YWCA - BACSU - GREMLIN Contacts

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YWCA - Uncharacterized symporter YwcA

UniProt:	P39599	Sequences: MNMTAFLLFLAIVGLTLIITYFAAKRTKTTSEFYTAGGGLTGVQNGLAIAGDYMSAASFLGIAGMIALYGFDGFFYSIGFLVAYLVVLYIVAEPLRNLGKYTMADMIAARFKEKKIRGVAALNTIAISTFYMIAQLVGAGALIKLLLGLDYTAAVLIVGVLMTIYVVFGGMIATSWVQIIKAVLLMAGTLVISIIVFSKFGFSLNTMFEQMKTATPLGADFLNPGNKYKVPLETLSLNLALVLGTAGLPHILIRFYTVKDAKTARTSVVSATWIIGVFYIMTVFLGFGAAAFVGFDAITAADQAGNMAAPLLAKALGGDFLFAFVSAIAFATILAVVTGLVLSAASAFAHDIYSQIIRKGEATEKEQMKAARWASVAVSVLSILLAIFAQSLNVAFLVALAFAVAASANLPLIVFTVFWKRFNASGALWGSLTGLISALVLVSMSPSVWDPAGGAIFTGDPLIPLSNPGIISIPLGFLGAWLGTVLSSDKTIDEDTFAEIQVKAHTGVHMEQE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	513 (463)
Sequences:	11642 (7359)
Seq/√Len:	342.0

ECOLI - ACTP PUTP YIDK PANF
BACSU - YWCA OPUE YODF YCGO YHJB
HALSA - Q9HR16 Q9HP63
SULSO - Q7LX83 Q97VX6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
433_T	479_G	5.907	1.00
363_T	366_E	4.266	1.00
260_D	263_T	3.880	1.00
422_F	480_A	3.817	1.00
358_R	366_E	3.643	1.00
18_I	22_F	3.508	1.00
194_I	198_S	3.407	1.00
163_T	379_S	3.292	1.00
433_T	475_L	3.267	1.00
429_W	483_G	3.247	1.00
481_W	485_V	3.235	1.00
353_Y	362_A	3.083	1.00
479_G	483_G	3.067	1.00
196_V	288_G	3.059	1.00
206_T	209_E	3.046	1.00
423_N	487_S	2.935	1.00
437_S	475_L	2.934	1.00
430_G	480_A	2.915	1.00
369_K	373_W	2.858	1.00
483_G	487_S	2.797	1.00
365_K	369_K	2.778	1.00
150_D	153_A	2.774	1.00
425_S	487_S	2.760	1.00
108_A	117_R	2.753	1.00
415_F	480_A	2.668	1.00
159_G	383_I	2.553	1.00
426_G	484_T	2.533	1.00
373_W	377_A	2.382	1.00
259_K	263_T	2.329	1.00
171_M	257_T	2.319	1.00
289_A	308_A	2.279	1.00
97_N	261_A	2.278	1.00
31_S	38_G	2.275	1.00
40_L	175_S	2.231	1.00
11_A	15_L	2.168	1.00
206_T	210_Q	2.129	1.00
362_A	366_E	2.107	1.00
419_W	422_F	2.082	1.00
423_N	426_G	2.079	1.00
429_W	479_G	2.066	1.00
425_S	429_W	2.033	1.00
209_E	213_T	2.017	1.00
64_G	306_N	2.016	1.00
106_M	416_T	2.011	1.00
358_R	361_E	1.994	1.00
354_S	367_Q	1.970	1.00
32_E	37_G	1.958	1.00
380_V	384_L	1.954	1.00
156_L	160_V	1.931	1.00
412_L	427_A	1.930	1.00
436_I	440_V	1.927	1.00
263_T	266_T	1.917	1.00
188_G	328_I	1.900	1.00
350_H	354_S	1.899	1.00
190_L	194_I	1.897	1.00
14_G	18_I	1.879	1.00
262_K	266_T	1.861	1.00
111_F	422_F	1.851	1.00
56_A	138_G	1.844	1.00
311_L	315_A	1.827	1.00
421_R	485_V	1.811	1.00
100_K	109_A	1.805	1.00
293_V	315_A	1.802	1.00
423_N	484_T	1.798	1.00
426_G	483_G	1.793	1.00
415_F	477_F	1.792	1.00
353_Y	370_A	1.785	1.00
112_K	115_K	1.779	1.00
35_T	38_G	1.767	1.00
12_I	16_T	1.763	1.00
44_Q	179_I	1.754	1.00
369_K	372_R	1.735	1.00
262_K	265_R	1.733	1.00
209_E	212_K	1.732	1.00
478_L	482_L	1.731	1.00
162_M	337_V	1.728	1.00
366_E	369_K	1.726	1.00
419_W	485_V	1.713	1.00
205_N	209_E	1.709	1.00
19_I	180_I	1.707	1.00
210_Q	213_T	1.698	1.00
218_G	221_F	1.680	1.00
220_D	223_N	1.667	1.00
426_G	430_G	1.663	1.00
358_R	362_A	1.651	1.00
169_G	173_A	1.638	1.00
348_F	352_I	1.634	1.00
42_G	263_T	1.631	1.00
152_T	387_I	1.617	1.00
429_W	433_T	1.613	1.00
323_A	327_A	1.603	1.00
474_P	478_L	1.596	1.00
221_F	224_P	1.575	1.00
6_F	10_L	1.572	1.00
353_Y	366_E	1.564	1.00
419_W	481_W	1.560	1.00
348_F	374_A	1.549	1.00
115_K	428_L	1.547	1.00
341_V	379_S	1.539	1.00
353_Y	358_R	1.527	1.00
47_L	179_I	1.517	1.00
433_T	437_S	1.506	1.00
421_R	488_S	1.503	1.00
160_V	164_I	1.502	1.00
141_A	304_A	1.485	1.00
219_A	224_P	1.481	1.00
344_A	378_V	1.431	1.00
112_K	424_A	1.415	1.00
140_G	155_V	1.400	1.00
105_D	351_D	1.382	1.00
215_T	218_G	1.374	1.00
105_D	350_H	1.373	1.00
219_A	222_L	1.370	1.00
10_L	14_G	1.363	1.00
216_P	219_A	1.356	1.00
45_N	258_V	1.347	1.00
359_K	362_A	1.346	1.00
123_N	435_L	1.341	1.00
368_M	372_R	1.337	1.00
155_V	383_I	1.333	1.00
153_A	157_I	1.328	1.00
475_L	479_G	1.327	1.00
108_A	113_E	1.316	1.00
29_T	32_E	1.315	1.00
218_G	222_L	1.303	1.00
162_M	334_L	1.302	1.00
91_V	414_V	1.300	1.00
153_A	156_L	1.297	1.00
159_G	379_S	1.292	1.00
5_A	320_F	1.292	1.00
348_F	353_Y	1.290	1.00
362_A	367_Q	1.266	1.00
34_Y	371_A	1.265	1.00
7_L	11_A	1.261	1.00
366_E	370_A	1.260	1.00
15_L	19_I	1.257	1.00
421_R	489_D	1.255	1.00
216_P	220_D	1.253	1.00
357_I	362_A	1.249	1.00
178_Q	254_R	1.238	1.00
203_S	206_T	1.222	1.00
200_F	207_M	1.219	1.00
46_G	270_S	1.217	1.00
152_T	156_L	1.216	1.00
16_T	180_I	1.207	1.00
122_L	126_A	1.207	1.00
397_L	401_A	1.204	1.00
238_N	241_L	1.202	1.00
110_R	416_T	1.194	1.00
149_L	154_A	1.192	1.00
144_K	151_Y	1.186	1.00
119_V	428_L	1.184	1.00
311_L	314_K	1.177	1.00
199_K	292_F	1.173	1.00
156_L	383_I	1.171	1.00
106_M	110_R	1.167	1.00
424_A	428_L	1.165	1.00
219_A	223_N	1.163	1.00
156_L	387_I	1.159	1.00
177_V	338_T	1.157	1.00
437_S	479_G	1.157	1.00
102_T	346_S	1.157	1.00
374_A	377_A	1.156	1.00
118_G	356_I	1.156	1.00
304_A	307_M	1.153	1.00
422_F	484_T	1.152	1.00
302_D	305_G	1.144	1.00
237_L	240_A	1.142	1.00
195_I	199_K	1.141	1.00
136_L	159_G	1.136	1.00
210_Q	291_A	1.135	1.00
349_A	370_A	1.134	1.00
220_D	224_P	1.134	1.00
370_A	374_A	1.127	1.00
423_N	488_S	1.127	1.00
412_L	431_S	1.126	1.00
349_A	371_A	1.124	1.00
139_A	158_V	1.123	1.00
116_I	428_L	1.119	1.00
117_R	351_D	1.116	1.00
425_S	486_L	1.116	1.00
425_S	483_G	1.115	1.00
132_M	382_S	1.114	1.00
310_P	313_A	1.113	1.00
36_A	40_L	1.111	1.00
423_N	483_G	1.108	1.00
474_P	477_F	1.106	1.00
52_D	339_G	1.103	1.00
183_V	187_A	1.101	1.00
66_I	73_G	1.099	1.00
120_A	431_S	1.095	1.00
17_L	20_T	1.093	1.00
440_V	444_M	1.090	1.00
187_A	191_V	1.085	1.00
208_F	212_K	1.081	1.00
477_F	481_W	1.079	1.00
15_L	18_I	1.073	1.00
122_L	352_I	1.073	1.00
399_A	403_A	1.071	1.00
36_A	171_M	1.065	1.00
384_L	388_F	1.060	1.00
48_A	339_G	1.060	1.00
204_L	208_F	1.055	1.00
234_T	241_L	1.054	1.00
108_A	355_Q	1.052	1.00
15_L	180_I	1.044	1.00
353_Y	357_I	1.043	1.00
74_F	78_I	1.043	1.00
18_I	21_Y	1.042	1.00
398_V	402_F	1.042	1.00
232_L	236_S	1.041	1.00
364_E	367_Q	1.038	1.00
42_G	46_G	1.035	1.00
165_Y	338_T	1.035	1.00
205_N	208_F	1.026	1.00
234_T	238_N	1.026	1.00
479_G	482_L	1.023	1.00
234_T	237_L	1.023	1.00
50_A	274_I	1.022	1.00
17_L	21_Y	1.019	1.00
471_I	474_P	1.018	1.00
191_V	195_I	1.015	1.00
216_P	221_F	1.008	1.00
231_P	236_S	1.007	1.00
178_Q	338_T	1.004	1.00
191_V	321_L	1.002	1.00
207_M	211_M	0.996	1.00
86_V	90_I	0.995	1.00
31_S	99_G	0.995	1.00
233_E	237_L	0.993	1.00
415_F	422_F	0.993	1.00
13_V	16_T	0.991	1.00
224_P	227_K	0.979	1.00
27_T	32_E	0.975	1.00
430_G	476_G	0.975	1.00
313_A	325_V	0.974	1.00
68_L	305_G	0.965	1.00
149_L	157_I	0.964	1.00
92_A	95_L	0.964	1.00
167_V	376_V	0.961	1.00
7_L	10_L	0.960	1.00
430_G	434_G	0.956	1.00
399_A	402_F	0.955	1.00
136_L	155_V	0.954	1.00
133_I	385_L	0.953	1.00
198_S	204_L	0.953	1.00
162_M	338_T	0.952	1.00
236_S	239_L	0.949	1.00
94_P	97_N	0.948	1.00
353_Y	359_K	0.948	1.00
65_M	69_Y	0.947	1.00
469_G	473_I	0.946	1.00
165_Y	334_L	0.946	1.00
408_A	476_G	0.946	1.00
288_G	292_F	0.944	1.00
237_L	241_L	0.944	1.00
181_K	338_T	0.939	1.00
222_L	226_N	0.938	1.00
400_L	442_V	0.938	1.00
12_I	334_L	0.937	1.00
345_A	349_A	0.936	1.00
119_V	431_S	0.935	1.00
348_F	378_V	0.926	1.00
116_I	427_A	0.924	1.00
258_V	264_A	0.921	1.00
377_A	381_L	0.920	1.00
362_A	370_A	0.920	1.00
9_F	13_V	0.919	1.00
48_A	51_G	0.917	1.00
228_Y	231_P	0.916	1.00
123_N	431_S	0.915	1.00
447_S	450_D	0.913	1.00
42_G	266_T	0.911	1.00
416_T	427_A	0.908	1.00
475_L	478_L	0.907	1.00
22_F	26_R	0.906	1.00
178_Q	339_G	0.906	1.00
371_A	375_S	0.901	1.00
422_F	426_G	0.897	1.00
41_T	263_T	0.894	1.00
434_G	438_A	0.893	1.00
217_L	220_D	0.893	1.00
125_I	348_F	0.891	1.00
193_S	281_M	0.890	1.00
412_L	476_G	0.886	1.00
207_M	288_G	0.884	1.00
48_A	175_S	0.884	1.00
482_L	485_V	0.883	1.00
415_F	481_W	0.881	1.00
411_P	477_F	0.881	1.00
9_F	330_F	0.879	1.00
144_K	148_G	0.878	1.00
210_Q	214_A	0.878	1.00
107_I	116_I	0.873	1.00
56_A	333_I	0.871	1.00
207_M	210_Q	0.871	1.00
16_T	20_T	0.871	1.00
421_R	490_K	0.869	1.00
313_A	322_F	0.868	1.00
221_F	225_G	0.866	1.00
478_L	481_W	0.863	1.00
353_Y	356_I	0.863	1.00
81_L	276_G	0.863	1.00
289_A	312_L	0.859	1.00
34_Y	346_S	0.859	1.00
93_E	265_R	0.856	1.00
111_F	416_T	0.853	1.00
177_V	181_K	0.852	1.00
440_V	443_S	0.850	1.00
107_I	120_A	0.849	1.00
342_L	345_A	0.848	1.00
380_V	383_I	0.846	1.00
52_D	178_Q	0.845	1.00
115_K	424_A	0.842	1.00
44_Q	175_S	0.836	1.00
24_A	168_F	0.836	1.00
285_L	312_L	0.830	1.00
104_A	120_A	0.819	1.00
307_M	311_L	0.816	1.00
225_G	228_Y	0.815	1.00
151_Y	155_V	0.815	1.00
8_L	320_F	0.815	1.00
432_L	436_I	0.813	1.00
20_T	24_A	0.813	1.00
155_V	386_A	0.813	1.00
269_V	273_W	0.813	1.00
428_L	432_L	0.811	1.00
47_L	182_A	0.805	1.00
468_P	472_S	0.804	1.00
477_F	480_A	0.802	1.00
176_W	179_I	0.800	1.00
335_A	338_T	0.799	1.00
174_T	177_V	0.798	1.00
191_V	194_I	0.798	1.00
111_F	480_A	0.796	1.00
192_I	309_A	0.794	1.00
12_I	331_A	0.793	1.00
22_F	25_K	0.791	1.00
223_N	228_Y	0.791	1.00
36_A	257_T	0.789	1.00
231_P	237_L	0.788	1.00
192_I	196_V	0.787	1.00
30_T	34_Y	0.786	1.00
476_G	480_A	0.785	1.00
27_T	368_M	0.784	1.00
423_N	489_D	0.784	1.00
51_G	254_R	0.784	1.00
419_W	423_N	0.782	1.00
81_L	272_T	0.782	1.00
112_K	491_T	0.781	1.00
207_M	291_A	0.781	1.00
92_A	264_A	0.779	1.00
79_G	83_A	0.778	1.00
195_I	198_S	0.774	1.00
42_G	270_S	0.773	1.00
398_V	401_A	0.770	1.00
141_A	144_K	0.768	1.00
223_N	227_K	0.768	1.00
48_A	254_R	0.766	1.00
140_G	151_Y	0.765	1.00
110_R	419_W	0.763	1.00
48_A	52_D	0.762	1.00
349_A	367_Q	0.761	1.00
181_K	331_A	0.761	1.00
354_S	359_K	0.759	1.00
165_Y	335_A	0.758	1.00
197_F	203_S	0.756	1.00
66_I	287_F	0.755	1.00
17_L	164_I	0.754	1.00
317_G	321_L	0.752	1.00
20_T	23_A	0.752	1.00
165_Y	181_K	0.750	1.00
118_G	122_L	0.749	1.00
435_L	439_L	0.745	1.00
483_G	486_L	0.745	1.00
437_S	441_L	0.744	1.00
55_S	131_Y	0.744	1.00
71_F	287_F	0.744	1.00
373_W	376_V	0.744	1.00
21_Y	168_F	0.744	1.00
113_E	424_A	0.743	1.00
85_L	89_Y	0.742	1.00
5_A	322_F	0.741	0.99
40_L	45_N	0.740	0.99
419_W	484_T	0.739	0.99
487_S	490_K	0.738	0.99
235_L	241_L	0.737	0.99
444_M	448_V	0.732	0.99
200_F	203_S	0.731	0.99
105_D	109_A	0.729	0.99
25_K	28_K	0.729	0.99
196_V	199_K	0.727	0.99
214_A	290_A	0.726	0.99
472_S	476_G	0.726	0.99
295_F	302_D	0.725	0.99
425_S	488_S	0.723	0.99
186_M	190_L	0.721	0.99
434_G	476_G	0.719	0.99
488_S	491_T	0.719	0.99
89_Y	269_V	0.719	0.99
67_A	295_F	0.718	0.99
165_Y	173_A	0.718	0.99
199_K	316_L	0.718	0.99
139_A	333_I	0.717	0.99
181_K	334_L	0.716	0.99
125_I	344_A	0.716	0.99
312_L	316_L	0.716	0.99
197_F	284_F	0.715	0.99
437_S	440_V	0.715	0.99
131_Y	249_P	0.714	0.99
217_L	221_F	0.714	0.99
221_F	226_N	0.712	0.99
189_T	282_T	0.708	0.99
21_Y	24_A	0.707	0.99
486_L	489_D	0.706	0.99
375_S	379_S	0.706	0.99
174_T	339_G	0.706	0.99
348_F	370_A	0.703	0.99
422_F	427_A	0.703	0.99
470_I	474_P	0.701	0.99
201_G	206_T	0.699	0.99
429_W	432_L	0.698	0.99
135_Q	336_V	0.696	0.99
67_A	302_D	0.696	0.99
302_D	311_L	0.696	0.99
5_A	8_L	0.695	0.99
273_W	277_V	0.695	0.99
22_F	176_W	0.692	0.99
320_F	324_F	0.690	0.99
307_M	310_P	0.690	0.99
434_G	437_S	0.690	0.99
171_M	175_S	0.689	0.99
217_L	222_L	0.687	0.99
441_L	471_I	0.686	0.99
258_V	263_T	0.686	0.99
419_W	426_G	0.683	0.99
415_F	419_W	0.683	0.99
200_F	291_A	0.682	0.99
84_Y	87_V	0.681	0.99
200_F	206_T	0.681	0.99
482_L	486_L	0.679	0.99
76_Y	79_G	0.678	0.99
384_L	387_I	0.678	0.99
445_S	449_W	0.677	0.99
76_Y	80_F	0.677	0.99
231_P	234_T	0.676	0.99
489_D	492_I	0.676	0.99
96_R	261_A	0.675	0.99
102_T	351_D	0.673	0.99
431_S	434_G	0.671	0.99
8_L	323_A	0.668	0.99
77_S	84_Y	0.668	0.99
93_E	97_N	0.667	0.99
43_V	47_L	0.666	0.99
345_A	375_S	0.665	0.99
16_T	23_A	0.665	0.99
221_F	228_Y	0.665	0.99
383_I	387_I	0.664	0.99
220_D	225_G	0.664	0.99
58_S	279_Y	0.662	0.99
181_K	336_V	0.661	0.99
101_Y	105_D	0.661	0.99
137_V	141_A	0.660	0.99
197_F	204_L	0.659	0.99
426_G	429_W	0.659	0.99
135_Q	337_V	0.659	0.99
272_T	276_G	0.658	0.99
41_T	44_Q	0.657	0.99
154_A	158_V	0.657	0.99
446_P	449_W	0.656	0.99
59_F	189_T	0.654	0.99
290_A	294_G	0.654	0.99
433_T	483_G	0.653	0.99
336_V	340_L	0.652	0.99
340_L	343_S	0.652	0.99
423_N	427_A	0.650	0.99
295_F	303_Q	0.649	0.99
398_V	403_A	0.649	0.99
383_I	386_A	0.649	0.99
393_N	396_F	0.648	0.99
166_V	338_T	0.648	0.99
51_G	181_K	0.647	0.99
163_T	376_V	0.646	0.99
421_R	424_A	0.646	0.99
243_L	410_L	0.645	0.99
59_F	325_V	0.644	0.99
119_V	432_L	0.644	0.99
181_K	335_A	0.642	0.99
141_A	145_L	0.642	0.99
356_I	359_K	0.641	0.99
231_P	235_L	0.641	0.99
67_A	308_A	0.641	0.99
141_A	306_N	0.640	0.99
473_I	476_G	0.640	0.99
357_I	361_E	0.639	0.99
235_L	238_N	0.637	0.98
91_V	95_L	0.636	0.98
163_T	167_V	0.636	0.98
33_F	372_R	0.635	0.98
266_T	270_S	0.635	0.98
30_T	33_F	0.632	0.98
83_A	87_V	0.631	0.98
425_S	428_L	0.630	0.98
201_G	204_L	0.629	0.98
345_A	371_A	0.629	0.98
427_A	430_G	0.628	0.98
43_V	179_I	0.627	0.98
83_A	86_V	0.626	0.98
64_G	305_G	0.626	0.98
241_L	245_T	0.625	0.98
111_F	415_F	0.622	0.98
277_V	281_M	0.621	0.98
395_A	399_A	0.621	0.98
55_S	59_F	0.620	0.98
44_Q	176_W	0.620	0.98
294_G	302_D	0.619	0.98
481_W	484_T	0.618	0.98
234_T	239_L	0.617	0.98
367_Q	371_A	0.617	0.98
236_S	240_A	0.616	0.98
422_F	430_G	0.616	0.98
236_S	470_I	0.616	0.98
222_L	225_G	0.616	0.98
104_A	124_T	0.616	0.98
407_S	411_P	0.615	0.98
208_F	211_M	0.614	0.98
16_T	21_Y	0.613	0.98
90_I	93_E	0.612	0.98
32_E	172_I	0.612	0.98
45_N	48_A	0.610	0.98
354_S	364_E	0.609	0.98
83_A	242_V	0.608	0.98
285_L	309_A	0.607	0.98
283_V	287_F	0.606	0.98
334_L	338_T	0.603	0.98
232_L	239_L	0.601	0.98
442_V	447_S	0.601	0.98
11_A	18_I	0.600	0.98
345_A	374_A	0.599	0.98
40_L	257_T	0.598	0.98
79_G	88_L	0.596	0.98
112_K	116_I	0.596	0.98
172_I	176_W	0.596	0.98
90_I	94_P	0.595	0.98
132_M	337_V	0.593	0.98
131_Y	340_L	0.593	0.98
143_I	147_L	0.592	0.98
211_M	287_F	0.591	0.98
124_T	347_A	0.591	0.98
318_G	321_L	0.590	0.98
33_F	375_S	0.590	0.98
293_V	311_L	0.589	0.97
199_K	204_L	0.589	0.97
144_K	150_D	0.587	0.97
302_D	307_M	0.586	0.97
189_T	281_M	0.585	0.97
244_G	249_P	0.585	0.97
136_L	173_A	0.584	0.97
485_V	488_S	0.584	0.97
107_I	412_L	0.584	0.97
410_L	414_V	0.582	0.97
430_G	433_T	0.581	0.97
143_I	154_A	0.581	0.97
250_H	253_I	0.581	0.97
255_F	268_V	0.579	0.97
427_A	434_G	0.578	0.97
13_V	17_L	0.578	0.97
93_E	261_A	0.578	0.97
245_T	249_P	0.577	0.97
190_L	193_S	0.577	0.97
187_A	190_L	0.577	0.97
50_A	278_F	0.576	0.97
118_G	121_A	0.576	0.97
65_M	73_G	0.575	0.97
156_L	380_V	0.574	0.97
156_L	159_G	0.573	0.97
193_S	284_F	0.573	0.97
349_A	353_Y	0.573	0.97
53_Y	402_F	0.573	0.97
116_I	424_A	0.572	0.97
134_A	401_A	0.571	0.97
376_V	380_V	0.571	0.97
305_G	308_A	0.569	0.97
48_A	178_Q	0.569	0.97
290_A	308_A	0.569	0.97
421_R	484_T	0.568	0.97
23_A	27_T	0.568	0.97
31_S	364_E	0.568	0.97
88_L	92_A	0.567	0.97
26_R	172_I	0.566	0.97
23_A	176_W	0.566	0.97
421_R	425_S	0.566	0.97
129_T	381_L	0.565	0.97
381_L	384_L	0.563	0.97
59_F	64_G	0.562	0.97
319_D	322_F	0.561	0.97
13_V	20_T	0.560	0.97
321_L	324_F	0.560	0.97
437_S	472_S	0.560	0.97
439_L	443_S	0.559	0.97
466_S	470_I	0.558	0.97
118_G	352_I	0.557	0.96
12_I	20_T	0.557	0.96
12_I	181_K	0.556	0.96
127_I	404_V	0.556	0.96
292_F	312_L	0.556	0.96
51_G	182_A	0.555	0.96
211_M	214_A	0.554	0.96
111_F	427_A	0.554	0.96
153_A	160_V	0.554	0.96
215_T	221_F	0.554	0.96
266_T	269_V	0.554	0.96
372_R	375_S	0.553	0.96
103_M	413_I	0.553	0.96
46_G	50_A	0.553	0.96
212_K	216_P	0.553	0.96
81_L	85_L	0.551	0.96
261_A	265_R	0.549	0.96
30_T	364_E	0.548	0.96
174_T	254_R	0.548	0.96
350_H	367_Q	0.547	0.96
387_I	390_Q	0.546	0.96
145_L	307_M	0.546	0.96
84_Y	88_L	0.545	0.96
16_T	24_A	0.544	0.96
92_A	261_A	0.543	0.96
175_S	178_Q	0.543	0.96
117_R	355_Q	0.543	0.96
134_A	398_V	0.543	0.96
167_V	369_K	0.543	0.96
81_L	84_Y	0.541	0.96
53_Y	80_F	0.541	0.96
65_M	68_L	0.539	0.96
132_M	378_V	0.539	0.96
192_I	325_V	0.538	0.96
206_T	291_A	0.538	0.96
204_L	207_M	0.538	0.96
233_E	236_S	0.537	0.96
101_Y	350_H	0.536	0.96
197_F	201_G	0.535	0.96
394_V	397_L	0.535	0.96
140_G	154_A	0.534	0.96
314_K	322_F	0.534	0.96
21_Y	25_K	0.534	0.96
259_K	262_K	0.534	0.96
159_G	386_A	0.534	0.96
129_T	385_L	0.533	0.96
349_A	374_A	0.533	0.96
197_F	207_M	0.531	0.95
50_A	182_A	0.529	0.95
130_F	401_A	0.529	0.95
62_I	66_I	0.529	0.95
184_L	327_A	0.528	0.95
75_F	79_G	0.528	0.95
246_A	249_P	0.528	0.95
246_A	250_H	0.527	0.95
19_I	23_A	0.526	0.95
5_A	323_A	0.526	0.95
113_E	355_Q	0.526	0.95
222_L	227_K	0.525	0.95
292_F	316_L	0.525	0.95
155_V	158_V	0.524	0.95
429_W	482_L	0.523	0.95
467_N	471_I	0.523	0.95
315_A	319_D	0.522	0.95
317_G	325_V	0.520	0.95
340_L	409_N	0.520	0.95
57_A	402_F	0.520	0.95
137_V	151_Y	0.519	0.95
232_L	237_L	0.519	0.95
178_Q	335_A	0.518	0.95
113_E	117_R	0.516	0.95
136_L	382_S	0.516	0.95
279_Y	282_T	0.516	0.95
191_V	324_F	0.515	0.95
223_N	226_N	0.514	0.95
476_G	479_G	0.513	0.95
61_G	131_Y	0.513	0.95
361_E	366_E	0.512	0.94
26_R	39_G	0.512	0.94
174_T	342_L	0.511	0.94
254_R	339_G	0.510	0.94
23_A	26_R	0.510	0.94
30_T	367_Q	0.509	0.94
8_L	327_A	0.507	0.94
115_K	119_V	0.507	0.94
41_T	45_N	0.505	0.94
51_G	177_V	0.503	0.94
89_Y	93_E	0.502	0.94
127_I	405_A	0.502	0.94
150_D	154_A	0.502	0.94
145_L	310_P	0.501	0.94
94_P	417_V	0.501	0.94
50_A	54_M	0.500	0.94

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2xq2A	2	0.9162	100	0.236	Contact Map
3dh4A	3	0.8752	100	0.277	Contact Map
3l1lA	2	0.7934	99.4	0.852	Contact Map
3giaA	1	0.8246	99.3	0.858	Contact Map
4djkA	2	0.8031	99	0.875	Contact Map
4wgvA	2	0.7135	98.7	0.889	Contact Map
2jlnA	1	0.7992	98.7	0.89	Contact Map
4c7rA	3	0.8402	97.7	0.916	Contact Map
2wswA	3	0.768	96.2	0.932	Contact Map
2a65A	2	0.8226	94.5	0.939	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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