GERBA - BACSU - GREMLIN Contacts

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GERBA - Spore germination protein B1

UniProt:	P39569	Sequences: MQIDSDLQNNLDTLKKTLGQNDDMMFYTFAFGDSRQKACLLYIDGLTENKMLAQYVISPLQKEALAHKECSIEDLSAFFFGFHHSVVSTMKEIEQLVFSGQAILLADGYRGGLAFDTKSVATRSLDEPSSEVVERGPKIGFIEKLRTNTALLRERTSDPNLVIKEMTLGKRTKKKIAVAYIQDIAPDYVVKEVFKRLKSVNIDNLPESGTLEQLIEDEPFSIFPTILSTERPDRVESSLLEGRVSILVDGTPFALIVPATVDEFIHSPDDYSQRWIPMSLVRLLRYSSILITIYLPGLYISLVSFHTGLLPTRMAISIAGSRLNVPFPPFVEAFIMIFTIELIREAGLRLPKPIGQTIGLIGGVVIGQAAVQAQIVSALMVIVVSVTALASFTVPSYAYNFPLRIIRIGVMISATALGMYGVIMVYLFVIGHLMRLKSFGQDYIIPIMAQPGQDLKDTVIRIPTMFLKRRPTRNDPEDNIRQR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	483 (469)
Sequences:	2258 (1875)
Seq/√Len:	86.6

BACSU - GERBA YNDD YFKQ GERKA GERAA SP5AF

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
164_K	194_F	7.305	1.00
235_V	245_S	7.180	1.00
413_S	425_V	5.868	1.00
170_K	201_N	4.801	1.00
185_A	190_V	4.626	1.00
102_A	117_T	4.619	1.00
168_L	197_L	4.158	1.00
216_E	274_R	3.591	1.00
368_Q	372_Q	3.562	1.00
247_L	254_A	3.331	1.00
163_I	177_A	3.113	1.00
300_I	411_M	3.094	1.00
226_I	257_V	3.065	1.00
97_V	103_I	2.969	1.00
163_I	179_A	2.961	1.00
181_I	184_I	2.958	1.00
207_E	251_T	2.933	1.00
178_V	194_F	2.933	1.00
152_L	247_L	2.903	1.00
294_Y	426_Y	2.816	1.00
333_A	380_M	2.815	1.00
139_I	155_R	2.804	1.00
89_T	92_E	2.755	1.00
146_R	149_T	2.754	1.00
103_I	114_A	2.699	1.00
171_R	183_D	2.674	1.00
204_N	240_L	2.663	1.00
410_V	425_V	2.653	1.00
11_L	39_C	2.593	1.00
87_V	114_A	2.562	1.00
187_D	477_E	2.522	1.00
181_I	239_L	2.459	1.00
434_M	444_I	2.459	1.00
171_R	478_D	2.456	1.00
152_L	179_A	2.456	1.00
229_T	235_V	2.441	1.00
104_L	115_F	2.390	1.00
93_I	103_I	2.341	1.00
160_N	183_D	2.305	1.00
86_V	111_G	2.223	1.00
190_V	244_V	2.221	1.00
414_A	422_V	2.218	1.00
19_G	162_V	2.214	1.00
192_E	196_R	2.207	1.00
162_V	182_Q	2.203	1.00
410_V	429_V	2.182	1.00
158_D	171_R	2.173	1.00
166_M	198_K	2.171	1.00
128_P	140_G	2.135	1.00
337_I	407_R	2.132	1.00
193_V	257_V	2.131	1.00
76_S	86_V	2.124	1.00
21_N	162_V	2.116	1.00
137_P	272_S	2.109	1.00
333_A	411_M	2.022	1.00
265_I	289_I	2.009	1.00
193_V	244_V	1.992	1.00
196_R	217_D	1.943	1.00
87_V	92_E	1.940	1.00
280_L	405_I	1.894	1.00
238_S	256_I	1.889	1.00
168_L	176_I	1.882	1.00
24_M	43_I	1.829	1.00
95_Q	173_K	1.827	1.00
28_T	37_K	1.804	1.00
127_E	140_G	1.803	1.00
44_D	146_R	1.798	1.00
166_M	194_F	1.797	1.00
202_I	214_L	1.797	1.00
420_Y	424_M	1.787	1.00
105_L	112_G	1.774	1.00
156_T	236_E	1.761	1.00
176_I	248_V	1.743	1.00
182_Q	187_D	1.716	1.00
330_F	415_T	1.686	1.00
297_G	414_A	1.686	1.00
20_Q	164_K	1.683	1.00
191_K	195_K	1.680	1.00
40_L	104_L	1.679	1.00
200_V	211_L	1.657	1.00
192_E	195_K	1.651	1.00
179_A	254_A	1.645	1.00
145_L	177_A	1.637	1.00
450_Q	455_L	1.634	1.00
96_L	114_A	1.623	1.00
8_Q	37_K	1.617	1.00
193_V	246_I	1.616	1.00
288_S	393_T	1.611	1.00
15_K	26_F	1.606	1.00
96_L	101_Q	1.599	1.00
271_Y	457_D	1.596	1.00
101_Q	118_K	1.575	1.00
12_D	16_K	1.567	1.00
288_S	342_L	1.551	1.00
20_Q	182_Q	1.546	1.00
172_T	204_N	1.533	1.00
166_M	178_V	1.530	1.00
203_D	470_R	1.529	1.00
88_S	111_G	1.528	1.00
208_S	248_V	1.503	1.00
178_V	244_V	1.499	1.00
289_I	403_L	1.494	1.00
259_A	264_F	1.494	1.00
187_D	191_K	1.477	0.99
167_T	175_K	1.460	0.99
221_S	225_T	1.457	0.99
165_E	175_K	1.456	0.99
83_H	116_D	1.443	0.99
296_P	387_T	1.442	0.99
149_T	163_I	1.432	0.99
93_I	112_G	1.428	0.99
18_L	98_F	1.425	0.99
243_R	263_E	1.422	0.99
446_P	449_A	1.401	0.99
7_L	105_L	1.384	0.99
24_M	41_L	1.383	0.99
432_H	436_L	1.367	0.99
301_S	422_V	1.364	0.99
226_I	255_L	1.357	0.99
279_S	283_L	1.357	0.99
52_L	102_A	1.355	0.99
195_K	199_S	1.348	0.99
283_L	287_S	1.337	0.99
246_I	257_V	1.335	0.99
292_T	394_V	1.314	0.99
172_T	240_L	1.314	0.99
45_G	149_T	1.311	0.99
221_S	432_H	1.308	0.99
167_T	173_K	1.306	0.99
156_T	240_L	1.304	0.99
328_P	331_V	1.295	0.99
11_L	15_K	1.291	0.99
45_G	150_A	1.291	0.99
26_F	39_C	1.288	0.98
470_R	478_D	1.284	0.98
48_E	119_S	1.280	0.98
340_I	388_A	1.277	0.98
194_F	198_K	1.271	0.98
371_V	382_I	1.265	0.98
7_L	107_D	1.265	0.98
52_L	117_T	1.261	0.98
145_L	247_L	1.260	0.98
184_I	470_R	1.257	0.98
11_L	28_T	1.254	0.98
235_V	254_A	1.248	0.98
339_T	365_V	1.242	0.98
127_E	138_K	1.238	0.98
9_N	12_D	1.235	0.98
85_S	92_E	1.234	0.98
287_S	338_F	1.219	0.98
133_V	267_S	1.218	0.98
47_T	52_L	1.206	0.98
341_E	408_I	1.201	0.98
141_F	152_L	1.188	0.97
129_S	138_K	1.179	0.97
125_L	139_I	1.172	0.97
160_N	182_Q	1.171	0.97
330_F	412_I	1.163	0.97
103_I	112_G	1.152	0.97
189_V	244_V	1.144	0.97
14_L	24_M	1.143	0.97
165_E	177_A	1.140	0.97
245_S	256_I	1.140	0.97
10_N	105_L	1.132	0.97
225_T	274_R	1.126	0.96
149_T	179_A	1.125	0.96
337_I	404_R	1.125	0.96
26_F	41_L	1.123	0.96
185_A	244_V	1.117	0.96
50_K	54_Q	1.115	0.96
71_S	74_D	1.115	0.96
433_L	444_I	1.113	0.96
7_L	39_C	1.104	0.96
409_G	413_S	1.103	0.96
337_I	384_V	1.101	0.96
45_G	146_R	1.097	0.96
186_P	441_Q	1.095	0.96
73_E	76_S	1.094	0.96
327_F	331_V	1.089	0.96
195_K	198_K	1.089	0.96
139_I	154_E	1.084	0.96
166_M	197_L	1.082	0.96
99_S	157_S	1.081	0.96
13_T	17_T	1.081	0.96
256_I	263_E	1.079	0.95
139_I	250_G	1.067	0.95
101_Q	116_D	1.066	0.95
235_V	256_I	1.059	0.95
411_M	415_T	1.055	0.95
176_I	246_I	1.051	0.95
321_S	378_A	1.049	0.95
132_V	352_K	1.049	0.95
193_V	439_F	1.047	0.95
244_V	257_V	1.043	0.95
171_R	470_R	1.043	0.95
183_D	187_D	1.042	0.95
294_Y	410_V	1.040	0.94
31_F	38_A	1.039	0.94
120_V	144_K	1.039	0.94
30_A	37_K	1.039	0.94
46_L	150_A	1.037	0.94
186_P	475_D	1.031	0.94
329_P	380_M	1.028	0.94
20_Q	162_V	1.022	0.94
216_E	225_T	1.020	0.94
39_C	105_L	1.020	0.94
334_F	411_M	1.019	0.94
209_G	213_Q	1.013	0.94
134_E	269_D	1.012	0.94
245_S	254_A	1.011	0.94
126_D	140_G	1.011	0.94
206_P	210_T	1.010	0.94
139_I	151_L	1.009	0.94
223_F	406_I	1.006	0.93
156_T	181_I	1.005	0.93
22_D	164_K	1.003	0.93
196_R	215_I	0.999	0.93
260_T	263_E	0.992	0.93
241_E	271_Y	0.990	0.93
142_I	148_N	0.987	0.93
179_A	239_L	0.985	0.93
337_I	408_I	0.980	0.93
28_T	39_C	0.976	0.92
447_I	459_V	0.974	0.92
390_A	393_T	0.973	0.92
406_I	429_V	0.970	0.92
265_I	286_Y	0.969	0.92
152_L	235_V	0.966	0.92
27_Y	84_H	0.966	0.92
347_G	355_G	0.966	0.92
262_D	447_I	0.964	0.92
264_F	399_Y	0.964	0.92
11_L	41_L	0.963	0.92
192_E	217_D	0.957	0.92
223_F	432_H	0.951	0.91
297_G	410_V	0.950	0.91
101_Q	114_A	0.949	0.91
282_R	457_D	0.949	0.91
391_S	400_N	0.948	0.91
120_V	154_E	0.946	0.91
8_Q	12_D	0.944	0.91
337_I	344_R	0.942	0.91
261_V	444_I	0.941	0.91
171_R	181_I	0.940	0.91
340_I	359_G	0.939	0.91
155_R	174_K	0.931	0.91
174_K	248_V	0.926	0.90
191_K	194_F	0.922	0.90
93_I	105_L	0.921	0.90
128_P	230_E	0.919	0.90
150_A	154_E	0.918	0.90
178_V	193_V	0.918	0.90
300_I	333_A	0.916	0.90
305_F	416_A	0.916	0.90
157_S	175_K	0.916	0.90
213_Q	464_T	0.905	0.89
47_T	117_T	0.905	0.89
303_V	329_P	0.899	0.89
29_F	57_I	0.898	0.89
13_T	90_M	0.896	0.89
57_I	61_Q	0.896	0.89
262_D	458_T	0.894	0.89
85_S	96_L	0.892	0.89
152_L	161_L	0.892	0.89
131_E	234_R	0.889	0.88
207_E	272_S	0.887	0.88
280_L	341_E	0.885	0.88
23_D	153_R	0.883	0.88
38_A	104_L	0.882	0.88
213_Q	461_R	0.876	0.88
226_I	439_F	0.874	0.88
41_L	105_L	0.874	0.88
347_G	356_Q	0.873	0.87
121_A	150_A	0.872	0.87
237_S	241_E	0.870	0.87
358_I	388_A	0.869	0.87
18_L	21_N	0.865	0.87
227_L	263_E	0.864	0.87
223_F	429_V	0.858	0.87
350_L	392_F	0.857	0.86
462_I	467_L	0.855	0.86
207_E	210_T	0.853	0.86
288_S	390_A	0.850	0.86
200_V	203_D	0.850	0.86
95_Q	167_T	0.849	0.86
399_Y	402_P	0.847	0.86
171_R	184_I	0.845	0.86
7_L	10_N	0.843	0.86
155_R	250_G	0.843	0.86
154_E	249_D	0.842	0.86
92_E	95_Q	0.842	0.86
14_L	41_L	0.842	0.86
223_F	433_L	0.837	0.85
259_A	263_E	0.836	0.85
344_R	347_G	0.835	0.85
122_T	147_T	0.834	0.85
87_V	103_I	0.833	0.85
124_S	142_I	0.831	0.85
130_S	253_F	0.830	0.85
25_M	44_D	0.830	0.85
260_T	264_F	0.828	0.85
90_M	105_L	0.826	0.84
144_K	175_K	0.826	0.84
291_I	386_V	0.825	0.84
87_V	93_I	0.823	0.84
146_R	175_K	0.823	0.84
330_F	411_M	0.821	0.84
41_L	97_V	0.820	0.84
229_T	245_S	0.819	0.84
133_V	268_P	0.818	0.84
56_V	115_F	0.817	0.84
352_K	358_I	0.815	0.84
261_V	399_Y	0.813	0.83
234_R	268_P	0.810	0.83
54_Q	58_S	0.806	0.83
404_R	408_I	0.804	0.83
293_I	406_I	0.804	0.83
410_V	413_S	0.803	0.83
171_R	203_D	0.803	0.83
223_F	443_Y	0.802	0.83
321_S	379_L	0.789	0.82
222_I	432_H	0.789	0.82
130_S	354_I	0.788	0.82
123_R	143_E	0.788	0.82
227_L	259_A	0.786	0.81
17_T	94_E	0.785	0.81
184_I	203_D	0.783	0.81
397_Y	400_N	0.779	0.81
141_F	235_V	0.777	0.81
190_V	193_V	0.776	0.81
347_G	357_T	0.775	0.80
423_I	427_L	0.774	0.80
410_V	414_A	0.774	0.80
397_Y	401_F	0.773	0.80
18_L	94_E	0.771	0.80
453_Q	469_R	0.770	0.80
45_G	120_V	0.770	0.80
469_R	472_T	0.770	0.80
261_V	393_T	0.769	0.80
186_P	476_P	0.766	0.80
144_K	147_T	0.766	0.80
216_E	219_P	0.764	0.79
70_C	73_E	0.760	0.79
434_M	448_M	0.756	0.79
264_F	404_R	0.753	0.78
359_G	379_L	0.752	0.78
279_S	462_I	0.752	0.78
445_I	454_D	0.750	0.78
453_Q	456_K	0.748	0.78
238_S	263_E	0.748	0.78
178_V	185_A	0.747	0.78
412_I	415_T	0.745	0.78
341_E	344_R	0.744	0.78
322_R	325_V	0.742	0.77
71_S	75_L	0.740	0.77
128_P	253_F	0.738	0.77
210_T	237_S	0.738	0.77
330_F	334_F	0.738	0.77
296_P	337_I	0.737	0.77
451_P	454_D	0.735	0.77
209_G	214_L	0.735	0.77
406_I	409_G	0.735	0.77
372_Q	378_A	0.732	0.77
264_F	362_G	0.726	0.76
133_V	269_D	0.726	0.76
227_L	264_F	0.725	0.76
199_S	437_K	0.724	0.76
144_K	249_D	0.724	0.76
93_I	97_V	0.723	0.76
135_R	140_G	0.723	0.76
172_T	206_P	0.722	0.76
22_D	149_T	0.722	0.76
38_A	106_A	0.720	0.75
384_V	408_I	0.720	0.75
88_S	92_E	0.720	0.75
273_Q	401_F	0.719	0.75
206_P	240_L	0.718	0.75
357_T	363_G	0.718	0.75
203_D	471_P	0.715	0.75
122_T	144_K	0.715	0.75
99_S	118_K	0.710	0.74
235_V	422_V	0.710	0.74
329_P	359_G	0.706	0.74
317_S	379_L	0.703	0.74
152_L	236_E	0.703	0.74
51_M	117_T	0.702	0.73
292_T	403_L	0.701	0.73
205_L	211_L	0.701	0.73
321_S	363_G	0.699	0.73
237_S	266_H	0.698	0.73
304_S	329_P	0.696	0.73
149_T	177_A	0.695	0.73
135_R	212_E	0.694	0.73
336_M	380_M	0.694	0.73
202_I	205_L	0.692	0.72
157_S	249_D	0.692	0.72
445_I	449_A	0.692	0.72
60_L	104_L	0.692	0.72
118_K	146_R	0.691	0.72
142_I	147_T	0.691	0.72
86_V	113_L	0.689	0.72
126_D	129_S	0.688	0.72
368_Q	385_S	0.687	0.72
456_K	469_R	0.680	0.71
189_V	439_F	0.679	0.71
184_I	211_L	0.677	0.71
339_T	386_V	0.677	0.71
280_L	338_F	0.676	0.71
164_K	178_V	0.675	0.71
13_T	16_K	0.674	0.70
151_L	154_E	0.674	0.70
29_F	38_A	0.673	0.70
261_V	289_I	0.671	0.70
15_K	41_L	0.670	0.70
24_M	181_I	0.669	0.70
359_G	437_K	0.669	0.70
408_I	412_I	0.667	0.70
306_H	419_M	0.666	0.70
326_P	345_E	0.664	0.69
259_A	394_V	0.664	0.69
224_P	264_F	0.664	0.69
298_L	302_L	0.663	0.69
326_P	369_A	0.663	0.69
262_D	286_Y	0.662	0.69
179_A	247_L	0.662	0.69
43_I	46_L	0.662	0.69
158_D	478_D	0.661	0.69
322_R	368_Q	0.661	0.69
327_F	375_I	0.658	0.69
202_I	208_S	0.657	0.68
208_S	255_L	0.656	0.68
227_L	238_S	0.654	0.68
183_D	477_E	0.654	0.68
260_T	441_Q	0.652	0.68
25_M	42_Y	0.652	0.68
441_Q	474_N	0.652	0.68
257_V	439_F	0.652	0.68
187_D	190_V	0.651	0.68
21_N	24_M	0.649	0.68
264_F	396_S	0.649	0.68
205_L	210_T	0.648	0.67
139_I	236_E	0.647	0.67
361_I	388_A	0.647	0.67
342_L	359_G	0.646	0.67
456_K	462_I	0.644	0.67
119_S	126_D	0.643	0.67
324_N	385_S	0.642	0.67
20_Q	194_F	0.641	0.67
387_T	411_M	0.638	0.66
49_N	144_K	0.637	0.66
99_S	175_K	0.634	0.66
131_E	288_S	0.634	0.66
189_V	441_Q	0.633	0.66
265_I	399_Y	0.631	0.65
333_A	384_V	0.630	0.65
14_L	39_C	0.629	0.65
268_P	272_S	0.629	0.65
217_D	438_S	0.629	0.65
44_D	83_H	0.627	0.65
40_L	102_A	0.627	0.65
315_A	354_I	0.627	0.65
228_S	253_F	0.627	0.65
227_L	256_I	0.626	0.65
14_L	26_F	0.626	0.65
69_E	74_D	0.626	0.65
266_H	282_R	0.625	0.65
371_V	378_A	0.625	0.65
457_D	467_L	0.623	0.64
456_K	467_L	0.623	0.64
74_D	78_F	0.623	0.64
145_L	249_D	0.621	0.64
412_I	416_A	0.619	0.64
292_T	391_S	0.618	0.64
83_H	156_T	0.617	0.64
95_Q	287_S	0.616	0.64
306_H	418_G	0.614	0.63
222_I	405_I	0.613	0.63
215_I	439_F	0.612	0.63
348_L	353_P	0.612	0.63
329_P	364_V	0.611	0.63
298_L	447_I	0.609	0.63
294_Y	422_V	0.609	0.63
231_R	256_I	0.609	0.63
74_D	77_A	0.608	0.63
222_I	277_P	0.608	0.63
192_E	215_I	0.608	0.63
411_M	414_A	0.608	0.63
273_Q	398_A	0.607	0.62
295_L	386_V	0.607	0.62
14_L	105_L	0.604	0.62
297_G	400_N	0.604	0.62
343_I	361_I	0.604	0.62
131_E	321_S	0.603	0.62
225_T	366_I	0.602	0.62
296_P	383_V	0.601	0.62
125_L	151_L	0.601	0.62
133_V	137_P	0.600	0.61
155_R	231_R	0.600	0.61
181_I	197_L	0.600	0.61
56_V	111_G	0.600	0.61
374_Q	449_A	0.600	0.61
121_A	147_T	0.599	0.61
337_I	411_M	0.599	0.61
307_T	329_P	0.599	0.61
178_V	190_V	0.599	0.61
188_Y	191_K	0.599	0.61
152_L	354_I	0.598	0.61
290_L	294_Y	0.598	0.61
359_G	364_V	0.598	0.61
322_R	377_S	0.596	0.61
350_L	354_I	0.595	0.61
370_A	376_V	0.595	0.61
310_L	313_R	0.594	0.61
390_A	450_Q	0.593	0.61
229_T	395_P	0.591	0.60
405_I	478_D	0.591	0.60
155_R	236_E	0.591	0.60
291_I	295_L	0.590	0.60
238_S	243_R	0.589	0.60
260_T	359_G	0.589	0.60
300_I	305_F	0.588	0.60
170_K	478_D	0.588	0.60
298_L	419_M	0.588	0.60
438_S	442_D	0.587	0.60
309_L	397_Y	0.587	0.60
347_G	353_P	0.586	0.60
83_H	144_K	0.585	0.60
164_K	182_Q	0.585	0.60
218_E	225_T	0.585	0.60
474_N	477_E	0.584	0.59
144_K	154_E	0.583	0.59
343_I	381_V	0.583	0.59
72_I	111_G	0.583	0.59
457_D	461_R	0.583	0.59
219_P	465_M	0.582	0.59
88_S	91_K	0.582	0.59
350_L	363_G	0.582	0.59
40_L	115_F	0.580	0.59
292_T	296_P	0.580	0.59
455_L	458_T	0.580	0.59
300_I	415_T	0.579	0.59
196_R	438_S	0.578	0.59
106_A	469_R	0.577	0.59
227_L	234_R	0.576	0.58
409_G	429_V	0.576	0.58
411_M	417_L	0.574	0.58
345_E	349_R	0.573	0.58
45_G	154_E	0.573	0.58
29_F	40_L	0.573	0.58
259_A	339_T	0.572	0.58
337_I	400_N	0.571	0.58
145_L	175_K	0.570	0.58
345_E	369_A	0.570	0.58
430_I	434_M	0.570	0.58
72_I	86_V	0.569	0.57
243_R	266_H	0.568	0.57
128_P	272_S	0.567	0.57
297_G	337_I	0.566	0.57
310_L	353_P	0.565	0.57
365_V	433_L	0.565	0.57
422_V	425_V	0.565	0.57
84_H	113_L	0.564	0.57
212_E	228_S	0.564	0.57
340_I	347_G	0.563	0.57
14_L	18_L	0.563	0.57
275_W	363_G	0.562	0.57
46_L	154_E	0.562	0.57
424_M	428_F	0.562	0.57
315_A	340_I	0.562	0.57
346_A	388_A	0.561	0.56
375_I	382_I	0.561	0.56
270_D	345_E	0.560	0.56
96_L	168_L	0.560	0.56
222_I	337_I	0.560	0.56
461_R	464_T	0.559	0.56
166_M	246_I	0.558	0.56
186_P	474_N	0.557	0.56
122_T	142_I	0.557	0.56
22_D	165_E	0.556	0.56
44_D	49_N	0.556	0.56
18_L	97_V	0.556	0.56
94_E	97_V	0.556	0.56
57_I	241_E	0.555	0.56
71_S	300_I	0.555	0.56
140_G	253_F	0.555	0.56
213_Q	216_E	0.554	0.55
358_I	382_I	0.553	0.55
16_K	19_G	0.552	0.55
377_S	418_G	0.552	0.55
266_H	271_Y	0.551	0.55
18_L	24_M	0.550	0.55
171_R	240_L	0.550	0.55
138_K	253_F	0.549	0.55
297_G	397_Y	0.548	0.55
245_S	257_V	0.547	0.55
219_P	274_R	0.547	0.55
260_T	303_V	0.546	0.54
201_N	470_R	0.545	0.54
220_F	466_F	0.545	0.54
37_K	107_D	0.545	0.54
321_S	377_S	0.545	0.54
137_P	398_A	0.543	0.54
326_P	418_G	0.542	0.54
160_N	171_R	0.542	0.54
18_L	158_D	0.542	0.54
452_G	456_K	0.541	0.54
288_S	357_T	0.541	0.54
241_E	244_V	0.541	0.54
350_L	375_I	0.541	0.54
139_I	174_K	0.539	0.53
205_L	248_V	0.539	0.53
241_E	266_H	0.538	0.53
400_N	404_R	0.538	0.53
209_G	212_E	0.538	0.53
264_F	337_I	0.538	0.53
451_P	472_T	0.537	0.53
461_R	467_L	0.537	0.53
47_T	187_D	0.537	0.53
189_V	193_V	0.537	0.53
454_D	470_R	0.537	0.53
308_G	435_R	0.537	0.53
259_A	262_D	0.536	0.53
467_L	471_P	0.535	0.53
442_D	449_A	0.535	0.53
332_E	345_E	0.535	0.53
200_V	205_L	0.535	0.53
289_I	394_V	0.535	0.53
183_D	309_L	0.534	0.53
447_I	458_T	0.532	0.53
192_E	199_S	0.532	0.53
193_V	348_L	0.531	0.52
176_I	211_L	0.531	0.52
184_I	478_D	0.530	0.52
77_A	262_D	0.530	0.52
301_S	414_A	0.530	0.52
202_I	464_T	0.529	0.52
105_L	113_L	0.529	0.52
29_F	61_Q	0.527	0.52
135_R	208_S	0.526	0.52
12_D	15_K	0.526	0.52
309_L	388_A	0.526	0.52
176_I	208_S	0.526	0.52
31_F	61_Q	0.525	0.52
92_E	96_L	0.525	0.52
200_V	214_L	0.525	0.52
99_S	197_L	0.524	0.51
170_K	187_D	0.524	0.51
189_V	192_E	0.523	0.51
141_F	254_A	0.522	0.51
284_L	365_V	0.522	0.51
27_Y	142_I	0.522	0.51
410_V	426_Y	0.521	0.51
296_P	411_M	0.521	0.51
410_V	422_V	0.520	0.51
263_E	347_G	0.520	0.51
363_G	366_I	0.519	0.51
222_I	231_R	0.519	0.51
354_I	358_I	0.519	0.51
88_S	110_R	0.519	0.51
126_D	416_A	0.517	0.51
106_A	109_Y	0.517	0.51
294_Y	407_R	0.516	0.50
185_A	189_V	0.515	0.50
172_T	359_G	0.515	0.50
303_V	315_A	0.515	0.50
241_E	457_D	0.514	0.50
91_K	173_K	0.514	0.50
8_Q	28_T	0.514	0.50
120_V	146_R	0.514	0.50
325_V	377_S	0.513	0.50
151_L	155_R	0.513	0.50
399_Y	403_L	0.513	0.50
58_S	62_K	0.512	0.50
384_V	411_M	0.511	0.50
349_R	369_A	0.511	0.50
29_F	52_L	0.510	0.50
184_I	201_N	0.510	0.50
384_V	391_S	0.510	0.50
269_D	315_A	0.510	0.50
17_T	159_P	0.509	0.49
353_P	359_G	0.508	0.49
82_F	334_F	0.508	0.49
340_I	384_V	0.508	0.49
186_P	190_V	0.507	0.49
142_I	291_I	0.507	0.49
269_D	394_V	0.506	0.49
134_E	357_T	0.506	0.49
279_S	388_A	0.505	0.49
397_Y	404_R	0.505	0.49
229_T	239_L	0.505	0.49
183_D	476_P	0.505	0.49
462_I	466_F	0.505	0.49
289_I	363_G	0.504	0.49
322_R	329_P	0.504	0.49
344_R	406_I	0.504	0.49
426_Y	429_V	0.504	0.49
293_I	403_L	0.504	0.49
232_P	236_E	0.504	0.49
184_I	471_P	0.503	0.49
142_I	175_K	0.503	0.49
471_P	474_N	0.502	0.48
48_E	126_D	0.502	0.48
189_V	475_D	0.502	0.48
17_T	90_M	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3hh1A	2	0.2112	33.9	0.98	Contact Map
3kpeA	3	0.1014	16.5	0.983	Contact Map
4g3oA	1	0.0911	11.6	0.984	Contact Map
4p0zA	1	0.2174	10.7	0.984	Contact Map
1ez3A	1	0.2277	9.6	0.985	Contact Map
4bemA	3	0.1656	9.1	0.985	Contact Map
1qzmA	1	0.1615	9.1	0.985	Contact Map
2qwvA	2	0.3168	7.4	0.985	Contact Map
2xquA	3	0.1677	6.2	0.986	Contact Map
1mhqA	1	0.2505	6.1	0.986	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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