GLGB - BACSU - GREMLIN Contacts

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GLGB - 1,4-alpha-glucan branching enzyme GlgB

UniProt:	P39118	Sequences: MAAASPTAHDVYLFHEGSLFKSYQLFGSHYRELNGKSGYEFCVWAPHASEVRVAGDFNSWSGEEHVMHRVNDNGIWTLFIPGIGEKERYKYEIVTNNGEIRLKADPYAIYSEVRPNTASLTYDLEGYSWQDQKWQKKQKAKTLYEKPVFIYELHLGSWKKHSDGRHYSYKELSQTLIPYIKKHGFTHIELLPVYEHPYDRSWGYQGTGYYSPTSRFGPPHDLMKFVDECHQQNIGVILDWVPGHFCKDAHGLYMFDGEPLYEYKEERDRENWLWGTANFDLGKPEVHSFLISNALYWAEFYHIDGFRVDAVANILYWPNQDERHTNPYAVDFLKKLNQTMREAYPHVMMIAEDSTEWPQVTGAVEEGGLGFHYKWNMGWMNDVLKYMETPPEERRHCHQLISFSLLYAFSEHFVLPFSHDEVVYGKKSLLNKMPGDYWQKFAQYRLLLGYMTVHPGKKLIFMGSEFAQFDEWKDTEQLDWFLDSFPMHQKASVFTQDLLRFYQKSKILYEHDHRAQSFEWIDVHNDEQSIFSFIRYGQKHGEALVIICNFTPVVYHQYDVGVPFFTQYIEVLNSDSETYGGSGQINKKPLSAKKGALHHKPCYITMTIPPYGISILRAVKKRGEIKR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	627 (537)
Sequences:	9014 (5983)
Seq/√Len:	258.2

ECOLI - GLGB GLGX MALZ YGAQ SUCP TREC AMY1
BACSU - GLGB PULA BBMA TREC O16G2 O16G3 O16G1 AMY
SULSO - Q7LX99 TREZ

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
178_P	232_Q	4.221	1.00
170_K	224_K	4.150	1.00
228_E	231_Q	3.934	1.00
170_K	221_D	3.891	1.00
497_D	579_Y	3.789	1.00
182_K	496_Q	3.702	1.00
453_V	533_F	3.281	1.00
67_M	78_L	3.211	1.00
181_K	232_Q	3.204	1.00
223_M	300_F	3.170	1.00
188_I	229_C	3.030	1.00
222_L	226_V	2.959	1.00
287_H	335_K	2.913	1.00
467_A	491_A	2.908	1.00
500_R	504_K	2.795	1.00
448_L	495_T	2.756	1.00
218_P	221_D	2.713	1.00
341_R	372_H	2.702	1.00
228_E	232_Q	2.627	1.00
159_K	175_T	2.617	1.00
38_G	79_F	2.579	1.00
479_D	482_L	2.481	1.00
525_N	528_Q	2.448	1.00
296_Y	301_Y	2.409	1.00
134_W	302_H	2.338	1.00
298_A	347_V	2.288	1.00
224_K	228_E	2.214	1.00
417_F	464_S	2.192	1.00
190_L	193_V	2.175	1.00
190_L	225_F	2.173	1.00
222_L	303_I	2.172	1.00
288_S	292_S	2.167	1.00
177_I	232_Q	2.163	1.00
453_V	546_I	2.110	1.00
242_P	293_N	2.098	1.00
153_L	158_W	2.074	1.00
50_E	66_V	2.071	1.00
173_S	224_K	2.067	1.00
172_L	225_F	2.064	1.00
220_H	223_M	2.029	1.00
149_F	499_L	2.000	1.00
147_P	509_Y	1.948	1.00
260_L	263_Y	1.941	1.00
493_V	496_Q	1.916	1.00
148_V	187_H	1.915	1.00
39_Y	83_I	1.909	1.00
258_E	264_K	1.908	1.00
520_W	523_V	1.907	1.00
230_H	304_D	1.894	1.00
50_E	94_V	1.889	1.00
505_S	542_E	1.888	1.00
52_R	92_E	1.879	1.00
170_K	173_S	1.857	1.00
193_V	222_L	1.854	1.00
340_M	347_V	1.841	1.00
261_Y	264_K	1.840	1.00
92_E	102_L	1.838	1.00
84_G	87_E	1.830	1.00
174_Q	228_E	1.824	1.00
452_T	499_L	1.824	1.00
182_K	492_S	1.815	1.00
299_E	343_A	1.810	1.00
221_D	224_K	1.807	1.00
54_A	102_L	1.806	1.00
258_E	263_Y	1.805	1.00
222_L	225_F	1.803	1.00
339_T	342_E	1.798	1.00
28_S	39_Y	1.798	1.00
225_F	229_C	1.794	1.00
51_V	93_I	1.790	1.00
137_K	302_H	1.762	1.00
534_I	543_A	1.752	1.00
476_E	479_D	1.739	1.00
497_D	500_R	1.736	1.00
505_S	544_L	1.721	1.00
477_Q	482_L	1.718	1.00
473_K	476_E	1.709	1.00
227_D	231_Q	1.706	1.00
30_Y	39_Y	1.702	1.00
52_R	94_V	1.700	1.00
210_Y	293_N	1.700	1.00
155_L	172_L	1.691	1.00
436_D	439_Q	1.687	1.00
153_L	180_I	1.678	1.00
258_E	262_E	1.675	1.00
148_V	348_M	1.673	1.00
43_V	51_V	1.665	1.00
501_F	571_V	1.643	1.00
43_V	93_I	1.637	1.00
173_S	228_E	1.633	1.00
477_Q	481_F	1.628	1.00
534_I	545_V	1.627	1.00
519_E	536_Y	1.624	1.00
570_E	573_N	1.624	1.00
529_S	551_T	1.617	1.00
515_A	523_V	1.615	1.00
247_K	270_E	1.612	1.00
180_I	234_I	1.611	1.00
42_C	77_T	1.599	1.00
521_I	545_V	1.597	1.00
83_I	87_E	1.595	1.00
260_L	264_K	1.592	1.00
88_R	112_E	1.589	1.00
65_H	78_L	1.581	1.00
332_F	336_L	1.577	1.00
112_E	116_N	1.568	1.00
441_F	488_H	1.565	1.00
295_L	339_T	1.561	1.00
258_E	261_Y	1.542	1.00
296_Y	300_F	1.542	1.00
127_Y	227_D	1.531	1.00
150_I	414_V	1.525	1.00
466_F	478_L	1.519	1.00
362_G	366_E	1.515	1.00
41_F	91_Y	1.513	1.00
111_S	208_G	1.507	1.00
489_Q	493_V	1.489	1.00
180_I	188_I	1.487	1.00
492_S	496_Q	1.487	1.00
493_V	497_D	1.482	1.00
52_R	66_V	1.476	1.00
30_Y	85_E	1.474	1.00
294_A	336_L	1.473	1.00
62_G	92_E	1.472	1.00
31_R	79_F	1.458	1.00
172_L	190_L	1.453	1.00
54_A	92_E	1.453	1.00
279_F	286_V	1.452	1.00
163_D	166_H	1.441	1.00
49_S	96_N	1.438	1.00
64_E	92_E	1.435	1.00
331_D	334_K	1.434	1.00
405_L	409_F	1.430	1.00
298_A	340_M	1.428	1.00
395_R	527_E	1.417	1.00
195_E	214_S	1.416	1.00
212_P	222_L	1.414	1.00
445_R	494_F	1.399	1.00
482_L	488_H	1.397	1.00
49_S	94_V	1.396	1.00
359_Q	362_G	1.385	1.00
42_C	75_I	1.384	1.00
532_S	547_I	1.377	1.00
494_F	574_S	1.374	1.00
448_L	460_I	1.367	1.00
165_R	171_E	1.367	1.00
104_A	111_S	1.358	1.00
187_H	237_I	1.357	1.00
170_K	174_Q	1.340	1.00
404_S	454_H	1.330	1.00
295_L	299_E	1.318	1.00
229_C	234_I	1.317	1.00
194_Y	293_N	1.317	1.00
521_I	534_I	1.313	1.00
179_Y	492_S	1.311	1.00
195_E	213_T	1.305	1.00
210_Y	292_S	1.304	1.00
379_W	454_H	1.300	1.00
65_H	80_I	1.299	1.00
52_R	64_E	1.296	1.00
56_D	87_E	1.295	1.00
153_L	188_I	1.294	1.00
259_P	264_K	1.293	1.00
337_N	341_R	1.292	1.00
153_L	172_L	1.292	1.00
425_G	444_Y	1.290	1.00
95_T	101_R	1.289	1.00
280_D	283_K	1.284	1.00
285_E	288_S	1.279	1.00
262_E	265_E	1.275	1.00
156_G	160_K	1.272	1.00
131_D	302_H	1.271	1.00
295_L	343_A	1.263	1.00
40_E	77_T	1.263	1.00
177_I	228_E	1.262	1.00
69_R	72_D	1.260	1.00
39_Y	121_T	1.259	1.00
87_E	121_T	1.247	1.00
240_W	294_A	1.237	1.00
515_A	518_F	1.235	1.00
437_Y	469_F	1.234	1.00
390_P	393_E	1.232	1.00
444_Y	467_A	1.232	1.00
259_P	262_E	1.231	1.00
291_I	339_T	1.228	1.00
476_E	482_L	1.228	1.00
148_V	186_T	1.227	1.00
494_F	572_L	1.226	1.00
237_I	350_I	1.218	1.00
158_W	176_L	1.213	1.00
260_L	265_E	1.211	1.00
485_F	488_H	1.210	1.00
448_L	498_L	1.210	1.00
264_K	267_R	1.209	1.00
187_H	235_G	1.206	1.00
298_A	344_Y	1.202	1.00
155_L	190_L	1.193	1.00
135_Q	227_D	1.192	1.00
31_R	36_K	1.189	1.00
180_I	184_G	1.188	1.00
338_Q	364_V	1.187	1.00
291_I	336_L	1.179	1.00
499_L	503_Q	1.179	1.00
168_S	171_E	1.176	1.00
537_G	541_G	1.176	1.00
263_Y	266_E	1.176	1.00
134_W	137_K	1.175	1.00
259_P	265_E	1.170	1.00
178_P	182_K	1.169	1.00
259_P	263_Y	1.162	1.00
178_P	181_K	1.158	1.00
177_I	229_C	1.154	1.00
387_M	447_L	1.151	1.00
533_F	546_I	1.151	1.00
94_V	100_I	1.151	1.00
169_Y	212_P	1.151	1.00
449_G	494_F	1.147	1.00
427_K	431_N	1.144	1.00
28_S	91_Y	1.141	1.00
496_Q	500_R	1.136	1.00
90_K	102_L	1.136	1.00
263_Y	267_R	1.130	1.00
281_L	290_L	1.129	1.00
194_Y	206_G	1.127	1.00
107_Y	261_Y	1.126	1.00
460_I	464_S	1.124	1.00
180_I	185_F	1.121	1.00
40_E	79_F	1.116	1.00
132_Q	224_K	1.115	1.00
127_Y	130_Q	1.110	1.00
497_D	578_T	1.109	1.00
441_F	445_R	1.108	1.00
189_E	375_W	1.107	1.00
143_L	187_H	1.105	1.00
111_S	211_S	1.102	1.00
22_S	25_L	1.102	1.00
336_L	349_M	1.101	1.00
415_L	418_S	1.097	1.00
337_N	349_M	1.094	1.00
229_C	236_V	1.092	1.00
212_P	297_W	1.088	1.00
518_F	521_I	1.086	1.00
132_Q	135_Q	1.084	1.00
381_N	385_K	1.084	1.00
385_K	388_E	1.080	1.00
31_R	37_S	1.078	1.00
441_F	444_Y	1.076	1.00
183_H	492_S	1.075	1.00
92_E	100_I	1.069	1.00
108_A	119_S	1.069	1.00
522_D	525_N	1.068	1.00
31_R	40_E	1.065	1.00
437_Y	440_K	1.065	1.00
198_Y	205_Q	1.064	1.00
108_A	111_S	1.059	1.00
260_L	266_E	1.058	1.00
222_L	301_Y	1.057	1.00
335_K	338_Q	1.055	1.00
193_V	238_L	1.053	1.00
222_L	238_L	1.053	1.00
26_F	75_I	1.052	1.00
262_E	266_E	1.051	1.00
399_Q	402_S	1.050	1.00
39_Y	84_G	1.045	1.00
258_E	266_E	1.041	1.00
445_R	491_A	1.039	1.00
385_K	400_L	1.039	1.00
156_G	216_F	1.039	1.00
36_K	79_F	1.038	1.00
518_F	523_V	1.035	1.00
445_R	490_K	1.031	1.00
507_I	544_L	1.030	1.00
278_N	281_L	1.030	1.00
28_S	41_F	1.029	1.00
335_K	339_T	1.029	1.00
477_Q	480_W	1.027	1.00
383_V	447_L	1.026	1.00
80_I	83_I	1.026	1.00
158_W	172_L	1.026	1.00
489_Q	492_S	1.025	1.00
338_Q	342_E	1.021	1.00
53_V	78_L	1.021	1.00
291_I	295_L	1.021	1.00
478_L	482_L	1.019	1.00
88_R	120_L	1.008	1.00
56_D	88_R	1.005	1.00
261_Y	265_E	1.000	1.00
517_S	520_W	0.999	1.00
295_L	344_Y	0.999	1.00
238_L	303_I	0.998	1.00
149_F	503_Q	0.996	1.00
340_M	343_A	0.995	1.00
124_L	223_M	0.995	1.00
425_G	429_L	0.992	1.00
331_D	335_K	0.992	1.00
174_Q	178_P	0.990	1.00
508_L	544_L	0.990	1.00
494_F	498_L	0.989	1.00
551_T	555_Y	0.985	1.00
404_S	407_Y	0.985	1.00
501_F	572_L	0.984	1.00
271_N	278_N	0.982	1.00
110_Y	122_Y	0.978	1.00
460_I	495_T	0.977	1.00
263_Y	268_D	0.976	1.00
95_T	99_E	0.975	1.00
135_Q	138_Q	0.973	1.00
153_L	462_M	0.973	1.00
264_K	268_D	0.972	1.00
212_P	296_Y	0.972	1.00
158_W	179_Y	0.970	1.00
129_W	132_Q	0.967	1.00
142_T	145_E	0.966	1.00
250_H	255_F	0.966	1.00
544_L	571_V	0.966	1.00
26_F	42_C	0.960	1.00
251_G	255_F	0.958	1.00
452_T	460_I	0.957	1.00
253_Y	277_A	0.955	1.00
25_L	42_C	0.952	1.00
536_Y	543_A	0.951	1.00
282_G	328_Y	0.950	1.00
450_Y	548_C	0.947	1.00
29_H	109_I	0.947	1.00
25_L	40_E	0.943	1.00
155_L	169_Y	0.942	1.00
446_L	550_F	0.941	1.00
417_F	447_L	0.940	1.00
22_S	107_Y	0.940	1.00
396_H	399_Q	0.938	1.00
294_A	306_F	0.937	1.00
400_L	406_L	0.937	1.00
124_L	127_Y	0.937	1.00
278_N	313_N	0.937	1.00
210_Y	289_F	0.936	1.00
462_M	478_L	0.932	1.00
172_L	229_C	0.927	1.00
562_V	568_Y	0.926	1.00
44_W	285_E	0.925	1.00
446_L	548_C	0.914	1.00
57_F	61_S	0.912	1.00
167_Y	175_T	0.911	1.00
126_G	220_H	0.909	1.00
149_F	452_T	0.906	1.00
515_A	520_W	0.905	1.00
384_L	388_E	0.901	1.00
416_P	447_L	0.900	1.00
398_H	402_S	0.899	1.00
382_D	396_H	0.899	1.00
208_G	211_S	0.897	1.00
47_H	258_E	0.897	1.00
122_Y	126_G	0.897	1.00
510_E	538_Q	0.894	1.00
375_W	380_M	0.891	1.00
150_I	237_I	0.890	1.00
252_L	255_F	0.890	1.00
57_F	60_W	0.887	1.00
377_M	380_M	0.886	1.00
244_H	309_D	0.886	1.00
54_A	64_E	0.885	1.00
165_R	174_Q	0.884	1.00
389_T	393_E	0.884	1.00
71_N	77_T	0.884	1.00
448_L	491_A	0.883	1.00
530_I	558_Y	0.876	1.00
448_L	464_S	0.876	1.00
309_D	420_D	0.872	1.00
443_Q	446_L	0.871	1.00
429_L	448_L	0.868	1.00
46_P	74_G	0.867	1.00
55_G	65_H	0.866	1.00
330_V	334_K	0.863	1.00
397_C	400_L	0.862	1.00
449_G	574_S	0.861	1.00
83_I	121_T	0.858	1.00
55_G	87_E	0.858	1.00
399_Q	406_L	0.856	1.00
410_S	414_V	0.855	0.99
30_Y	36_K	0.852	0.99
109_I	124_L	0.851	0.99
261_Y	266_E	0.850	0.99
383_V	450_Y	0.844	0.99
209_Y	289_F	0.842	0.99
361_T	364_V	0.839	0.99
174_Q	224_K	0.839	0.99
488_H	491_A	0.839	0.99
186_T	234_I	0.839	0.99
68_H	77_T	0.838	0.99
284_P	288_S	0.837	0.99
194_Y	303_I	0.837	0.99
309_D	352_E	0.836	0.99
209_Y	279_F	0.835	0.99
537_G	540_H	0.835	0.99
411_E	414_V	0.834	0.99
195_E	211_S	0.832	0.99
380_M	384_L	0.832	0.99
501_F	505_S	0.829	0.99
109_I	300_F	0.826	0.99
219_P	301_Y	0.824	0.99
252_L	256_D	0.823	0.99
250_H	253_Y	0.822	0.99
294_A	308_V	0.822	0.99
260_L	267_R	0.821	0.99
114_R	199_D	0.821	0.99
389_T	400_L	0.820	0.99
132_Q	137_K	0.818	0.99
137_K	233_N	0.816	0.99
55_G	60_W	0.815	0.99
401_I	404_S	0.814	0.99
255_F	289_F	0.811	0.99
287_H	331_D	0.811	0.99
402_S	405_L	0.810	0.99
486_P	489_Q	0.809	0.99
466_F	492_S	0.808	0.99
53_V	80_I	0.807	0.99
515_A	521_I	0.805	0.99
437_Y	487_M	0.800	0.99
299_E	344_Y	0.798	0.99
528_Q	555_Y	0.798	0.99
334_K	338_Q	0.796	0.99
395_R	398_H	0.794	0.99
154_H	191_L	0.793	0.99
444_Y	491_A	0.792	0.99
107_Y	292_S	0.789	0.99
151_Y	465_E	0.788	0.99
294_A	340_M	0.788	0.99
161_H	167_Y	0.787	0.99
150_I	413_F	0.787	0.99
31_R	38_G	0.786	0.99
408_A	413_F	0.786	0.99
173_S	221_D	0.784	0.99
394_R	397_C	0.783	0.99
425_G	467_A	0.783	0.99
442_A	445_R	0.782	0.99
41_F	53_V	0.782	0.99
224_K	227_D	0.782	0.99
400_L	404_S	0.781	0.99
340_M	349_M	0.781	0.99
237_I	305_G	0.780	0.99
147_P	503_Q	0.780	0.99
119_S	123_D	0.778	0.99
85_E	123_D	0.777	0.99
302_H	344_Y	0.777	0.99
137_K	141_K	0.777	0.99
293_N	296_Y	0.776	0.99
449_G	548_C	0.775	0.99
210_Y	296_Y	0.774	0.99
401_I	531_F	0.771	0.99
484_S	489_Q	0.771	0.99
401_I	405_L	0.770	0.99
259_P	267_R	0.768	0.99
339_T	343_A	0.768	0.99
159_K	167_Y	0.766	0.99
472_W	475_T	0.765	0.99
570_E	576_S	0.765	0.99
519_E	534_I	0.764	0.99
129_W	134_W	0.762	0.99
537_G	542_E	0.761	0.99
568_Y	571_V	0.760	0.99
185_F	234_I	0.759	0.99
245_F	279_F	0.759	0.99
441_F	490_K	0.758	0.99
144_Y	147_P	0.754	0.99
307_R	420_D	0.754	0.99
350_I	459_L	0.754	0.99
265_E	268_D	0.753	0.99
453_V	548_C	0.752	0.99
131_D	134_W	0.752	0.99
333_L	336_L	0.749	0.99
511_H	514_R	0.748	0.99
220_H	224_K	0.744	0.99
449_G	453_V	0.742	0.99
490_K	493_V	0.741	0.99
359_Q	366_E	0.741	0.99
206_G	209_Y	0.741	0.99
274_W	313_N	0.739	0.99
123_D	126_G	0.737	0.99
167_Y	171_E	0.737	0.99
145_E	373_Y	0.736	0.98
24_Q	300_F	0.736	0.98
385_K	389_T	0.736	0.98
545_V	568_Y	0.731	0.98
165_R	168_S	0.730	0.98
104_A	108_A	0.729	0.98
314_I	329_A	0.729	0.98
530_I	535_R	0.727	0.98
379_W	383_V	0.727	0.98
352_E	419_H	0.726	0.98
418_S	459_L	0.725	0.98
449_G	498_L	0.725	0.98
49_S	98_G	0.722	0.98
416_P	451_M	0.720	0.98
153_L	176_L	0.719	0.98
132_Q	136_K	0.719	0.98
298_A	306_F	0.718	0.98
470_D	479_D	0.715	0.98
58_N	61_S	0.714	0.98
385_K	390_P	0.709	0.98
85_E	126_G	0.709	0.98
162_S	165_R	0.705	0.98
66_V	69_R	0.705	0.98
194_Y	238_L	0.705	0.98
450_Y	550_F	0.704	0.98
183_H	499_L	0.704	0.98
230_H	236_V	0.704	0.98
196_H	199_D	0.702	0.98
169_Y	225_F	0.701	0.98
388_E	427_K	0.701	0.98
247_K	275_G	0.700	0.98
226_V	303_I	0.700	0.98
169_Y	221_D	0.698	0.98
135_Q	302_H	0.698	0.98
270_E	275_G	0.696	0.98
263_Y	269_R	0.695	0.98
270_E	273_L	0.695	0.98
478_L	481_F	0.694	0.98
186_T	503_Q	0.687	0.98
155_L	193_V	0.687	0.98
117_T	120_L	0.686	0.98
395_R	399_Q	0.684	0.98
387_M	550_F	0.684	0.98
326_N	332_F	0.682	0.98
58_N	65_H	0.682	0.98
397_C	401_I	0.682	0.98
284_P	287_H	0.682	0.98
447_L	450_Y	0.681	0.98
264_K	269_R	0.681	0.98
170_K	218_P	0.681	0.98
169_Y	217_G	0.680	0.97
441_F	491_A	0.679	0.97
130_Q	227_D	0.678	0.97
179_Y	466_F	0.678	0.97
481_F	484_S	0.675	0.97
149_F	185_F	0.673	0.97
492_S	495_T	0.672	0.97
226_V	236_V	0.670	0.97
137_K	227_D	0.670	0.97
109_I	296_Y	0.670	0.97
120_L	123_D	0.669	0.97
173_S	225_F	0.668	0.97
123_D	127_Y	0.668	0.97
258_E	265_E	0.667	0.97
438_W	554_V	0.666	0.97
498_L	572_L	0.665	0.97
223_M	301_Y	0.664	0.97
338_Q	365_E	0.662	0.97
131_D	135_Q	0.661	0.97
311_V	351_A	0.660	0.97
110_Y	120_L	0.658	0.97
428_S	431_N	0.658	0.97
116_N	119_S	0.656	0.97
72_D	77_T	0.654	0.97
161_H	165_R	0.654	0.97
133_K	136_K	0.652	0.97
165_R	170_K	0.652	0.97
532_S	545_V	0.652	0.97
394_R	402_S	0.650	0.97
53_V	91_Y	0.649	0.97
67_M	91_Y	0.648	0.97
169_Y	222_L	0.648	0.97
529_S	550_F	0.648	0.97
130_Q	231_Q	0.646	0.97
55_G	58_N	0.646	0.97
547_I	560_V	0.646	0.97
376_N	380_M	0.646	0.97
491_A	494_F	0.645	0.97
399_Q	404_S	0.645	0.97
253_Y	257_G	0.645	0.97
49_S	95_T	0.644	0.97
152_E	191_L	0.644	0.97
450_Y	454_H	0.644	0.97
88_R	118_A	0.643	0.96
201_S	216_F	0.643	0.96
534_I	537_G	0.642	0.96
469_F	482_L	0.641	0.96
409_F	414_V	0.640	0.96
26_F	107_Y	0.639	0.96
387_M	450_Y	0.639	0.96
423_V	428_S	0.639	0.96
358_P	361_T	0.639	0.96
326_N	330_V	0.636	0.96
25_L	29_H	0.636	0.96
50_E	68_H	0.635	0.96
45_A	74_G	0.634	0.96
295_L	340_M	0.633	0.96
291_I	335_K	0.632	0.96
254_M	257_G	0.630	0.96
336_L	341_R	0.630	0.96
82_G	85_E	0.630	0.96
51_V	91_Y	0.629	0.96
530_I	555_Y	0.629	0.96
143_L	146_K	0.629	0.96
486_P	490_K	0.627	0.96
432_K	435_G	0.627	0.96
517_S	521_I	0.627	0.96
565_F	568_Y	0.627	0.96
364_V	368_G	0.626	0.96
352_E	420_D	0.623	0.96
308_V	349_M	0.622	0.96
258_E	267_R	0.622	0.96
145_E	148_V	0.621	0.96
184_G	500_R	0.620	0.96
518_F	522_D	0.620	0.96
364_V	367_G	0.620	0.96
362_G	365_E	0.619	0.96
196_H	206_G	0.619	0.96
54_A	90_K	0.619	0.96
105_D	108_A	0.617	0.96
361_T	365_E	0.617	0.96
386_Y	550_F	0.617	0.96
532_S	535_R	0.616	0.96
197_P	207_T	0.616	0.96
29_H	40_E	0.616	0.96
244_H	352_E	0.615	0.95
394_R	398_H	0.615	0.95
332_F	337_N	0.615	0.95
188_I	236_V	0.614	0.95
161_H	171_E	0.614	0.95
493_V	578_T	0.614	0.95
129_W	302_H	0.613	0.95
497_D	572_L	0.613	0.95
227_D	302_H	0.613	0.95
145_E	348_M	0.613	0.95
244_H	420_D	0.611	0.95
555_Y	558_Y	0.611	0.95
162_S	176_L	0.610	0.95
500_R	503_Q	0.609	0.95
244_H	419_H	0.608	0.95
213_T	216_F	0.608	0.95
496_Q	499_L	0.607	0.95
161_H	477_Q	0.606	0.95
245_F	263_Y	0.606	0.95
476_E	480_W	0.606	0.95
103_K	106_P	0.606	0.95
169_Y	193_V	0.604	0.95
487_M	490_K	0.604	0.95
218_P	224_K	0.604	0.95
252_L	257_G	0.603	0.95
185_F	465_E	0.602	0.95
309_D	419_H	0.601	0.95
178_P	228_E	0.599	0.95
373_Y	513_H	0.596	0.95
517_S	523_V	0.596	0.95
133_K	137_K	0.596	0.95
45_A	48_A	0.596	0.95
181_K	233_N	0.595	0.95
531_F	535_R	0.595	0.95
158_W	180_I	0.594	0.95
338_Q	341_R	0.592	0.94
409_F	413_F	0.591	0.94
430_L	467_A	0.590	0.94
151_Y	183_H	0.589	0.94
180_I	229_C	0.588	0.94
374_K	377_M	0.588	0.94
205_Q	276_T	0.588	0.94
172_L	188_I	0.587	0.94
239_D	309_D	0.586	0.94
22_S	292_S	0.586	0.94
65_H	69_R	0.585	0.94
244_H	307_R	0.585	0.94
176_L	179_Y	0.585	0.94
511_H	538_Q	0.581	0.94
200_R	474_D	0.581	0.94
38_G	81_P	0.580	0.94
262_E	267_R	0.579	0.94
68_H	78_L	0.579	0.94
444_Y	448_L	0.577	0.94
119_S	122_Y	0.577	0.94
205_Q	246_C	0.577	0.94
179_Y	182_K	0.577	0.94
451_M	454_H	0.576	0.94
250_H	254_M	0.575	0.94
400_L	403_F	0.575	0.94
245_F	261_Y	0.574	0.94
251_G	254_M	0.574	0.94
541_G	544_L	0.574	0.94
177_I	181_K	0.574	0.94
181_K	234_I	0.573	0.93
468_Q	478_L	0.573	0.93
135_Q	231_Q	0.573	0.93
117_T	124_L	0.572	0.93
402_S	406_L	0.571	0.93
119_S	126_G	0.570	0.93
467_A	488_H	0.567	0.93
167_Y	170_K	0.567	0.93
223_M	296_Y	0.567	0.93
453_V	501_F	0.566	0.93
379_W	382_D	0.566	0.93
408_A	411_E	0.565	0.93
143_L	147_P	0.564	0.93
506_K	510_E	0.564	0.93
114_R	166_H	0.564	0.93
441_F	467_A	0.563	0.93
398_H	403_F	0.562	0.93
518_F	535_R	0.561	0.93
243_G	310_A	0.561	0.93
516_Q	523_V	0.559	0.93
307_R	352_E	0.557	0.92
191_L	462_M	0.557	0.92
199_D	246_C	0.557	0.92
56_D	60_W	0.555	0.92
274_W	310_A	0.554	0.92
336_L	342_E	0.553	0.92
430_L	433_M	0.553	0.92
201_S	205_Q	0.552	0.92
66_V	76_W	0.552	0.92
431_N	436_D	0.551	0.92
241_V	352_E	0.551	0.92
547_I	558_Y	0.550	0.92
485_F	492_S	0.550	0.92
397_C	548_C	0.547	0.92
272_W	313_N	0.547	0.92
398_H	401_I	0.547	0.92
251_G	257_G	0.546	0.92
196_H	216_F	0.546	0.92
114_R	214_S	0.546	0.92
326_N	333_L	0.545	0.92
429_L	432_K	0.545	0.92
54_A	62_G	0.545	0.92
279_F	289_F	0.545	0.92
207_T	246_C	0.544	0.92
110_Y	214_S	0.542	0.91
181_K	503_Q	0.542	0.91
161_H	164_G	0.542	0.91
399_Q	405_L	0.540	0.91
397_C	402_S	0.540	0.91
430_L	469_F	0.540	0.91
136_K	302_H	0.539	0.91
210_Y	242_P	0.538	0.91
166_H	171_E	0.537	0.91
340_M	344_Y	0.537	0.91
167_Y	174_Q	0.537	0.91
336_L	340_M	0.536	0.91
259_P	266_E	0.536	0.91
337_N	340_M	0.535	0.91
289_F	293_N	0.535	0.91
298_A	343_A	0.534	0.91
530_I	533_F	0.534	0.91
150_I	187_H	0.534	0.91
329_A	334_K	0.534	0.91
263_Y	280_D	0.533	0.91
457_K	512_D	0.533	0.91
545_V	562_V	0.533	0.91
430_L	434_P	0.533	0.91
466_F	482_L	0.533	0.91
239_D	307_R	0.532	0.91
385_K	393_E	0.532	0.91
41_F	80_I	0.531	0.91
241_V	244_H	0.531	0.91
398_H	404_S	0.531	0.91
120_L	124_L	0.531	0.91
326_N	331_D	0.531	0.91
307_R	419_H	0.531	0.91
44_W	283_K	0.530	0.91
495_T	499_L	0.530	0.91
271_N	274_W	0.530	0.91
94_V	99_E	0.529	0.90
119_S	124_L	0.529	0.90
116_N	120_L	0.528	0.90
198_Y	215_R	0.525	0.90
327_P	330_V	0.524	0.90
433_M	443_Q	0.520	0.90
394_R	403_F	0.520	0.90
133_K	227_D	0.519	0.90
235_G	348_M	0.518	0.90
145_E	538_Q	0.518	0.90
383_V	397_C	0.517	0.89
204_Y	419_H	0.517	0.89
374_K	378_G	0.517	0.89
290_L	314_I	0.516	0.89
273_L	278_N	0.516	0.89
112_E	120_L	0.516	0.89
153_L	190_L	0.516	0.89
154_H	216_F	0.515	0.89
533_F	548_C	0.515	0.89
171_E	174_Q	0.514	0.89
523_V	531_F	0.514	0.89
435_G	439_Q	0.513	0.89
333_L	337_N	0.513	0.89
259_P	268_D	0.513	0.89
522_D	532_S	0.510	0.89
160_K	166_H	0.509	0.89
241_V	309_D	0.509	0.89
327_P	331_D	0.507	0.89
408_A	414_V	0.506	0.88
470_D	476_E	0.504	0.88
312_A	354_S	0.504	0.88
266_E	271_N	0.504	0.88
380_M	385_K	0.504	0.88
538_Q	541_G	0.504	0.88
287_H	291_I	0.503	0.88
272_W	277_A	0.503	0.88
533_F	537_G	0.503	0.88
229_C	232_Q	0.503	0.88
360_V	369_L	0.502	0.88
134_W	227_D	0.501	0.88
146_K	509_Y	0.501	0.88
441_F	487_M	0.501	0.88
394_R	400_L	0.501	0.88
458_K	502_Y	0.501	0.88
265_E	269_R	0.501	0.88
179_Y	183_H	0.501	0.88
184_G	503_Q	0.500	0.88
521_I	532_S	0.500	0.88
397_C	403_F	0.500	0.88
431_N	434_P	0.500	0.88

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3k1dA	1	0.9761	100	0.226	Contact Map
1m7xA	1	0.9362	100	0.25	Contact Map
3amlA	1	0.9569	100	0.272	Contact Map
4bzyA	1	0.949	100	0.275	Contact Map
3wdhA	1	0.8931	100	0.325	Contact Map
2e8yA	1	0.8995	100	0.327	Contact Map
2wanA	1	0.9059	100	0.336	Contact Map
1bf2A	1	0.9155	100	0.339	Contact Map
1wzlA	2	0.8533	100	0.342	Contact Map
1ji1A	1	0.8724	100	0.347	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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