ODB2 - BACSU - GREMLIN Contacts

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ODB2 - Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex

UniProt:	P37942	Sequences: MAIEQMTMPQLGESVTEGTISKWLVAPGDKVNKYDPIAEVMTDKVNAEVPSSFTGTITELVGEEGQTLQVGEMICKIETEGANPAEQKQEQPAASEAAENPVAKSAGAADQPNKKRYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQRLIETGGVQEQNPEELKTAAPAPKSASKPEPKEETSYPASAAGDKEIPVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYRNSIKDSFKKTEGFNLTFFAFFVKAVAQALKEFPQMNSMWAGDKIIQKKDINISIAVATEDSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNTGSFGSVQSMGIINYPQAAILQVESIVKRPVVMDNGMIAVRDMVNLCLSLDHRVLDGLVCGRFLGRVKQILESIDEKTSVY	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	424 (398)
Sequences:	7701 (4728)
Seq/√Len:	237.0

ECOLI - ODO2 ODP2
BACSU - ODB2 ODP2 ACOC ODO2
HALSA - Q9HN75

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
319_G	323_K	3.650	1.00
308_K	316_D	3.483	1.00
27_P	59_E	3.473	1.00
58_T	78_E	3.359	1.00
266_E	409_R	3.328	1.00
371_K	379_G	3.284	1.00
322_K	326_D	3.256	1.00
195_K	283_K	3.120	1.00
25_V	35_D	3.029	1.00
196_E	278_K	3.028	1.00
63_E	66_Q	2.941	1.00
323_K	333_D	2.788	1.00
375_V	381_I	2.679	1.00
316_D	319_G	2.630	1.00
128_H	153_I	2.612	1.00
273_M	282_K	2.571	1.00
59_E	76_K	2.549	1.00
225_E	372_R	2.533	1.00
267_F	409_R	2.511	1.00
257_V	287_I	2.498	1.00
205_A	208_S	2.495	1.00
131_D	134_Q	2.492	1.00
25_V	57_I	2.482	1.00
24_L	36_P	2.471	1.00
260_V	339_F	2.451	1.00
32_N	54_T	2.436	1.00
375_V	383_V	2.378	1.00
371_K	385_D	2.353	1.00
5_Q	76_K	2.319	1.00
284_D	304_N	2.248	1.00
197_I	281_Q	2.229	1.00
22_K	64_E	2.196	1.00
61_V	76_K	2.194	1.00
226_V	389_L	2.147	1.00
62_G	72_E	2.103	1.00
5_Q	73_M	2.081	1.00
30_K	56_T	2.064	1.00
308_K	312_G	2.026	1.00
376_M	382_A	2.004	1.00
227_D	384_R	2.002	1.00
219_H	392_S	1.987	1.00
124_L	150_Q	1.970	1.00
337_G	360_Q	1.965	1.00
376_M	380_M	1.959	1.00
26_A	29_D	1.957	1.00
57_I	75_C	1.954	1.00
288_S	299_V	1.939	1.00
265_K	306_D	1.916	1.00
146_R	150_Q	1.916	1.00
264_L	339_F	1.899	1.00
261_A	285_I	1.889	1.00
193_G	283_K	1.878	1.00
199_V	274_W	1.855	1.00
22_K	39_E	1.839	1.00
260_V	410_V	1.834	1.00
134_Q	152_L	1.832	1.00
17_E	67_T	1.831	1.00
123_R	127_E	1.828	1.00
32_N	35_D	1.819	1.00
61_V	73_M	1.812	1.00
196_E	280_I	1.805	1.00
295_D	327_G	1.783	1.00
33_K	54_T	1.774	1.00
261_A	305_A	1.756	1.00
257_V	289_I	1.751	1.00
57_I	60_L	1.747	1.00
20_I	38_A	1.744	1.00
286_N	303_K	1.732	1.00
240_D	244_K	1.724	1.00
269_Q	281_Q	1.718	1.00
243_K	249_N	1.702	1.00
69_Q	72_E	1.700	1.00
257_V	305_A	1.695	1.00
230_N	233_A	1.679	1.00
212_R	216_E	1.671	1.00
205_A	209_N	1.650	1.00
256_F	366_V	1.642	1.00
202_V	206_I	1.634	1.00
409_R	412_Q	1.620	1.00
289_I	317_I	1.610	1.00
324_V	329_L	1.599	1.00
272_S	281_Q	1.593	1.00
38_A	74_I	1.593	1.00
4_E	53_F	1.581	1.00
209_N	212_R	1.580	1.00
214_K	219_H	1.572	1.00
125_A	132_L	1.568	1.00
232_V	252_F	1.565	1.00
257_V	317_I	1.561	1.00
302_I	316_D	1.550	1.00
24_L	39_E	1.549	1.00
262_Q	413_I	1.544	1.00
195_K	281_Q	1.531	1.00
272_S	397_V	1.502	1.00
124_L	149_I	1.501	1.00
150_Q	154_E	1.483	1.00
62_G	68_L	1.473	1.00
309_T	312_G	1.467	1.00
117_Y	132_L	1.464	1.00
237_S	418_D	1.461	1.00
217_I	356_I	1.451	1.00
304_N	307_E	1.449	1.00
373_P	381_I	1.439	1.00
269_Q	402_V	1.416	1.00
257_V	341_V	1.411	1.00
203_R	206_I	1.409	1.00
137_G	144_I	1.407	1.00
263_A	410_V	1.405	1.00
130_I	135_V	1.384	1.00
267_F	405_R	1.383	1.00
229_T	384_R	1.379	1.00
223_M	351_Q	1.376	1.00
194_D	280_I	1.373	1.00
361_A	397_V	1.373	1.00
408_G	412_Q	1.339	1.00
211_K	215_T	1.331	1.00
147_K	151_R	1.330	1.00
354_G	365_Q	1.316	1.00
317_I	321_A	1.290	1.00
39_E	48_E	1.289	1.00
339_F	362_A	1.287	1.00
372_R	386_M	1.286	1.00
208_S	212_R	1.284	1.00
371_K	383_V	1.283	1.00
6_M	75_C	1.278	1.00
27_P	63_E	1.278	1.00
275_A	278_K	1.278	1.00
56_T	78_E	1.273	1.00
389_L	410_V	1.271	1.00
236_N	240_D	1.251	1.00
194_D	283_K	1.240	1.00
198_P	278_K	1.227	1.00
7_T	73_M	1.223	1.00
260_V	406_F	1.223	1.00
222_T	403_C	1.220	1.00
21_S	46_N	1.217	1.00
26_A	60_L	1.208	1.00
239_K	249_N	1.203	1.00
364_L	410_V	1.201	1.00
286_N	304_N	1.200	1.00
284_D	306_D	1.198	1.00
124_L	128_H	1.198	1.00
137_G	143_R	1.193	1.00
231_M	255_F	1.193	1.00
227_D	376_M	1.186	1.00
203_R	399_D	1.184	1.00
373_P	383_V	1.183	1.00
357_N	360_Q	1.180	1.00
196_E	275_A	1.169	1.00
288_S	360_Q	1.166	1.00
217_I	358_Y	1.164	1.00
279_I	397_V	1.163	1.00
222_T	393_L	1.160	1.00
233_A	237_S	1.153	1.00
128_H	150_Q	1.151	1.00
222_T	349_S	1.146	1.00
225_E	350_V	1.143	1.00
258_K	262_Q	1.142	1.00
147_K	150_Q	1.135	1.00
275_A	280_I	1.133	1.00
260_V	362_A	1.127	1.00
274_W	397_V	1.126	1.00
233_A	236_N	1.125	1.00
221_W	392_S	1.114	1.00
132_L	144_I	1.111	1.00
228_V	231_M	1.110	1.00
409_R	413_I	1.101	1.00
229_T	233_A	1.095	1.00
321_A	325_R	1.091	1.00
241_S	419_E	1.088	1.00
56_T	81_G	1.086	1.00
350_V	370_V	1.077	1.00
221_W	353_M	1.072	1.00
411_K	415_E	1.067	1.00
292_A	405_R	1.064	1.00
36_P	48_E	1.059	1.00
257_V	302_I	1.051	1.00
369_I	385_D	1.051	1.00
204_K	277_D	1.050	1.00
224_M	411_K	1.048	1.00
115_K	144_I	1.046	1.00
374_V	386_M	1.043	1.00
366_V	387_V	1.039	1.00
236_N	239_K	1.038	1.00
151_R	155_T	1.038	1.00
292_A	347_F	1.033	1.00
228_V	387_V	1.033	1.00
130_I	153_I	1.027	1.00
270_M	398_L	1.026	1.00
6_M	77_I	1.023	1.00
136_T	152_L	1.020	1.00
90_E	93_A	1.017	1.00
194_D	284_D	1.011	1.00
285_I	306_D	1.010	1.00
211_K	217_I	1.009	1.00
31_V	51_S	1.006	1.00
238_I	250_L	1.003	1.00
330_T	333_D	0.996	1.00
401_L	405_R	0.995	1.00
27_P	58_T	0.993	1.00
374_V	384_R	0.989	1.00
298_F	334_M	0.985	1.00
6_M	37_I	0.982	1.00
232_V	385_D	0.982	1.00
214_K	218_P	0.981	1.00
228_V	369_I	0.980	1.00
376_M	384_R	0.975	1.00
20_I	74_I	0.968	1.00
270_M	362_A	0.965	1.00
223_M	353_M	0.964	1.00
229_T	385_D	0.964	1.00
125_A	144_I	0.963	1.00
257_V	313_I	0.960	1.00
339_F	406_F	0.958	1.00
23_W	60_L	0.957	1.00
220_A	393_L	0.955	1.00
319_G	322_K	0.954	1.00
262_Q	265_K	0.954	1.00
391_L	407_L	0.953	1.00
311_K	315_K	0.952	1.00
62_G	66_Q	0.951	1.00
151_R	154_E	0.950	1.00
286_N	301_V	0.949	1.00
364_L	391_L	0.949	1.00
26_A	64_E	0.948	1.00
8_M	18_G	0.948	1.00
15_V	18_G	0.947	1.00
125_A	130_I	0.946	1.00
27_P	60_L	0.945	1.00
262_Q	420_K	0.944	1.00
53_F	77_I	0.943	1.00
246_E	315_K	0.937	1.00
226_V	411_K	0.936	1.00
20_I	62_G	0.933	1.00
153_I	156_G	0.930	1.00
120_A	146_R	0.925	1.00
130_I	149_I	0.923	1.00
17_E	69_Q	0.922	1.00
266_E	413_I	0.922	1.00
304_N	308_K	0.917	1.00
292_A	401_L	0.911	1.00
125_A	135_V	0.907	1.00
194_D	282_K	0.906	1.00
68_L	72_E	0.905	1.00
323_K	330_T	0.904	1.00
298_F	329_L	0.901	1.00
121_V	146_R	0.897	1.00
139_G	148_D	0.896	1.00
222_T	407_L	0.894	1.00
219_H	356_I	0.894	1.00
339_F	364_L	0.891	0.99
395_H	400_G	0.887	0.99
265_K	285_I	0.883	0.99
132_L	135_V	0.882	0.99
260_V	364_L	0.876	0.99
98_A	102_V	0.876	0.99
31_V	57_I	0.875	0.99
201_G	204_K	0.873	0.99
138_T	148_D	0.873	0.99
254_A	310_I	0.872	0.99
379_G	383_V	0.871	0.99
117_Y	125_A	0.867	0.99
139_G	142_G	0.862	0.99
204_K	208_S	0.860	0.99
86_E	89_Q	0.859	0.99
11_L	18_G	0.857	0.99
302_I	317_I	0.856	0.99
344_T	352_S	0.855	0.99
302_I	308_K	0.855	0.99
37_I	51_S	0.855	0.99
40_V	49_V	0.854	0.99
138_T	142_G	0.852	0.99
24_L	48_E	0.851	0.99
221_W	390_C	0.844	0.99
138_T	145_T	0.843	0.99
206_I	210_M	0.842	0.99
376_M	379_G	0.841	0.99
60_L	63_E	0.839	0.99
312_G	315_K	0.836	0.99
329_L	334_M	0.835	0.99
214_K	217_I	0.833	0.99
339_F	391_L	0.831	0.99
214_K	355_I	0.830	0.99
137_G	142_G	0.829	0.99
121_V	149_I	0.828	0.99
350_V	388_N	0.815	0.99
8_M	40_V	0.814	0.99
60_L	66_Q	0.811	0.99
135_V	152_L	0.808	0.99
393_L	403_C	0.803	0.99
19_T	67_T	0.800	0.99
58_T	76_K	0.799	0.99
256_F	387_V	0.796	0.99
25_V	29_D	0.794	0.99
34_Y	50_P	0.791	0.99
87_Q	91_Q	0.791	0.99
199_V	279_I	0.791	0.99
243_K	246_E	0.788	0.99
371_K	378_N	0.779	0.99
228_V	414_L	0.779	0.99
222_T	367_E	0.777	0.99
149_I	152_L	0.774	0.99
234_Y	255_F	0.771	0.99
241_S	245_T	0.769	0.98
366_V	389_L	0.768	0.98
362_A	391_L	0.768	0.98
19_T	65_G	0.764	0.98
157_G	160_E	0.764	0.98
90_E	94_A	0.762	0.98
30_K	54_T	0.755	0.98
199_V	276_G	0.753	0.98
248_F	315_K	0.751	0.98
202_V	295_D	0.750	0.98
115_K	133_D	0.748	0.98
11_L	40_V	0.748	0.98
193_G	284_D	0.745	0.98
303_K	332_D	0.744	0.98
33_K	51_S	0.743	0.98
225_E	386_M	0.741	0.98
117_Y	121_V	0.739	0.98
51_S	54_T	0.736	0.98
254_A	313_I	0.734	0.98
99_E	102_V	0.733	0.98
121_V	125_A	0.732	0.98
225_E	370_V	0.731	0.98
288_S	337_G	0.731	0.98
240_D	243_K	0.729	0.98
4_E	79_T	0.728	0.98
270_M	402_V	0.726	0.98
271_N	338_T	0.725	0.98
262_Q	266_E	0.723	0.98
202_V	293_T	0.723	0.98
160_E	163_P	0.722	0.98
241_S	244_K	0.722	0.98
323_K	328_K	0.721	0.98
319_G	333_D	0.720	0.98
223_M	390_C	0.716	0.98
154_E	157_G	0.715	0.98
270_M	361_A	0.715	0.98
350_V	368_S	0.715	0.98
286_N	333_D	0.713	0.98
286_N	360_Q	0.712	0.98
124_L	146_R	0.710	0.97
58_T	80_E	0.709	0.97
152_L	156_G	0.709	0.97
293_T	298_F	0.708	0.97
291_V	325_R	0.707	0.97
362_A	398_L	0.706	0.97
308_K	319_G	0.705	0.97
125_A	131_D	0.705	0.97
332_D	335_Q	0.704	0.97
351_Q	388_N	0.704	0.97
239_K	243_K	0.702	0.97
256_F	414_L	0.701	0.97
331_A	335_Q	0.700	0.97
213_S	219_H	0.700	0.97
156_G	159_Q	0.700	0.97
237_S	416_S	0.699	0.97
260_V	263_A	0.699	0.97
16_T	69_Q	0.699	0.97
250_L	254_A	0.698	0.97
209_N	357_N	0.698	0.97
31_V	77_I	0.696	0.97
344_T	365_Q	0.696	0.97
226_V	414_L	0.694	0.97
389_L	407_L	0.694	0.97
214_K	392_S	0.691	0.97
224_M	349_S	0.689	0.97
228_V	385_D	0.689	0.97
10_Q	13_E	0.686	0.97
264_L	406_F	0.685	0.97
286_N	337_G	0.684	0.97
312_G	316_D	0.683	0.97
252_F	369_I	0.683	0.97
210_M	299_V	0.683	0.97
125_A	149_I	0.682	0.97
267_F	402_V	0.681	0.97
263_A	409_R	0.681	0.97
318_T	322_K	0.680	0.97
238_I	241_S	0.678	0.97
305_A	313_I	0.674	0.97
250_L	255_F	0.673	0.97
36_P	39_E	0.669	0.96
416_S	419_E	0.669	0.96
222_T	344_T	0.668	0.96
337_G	357_N	0.668	0.96
37_I	75_C	0.667	0.96
214_K	221_W	0.666	0.96
137_G	148_D	0.665	0.96
197_I	269_Q	0.663	0.96
391_L	403_C	0.659	0.96
30_K	80_E	0.659	0.96
406_F	410_V	0.658	0.96
270_M	406_F	0.658	0.96
213_S	358_Y	0.657	0.96
230_N	384_R	0.657	0.96
20_I	60_L	0.657	0.96
371_K	375_V	0.657	0.96
301_V	336_G	0.657	0.96
51_S	77_I	0.654	0.96
56_T	80_E	0.652	0.96
124_L	130_I	0.652	0.96
356_I	362_A	0.651	0.96
410_V	414_L	0.649	0.96
230_N	418_D	0.649	0.96
323_K	329_L	0.648	0.96
24_L	27_P	0.646	0.96
211_K	214_K	0.645	0.96
183_E	186_S	0.645	0.96
192_A	284_D	0.644	0.96
269_Q	272_S	0.644	0.96
375_V	378_N	0.644	0.96
115_K	132_L	0.639	0.95
5_Q	61_V	0.639	0.95
344_T	349_S	0.636	0.95
253_F	256_F	0.635	0.95
225_E	388_N	0.635	0.95
117_Y	144_I	0.634	0.95
121_V	144_I	0.634	0.95
256_F	341_V	0.634	0.95
199_V	278_K	0.634	0.95
80_E	83_N	0.633	0.95
8_M	68_L	0.633	0.95
216_E	358_Y	0.632	0.95
376_M	383_V	0.632	0.95
11_L	14_S	0.631	0.95
301_V	360_Q	0.630	0.95
244_K	247_G	0.628	0.95
91_Q	94_A	0.628	0.95
303_K	316_D	0.625	0.95
287_I	339_F	0.624	0.95
264_L	285_I	0.623	0.95
376_M	381_I	0.623	0.95
188_P	191_A	0.622	0.95
92_P	95_S	0.622	0.95
107_G	110_D	0.622	0.95
292_A	402_V	0.616	0.94
10_Q	14_S	0.616	0.94
190_S	193_G	0.615	0.94
11_L	49_V	0.615	0.94
337_G	358_Y	0.615	0.94
300_P	337_G	0.614	0.94
199_V	275_A	0.613	0.94
18_G	40_V	0.612	0.94
38_A	49_V	0.612	0.94
4_E	7_T	0.610	0.94
253_F	341_V	0.609	0.94
100_N	103_A	0.609	0.94
340_T	360_Q	0.608	0.94
34_Y	54_T	0.607	0.94
86_E	90_E	0.604	0.94
21_S	65_G	0.604	0.94
379_G	385_D	0.602	0.94
27_P	76_K	0.602	0.94
139_G	145_T	0.600	0.94
412_Q	419_E	0.600	0.94
253_F	289_I	0.599	0.93
301_V	337_G	0.599	0.93
253_F	346_S	0.599	0.93
36_P	50_P	0.598	0.93
224_M	407_L	0.597	0.93
97_A	101_P	0.596	0.93
264_L	270_M	0.596	0.93
231_M	414_L	0.595	0.93
261_A	265_K	0.595	0.93
79_T	82_A	0.595	0.93
259_A	414_L	0.594	0.93
351_Q	354_G	0.594	0.93
207_A	274_W	0.590	0.93
192_A	283_K	0.590	0.93
263_A	413_I	0.589	0.93
180_E	183_E	0.588	0.93
89_Q	93_A	0.586	0.93
232_V	369_I	0.585	0.93
235_R	239_K	0.585	0.93
15_V	70_V	0.584	0.93
289_I	341_V	0.583	0.93
21_S	24_L	0.581	0.92
89_Q	92_P	0.581	0.92
351_Q	390_C	0.581	0.92
97_A	100_N	0.578	0.92
6_M	52_S	0.578	0.92
150_Q	153_I	0.577	0.92
354_G	390_C	0.577	0.92
153_I	157_G	0.577	0.92
371_K	376_M	0.577	0.92
372_R	388_N	0.576	0.92
18_G	42_T	0.575	0.92
124_L	153_I	0.573	0.92
109_A	112_P	0.572	0.92
88_K	91_Q	0.572	0.92
262_Q	409_R	0.571	0.92
18_G	45_V	0.571	0.92
330_T	335_Q	0.570	0.92
39_E	46_N	0.569	0.92
142_G	148_D	0.568	0.92
93_A	96_E	0.567	0.91
4_E	77_I	0.565	0.91
8_M	74_I	0.564	0.91
7_T	71_G	0.561	0.91
371_K	381_I	0.560	0.91
303_K	333_D	0.560	0.91
316_D	323_K	0.559	0.91
93_A	97_A	0.559	0.91
98_A	104_K	0.558	0.91
134_Q	156_G	0.557	0.91
87_Q	90_E	0.555	0.91
88_K	93_A	0.555	0.91
120_A	124_L	0.555	0.91
20_I	52_S	0.553	0.90
130_I	134_Q	0.552	0.90
211_K	218_P	0.551	0.90
88_K	92_P	0.549	0.90
352_S	367_E	0.547	0.90
221_W	365_Q	0.547	0.90
58_T	79_T	0.546	0.90
417_I	420_K	0.546	0.90
203_R	207_A	0.546	0.90
128_H	154_E	0.545	0.90
135_V	144_I	0.544	0.90
227_D	230_N	0.543	0.90
88_K	94_A	0.542	0.90
192_A	286_N	0.542	0.90
273_M	280_I	0.541	0.89
144_I	149_I	0.541	0.89
269_Q	279_I	0.540	0.89
367_E	404_G	0.539	0.89
8_M	75_C	0.539	0.89
30_K	57_I	0.539	0.89
92_P	96_E	0.539	0.89
365_Q	392_S	0.539	0.89
402_V	405_R	0.538	0.89
285_I	338_T	0.537	0.89
96_E	107_G	0.537	0.89
253_F	343_N	0.536	0.89
290_A	297_L	0.536	0.89
347_F	404_G	0.536	0.89
89_Q	95_S	0.536	0.89
20_I	68_L	0.535	0.89
264_L	362_A	0.535	0.89
86_E	92_P	0.535	0.89
218_P	396_R	0.534	0.89
61_V	72_E	0.532	0.89
135_V	149_I	0.531	0.89
198_P	201_G	0.530	0.89
356_I	392_S	0.530	0.89
96_E	99_E	0.530	0.89
313_I	320_L	0.530	0.89
316_D	320_L	0.530	0.89
23_W	62_G	0.529	0.88
149_I	153_I	0.528	0.88
405_R	408_G	0.528	0.88
370_V	374_V	0.527	0.88
202_V	205_A	0.527	0.88
373_P	384_R	0.527	0.88
291_V	320_L	0.526	0.88
209_N	359_P	0.525	0.88
251_T	314_A	0.525	0.88
90_E	95_S	0.525	0.88
282_K	338_T	0.524	0.88
91_Q	95_S	0.524	0.88
78_E	81_G	0.523	0.88
193_G	304_N	0.523	0.88
315_K	319_G	0.522	0.88
156_G	161_Q	0.522	0.88
331_A	334_M	0.521	0.88
99_E	103_A	0.521	0.88
227_D	374_V	0.520	0.88
23_W	38_A	0.518	0.87
25_V	75_C	0.517	0.87
289_I	342_N	0.517	0.87
187_Y	190_S	0.516	0.87
234_Y	418_D	0.515	0.87
118_S	124_L	0.515	0.87
185_T	188_P	0.514	0.87
96_E	102_V	0.514	0.87
105_S	111_Q	0.514	0.87
27_P	57_I	0.513	0.87
353_M	393_L	0.513	0.87
344_T	367_E	0.511	0.87
209_N	358_Y	0.511	0.87
96_E	100_N	0.511	0.87
192_A	304_N	0.510	0.87
34_Y	121_V	0.509	0.86
223_M	388_N	0.508	0.86
197_I	279_I	0.507	0.86
344_T	366_V	0.507	0.86
413_I	419_E	0.506	0.86
84_P	92_P	0.506	0.86
95_S	103_A	0.505	0.86
61_V	74_I	0.505	0.86
287_I	313_I	0.505	0.86
380_M	383_V	0.504	0.86
368_S	408_G	0.503	0.86
99_E	107_G	0.502	0.86
8_M	47_A	0.501	0.86
294_E	326_D	0.500	0.86

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3dvaI	1	0.0991	100	0.172	Contact Map
2ii3A	4	0.5448	100	0.462	Contact Map
3maeA	3	0.5637	100	0.468	Contact Map
1sczA	4	0.5495	100	0.469	Contact Map
4n72A	3	0.5755	100	0.47	Contact Map
1dpbA	4	0.5684	100	0.471	Contact Map
3b8kA	1	0.5613	100	0.476	Contact Map
3l60A	3	0.5307	100	0.485	Contact Map
3rqcA	4	0.5142	100	0.501	Contact Map
2xt6A	2	0.4505	100	0.516	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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