PBPF - BACSU - GREMLIN Contacts

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PBPF - Penicillin-binding protein 1F

UniProt:	P38050	Sequences: MFKIKKKKLFIPIIILVLTAFLALIGYISIIFLGHYVIDEKKLILHASSKIVDQNGDEVASLYTENREPVSINEIPKQVREAFIAVEDKRFYEHHGIDAKSVGRAVYRDILAGGKVEGGSTITQQLAKNIFLTHDKTFLRKTKEVIIAINLERDYSKDKLLEMYLNQLYFGHGVYGIQAASHYYFNKEVKDLTVSEGAVLAAIPKAPSTYSPILHPDKNKERRDTILGMMNDQGYISAKEAVTAQGRTLGLHVKKQSETPWFDSYIDLVIKEAEDKYSISGEQLLQGGYTIKVPLDSKLQKTAYQVMKEGSYYPGTDQNAEGSAVFINNKTGGVEAAIGGRDYTSKGYNRVTAVRQPGSTFKPLAVYGPAMQEKKFKPYSLLKDELQSYGDYTPKNYDSRYEGEVTMSDAITYSKNAPAVWTLNEIGVETGKSYLKANGIDIPDEGLALALGGLEKGVSPLQLAGAFHTFAANGTYTEPFFISSIIDEDGETIADHKEEGKRVFSKQTSWNMTRMLQQVVKKGTATSGTYHGDLAGKTGSTSYTGVSGATKDAWFAGYTPKITGAVWMGYDKTDQNHYLKAGSSYPTRLFKDILTQAGETGHVFTKPKNVKELESPIELKPVKTLTADYTFKAAGLFTIELKWDAQEDDRAVYRIYVNKDGEETLLDSVEGKGSYEIPYANLFSGASYKIVPYNTQTKREGEGTDYVQPKLFSS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	714 (603)
Sequences:	8559 (5861)
Seq/√Len:	238.7

ECOLI - PBPB PBPC PBPA
BACSU - PBPF PBPA PBPG PBPD YQGF PBPH PBPB SP5D

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
187_K	196_E	4.882	1.00
178_Q	188_E	4.142	1.00
238_A	242_V	4.061	1.00
231_N	241_A	3.891	1.00
237_S	240_E	3.864	1.00
464_A	565_A	3.754	1.00
556_A	565_A	3.465	1.00
487_D	491_E	3.295	1.00
405_V	415_K	3.266	1.00
326_F	564_G	3.249	1.00
77_K	81_E	3.236	1.00
326_F	593_I	3.089	1.00
220_K	224_D	3.068	1.00
307_M	322_G	2.908	1.00
231_N	238_A	2.901	1.00
475_T	502_R	2.896	1.00
513_T	558_Y	2.778	1.00
79_V	177_I	2.688	1.00
265_Y	294_P	2.678	1.00
178_Q	189_V	2.584	1.00
92_Y	158_D	2.536	1.00
228_G	245_Q	2.485	1.00
329_N	563_T	2.434	1.00
90_R	98_D	2.402	1.00
81_E	235_Y	2.399	1.00
54_Q	296_D	2.396	1.00
388_S	393_T	2.393	1.00
101_S	104_R	2.381	1.00
156_S	159_K	2.371	1.00
241_A	245_Q	2.343	1.00
52_V	290_T	2.324	1.00
77_K	80_R	2.291	1.00
53_D	57_D	2.288	1.00
71_S	74_E	2.286	1.00
195_S	247_R	2.267	1.00
72_I	80_R	2.264	1.00
409_D	413_Y	2.242	1.00
328_N	331_T	2.229	1.00
324_A	593_I	2.224	1.00
194_V	236_I	2.172	1.00
408_S	514_R	2.123	1.00
333_G	483_S	2.111	1.00
80_R	158_D	2.101	1.00
333_G	480_F	2.097	1.00
72_I	162_E	2.081	1.00
86_V	225_T	2.069	1.00
334_V	481_F	2.063	1.00
50_K	58_E	2.060	1.00
465_G	479_P	2.044	1.00
292_K	484_S	2.043	1.00
76_P	189_V	2.027	1.00
303_A	324_A	1.984	1.00
408_S	518_Q	1.975	1.00
199_V	219_N	1.964	1.00
72_I	158_D	1.957	1.00
309_E	592_D	1.952	1.00
78_Q	197_G	1.946	1.00
465_G	476_Y	1.931	1.00
108_R	117_E	1.920	1.00
89_K	229_M	1.918	1.00
350_R	571_D	1.918	1.00
74_E	190_K	1.884	1.00
328_N	335_E	1.881	1.00
369_P	434_Y	1.881	1.00
335_E	562_I	1.876	1.00
78_Q	81_E	1.855	1.00
514_R	517_Q	1.851	1.00
83_F	201_A	1.799	1.00
174_V	183_Y	1.798	1.00
470_F	512_M	1.796	1.00
364_L	466_A	1.794	1.00
357_P	458_V	1.791	1.00
194_V	244_A	1.784	1.00
402_E	415_K	1.783	1.00
206_A	209_T	1.777	1.00
94_H	152_E	1.769	1.00
228_G	241_A	1.768	1.00
473_N	510_W	1.752	1.00
397_Y	581_A	1.742	1.00
460_P	565_A	1.737	1.00
372_Q	437_A	1.737	1.00
381_L	404_E	1.724	1.00
366_V	450_A	1.723	1.00
463_L	556_A	1.718	1.00
50_K	290_T	1.710	1.00
86_V	229_M	1.707	1.00
229_M	232_D	1.703	1.00
299_L	597_A	1.697	1.00
378_P	515_M	1.696	1.00
227_L	241_A	1.689	1.00
52_V	292_K	1.688	1.00
79_V	197_G	1.687	1.00
378_P	511_N	1.685	1.00
361_F	435_L	1.684	1.00
325_V	460_P	1.682	1.00
89_K	233_Q	1.676	1.00
188_E	191_D	1.670	1.00
328_N	333_G	1.669	1.00
423_L	431_G	1.665	1.00
325_V	461_L	1.659	1.00
85_A	235_Y	1.657	1.00
433_S	437_A	1.643	1.00
290_T	486_I	1.631	1.00
84_I	92_Y	1.625	1.00
371_M	515_M	1.620	1.00
83_F	170_F	1.613	1.00
127_A	151_L	1.609	1.00
229_M	233_Q	1.600	1.00
382_L	425_E	1.599	1.00
507_Q	609_N	1.587	1.00
363_P	470_F	1.586	1.00
301_K	305_Q	1.584	1.00
590_F	594_L	1.582	1.00
337_A	349_N	1.575	1.00
85_A	233_Q	1.573	1.00
54_Q	335_E	1.573	1.00
268_L	481_F	1.571	1.00
510_W	607_P	1.566	1.00
591_K	595_T	1.546	1.00
535_A	558_Y	1.542	1.00
533_D	601_G	1.538	1.00
536_G	555_F	1.538	1.00
104_R	117_E	1.533	1.00
79_V	83_F	1.528	1.00
327_I	464_A	1.520	1.00
215_H	218_K	1.518	1.00
374_K	430_T	1.513	1.00
231_N	236_I	1.488	1.00
504_F	509_S	1.487	1.00
83_F	204_P	1.481	1.00
299_L	335_E	1.477	1.00
360_T	463_L	1.477	1.00
324_A	564_G	1.475	1.00
182_H	186_N	1.475	1.00
368_G	470_F	1.473	1.00
169_Y	173_G	1.464	1.00
412_T	518_Q	1.446	1.00
155_Y	163_M	1.444	1.00
70_V	75_I	1.442	1.00
302_T	596_Q	1.435	1.00
430_T	433_S	1.434	1.00
168_L	204_P	1.432	1.00
57_D	297_S	1.432	1.00
518_Q	522_K	1.424	1.00
112_A	116_V	1.423	1.00
80_R	92_Y	1.410	1.00
368_G	508_T	1.408	1.00
192_L	197_G	1.408	1.00
561_K	602_H	1.406	1.00
82_A	230_M	1.397	1.00
492_T	495_D	1.395	1.00
193_T	247_R	1.392	1.00
410_A	418_P	1.390	1.00
423_L	428_V	1.390	1.00
72_I	75_I	1.389	1.00
349_N	352_T	1.386	1.00
534_L	559_T	1.376	1.00
72_I	92_Y	1.367	1.00
138_F	142_T	1.366	1.00
368_G	504_F	1.361	1.00
170_F	177_I	1.360	1.00
228_G	232_D	1.356	1.00
434_Y	438_N	1.355	1.00
348_Y	353_A	1.355	1.00
409_D	412_T	1.351	1.00
468_H	563_T	1.347	1.00
395_K	399_S	1.345	1.00
398_D	402_E	1.343	1.00
407_M	422_T	1.337	1.00
442_I	462_Q	1.335	1.00
520_V	534_L	1.334	1.00
159_K	162_E	1.332	1.00
217_D	221_E	1.331	1.00
305_Q	596_Q	1.325	1.00
265_Y	295_L	1.318	1.00
486_I	492_T	1.309	1.00
502_R	506_K	1.308	1.00
484_S	495_D	1.308	1.00
564_G	593_I	1.306	1.00
477_T	500_G	1.304	1.00
90_R	93_E	1.302	1.00
303_A	593_I	1.297	1.00
75_I	79_V	1.294	1.00
302_T	306_V	1.292	1.00
372_Q	508_T	1.281	1.00
195_S	244_A	1.277	1.00
424_N	447_L	1.276	1.00
383_K	404_E	1.274	1.00
568_M	589_L	1.269	1.00
236_I	241_A	1.265	1.00
267_D	270_I	1.264	1.00
97_I	145_V	1.264	1.00
238_A	241_A	1.263	1.00
103_G	106_V	1.260	1.00
242_V	246_G	1.259	1.00
330_K	561_K	1.258	1.00
71_S	162_E	1.257	1.00
368_G	512_M	1.257	1.00
78_Q	194_V	1.255	1.00
371_M	511_N	1.254	1.00
476_Y	501_K	1.253	1.00
415_K	418_P	1.246	1.00
224_D	245_Q	1.243	1.00
242_V	245_Q	1.239	1.00
231_N	245_Q	1.238	1.00
98_D	101_S	1.238	1.00
473_N	506_K	1.235	1.00
372_Q	434_Y	1.232	1.00
382_L	418_P	1.231	1.00
324_A	566_V	1.230	1.00
218_K	221_E	1.229	1.00
470_F	558_Y	1.228	1.00
58_E	61_S	1.225	1.00
552_D	567_W	1.224	1.00
269_V	293_V	1.221	1.00
405_V	418_P	1.220	1.00
70_V	189_V	1.217	1.00
327_I	563_T	1.216	1.00
368_G	434_Y	1.216	1.00
364_L	435_L	1.215	1.00
406_T	409_D	1.211	1.00
216_P	220_K	1.208	1.00
126_L	163_M	1.208	1.00
75_I	80_R	1.208	1.00
305_Q	309_E	1.205	1.00
172_H	211_S	1.201	1.00
438_N	469_T	1.200	1.00
596_Q	599_E	1.195	1.00
306_V	592_D	1.189	1.00
239_K	243_T	1.188	1.00
370_A	422_T	1.187	1.00
303_A	338_I	1.186	1.00
376_F	425_E	1.186	1.00
299_L	336_A	1.184	1.00
557_G	590_F	1.183	1.00
307_M	324_A	1.182	1.00
304_Y	308_K	1.181	1.00
268_L	272_E	1.181	1.00
513_T	535_A	1.180	1.00
460_P	464_A	1.174	1.00
387_Q	421_W	1.170	1.00
423_L	450_A	1.169	1.00
517_Q	533_D	1.166	1.00
139_L	143_K	1.158	1.00
513_T	516_L	1.157	1.00
448_A	453_G	1.155	1.00
268_L	271_K	1.154	1.00
240_E	243_T	1.152	1.00
12_P	16_L	1.150	1.00
292_K	486_I	1.141	1.00
187_K	191_D	1.139	1.00
472_A	477_T	1.139	1.00
165_L	177_I	1.136	1.00
376_F	407_M	1.135	1.00
355_R	552_D	1.134	1.00
412_T	522_K	1.132	1.00
54_Q	333_G	1.131	1.00
119_G	128_K	1.128	1.00
525_A	528_G	1.127	1.00
407_M	515_M	1.124	1.00
209_T	218_K	1.124	1.00
464_A	556_A	1.122	1.00
534_L	590_F	1.121	1.00
521_K	529_T	1.119	1.00
194_V	227_L	1.115	1.00
440_I	458_V	1.113	1.00
289_Y	493_I	1.112	1.00
419_A	422_T	1.111	1.00
392_Y	420_V	1.105	1.00
364_L	438_N	1.101	1.00
564_G	594_L	1.100	1.00
533_D	603_V	1.096	1.00
109_D	115_K	1.095	1.00
53_D	297_S	1.090	1.00
429_E	445_E	1.088	1.00
417_A	421_W	1.084	1.00
90_R	94_H	1.081	1.00
356_Q	541_T	1.080	1.00
429_E	433_S	1.080	1.00
385_E	421_W	1.077	1.00
78_Q	240_E	1.070	1.00
262_F	265_Y	1.069	1.00
471_A	558_Y	1.065	1.00
79_V	165_L	1.064	1.00
83_F	165_L	1.062	1.00
437_A	501_K	1.060	1.00
568_M	586_P	1.060	1.00
372_Q	505_S	1.058	1.00
150_N	154_D	1.055	1.00
438_N	504_F	1.050	1.00
269_V	273_A	1.049	1.00
103_G	107_Y	1.049	1.00
304_Y	338_I	1.049	1.00
475_T	500_G	1.046	1.00
102_V	124_Q	1.046	1.00
16_L	20_A	1.045	1.00
115_K	136_K	1.045	1.00
398_D	415_K	1.043	1.00
562_I	597_A	1.040	1.00
228_G	231_N	1.038	1.00
376_F	380_S	1.035	1.00
411_I	419_A	1.031	1.00
169_Y	175_Y	1.027	1.00
329_N	562_I	1.026	1.00
82_A	201_A	1.026	1.00
51_I	62_L	1.022	1.00
51_I	59_V	1.021	1.00
606_K	612_E	1.021	1.00
90_R	100_K	1.018	1.00
307_M	338_I	1.017	1.00
507_Q	610_V	1.014	1.00
423_L	449_L	1.012	1.00
325_V	337_A	1.011	1.00
357_P	361_F	1.011	1.00
434_Y	504_F	1.011	1.00
99_A	103_G	1.002	1.00
510_W	606_K	1.001	1.00
102_V	119_G	1.001	1.00
377_K	380_S	1.001	1.00
401_Y	417_A	0.999	1.00
195_S	223_R	0.996	1.00
268_L	337_A	0.995	1.00
277_Y	494_A	0.991	1.00
518_Q	521_K	0.984	1.00
178_Q	182_H	0.982	1.00
220_K	223_R	0.981	1.00
49_S	291_I	0.980	1.00
115_K	138_F	0.979	1.00
109_D	138_F	0.977	1.00
616_P	620_K	0.976	1.00
553_A	586_P	0.975	1.00
299_L	593_I	0.974	1.00
243_T	247_R	0.974	1.00
106_V	109_D	0.973	1.00
371_M	512_M	0.972	1.00
294_P	333_G	0.965	1.00
202_A	219_N	0.962	1.00
56_G	483_S	0.960	1.00
434_Y	437_A	0.960	1.00
108_R	116_V	0.958	1.00
615_S	620_K	0.956	1.00
112_A	115_K	0.955	1.00
517_Q	603_V	0.954	1.00
470_F	513_T	0.949	1.00
27_Y	31_I	0.949	1.00
205_K	210_Y	0.948	1.00
30_I	34_G	0.947	1.00
325_V	464_A	0.945	1.00
367_Y	419_A	0.944	1.00
273_A	485_I	0.942	1.00
265_Y	481_F	0.942	1.00
509_S	512_M	0.942	1.00
520_V	525_A	0.940	1.00
310_G	592_D	0.938	1.00
459_S	462_Q	0.934	1.00
72_I	161_L	0.932	1.00
519_V	525_A	0.931	1.00
433_S	436_K	0.929	1.00
142_T	146_I	0.929	1.00
150_N	153_R	0.929	1.00
484_S	492_T	0.928	1.00
382_L	422_T	0.927	1.00
81_E	92_Y	0.927	1.00
376_F	422_T	0.926	1.00
382_L	407_M	0.926	1.00
426_I	430_T	0.924	1.00
620_K	623_K	0.924	1.00
127_A	131_F	0.923	1.00
123_T	152_E	0.922	1.00
616_P	619_L	0.922	1.00
84_I	235_Y	0.921	1.00
327_I	479_P	0.919	1.00
384_D	401_Y	0.919	1.00
432_K	436_K	0.917	1.00
122_I	168_L	0.915	1.00
52_V	58_E	0.913	1.00
88_D	94_H	0.913	1.00
310_G	589_L	0.912	1.00
480_F	496_H	0.911	1.00
152_E	160_L	0.908	1.00
268_L	334_V	0.902	1.00
469_T	476_Y	0.901	1.00
128_K	134_H	0.900	1.00
109_D	112_A	0.900	1.00
272_E	276_K	0.900	1.00
460_P	554_W	0.898	1.00
86_V	222_R	0.897	1.00
69_P	162_E	0.896	1.00
366_V	431_G	0.896	1.00
426_I	431_G	0.894	1.00
592_D	596_Q	0.894	1.00
368_G	438_N	0.893	1.00
189_V	192_L	0.892	1.00
583_S	587_T	0.892	1.00
303_A	336_A	0.889	0.99
57_D	298_K	0.889	0.99
509_S	513_T	0.887	0.99
417_A	420_V	0.887	0.99
76_P	79_V	0.886	0.99
357_P	454_L	0.886	0.99
384_D	403_G	0.886	0.99
405_V	410_A	0.885	0.99
444_D	454_L	0.885	0.99
80_R	161_L	0.882	0.99
360_T	556_A	0.881	0.99
402_E	413_Y	0.880	0.99
411_I	515_M	0.876	0.99
383_K	421_W	0.876	0.99
102_V	145_V	0.874	0.99
322_G	589_L	0.874	0.99
152_E	157_K	0.874	0.99
99_A	102_V	0.873	0.99
261_W	264_S	0.869	0.99
522_K	526_T	0.868	0.99
420_V	451_L	0.868	0.99
520_V	555_F	0.864	0.99
566_V	589_L	0.863	0.99
326_F	562_I	0.861	0.99
86_V	205_K	0.860	0.99
402_E	405_V	0.860	0.99
526_T	529_T	0.859	0.99
427_G	430_T	0.858	0.99
283_Q	287_G	0.856	0.99
342_D	345_S	0.856	0.99
423_L	447_L	0.856	0.99
517_Q	521_K	0.853	0.99
432_K	445_E	0.853	0.99
26_G	30_I	0.853	0.99
129_N	168_L	0.853	0.99
68_E	178_Q	0.851	0.99
172_H	183_Y	0.848	0.99
95_H	99_A	0.843	0.99
296_D	299_L	0.843	0.99
334_V	461_L	0.839	0.99
297_S	301_K	0.839	0.99
292_K	483_S	0.838	0.99
217_D	220_K	0.835	0.99
299_L	326_F	0.835	0.99
560_P	604_F	0.834	0.99
368_G	509_S	0.833	0.99
76_P	197_G	0.831	0.99
432_K	449_L	0.830	0.99
458_V	463_L	0.830	0.99
70_V	178_Q	0.830	0.99
553_A	582_G	0.828	0.99
109_D	117_E	0.826	0.99
68_E	182_H	0.826	0.99
199_V	223_R	0.824	0.99
267_D	343_Y	0.823	0.99
615_S	623_K	0.821	0.99
619_L	622_V	0.820	0.99
513_T	604_F	0.820	0.99
264_S	267_D	0.819	0.99
273_A	291_I	0.818	0.99
551_K	573_T	0.811	0.99
329_N	471_A	0.810	0.99
384_D	402_E	0.809	0.99
369_P	431_G	0.808	0.99
199_V	202_A	0.808	0.99
438_N	466_A	0.808	0.99
109_D	119_G	0.807	0.99
325_V	351_V	0.807	0.99
206_A	210_Y	0.806	0.99
460_P	556_A	0.805	0.99
386_L	401_Y	0.804	0.99
83_F	177_I	0.803	0.99
186_N	252_H	0.802	0.99
11_I	15_I	0.801	0.99
382_L	421_W	0.801	0.99
337_A	351_V	0.801	0.99
371_M	508_T	0.799	0.99
30_I	33_L	0.797	0.99
464_A	563_T	0.797	0.99
80_R	84_I	0.797	0.99
263_D	266_I	0.796	0.99
328_N	561_K	0.796	0.99
593_I	597_A	0.794	0.99
321_E	350_R	0.793	0.99
294_P	480_F	0.793	0.99
231_N	242_V	0.792	0.99
516_L	558_Y	0.792	0.99
363_P	366_V	0.792	0.99
511_N	610_V	0.791	0.99
124_Q	144_E	0.790	0.99
363_P	411_I	0.790	0.99
357_P	453_G	0.790	0.99
33_L	36_Y	0.786	0.99
337_A	481_F	0.786	0.99
129_N	167_Q	0.785	0.99
20_A	24_L	0.785	0.99
32_F	36_Y	0.783	0.99
520_V	536_G	0.782	0.99
525_A	555_F	0.779	0.99
508_T	512_M	0.779	0.99
240_E	244_A	0.777	0.99
236_I	240_E	0.777	0.99
441_D	462_Q	0.777	0.99
264_S	340_G	0.775	0.99
505_S	508_T	0.775	0.99
182_H	188_E	0.772	0.99
594_L	598_G	0.771	0.99
476_Y	503_V	0.770	0.99
75_I	177_I	0.770	0.99
329_N	468_H	0.770	0.99
470_F	504_F	0.769	0.99
542_S	549_A	0.768	0.99
205_K	209_T	0.768	0.99
193_T	197_G	0.765	0.98
294_P	483_S	0.762	0.98
323_S	350_R	0.762	0.98
97_I	149_I	0.760	0.98
247_R	250_G	0.759	0.98
177_I	200_L	0.759	0.98
95_H	149_I	0.756	0.98
261_W	265_Y	0.756	0.98
28_I	32_F	0.754	0.98
239_K	242_V	0.754	0.98
510_W	610_V	0.753	0.98
138_F	145_V	0.753	0.98
273_A	289_Y	0.752	0.98
395_K	401_Y	0.751	0.98
83_F	122_I	0.751	0.98
370_A	376_F	0.750	0.98
428_V	445_E	0.749	0.98
576_N	579_L	0.748	0.98
528_G	587_T	0.746	0.98
367_Y	411_I	0.746	0.98
262_F	266_I	0.739	0.98
105_A	109_D	0.738	0.98
55_N	297_S	0.738	0.98
108_R	112_A	0.737	0.98
478_E	499_E	0.736	0.98
354_V	462_Q	0.735	0.98
181_S	197_G	0.735	0.98
436_K	443_P	0.733	0.98
357_P	463_L	0.732	0.98
376_F	382_L	0.727	0.98
189_V	197_G	0.727	0.98
186_N	254_K	0.726	0.98
47_A	69_P	0.725	0.98
99_A	149_I	0.725	0.98
23_A	27_Y	0.725	0.98
364_L	463_L	0.723	0.98
19_T	23_A	0.722	0.98
430_T	434_Y	0.721	0.98
340_G	350_R	0.720	0.98
132_L	140_R	0.720	0.98
396_N	401_Y	0.719	0.98
553_A	580_K	0.718	0.98
9_L	12_P	0.716	0.98
471_A	535_A	0.716	0.98
84_I	161_L	0.716	0.98
553_A	585_Y	0.716	0.98
615_S	619_L	0.714	0.98
220_K	249_L	0.713	0.98
465_G	478_E	0.712	0.98
321_E	345_S	0.711	0.98
366_V	451_L	0.711	0.98
558_Y	563_T	0.708	0.97
323_S	460_P	0.707	0.97
50_K	61_S	0.707	0.97
274_E	281_G	0.707	0.97
331_T	480_F	0.706	0.97
514_R	518_Q	0.706	0.97
564_G	590_F	0.706	0.97
440_I	466_A	0.706	0.97
225_T	228_G	0.705	0.97
528_G	591_K	0.705	0.97
552_D	569_G	0.704	0.97
446_G	453_G	0.700	0.97
436_K	441_D	0.700	0.97
79_V	192_L	0.699	0.97
301_K	304_Y	0.699	0.97
463_L	554_W	0.698	0.97
506_K	609_N	0.698	0.97
169_Y	174_V	0.696	0.97
202_A	226_I	0.696	0.97
107_Y	111_L	0.696	0.97
327_I	468_H	0.695	0.97
504_F	508_T	0.694	0.97
302_T	305_Q	0.693	0.97
566_V	590_F	0.693	0.97
272_E	482_I	0.692	0.97
520_V	528_G	0.690	0.97
358_G	541_T	0.688	0.97
74_E	178_Q	0.686	0.97
75_I	78_Q	0.685	0.97
32_F	35_H	0.685	0.97
56_G	292_K	0.684	0.97
299_L	302_T	0.683	0.97
519_V	555_F	0.682	0.97
194_V	197_G	0.681	0.97
371_M	378_P	0.680	0.97
23_A	26_G	0.678	0.97
225_T	229_M	0.678	0.97
613_L	622_V	0.677	0.97
27_Y	30_I	0.676	0.97
369_P	426_I	0.676	0.97
487_D	490_G	0.674	0.97
83_F	168_L	0.672	0.97
194_V	230_M	0.671	0.97
267_D	271_K	0.669	0.96
582_G	586_P	0.669	0.96
37_V	40_E	0.668	0.96
306_V	589_L	0.668	0.96
109_D	145_V	0.667	0.96
541_T	551_K	0.666	0.96
379_Y	408_S	0.664	0.96
60_A	266_I	0.664	0.96
82_A	235_Y	0.663	0.96
123_T	148_A	0.663	0.96
244_A	247_R	0.663	0.96
178_Q	190_K	0.661	0.96
594_L	597_A	0.661	0.96
435_L	439_G	0.660	0.96
531_H	595_T	0.660	0.96
389_Y	447_L	0.660	0.96
155_Y	159_K	0.656	0.96
449_L	454_L	0.655	0.96
132_L	147_I	0.654	0.96
482_I	485_I	0.654	0.96
205_K	226_I	0.651	0.96
187_K	193_T	0.651	0.96
32_F	37_V	0.651	0.96
321_E	571_D	0.650	0.96
22_L	26_G	0.650	0.96
527_S	588_R	0.650	0.96
262_F	297_S	0.649	0.96
371_M	376_F	0.649	0.96
366_V	419_A	0.648	0.96
202_A	225_T	0.648	0.96
517_Q	520_V	0.648	0.96
97_I	102_V	0.647	0.96
278_S	281_G	0.646	0.96
247_R	251_L	0.645	0.96
516_L	535_A	0.645	0.96
405_V	409_D	0.644	0.96
223_R	249_L	0.644	0.96
412_T	519_V	0.643	0.96
298_K	301_K	0.643	0.96
260_P	266_I	0.643	0.96
248_T	251_L	0.643	0.96
485_I	494_A	0.642	0.96
108_R	115_K	0.642	0.96
52_V	56_G	0.640	0.95
272_E	275_D	0.638	0.95
384_D	415_K	0.637	0.95
73_N	158_D	0.637	0.95
438_N	503_V	0.636	0.95
303_A	326_F	0.636	0.95
201_A	204_P	0.635	0.95
469_T	504_F	0.635	0.95
79_V	189_V	0.635	0.95
337_A	352_T	0.635	0.95
298_K	302_T	0.634	0.95
72_I	84_I	0.633	0.95
71_S	75_I	0.632	0.95
177_I	189_V	0.631	0.95
566_V	586_P	0.631	0.95
127_A	147_I	0.631	0.95
86_V	233_Q	0.630	0.95
86_V	201_A	0.630	0.95
170_F	204_P	0.630	0.95
135_D	140_R	0.628	0.95
265_Y	268_L	0.627	0.95
223_R	248_T	0.627	0.95
519_V	536_G	0.626	0.95
231_N	234_G	0.626	0.95
558_Y	594_L	0.625	0.95
199_V	212_P	0.625	0.95
435_L	440_I	0.624	0.95
607_P	610_V	0.624	0.95
296_D	335_E	0.622	0.95
128_K	140_R	0.621	0.95
15_I	18_L	0.621	0.95
48_S	61_S	0.620	0.95
132_L	135_D	0.616	0.94
265_Y	272_E	0.616	0.94
205_K	225_T	0.615	0.94
512_M	516_L	0.615	0.94
366_V	423_L	0.614	0.94
570_Y	574_D	0.613	0.94
14_I	18_L	0.612	0.94
116_V	136_K	0.612	0.94
86_V	204_P	0.611	0.94
371_M	407_M	0.610	0.94
109_D	136_K	0.608	0.94
387_Q	424_N	0.608	0.94
559_T	598_G	0.606	0.94
278_S	283_Q	0.606	0.94
35_H	38_I	0.605	0.94
473_N	605_T	0.605	0.94
128_K	136_K	0.605	0.94
13_I	17_V	0.604	0.94
106_V	138_F	0.604	0.94
553_A	583_S	0.600	0.94
306_V	596_Q	0.600	0.94
562_I	598_G	0.600	0.94
236_I	244_A	0.600	0.94
29_S	33_L	0.598	0.94
329_N	560_P	0.598	0.94
161_L	165_L	0.597	0.93
25_I	29_S	0.597	0.93
354_V	459_S	0.596	0.93
505_S	509_S	0.596	0.93
185_F	199_V	0.596	0.93
30_I	36_Y	0.596	0.93
525_A	529_T	0.595	0.93
615_S	622_V	0.595	0.93
468_H	477_T	0.595	0.93
408_S	515_M	0.592	0.93
388_S	391_D	0.591	0.93
419_A	450_A	0.591	0.93
312_Y	341_R	0.590	0.93
461_L	464_A	0.590	0.93
46_H	65_E	0.588	0.93
10_F	13_I	0.588	0.93
36_Y	40_E	0.588	0.93
447_L	453_G	0.588	0.93
171_G	184_Y	0.588	0.93
469_T	503_V	0.587	0.93
101_S	117_E	0.586	0.93
145_V	148_A	0.585	0.93
550_T	553_A	0.585	0.93
13_I	20_A	0.584	0.93
264_S	269_V	0.583	0.93
108_R	111_L	0.582	0.93
223_R	251_L	0.582	0.93
106_V	110_I	0.581	0.93
319_N	570_Y	0.581	0.93
559_T	594_L	0.581	0.93
264_S	268_L	0.580	0.92
463_L	565_A	0.579	0.92
321_E	340_G	0.579	0.92
402_E	409_D	0.579	0.92
227_L	244_A	0.578	0.92
264_S	273_A	0.578	0.92
557_G	594_L	0.577	0.92
260_P	263_D	0.577	0.92
205_K	222_R	0.577	0.92
616_P	622_V	0.577	0.92
359_S	362_K	0.574	0.92
348_Y	351_V	0.574	0.92
66_N	179_A	0.573	0.92
561_K	598_G	0.572	0.92
465_G	468_H	0.572	0.92
369_P	430_T	0.572	0.92
124_Q	128_K	0.571	0.92
124_Q	132_L	0.568	0.92
85_A	230_M	0.568	0.92
458_V	462_Q	0.568	0.92
435_L	466_A	0.568	0.92
524_T	555_F	0.568	0.92
197_G	204_P	0.567	0.92
181_S	192_L	0.566	0.92
92_Y	161_L	0.565	0.91
95_H	152_E	0.564	0.91
268_L	352_T	0.563	0.91
89_K	232_D	0.562	0.91
264_S	270_I	0.562	0.91
272_E	480_F	0.561	0.91
180_A	184_Y	0.560	0.91
90_R	152_E	0.559	0.91
530_Y	594_L	0.559	0.91
199_V	249_L	0.559	0.91
330_K	602_H	0.559	0.91
220_K	248_T	0.558	0.91
62_L	270_I	0.558	0.91
14_I	17_V	0.557	0.91
322_G	568_M	0.557	0.91
582_G	587_T	0.556	0.91
115_K	119_G	0.555	0.91
28_I	36_Y	0.554	0.91
461_L	481_F	0.554	0.91
471_A	563_T	0.554	0.91
330_K	472_A	0.553	0.91
355_R	567_W	0.552	0.91
397_Y	550_T	0.552	0.91
557_G	566_V	0.550	0.90
619_L	623_K	0.550	0.90
386_L	395_K	0.550	0.90
411_I	512_M	0.549	0.90
361_F	366_V	0.549	0.90
553_A	568_M	0.549	0.90
562_I	593_I	0.548	0.90
380_S	422_T	0.548	0.90
535_A	604_F	0.548	0.90
284_L	288_G	0.548	0.90
203_I	206_A	0.548	0.90
55_N	296_D	0.547	0.90
263_D	267_D	0.547	0.90
139_L	142_T	0.546	0.90
198_A	244_A	0.545	0.90
199_V	216_P	0.545	0.90
63_Y	66_N	0.545	0.90
555_F	590_F	0.544	0.90
172_H	213_I	0.543	0.90
11_I	20_A	0.543	0.90
520_V	529_T	0.543	0.90
276_K	494_A	0.542	0.90
367_Y	515_M	0.542	0.90
326_F	597_A	0.541	0.90
431_G	435_L	0.540	0.90
363_P	467_F	0.540	0.90
615_S	621_P	0.540	0.90
414_S	537_K	0.540	0.90
181_S	185_F	0.539	0.89
75_I	162_E	0.539	0.89
108_R	114_G	0.538	0.89
15_I	19_T	0.538	0.89
260_P	264_S	0.537	0.89
272_E	481_F	0.537	0.89
421_W	425_E	0.537	0.89
209_T	215_H	0.537	0.89
327_I	465_G	0.537	0.89
230_M	235_Y	0.536	0.89
75_I	83_F	0.536	0.89
111_L	115_K	0.536	0.89
525_A	587_T	0.536	0.89
406_T	412_T	0.535	0.89
519_V	523_G	0.534	0.89
23_A	30_I	0.534	0.89
113_G	117_E	0.534	0.89
31_I	142_T	0.534	0.89
102_V	138_F	0.533	0.89
362_K	416_N	0.533	0.89
541_T	552_D	0.532	0.89
181_S	189_V	0.531	0.89
310_G	588_R	0.530	0.89
519_V	524_T	0.530	0.89
72_I	76_P	0.530	0.89
278_S	282_E	0.529	0.89
513_T	517_Q	0.528	0.89
70_V	76_P	0.528	0.89
419_A	426_I	0.528	0.89
525_A	536_G	0.528	0.89
273_A	284_L	0.528	0.89
384_D	417_A	0.527	0.88
411_I	516_L	0.527	0.88
199_V	213_I	0.526	0.88
79_V	201_A	0.526	0.88
86_V	226_I	0.525	0.88
374_K	380_S	0.524	0.88
282_E	286_Q	0.524	0.88
130_I	163_M	0.523	0.88
295_L	481_F	0.523	0.88
418_P	421_W	0.523	0.88
616_P	623_K	0.523	0.88
381_L	406_T	0.522	0.88
386_L	393_T	0.522	0.88
140_R	144_E	0.521	0.88
55_N	298_K	0.520	0.88
348_Y	571_D	0.520	0.88
21_F	24_L	0.519	0.88
67_R	288_G	0.518	0.88
360_T	565_A	0.518	0.88
483_S	495_D	0.518	0.88
315_G	319_N	0.518	0.88
59_V	295_L	0.517	0.87
506_K	510_W	0.517	0.87
266_I	270_I	0.516	0.87
48_S	66_N	0.516	0.87
230_M	236_I	0.516	0.87
195_S	199_V	0.516	0.87
206_A	218_K	0.516	0.87
361_F	431_G	0.515	0.87
202_A	222_R	0.515	0.87
357_P	360_T	0.515	0.87
587_T	591_K	0.515	0.87
261_W	266_I	0.515	0.87
527_S	587_T	0.514	0.87
68_E	179_A	0.514	0.87
198_A	227_L	0.514	0.87
311_S	341_R	0.514	0.87
361_F	364_L	0.514	0.87
265_Y	270_I	0.514	0.87
515_M	518_Q	0.512	0.87
51_I	270_I	0.512	0.87
311_S	322_G	0.511	0.87
352_T	461_L	0.511	0.87
117_E	136_K	0.511	0.87
342_D	346_K	0.511	0.87
289_Y	485_I	0.510	0.87
530_Y	534_L	0.509	0.87
49_S	52_V	0.509	0.87
70_V	177_I	0.509	0.87
434_Y	508_T	0.508	0.87
36_Y	39_D	0.508	0.87
228_G	238_A	0.508	0.87
343_Y	346_K	0.507	0.86
512_M	515_M	0.506	0.86
470_F	516_L	0.505	0.86
9_L	13_I	0.504	0.86
100_K	103_G	0.503	0.86
269_V	274_E	0.502	0.86
349_N	355_R	0.502	0.86
25_I	28_I	0.502	0.86
116_V	119_G	0.502	0.86
28_I	31_I	0.502	0.86
102_V	106_V	0.501	0.86
392_Y	447_L	0.501	0.86
438_N	470_F	0.501	0.86
133_T	147_I	0.501	0.86
309_E	599_E	0.500	0.86

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
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HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4oonA	1	0.5308	100	0.171	Contact Map
3vmaA	1	0.8529	100	0.212	Contact Map
2jchA	1	0.584	100	0.218	Contact Map
3udfA	2	0.6765	100	0.222	Contact Map
2olvA	1	0.8151	100	0.254	Contact Map
3zg9B	1	0.619	100	0.423	Contact Map
2y2mA	2	0.6204	100	0.582	Contact Map
2v2fF	1	0.4888	100	0.644	Contact Map
3un7A	1	0.5042	100	0.644	Contact Map
2oqoA	2	0.2535	100	0.651	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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