YWDJ - BACSU - GREMLIN Contacts

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YWDJ - Putative purine permease YwdJ

UniProt:	P39618	Sequences: MKLVLGALQWTAFIIAAAIVVPVAVAQSFHLDHSDSARLIQSTFFVLGIAAVIQCLKGHRLPINESPAGLWWGVYTIYAGLTGTVFATYGDTLRGLQGALLVSAVCFFLLSVFKVIDRLAKLFTPVVTGVYLLLLVMQLSQPIIKGILGIGYRQDGVDGLVFGLALVVIAAAFIMTNSNIMFFKQYSILLALFGGWVLFAAAGAAKPIEMPDRLFQLPSLFPFGTPLFNSGLIITSIFITILLIVNMLASMKVVDIAMKKFSKQPDGKHHERHAGFAASFSHLLSGLTGAIAPVPISGAAGFIETTKMPSKKPFMLGSILVIVISVIPFFMNTFASLPSPVGFAVNFVVFSAMGGLAFAEFDSYEKEESKRVRSIIGISLLTGVGIMFVPETALKGLHPVFISLLSNGLVLGTLAAIAADQFQLWRRRKSDNLVSTENKH	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	440 (391)
Sequences:	4272 (2177)
Seq/√Len:	110.1

ECOLI - UACT XANQ YBBY XANP URAA RUTG
BACSU - YWDJ PBUX PUCJ PUCK PYRP

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
171_A	194_G	5.142	1.00
167_V	198_L	5.032	1.00
101_L	286_G	4.734	1.00
147_I	165_A	4.134	1.00
134_L	412_G	4.083	1.00
172_A	191_A	3.682	1.00
214_L	329_F	3.603	1.00
45_F	325_S	3.563	1.00
197_V	201_A	3.516	1.00
106_C	237_I	3.391	1.00
208_I	211_P	3.170	1.00
175_M	190_L	3.135	1.00
94_R	227_L	3.006	1.00
382_T	415_A	3.003	1.00
95_G	227_L	2.937	1.00
164_L	199_F	2.913	1.00
207_P	210_M	2.800	1.00
48_G	322_I	2.763	1.00
98_G	228_F	2.687	1.00
164_L	204_A	2.683	1.00
167_V	194_G	2.662	1.00
379_S	416_A	2.648	1.00
371_R	424_L	2.613	1.00
221_F	287_L	2.583	1.00
169_I	348_V	2.516	1.00
50_A	281_S	2.359	1.00
7_A	316_L	2.358	1.00
251_M	274_A	2.348	1.00
212_D	329_F	2.343	1.00
101_L	283_L	2.342	1.00
11_T	320_L	2.323	1.00
164_L	202_A	2.288	1.00
167_V	171_A	2.230	1.00
4_V	320_L	2.211	1.00
102_V	233_I	2.179	1.00
193_F	197_V	2.135	1.00
60_R	268_K	2.135	1.00
171_A	175_M	2.104	1.00
255_D	266_D	2.101	1.00
46_V	288_T	2.095	1.00
52_V	318_S	2.054	1.00
256_I	363_S	2.047	1.00
122_L	421_Q	2.021	1.00
163_G	167_V	2.005	1.00
197_V	200_A	2.001	1.00
108_F	283_L	1.983	1.00
52_V	315_M	1.966	1.00
171_A	198_L	1.956	1.00
25_V	75_Y	1.954	1.00
108_F	276_F	1.946	1.00
55_C	315_M	1.942	1.00
209_E	336_S	1.940	1.00
308_M	313_P	1.940	1.00
111_S	276_F	1.926	1.00
160_L	204_A	1.922	1.00
210_M	333_T	1.903	1.00
212_D	332_N	1.894	1.00
172_A	345_V	1.890	1.00
45_F	322_I	1.866	1.00
105_V	109_L	1.859	1.00
92_T	95_G	1.842	1.00
196_W	336_S	1.788	1.00
418_A	422_F	1.770	1.00
319_I	323_V	1.766	1.00
3_L	316_L	1.764	1.00
264_Q	267_G	1.764	1.00
100_L	286_G	1.762	1.00
104_A	283_L	1.757	1.00
137_M	354_G	1.753	1.00
159_G	163_G	1.741	1.00
108_F	279_S	1.722	1.00
124_T	420_D	1.720	1.00
174_I	178_S	1.718	1.00
110_L	244_I	1.708	1.00
146_G	339_S	1.690	1.00
105_V	283_L	1.652	1.00
175_M	179_N	1.640	1.00
75_Y	96_L	1.622	1.00
11_T	317_G	1.607	1.00
267_G	270_H	1.597	1.00
198_L	202_A	1.597	1.00
264_Q	270_H	1.594	1.00
26_A	31_L	1.594	1.00
201_A	204_A	1.584	1.00
47_L	64_N	1.536	1.00
196_W	205_A	1.515	1.00
379_S	415_A	1.512	1.00
163_G	166_L	1.494	1.00
270_H	273_H	1.493	1.00
99_A	103_S	1.480	1.00
76_T	79_A	1.477	1.00
126_V	376_I	1.471	1.00
182_F	186_Y	1.459	1.00
183_F	190_L	1.455	1.00
169_I	378_I	1.449	1.00
91_D	229_N	1.438	1.00
195_G	341_V	1.428	1.00
179_N	183_F	1.426	1.00
220_L	287_L	1.425	1.00
229_N	232_L	1.424	1.00
57_K	280_F	1.416	1.00
108_F	280_F	1.414	1.00
375_I	419_A	1.411	1.00
166_L	170_A	1.398	1.00
95_G	229_N	1.396	1.00
52_V	55_C	1.386	1.00
150_I	157_V	1.370	1.00
220_L	289_G	1.369	1.00
160_L	202_A	1.366	1.00
382_T	411_L	1.354	1.00
14_I	18_A	1.353	1.00
10_W	299_A	1.331	1.00
72_W	76_T	1.328	1.00
78_Y	232_L	1.314	0.99
170_A	174_I	1.312	0.99
101_L	226_P	1.312	0.99
198_L	201_A	1.309	0.99
49_I	322_I	1.300	0.99
52_V	322_I	1.297	0.99
329_F	332_N	1.297	0.99
222_P	289_G	1.287	0.99
402_I	406_S	1.287	0.99
303_I	309_P	1.272	0.99
221_F	226_P	1.270	0.99
51_A	64_N	1.264	0.99
200_A	207_P	1.260	0.99
190_L	194_G	1.252	0.99
91_D	232_L	1.249	0.99
56_L	315_M	1.240	0.99
186_Y	190_L	1.227	0.99
254_V	303_I	1.215	0.99
45_F	288_T	1.209	0.99
179_N	184_K	1.209	0.99
228_F	233_I	1.206	0.99
96_L	99_A	1.203	0.99
194_G	198_L	1.203	0.99
414_L	418_A	1.198	0.99
250_S	297_S	1.198	0.99
378_I	415_A	1.190	0.99
55_C	314_F	1.185	0.99
230_S	233_I	1.184	0.99
34_S	41_Q	1.180	0.99
107_F	111_S	1.174	0.99
148_L	156_G	1.166	0.99
63_I	254_V	1.156	0.99
163_G	202_A	1.151	0.99
216_Q	328_P	1.140	0.99
134_L	383_G	1.139	0.98
79_A	96_L	1.136	0.98
111_S	114_K	1.128	0.98
155_D	158_D	1.118	0.98
68_A	243_L	1.115	0.98
327_I	331_M	1.103	0.98
380_L	384_V	1.101	0.98
144_I	385_G	1.099	0.98
221_F	224_G	1.091	0.98
126_V	130_V	1.087	0.98
94_R	97_Q	1.083	0.98
246_N	294_V	1.080	0.98
99_A	107_F	1.078	0.98
66_S	296_I	1.066	0.98
401_F	404_L	1.059	0.98
70_L	243_L	1.059	0.98
49_I	53_I	1.058	0.98
104_A	282_H	1.050	0.97
104_A	279_S	1.050	0.97
323_V	327_I	1.037	0.97
65_E	295_P	1.034	0.97
250_S	300_A	1.028	0.97
160_L	163_G	1.027	0.97
174_I	422_F	1.024	0.97
149_G	157_V	1.022	0.97
251_M	278_A	1.015	0.97
285_S	293_P	1.011	0.97
78_Y	236_S	1.010	0.97
13_F	302_F	1.008	0.97
247_M	251_M	1.007	0.97
107_F	243_L	1.007	0.97
399_P	402_I	1.006	0.97
101_L	287_L	0.997	0.97
74_V	239_I	0.991	0.96
103_S	240_T	0.987	0.96
33_H	40_I	0.986	0.96
64_N	317_G	0.982	0.96
49_I	284_L	0.982	0.96
312_K	315_M	0.974	0.96
359_A	363_S	0.974	0.96
133_L	380_L	0.972	0.96
199_F	203_G	0.971	0.96
401_F	405_L	0.966	0.96
81_L	91_D	0.961	0.96
258_M	265_P	0.957	0.96
21_V	69_G	0.948	0.95
52_V	319_I	0.943	0.95
258_M	309_P	0.940	0.95
217_L	326_V	0.940	0.95
91_D	95_G	0.937	0.95
111_S	272_R	0.929	0.95
160_L	164_L	0.927	0.95
374_S	378_I	0.926	0.95
284_L	288_T	0.921	0.95
98_G	102_V	0.920	0.95
200_A	205_A	0.917	0.94
54_Q	58_G	0.916	0.94
180_I	184_K	0.913	0.94
247_M	274_A	0.911	0.94
10_W	13_F	0.904	0.94
140_S	381_L	0.899	0.94
167_V	202_A	0.896	0.94
354_G	380_L	0.894	0.94
77_I	80_G	0.893	0.94
161_V	340_P	0.890	0.93
158_D	161_V	0.884	0.93
95_G	98_G	0.882	0.93
54_Q	61_L	0.881	0.93
63_I	295_P	0.878	0.93
164_L	198_L	0.878	0.93
189_L	193_F	0.875	0.93
170_A	173_F	0.872	0.93
77_I	81_L	0.869	0.93
171_A	191_A	0.866	0.93
364_Y	372_V	0.864	0.92
214_L	327_I	0.862	0.92
231_G	235_T	0.862	0.92
94_R	98_G	0.861	0.92
371_R	375_I	0.861	0.92
315_M	318_S	0.850	0.92
390_P	405_L	0.850	0.92
169_I	173_F	0.848	0.92
206_K	209_E	0.846	0.92
23_V	40_I	0.845	0.92
64_N	314_F	0.842	0.91
199_F	204_A	0.842	0.91
10_W	14_I	0.841	0.91
4_V	316_L	0.840	0.91
99_A	104_A	0.840	0.91
92_T	99_A	0.840	0.91
138_Q	409_L	0.838	0.91
17_A	298_G	0.837	0.91
133_L	358_F	0.836	0.91
213_R	216_Q	0.830	0.91
196_W	207_P	0.829	0.91
123_F	413_T	0.829	0.91
48_G	318_S	0.827	0.91
72_W	241_I	0.826	0.91
92_T	103_S	0.825	0.91
117_D	272_R	0.823	0.91
348_V	374_S	0.822	0.90
210_M	336_S	0.822	0.90
355_G	373_R	0.821	0.90
241_I	253_V	0.820	0.90
132_L	250_S	0.813	0.90
100_L	107_F	0.812	0.90
196_W	337_L	0.810	0.90
6_G	10_W	0.809	0.90
17_A	350_F	0.809	0.90
248_L	271_E	0.808	0.90
68_A	294_V	0.807	0.90
105_V	108_F	0.805	0.90
70_L	349_V	0.805	0.90
103_S	111_S	0.802	0.89
146_G	350_F	0.800	0.89
103_S	107_F	0.799	0.89
8_L	320_L	0.799	0.89
101_L	228_F	0.797	0.89
55_C	311_K	0.797	0.89
96_L	100_L	0.795	0.89
247_M	278_A	0.793	0.89
97_Q	101_L	0.786	0.88
149_G	155_D	0.783	0.88
43_T	291_I	0.783	0.88
101_L	105_V	0.778	0.88
355_G	376_I	0.772	0.88
243_L	294_V	0.772	0.88
315_M	319_I	0.771	0.87
330_F	333_T	0.771	0.87
324_I	330_F	0.768	0.87
95_G	99_A	0.768	0.87
46_V	290_A	0.768	0.87
247_M	294_V	0.765	0.87
23_V	342_G	0.765	0.87
11_T	324_I	0.764	0.87
122_L	417_I	0.760	0.87
21_V	67_P	0.756	0.86
42_S	45_F	0.756	0.86
63_I	251_M	0.756	0.86
143_I	168_V	0.756	0.86
63_I	302_F	0.754	0.86
197_V	323_V	0.752	0.86
382_T	386_I	0.749	0.86
300_A	303_I	0.747	0.86
164_L	340_P	0.743	0.85
46_V	284_L	0.742	0.85
148_L	162_F	0.740	0.85
130_V	379_S	0.739	0.85
4_V	8_L	0.738	0.85
18_A	47_L	0.738	0.85
175_M	191_A	0.737	0.85
57_K	277_A	0.737	0.85
241_I	245_V	0.736	0.85
269_H	273_H	0.730	0.84
230_S	234_I	0.729	0.84
175_M	183_F	0.729	0.84
375_I	379_S	0.728	0.84
378_I	419_A	0.726	0.84
280_F	284_L	0.726	0.84
237_I	240_T	0.725	0.84
166_L	202_A	0.723	0.84
67_P	71_W	0.722	0.84
188_I	302_F	0.719	0.84
156_G	159_G	0.719	0.84
177_N	355_G	0.718	0.83
217_L	325_S	0.716	0.83
126_V	372_V	0.716	0.83
145_K	148_L	0.715	0.83
14_I	299_A	0.713	0.83
175_M	194_G	0.711	0.83
111_S	279_S	0.711	0.83
361_F	364_Y	0.710	0.83
92_T	100_L	0.709	0.83
146_G	342_G	0.708	0.83
282_H	293_P	0.708	0.83
20_V	146_G	0.707	0.83
386_I	411_L	0.707	0.83
192_L	345_V	0.705	0.82
104_A	111_S	0.703	0.82
383_G	412_G	0.701	0.82
207_P	336_S	0.700	0.82
92_T	96_L	0.700	0.82
62_P	314_F	0.700	0.82
367_E	372_V	0.699	0.82
93_L	97_Q	0.698	0.82
97_Q	103_S	0.694	0.81
306_T	320_L	0.693	0.81
223_F	226_P	0.692	0.81
191_A	194_G	0.688	0.81
53_I	57_K	0.685	0.81
100_L	104_A	0.681	0.80
202_A	330_F	0.678	0.80
132_L	135_L	0.678	0.80
43_T	47_L	0.677	0.80
133_L	361_F	0.676	0.80
42_S	46_V	0.674	0.79
199_F	202_A	0.674	0.79
91_D	227_L	0.673	0.79
7_A	317_G	0.672	0.79
46_V	285_S	0.672	0.79
351_S	355_G	0.670	0.79
162_F	166_L	0.670	0.79
259_K	309_P	0.670	0.79
97_Q	100_L	0.670	0.79
190_L	193_F	0.669	0.79
143_I	165_A	0.667	0.79
14_I	64_N	0.666	0.79
377_G	381_L	0.666	0.79
183_F	187_S	0.666	0.79
107_F	279_S	0.665	0.79
23_V	26_A	0.664	0.78
43_T	67_P	0.664	0.78
94_R	224_G	0.661	0.78
214_L	218_P	0.658	0.78
257_A	304_E	0.657	0.78
107_F	240_T	0.656	0.78
65_E	247_M	0.656	0.78
16_A	22_P	0.653	0.77
18_A	43_T	0.650	0.77
76_T	80_G	0.650	0.77
254_V	300_A	0.649	0.77
131_Y	169_I	0.649	0.77
150_I	156_G	0.648	0.77
98_G	226_P	0.647	0.77
73_G	77_I	0.647	0.77
10_W	302_F	0.647	0.77
246_N	278_A	0.642	0.76
193_F	333_T	0.641	0.76
148_L	157_V	0.641	0.76
177_N	353_M	0.640	0.76
149_G	156_G	0.638	0.76
381_L	384_V	0.638	0.76
175_M	187_S	0.638	0.76
70_L	135_L	0.637	0.76
172_A	348_V	0.637	0.76
266_D	270_H	0.637	0.76
376_I	380_L	0.636	0.75
53_I	277_A	0.636	0.75
118_R	122_L	0.636	0.75
79_A	93_L	0.635	0.75
73_G	76_T	0.635	0.75
362_D	366_K	0.635	0.75
362_D	367_E	0.634	0.75
194_G	197_V	0.634	0.75
383_G	408_G	0.632	0.75
167_V	201_A	0.631	0.75
304_E	359_A	0.630	0.75
254_V	295_P	0.630	0.75
283_L	287_L	0.629	0.75
332_N	336_S	0.628	0.74
215_F	327_I	0.628	0.74
95_G	232_L	0.628	0.74
18_A	321_V	0.623	0.74
192_L	245_V	0.623	0.74
179_N	182_F	0.622	0.74
124_T	301_G	0.622	0.74
70_L	294_V	0.622	0.74
25_V	192_L	0.622	0.74
176_T	305_T	0.621	0.74
18_A	21_V	0.621	0.74
243_L	246_N	0.619	0.73
249_A	383_G	0.618	0.73
172_A	358_F	0.617	0.73
225_T	287_L	0.615	0.73
68_A	71_W	0.613	0.73
8_L	148_L	0.612	0.73
176_T	374_S	0.612	0.73
412_G	416_A	0.611	0.72
375_I	424_L	0.611	0.72
47_L	63_I	0.610	0.72
31_L	291_I	0.608	0.72
200_A	203_G	0.608	0.72
74_V	408_G	0.606	0.72
387_M	390_P	0.606	0.72
146_G	346_N	0.605	0.72
185_Q	424_L	0.603	0.71
320_L	324_I	0.599	0.71
171_A	174_I	0.597	0.71
92_T	102_V	0.597	0.71
142_P	146_G	0.597	0.71
7_A	132_L	0.597	0.71
417_I	421_Q	0.595	0.70
123_F	181_M	0.594	0.70
46_V	281_S	0.592	0.70
332_N	335_A	0.591	0.70
105_V	225_T	0.591	0.70
14_I	359_A	0.589	0.70
140_S	377_G	0.588	0.70
106_C	110_L	0.586	0.69
212_D	328_P	0.586	0.69
408_G	412_G	0.586	0.69
75_Y	79_A	0.585	0.69
135_L	296_I	0.584	0.69
253_V	356_L	0.584	0.69
351_S	373_R	0.583	0.69
20_V	23_V	0.583	0.69
200_A	422_F	0.582	0.69
210_M	329_F	0.582	0.69
203_G	341_V	0.582	0.69
118_R	123_F	0.581	0.69
99_A	102_V	0.581	0.69
59_H	270_H	0.581	0.69
45_F	326_V	0.581	0.69
218_P	348_V	0.580	0.69
52_V	56_L	0.579	0.68
65_E	282_H	0.579	0.68
362_D	365_E	0.579	0.68
48_G	52_V	0.579	0.68
107_F	244_I	0.578	0.68
147_I	347_F	0.578	0.68
240_T	282_H	0.576	0.68
99_A	111_S	0.574	0.68
366_K	376_I	0.573	0.68
49_I	288_T	0.572	0.67
163_G	198_L	0.571	0.67
140_S	384_V	0.570	0.67
61_L	274_A	0.569	0.67
116_I	248_L	0.568	0.67
117_D	121_K	0.567	0.67
298_G	350_F	0.567	0.67
181_M	184_K	0.567	0.67
250_S	295_P	0.564	0.66
99_A	232_L	0.564	0.66
32_D	222_P	0.564	0.66
342_G	345_V	0.563	0.66
278_A	294_V	0.563	0.66
112_V	116_I	0.562	0.66
174_I	179_N	0.562	0.66
311_K	315_M	0.561	0.66
138_Q	408_G	0.560	0.66
248_L	252_K	0.560	0.66
100_L	103_S	0.559	0.66
196_W	200_A	0.558	0.66
126_V	375_I	0.558	0.66
22_P	26_A	0.557	0.65
236_S	340_P	0.557	0.65
67_P	294_V	0.556	0.65
217_L	220_L	0.556	0.65
6_G	297_S	0.554	0.65
140_S	347_F	0.553	0.65
158_D	163_G	0.553	0.65
325_S	331_M	0.553	0.65
241_I	417_I	0.553	0.65
185_Q	366_K	0.552	0.65
129_G	357_A	0.552	0.65
102_V	228_F	0.551	0.65
210_M	332_N	0.549	0.64
78_Y	91_D	0.549	0.64
150_I	325_S	0.549	0.64
216_Q	400_V	0.549	0.64
195_G	203_G	0.548	0.64
171_A	190_L	0.548	0.64
161_V	164_L	0.548	0.64
243_L	251_M	0.546	0.64
297_S	410_V	0.545	0.64
176_T	187_S	0.545	0.64
274_A	278_A	0.545	0.64
101_L	104_A	0.544	0.64
160_L	198_L	0.544	0.64
133_L	354_G	0.543	0.64
232_L	235_T	0.543	0.64
164_L	192_L	0.543	0.64
54_Q	311_K	0.541	0.63
209_E	288_T	0.541	0.63
369_S	426_R	0.540	0.63
356_L	359_A	0.540	0.63
192_L	342_G	0.540	0.63
207_P	333_T	0.539	0.63
226_P	286_G	0.539	0.63
247_M	295_P	0.537	0.63
98_G	227_L	0.536	0.63
125_P	373_R	0.535	0.62
50_A	277_A	0.535	0.62
20_V	24_A	0.535	0.62
108_F	112_V	0.535	0.62
6_G	14_I	0.534	0.62
398_H	402_I	0.533	0.62
118_R	268_K	0.533	0.62
75_Y	100_L	0.532	0.62
78_Y	99_A	0.532	0.62
170_A	399_P	0.532	0.62
62_P	258_M	0.531	0.62
121_K	421_Q	0.531	0.62
145_K	156_G	0.530	0.62
24_A	76_T	0.529	0.62
265_P	269_H	0.528	0.61
297_S	356_L	0.528	0.61
201_A	205_A	0.528	0.61
94_R	225_T	0.527	0.61
112_V	276_F	0.527	0.61
101_L	225_T	0.526	0.61
79_A	92_T	0.525	0.61
282_H	285_S	0.525	0.61
400_V	403_S	0.525	0.61
250_S	356_L	0.524	0.61
280_F	315_M	0.524	0.61
95_G	100_L	0.523	0.61
217_L	241_I	0.522	0.61
75_Y	236_S	0.522	0.61
130_V	416_A	0.522	0.61
299_A	302_F	0.521	0.60
172_A	175_M	0.521	0.60
244_I	293_P	0.521	0.60
78_Y	235_T	0.521	0.60
62_P	99_A	0.520	0.60
378_I	384_V	0.519	0.60
42_S	289_G	0.519	0.60
235_T	404_L	0.518	0.60
371_R	425_W	0.518	0.60
127_V	420_D	0.516	0.60
100_L	111_S	0.515	0.59
106_C	162_F	0.515	0.59
138_Q	407_N	0.515	0.59
136_V	143_I	0.514	0.59
308_M	342_G	0.514	0.59
21_V	43_T	0.514	0.59
130_V	336_S	0.514	0.59
355_G	358_F	0.514	0.59
252_K	307_K	0.511	0.59
255_D	259_K	0.511	0.59
298_G	352_A	0.511	0.59
25_V	32_D	0.511	0.59
358_F	369_S	0.509	0.59
125_P	308_M	0.508	0.58
151_G	155_D	0.508	0.58
221_F	225_T	0.507	0.58
47_L	239_I	0.507	0.58
278_A	377_G	0.506	0.58
283_L	286_G	0.505	0.58
67_P	135_L	0.505	0.58
267_G	272_R	0.505	0.58
126_V	201_A	0.504	0.58
194_G	201_A	0.504	0.58
51_A	294_V	0.503	0.58
128_T	328_P	0.501	0.57
67_P	143_I	0.501	0.57
397_L	402_I	0.500	0.57
375_I	385_G	0.500	0.57
60_R	76_T	0.500	0.57

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qe7A	2	0.8841	100	0.426	Contact Map
4ikvA	1	0.8886	75.4	0.962	Contact Map
2gfpA	2	0.4273	71.3	0.963	Contact Map
1pw4A	1	0.475	69.5	0.964	Contact Map
3o7qA	1	0.4523	65.5	0.965	Contact Map
2cfqA	1	0.8818	63.8	0.965	Contact Map
3wdoA	1	0.4386	51.3	0.968	Contact Map
4j05A	3	0.8659	41	0.969	Contact Map
4tphA	2	0.8409	37.1	0.97	Contact Map
2nwlA	3	0.5091	34.7	0.971	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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