
371_P	436_D	0.661	0.27
270_A	325_H	0.660	0.27
81_I	465_F	0.660	0.27
48_D	278_I	0.659	0.27
230_M	234_K	0.654	0.26
257_I	312_S	0.653	0.26
128_N	131_K	0.652	0.26
144_Q	241_V	0.652	0.26
337_A	409_Q	0.650	0.26
407_V	456_I	0.649	0.26
299_E	371_P	0.648	0.26
78_A	223_Q	0.648	0.26
220_M	227_S	0.648	0.26
23_Q	384_Q	0.648	0.26
28_A	278_I	0.648	0.26
232_K	270_A	0.647	0.26
339_P	407_V	0.647	0.26
172_A	176_E	0.646	0.26
226_L	284_I	0.645	0.26
312_S	350_F	0.643	0.26
425_R	428_E	0.642	0.26
86_T	111_R	0.642	0.26
18_Y	374_A	0.641	0.26
383_L	403_V	0.641	0.26
362_D	398_H	0.641	0.26
51_V	285_A	0.640	0.26
184_Q	195_V	0.639	0.26
358_K	412_D	0.637	0.26
284_I	326_V	0.637	0.26
180_R	189_E	0.637	0.26
58_M	339_P	0.636	0.25
106_V	465_F	0.635	0.25
403_V	426_L	0.635	0.25
147_V	150_P	0.633	0.25
427_L	465_F	0.632	0.25
357_N	452_K	0.632	0.25
114_K	221_N	0.631	0.25
87_K	104_D	0.631	0.25
242_R	442_I	0.630	0.25
330_A	350_F	0.629	0.25
291_S	413_N	0.629	0.25
194_Y	258_D	0.628	0.25
210_L	221_N	0.627	0.25
218_M	284_I	0.624	0.25
284_I	289_G	0.622	0.25
215_M	233_K	0.622	0.25
281_I	369_V	0.622	0.25
371_P	374_A	0.622	0.25
200_E	444_I	0.622	0.25
96_R	427_L	0.621	0.25
23_Q	43_D	0.621	0.25
44_E	262_V	0.621	0.25
129_A	375_L	0.619	0.25
400_I	405_Y	0.618	0.25
393_S	443_T	0.616	0.24
254_S	271_E	0.616	0.24
44_E	397_I	0.616	0.24
131_K	440_E	0.615	0.24
120_E	444_I	0.614	0.24
132_R	255_K	0.614	0.24
173_N	176_E	0.613	0.24
362_D	365_V	0.613	0.24
386_E	436_D	0.613	0.24
179_K	187_L	0.613	0.24
241_V	246_K	0.611	0.24
229_L	237_R	0.611	0.24
134_V	138_V	0.610	0.24
17_Q	196_T	0.610	0.24
20_V	437_V	0.609	0.24
23_Q	248_L	0.609	0.24
48_D	99_E	0.609	0.24
355_E	407_V	0.609	0.24
209_M	216_E	0.608	0.24
184_Q	374_A	0.607	0.24
111_R	177_K	0.607	0.24
112_L	295_D	0.607	0.24
335_H	427_L	0.607	0.24
276_I	321_V	0.604	0.24
383_L	427_L	0.604	0.24
19_I	453_L	0.603	0.24
386_E	439_M	0.603	0.24
20_V	406_H	0.602	0.24
312_S	466_I	0.600	0.24
37_Y	40_S	0.599	0.24
254_S	263_G	0.599	0.24
99_E	136_L	0.598	0.23
78_A	273_S	0.598	0.23
431_S	437_V	0.598	0.23
138_V	376_L	0.597	0.23
202_Q	357_N	0.597	0.23
24_N	284_I	0.596	0.23
48_D	396_A	0.596	0.23
270_A	320_S	0.594	0.23
40_S	56_L	0.593	0.23
29_V	68_I	0.593	0.23
63_V	379_Y	0.592	0.23
238_K	292_S	0.592	0.23
68_I	356_L	0.591	0.23
285_A	308_I	0.591	0.23
375_L	423_L	0.590	0.23
380_Q	389_S	0.590	0.23
129_A	191_E	0.590	0.23
45_K	466_I	0.588	0.23
77_G	432_F	0.586	0.23
108_T	420_H	0.586	0.23
398_H	446_P	0.586	0.23
37_Y	134_V	0.585	0.23
453_L	467_L	0.585	0.23
211_Q	217_Q	0.585	0.23
7_T	109_S	0.584	0.23
146_G	215_M	0.582	0.23
196_T	382_L	0.582	0.23
220_M	396_A	0.581	0.23
136_L	269_R	0.581	0.23
398_H	445_T	0.580	0.23
18_Y	233_K	0.580	0.23
259_M	308_I	0.579	0.23
178_R	298_R	0.579	0.23
130_N	179_K	0.578	0.22
229_L	412_D	0.578	0.22
271_E	407_V	0.578	0.22
321_V	326_V	0.577	0.22
88_F	313_T	0.577	0.22
86_T	224_D	0.577	0.22
403_V	454_G	0.576	0.22
37_Y	57_M	0.575	0.22
195_V	242_R	0.575	0.22
57_M	130_N	0.575	0.22
56_L	264_Q	0.575	0.22
56_L	136_L	0.574	0.22
111_R	308_I	0.574	0.22
370_E	436_D	0.572	0.22
397_I	445_T	0.571	0.22
383_L	434_A	0.571	0.22
101_M	111_R	0.569	0.22
94_V	412_D	0.569	0.22
27_K	399_K	0.569	0.22
433_E	437_V	0.568	0.22
107_E	262_V	0.568	0.22
86_T	431_S	0.568	0.22
60_P	296_V	0.568	0.22
37_Y	76_S	0.568	0.22
134_V	185_L	0.567	0.22
41_L	272_E	0.567	0.22
46_L	137_L	0.566	0.22
78_A	86_T	0.565	0.22
5_P	436_D	0.565	0.22
10_Q	464_Q	0.564	0.22
340_S	370_E	0.564	0.22
289_G	294_A	0.564	0.22
51_V	263_G	0.563	0.22
339_P	352_I	0.563	0.22
288_G	451_E	0.562	0.22
337_A	369_V	0.562	0.22
81_I	276_I	0.561	0.22
221_N	426_L	0.561	0.22
305_I	396_A	0.561	0.22
114_K	140_G	0.559	0.22
353_R	463_S	0.558	0.22
254_S	261_E	0.558	0.22
208_D	248_L	0.557	0.21
402_E	450_E	0.556	0.21
128_N	255_K	0.556	0.21
216_E	426_L	0.555	0.21
50_V	361_V	0.555	0.21
262_V	291_S	0.554	0.21
364_F	413_N	0.554	0.21
360_T	366_R	0.554	0.21
175_E	459_N	0.554	0.21
14_R	47_K	0.553	0.21
313_T	324_D	0.553	0.21
191_E	458_K	0.553	0.21
339_P	411_T	0.552	0.21
379_Y	453_L	0.551	0.21
411_T	464_Q	0.550	0.21
99_E	312_S	0.550	0.21
33_L	76_S	0.548	0.21
388_I	440_E	0.548	0.21
41_L	411_T	0.547	0.21
142_K	314_V	0.547	0.21
57_M	239_M	0.546	0.21
400_I	429_D	0.546	0.21
176_E	180_R	0.545	0.21
14_R	252_E	0.542	0.21
74_K	130_N	0.541	0.21
124_Q	246_K	0.539	0.21
343_I	457_A	0.539	0.21
318_Y	322_K	0.538	0.21
31_V	352_I	0.538	0.21
37_Y	127_E	0.537	0.21
46_L	72_I	0.537	0.21
78_A	108_T	0.537	0.21
177_K	184_Q	0.536	0.20
118_M	121_V	0.536	0.20
20_V	183_H	0.536	0.20
411_T	422_I	0.535	0.20
86_T	428_E	0.535	0.20
77_G	149_N	0.535	0.20
179_K	361_V	0.534	0.20
285_A	427_L	0.534	0.20
288_G	292_S	0.533	0.20
88_F	101_M	0.532	0.20
238_K	246_K	0.531	0.20
305_I	448_Y	0.530	0.20
49_E	60_P	0.529	0.20
173_N	251_E	0.529	0.20
293_S	422_I	0.527	0.20
231_P	435_P	0.527	0.20
388_I	399_K	0.526	0.20
97_D	465_F	0.525	0.20
75_L	214_G	0.524	0.20
201_E	380_Q	0.524	0.20
56_L	219_G	0.522	0.20
263_G	267_V	0.522	0.20
20_V	360_T	0.521	0.20
109_S	194_Y	0.520	0.20
106_V	243_E	0.519	0.20
369_V	374_A	0.519	0.20
42_L	88_F	0.519	0.20
362_D	402_E	0.518	0.20
219_G	360_T	0.518	0.20
122_K	278_I	0.518	0.20
31_V	236_R	0.518	0.20
324_D	401_A	0.517	0.20
241_V	245_R	0.517	0.20
185_L	352_I	0.517	0.20
27_K	373_N	0.516	0.20
143_K	147_V	0.515	0.20
192_D	200_E	0.515	0.20
308_I	350_F	0.514	0.19
58_M	466_I	0.514	0.19
42_L	371_P	0.513	0.19
194_Y	263_G	0.512	0.19
383_L	395_E	0.511	0.19
211_Q	219_G	0.511	0.19
41_L	305_I	0.511	0.19
440_E	445_T	0.510	0.19
48_D	116_E	0.509	0.19
135_R	423_L	0.509	0.19
126_E	321_V	0.508	0.19
357_N	451_E	0.508	0.19
289_G	441_K	0.508	0.19
170_E	400_I	0.508	0.19
23_Q	432_F	0.508	0.19
330_A	453_L	0.508	0.19
96_R	104_D	0.508	0.19
331_A	344_P	0.507	0.19
278_I	366_R	0.507	0.19
173_N	428_E	0.507	0.19
305_I	343_I	0.506	0.19
184_Q	393_S	0.506	0.19
325_H	339_P	0.505	0.19
213_S	321_V	0.505	0.19
228_G	444_I	0.505	0.19
19_I	49_E	0.505	0.19
41_L	47_K	0.505	0.19
386_E	396_A	0.504	0.19
44_E	264_Q	0.504	0.19
19_I	344_P	0.501	0.19
181_M	305_I	0.500	0.19
340_S	388_I	0.500	0.19

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1g41A	3	0.7152	100	0.657	Contact Map
1ofhA	3	0.6617	100	0.783	Contact Map
1um8A	1	0.5867	100	0.844	Contact Map
3hwsA	3	0.636	100	0.859	Contact Map
1r6bX	1	0.5931	100	0.878	Contact Map
3pxiA	3	0.5439	99.9	0.891	Contact Map
4ww4B	2	0.8051	99.9	0.895	Contact Map
1qvrA	3	0.561	99.9	0.902	Contact Map
4ciuA	1	0.5739	99.9	0.903	Contact Map
4d2uA	3	0.5739	99.9	0.905	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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