ATPB - BACSU - GREMLIN Contacts

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ATPB - ATP synthase subunit beta

UniProt:	P37809	Sequences: MKKGRVSQVLGPVVDVRFEDGHLPEIYNAIKISQPAASENEVGIDLTLEVALHLGDDTVRTIAMASTDGVQRGMEAVDTGAPISVPVGDVTLGRVFNVLGENIDLNEPVPADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVINKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDVQGQDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAILGMDELGEEDKLVVHRARRIQFFLSQNFHVAEQFTGQKGSYVPVKETVQGFKEILAGKYDHLPEDAFRLVGRIEEVVEKAKEMGVEV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	473 (409)
Sequences:	7672 (2697)
Seq/√Len:	133.3

ECOLI - ATPB ATPA FLII RHO
BACSU - ATPB ATPA FLII RHO
HALSA - VATB VATA
SULSO - VATB VATA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
97_N	101_E	8.239	1.00
150_K	246_D	4.900	1.00
186_A	232_G	4.629	1.00
332_E	345_D	4.553	1.00
141_V	344_V	3.473	1.00
370_V	406_I	3.386	1.00
28_N	78_D	3.196	1.00
89_D	243_Q	3.150	1.00
81_A	84_S	2.861	1.00
94_R	104_D	2.822	1.00
49_E	61_T	2.802	1.00
419_Q	422_G	2.793	1.00
89_D	245_Q	2.739	1.00
184_V	236_A	2.659	1.00
133_E	150_K	2.577	1.00
84_S	115_K	2.545	1.00
148_Y	303_I	2.539	1.00
233_L	304_Q	2.532	1.00
178_E	181_G	2.484	1.00
236_A	300_V	2.453	1.00
359_V	364_Y	2.436	1.00
166_V	414_F	2.423	1.00
140_K	418_E	2.350	1.00
369_E	372_S	2.335	1.00
90_V	112_D	2.293	1.00
205_S	209_N	2.253	1.00
96_F	235_M	2.239	1.00
214_V	235_M	2.221	1.00
26_I	61_T	2.164	1.00
116_D	120_R	2.155	1.00
313_Y	330_N	2.140	1.00
196_N	200_Y	2.122	1.00
378_K	381_Q	2.115	1.00
335_L	340_I	2.093	1.00
16_V	76_A	2.084	1.00
403_A	407_Q	2.082	1.00
206_G	209_N	2.012	1.00
145_L	370_V	2.009	1.00
200_Y	203_S	2.008	1.00
361_E	365_A	1.974	1.00
199_F	213_M	1.960	1.00
113_A	116_D	1.957	1.00
238_H	243_Q	1.932	1.00
106_N	203_S	1.917	1.00
200_Y	204_D	1.915	1.00
25_E	28_N	1.906	1.00
116_D	234_T	1.893	1.00
148_Y	329_T	1.885	1.00
381_Q	385_A	1.875	1.00
237_E	291_R	1.874	1.00
31_K	77_V	1.868	1.00
136_E	143_D	1.864	1.00
429_P	432_E	1.851	1.00
144_L	409_F	1.848	1.00
182_I	245_Q	1.825	1.00
212_A	235_M	1.796	1.00
116_D	238_H	1.791	1.00
340_I	411_S	1.783	1.00
16_V	19_E	1.747	1.00
340_I	407_Q	1.746	1.00
31_K	46_L	1.745	1.00
30_I	76_A	1.732	1.00
384_I	400_V	1.729	1.00
338_M	407_Q	1.722	1.00
392_L	401_H	1.703	1.00
32_I	51_A	1.676	1.00
339_G	368_R	1.668	1.00
159_G	162_V	1.657	1.00
94_R	107_E	1.643	1.00
240_R	295_T	1.634	1.00
94_R	106_N	1.627	1.00
16_V	61_T	1.621	1.00
306_I	321_T	1.619	1.00
144_L	423_Q	1.618	1.00
96_F	214_V	1.604	1.00
133_E	294_S	1.597	1.00
30_I	61_T	1.597	1.00
147_P	354_L	1.579	1.00
184_V	235_M	1.574	1.00
89_D	238_H	1.568	1.00
86_P	115_K	1.568	1.00
85_V	235_M	1.547	1.00
406_I	430_V	1.538	1.00
90_V	110_P	1.520	1.00
401_H	404_R	1.513	1.00
91_T	235_M	1.513	1.00
17_R	58_T	1.507	1.00
246_D	299_S	1.505	1.00
354_L	367_A	1.481	1.00
90_V	111_A	1.480	1.00
182_I	239_F	1.478	1.00
186_A	251_I	1.472	1.00
155_G	325_L	1.451	1.00
142_V	171_L	1.440	1.00
15_D	58_T	1.439	1.00
116_D	241_D	1.435	1.00
33_S	77_V	1.433	1.00
188_V	228_V	1.427	1.00
366_V	428_V	1.421	1.00
97_N	220_E	1.411	1.00
28_N	80_G	1.405	1.00
102_N	107_E	1.404	1.00
408_F	411_S	1.394	1.00
255_F	259_Q	1.393	1.00
94_R	102_N	1.393	1.00
83_I	118_I	1.385	1.00
142_V	329_T	1.381	1.00
137_T	148_Y	1.380	1.00
81_A	115_K	1.377	1.00
67_T	70_V	1.368	1.00
95_V	199_F	1.362	1.00
85_V	231_T	1.356	1.00
413_N	416_V	1.349	1.00
229_A	288_L	1.346	1.00
233_L	292_I	1.341	1.00
127_Q	296_N	1.340	1.00
247_V	300_V	1.314	1.00
338_M	381_Q	1.313	1.00
104_D	107_E	1.313	1.00
376_R	379_E	1.309	1.00
182_I	212_A	1.307	1.00
289_Q	324_H	1.299	1.00
355_A	364_Y	1.298	1.00
187_G	195_G	1.298	1.00
261_G	284_E	1.289	1.00
124_S	127_Q	1.278	1.00
388_G	391_E	1.277	1.00
204_D	207_V	1.274	1.00
372_S	397_K	1.274	1.00
172_I	211_T	1.273	1.00
315_D	318_P	1.271	1.00
220_E	224_A	1.267	1.00
368_R	371_Q	1.258	1.00
120_R	241_D	1.257	1.00
369_E	373_T	1.256	1.00
203_S	208_I	1.251	1.00
201_E	357_E	1.249	1.00
166_V	415_H	1.240	1.00
376_R	398_L	1.235	1.00
146_A	329_T	1.233	1.00
48_L	101_E	1.232	1.00
233_L	300_V	1.226	1.00
285_M	321_T	1.224	1.00
360_G	420_F	1.224	1.00
244_G	297_V	1.210	1.00
111_A	115_K	1.203	1.00
31_K	79_T	1.203	1.00
86_P	111_A	1.195	0.99
92_L	212_A	1.193	0.99
422_G	426_S	1.186	0.99
340_I	410_L	1.181	0.99
334_K	337_E	1.173	0.99
405_R	408_F	1.166	0.99
14_V	32_I	1.163	0.99
17_R	57_D	1.162	0.99
154_I	303_I	1.154	0.99
134_I	358_I	1.151	0.99
98_V	231_T	1.150	0.99
129_S	132_V	1.146	0.99
33_S	75_E	1.130	0.99
348_A	378_K	1.129	0.99
186_A	249_F	1.119	0.99
192_T	217_Q	1.119	0.99
265_S	273_S	1.118	0.99
254_I	321_T	1.112	0.99
353_A	358_I	1.111	0.99
63_A	67_T	1.089	0.99
139_I	167_L	1.089	0.99
243_Q	247_V	1.079	0.99
380_L	384_I	1.075	0.99
364_Y	368_R	1.071	0.99
345_D	348_A	1.066	0.99
289_Q	321_T	1.059	0.99
173_N	178_E	1.054	0.99
131_E	149_I	1.051	0.99
148_Y	301_T	1.048	0.99
230_L	284_E	1.047	0.99
137_T	303_I	1.044	0.99
311_D	314_T	1.039	0.99
65_A	224_A	1.039	0.99
181_G	246_D	1.038	0.99
139_I	142_V	1.038	0.99
44_I	74_M	1.029	0.98
212_A	239_F	1.024	0.98
23_L	28_N	1.022	0.98
159_G	333_R	1.022	0.98
91_T	96_F	1.014	0.98
241_D	295_T	1.013	0.98
179_H	246_D	1.013	0.98
136_E	420_F	1.010	0.98
308_V	318_P	1.001	0.98
91_T	212_A	1.001	0.98
98_V	103_I	0.999	0.98
29_A	79_T	0.998	0.98
285_M	324_H	0.996	0.98
254_I	289_Q	0.983	0.98
308_V	315_D	0.981	0.98
113_A	238_H	0.977	0.98
98_V	224_A	0.977	0.98
233_L	249_F	0.976	0.98
92_L	182_I	0.975	0.98
394_E	398_L	0.970	0.98
199_F	203_S	0.969	0.98
159_G	311_D	0.969	0.98
88_G	91_T	0.965	0.98
109_V	112_D	0.963	0.98
335_L	411_S	0.963	0.98
172_I	183_S	0.960	0.98
34_Q	45_D	0.959	0.98
240_R	247_V	0.949	0.97
137_T	143_D	0.938	0.97
363_H	420_F	0.934	0.97
354_L	359_V	0.932	0.97
330_N	333_R	0.932	0.97
311_D	333_R	0.930	0.97
225_R	263_E	0.930	0.97
334_K	378_K	0.928	0.97
232_G	249_F	0.928	0.97
188_V	251_I	0.925	0.97
14_V	19_E	0.925	0.97
94_R	109_V	0.924	0.97
24_P	59_V	0.922	0.97
401_H	405_R	0.918	0.97
172_I	250_F	0.917	0.97
24_P	51_A	0.916	0.97
168_I	250_F	0.915	0.97
363_H	424_K	0.915	0.97
159_G	319_A	0.915	0.97
156_L	168_I	0.911	0.97
327_A	352_R	0.908	0.97
135_L	181_G	0.907	0.97
376_R	380_L	0.907	0.97
190_E	194_E	0.905	0.97
354_L	363_H	0.905	0.97
172_I	185_F	0.904	0.97
118_I	231_T	0.904	0.97
362_E	431_K	0.903	0.96
418_E	426_S	0.903	0.96
283_T	286_G	0.902	0.96
313_Y	318_P	0.901	0.96
89_D	239_F	0.900	0.96
285_M	320_T	0.895	0.96
207_V	211_T	0.895	0.96
294_S	299_S	0.894	0.96
14_V	28_N	0.891	0.96
355_A	371_Q	0.890	0.96
94_R	103_I	0.887	0.96
101_E	108_P	0.885	0.96
171_L	248_L	0.885	0.96
183_S	186_A	0.883	0.96
337_E	348_A	0.882	0.96
318_P	330_N	0.878	0.96
148_Y	154_I	0.878	0.96
253_N	305_A	0.877	0.96
94_R	108_P	0.875	0.96
30_I	49_E	0.874	0.96
50_V	64_M	0.873	0.96
184_V	212_A	0.872	0.96
136_E	179_H	0.872	0.96
13_V	268_L	0.871	0.96
259_Q	309_P	0.869	0.96
393_G	396_D	0.869	0.96
106_N	109_V	0.865	0.96
71_Q	74_M	0.864	0.95
246_D	294_S	0.864	0.95
257_F	288_L	0.863	0.95
32_I	74_M	0.861	0.95
374_L	406_I	0.860	0.95
34_Q	43_G	0.858	0.95
33_S	46_L	0.857	0.95
207_V	210_K	0.855	0.95
134_I	147_P	0.853	0.95
330_N	348_A	0.852	0.95
98_V	220_E	0.850	0.95
149_I	358_I	0.848	0.95
65_A	101_E	0.847	0.95
34_Q	46_L	0.846	0.95
129_S	294_S	0.845	0.95
372_S	411_S	0.844	0.95
313_Y	348_A	0.843	0.95
292_I	302_S	0.842	0.95
418_E	423_Q	0.841	0.95
96_F	109_V	0.839	0.95
372_S	376_R	0.837	0.95
277_Y	312_D	0.836	0.95
259_Q	277_Y	0.836	0.95
420_F	424_K	0.833	0.95
366_V	427_Y	0.833	0.95
83_I	227_R	0.832	0.94
178_E	182_I	0.829	0.94
112_D	115_K	0.829	0.94
113_A	243_Q	0.826	0.94
147_P	420_F	0.825	0.94
359_V	424_K	0.821	0.94
32_I	49_E	0.820	0.94
418_E	424_K	0.820	0.94
377_Y	403_A	0.819	0.94
142_V	146_A	0.818	0.94
197_D	357_E	0.816	0.94
312_D	319_A	0.811	0.94
149_I	353_A	0.804	0.93
28_N	143_D	0.802	0.93
18_F	23_L	0.801	0.93
191_R	194_E	0.801	0.93
250_F	305_A	0.797	0.93
133_E	246_D	0.796	0.93
104_D	109_V	0.794	0.93
124_S	128_L	0.794	0.93
157_F	318_P	0.793	0.93
362_E	435_Q	0.791	0.93
281_L	284_E	0.790	0.93
182_I	210_K	0.789	0.93
366_V	424_K	0.787	0.93
13_V	60_R	0.786	0.93
150_K	299_S	0.785	0.93
248_L	303_I	0.784	0.93
360_G	363_H	0.781	0.92
154_I	327_A	0.778	0.92
258_T	285_M	0.777	0.92
145_L	367_A	0.777	0.92
209_N	212_A	0.775	0.92
377_Y	381_Q	0.771	0.92
188_V	229_A	0.770	0.92
216_G	220_E	0.764	0.92
94_R	105_L	0.763	0.91
385_A	395_E	0.763	0.91
108_P	111_A	0.760	0.91
43_G	49_E	0.760	0.91
90_V	113_A	0.760	0.91
190_E	256_R	0.759	0.91
173_N	415_H	0.758	0.91
137_T	142_V	0.757	0.91
147_P	363_H	0.756	0.91
173_N	210_K	0.754	0.91
141_V	410_L	0.753	0.91
179_H	182_I	0.753	0.91
104_D	108_P	0.753	0.91
65_A	221_P	0.751	0.91
64_M	224_A	0.750	0.91
159_G	312_D	0.750	0.91
247_V	263_E	0.747	0.91
31_K	48_L	0.746	0.91
230_L	257_F	0.746	0.91
147_P	359_V	0.745	0.91
373_T	406_I	0.741	0.90
365_A	368_R	0.738	0.90
238_H	241_D	0.737	0.90
84_S	117_P	0.736	0.90
87_V	234_T	0.736	0.90
310_A	315_D	0.734	0.90
125_F	128_L	0.732	0.90
361_E	413_N	0.729	0.90
221_P	224_A	0.725	0.89
168_I	305_A	0.724	0.89
251_I	288_L	0.724	0.89
382_D	385_A	0.723	0.89
103_I	108_P	0.723	0.89
16_V	30_I	0.722	0.89
101_E	115_K	0.721	0.89
380_L	398_L	0.721	0.89
80_G	83_I	0.719	0.89
415_H	426_S	0.718	0.89
108_P	112_D	0.717	0.89
191_R	256_R	0.716	0.89
402_R	405_R	0.716	0.89
365_A	369_E	0.716	0.89
181_G	245_Q	0.713	0.89
99_L	102_N	0.710	0.88
54_L	60_R	0.709	0.88
47_T	65_A	0.707	0.88
82_P	117_P	0.707	0.88
257_F	284_E	0.704	0.88
143_D	423_Q	0.702	0.88
83_I	143_D	0.702	0.88
12_P	78_D	0.702	0.88
11_G	14_V	0.692	0.87
183_S	250_F	0.692	0.87
332_E	348_A	0.692	0.87
395_E	398_L	0.690	0.87
12_P	31_K	0.689	0.87
423_Q	426_S	0.688	0.87
422_G	425_G	0.685	0.86
53_H	60_R	0.685	0.86
249_F	292_I	0.684	0.86
374_L	378_K	0.684	0.86
149_I	352_R	0.684	0.86
359_V	367_A	0.683	0.86
146_A	350_T	0.683	0.86
346_P	374_L	0.682	0.86
397_K	404_R	0.680	0.86
92_L	208_I	0.679	0.86
48_L	51_A	0.679	0.86
66_S	69_G	0.679	0.86
226_M	261_G	0.678	0.86
231_T	234_T	0.677	0.86
233_L	251_I	0.677	0.86
83_I	231_T	0.675	0.86
131_E	353_A	0.675	0.86
394_E	397_K	0.674	0.86
14_V	30_I	0.674	0.86
228_V	232_G	0.672	0.85
204_D	208_I	0.671	0.85
95_V	103_I	0.671	0.85
160_A	324_H	0.670	0.85
159_G	276_G	0.669	0.85
418_E	422_G	0.669	0.85
258_T	317_A	0.669	0.85
92_L	245_Q	0.669	0.85
319_A	322_F	0.667	0.85
195_G	215_F	0.666	0.85
129_S	297_V	0.666	0.85
183_S	211_T	0.665	0.85
96_F	99_L	0.665	0.85
62_I	264_V	0.664	0.85
360_G	424_K	0.663	0.85
136_E	427_Y	0.662	0.85
182_I	247_V	0.662	0.85
128_L	131_E	0.661	0.84
135_L	148_Y	0.659	0.84
92_L	95_V	0.657	0.84
15_D	60_R	0.657	0.84
142_V	167_L	0.656	0.84
381_Q	407_Q	0.656	0.84
347_L	374_L	0.656	0.84
54_L	72_R	0.655	0.84
107_E	111_A	0.654	0.84
86_P	112_D	0.654	0.84
97_N	103_I	0.653	0.84
28_N	82_P	0.652	0.84
235_M	239_F	0.652	0.84
144_L	147_P	0.651	0.84
274_A	320_T	0.651	0.84
225_R	237_E	0.650	0.83
233_L	236_A	0.650	0.83
102_N	108_P	0.648	0.83
85_V	88_G	0.648	0.83
84_S	113_A	0.646	0.83
139_I	414_F	0.645	0.83
259_Q	320_T	0.644	0.83
270_R	293_T	0.644	0.83
123_P	295_T	0.643	0.83
156_L	329_T	0.643	0.83
353_A	359_V	0.640	0.83
43_G	46_L	0.640	0.83
18_F	24_P	0.638	0.82
110_P	113_A	0.637	0.82
419_Q	425_G	0.634	0.82
31_K	45_D	0.634	0.82
362_E	366_V	0.634	0.82
363_H	367_A	0.634	0.82
59_V	76_A	0.631	0.82
390_D	393_G	0.631	0.82
46_L	50_V	0.631	0.82
400_V	404_R	0.621	0.81
234_T	238_H	0.620	0.81
237_E	240_R	0.617	0.80
137_T	292_I	0.616	0.80
102_N	106_N	0.616	0.80
14_V	67_T	0.614	0.80
162_V	333_R	0.613	0.80
150_K	178_E	0.610	0.79
134_I	353_A	0.610	0.79
163_G	252_D	0.610	0.79
201_E	204_D	0.609	0.79
47_T	69_G	0.608	0.79
160_A	322_F	0.605	0.79
229_A	251_I	0.605	0.79
214_V	231_T	0.602	0.79
382_D	389_M	0.600	0.78
135_L	178_E	0.600	0.78
12_P	18_F	0.599	0.78
392_L	400_V	0.599	0.78
35_P	75_E	0.598	0.78
386_I	389_M	0.597	0.78
55_G	60_R	0.597	0.78
323_A	350_T	0.594	0.78
117_P	234_T	0.593	0.78
136_E	423_Q	0.591	0.77
173_N	205_S	0.590	0.77
381_Q	404_R	0.589	0.77
174_N	417_A	0.588	0.77
373_T	399_V	0.587	0.77
421_T	425_G	0.586	0.77
420_F	423_Q	0.585	0.77
430_V	434_V	0.585	0.77
47_T	66_S	0.585	0.77
144_L	427_Y	0.584	0.76
13_V	172_I	0.584	0.76
32_I	59_V	0.584	0.76
156_L	331_L	0.584	0.76
395_E	399_V	0.583	0.76
254_I	288_L	0.583	0.76
15_D	18_F	0.581	0.76
87_V	112_D	0.581	0.76
14_V	18_F	0.581	0.76
226_M	264_V	0.579	0.76
60_R	268_L	0.579	0.76
62_I	382_D	0.578	0.76
159_G	308_V	0.578	0.76
263_E	277_Y	0.578	0.76
373_T	376_R	0.577	0.76
380_L	385_A	0.577	0.76
130_T	357_E	0.577	0.76
102_N	109_V	0.577	0.76
185_F	195_G	0.576	0.75
35_P	71_Q	0.575	0.75
274_A	398_L	0.574	0.75
106_N	208_I	0.573	0.75
19_E	24_P	0.572	0.75
270_R	280_T	0.571	0.75
121_Q	287_Q	0.571	0.75
50_V	83_I	0.568	0.74
240_R	300_V	0.566	0.74
120_R	123_P	0.566	0.74
314_T	321_T	0.566	0.74
377_Y	407_Q	0.565	0.74
355_A	414_F	0.565	0.74
120_R	234_T	0.563	0.74
146_A	344_V	0.563	0.74
409_F	430_V	0.563	0.74
14_V	23_L	0.563	0.74
79_T	82_P	0.561	0.74
18_F	172_I	0.561	0.74
262_S	317_A	0.560	0.73
99_L	386_I	0.559	0.73
335_L	338_M	0.558	0.73
409_F	426_S	0.558	0.73
419_Q	423_Q	0.556	0.73
394_E	400_V	0.556	0.73
225_R	259_Q	0.554	0.73
25_E	54_L	0.554	0.73
164_K	252_D	0.554	0.73
339_G	372_S	0.553	0.72
19_E	29_A	0.552	0.72
203_S	211_T	0.551	0.72
428_V	432_E	0.550	0.72
154_I	329_T	0.549	0.72
160_A	259_Q	0.549	0.72
90_V	107_E	0.549	0.72
129_S	296_N	0.549	0.72
202_M	207_V	0.548	0.72
23_L	267_L	0.545	0.71
404_R	407_Q	0.543	0.71
23_L	27_Y	0.542	0.71
169_Q	215_F	0.541	0.71
29_A	83_I	0.541	0.71
64_M	230_L	0.541	0.71
103_I	215_F	0.540	0.71
323_A	328_T	0.539	0.71
257_F	261_G	0.538	0.70
157_F	325_L	0.538	0.70
16_V	59_V	0.537	0.70
132_V	297_V	0.537	0.70
398_L	402_R	0.536	0.70
200_Y	205_S	0.535	0.70
203_S	209_N	0.535	0.70
35_P	43_G	0.533	0.70
46_L	51_A	0.532	0.70
119_H	230_L	0.532	0.70
271_M	279_P	0.532	0.70
432_E	435_Q	0.532	0.70
29_A	35_P	0.530	0.69
365_A	431_K	0.530	0.69
195_G	217_Q	0.529	0.69
87_V	91_T	0.528	0.69
23_L	26_I	0.527	0.69
152_G	352_R	0.527	0.69
62_I	268_L	0.527	0.69
241_D	247_V	0.525	0.69
408_F	429_P	0.525	0.69
208_I	213_M	0.524	0.68
133_E	297_V	0.524	0.68
160_A	323_A	0.524	0.68
184_V	214_V	0.523	0.68
171_L	303_I	0.523	0.68
105_L	408_F	0.521	0.68
156_L	305_A	0.519	0.68
181_G	210_K	0.519	0.68
370_V	427_Y	0.518	0.68
91_T	111_A	0.518	0.68
28_N	79_T	0.517	0.67
17_R	394_E	0.517	0.67
61_T	76_A	0.517	0.67
310_A	319_A	0.517	0.67
144_L	363_H	0.516	0.67
99_L	224_A	0.516	0.67
266_A	271_M	0.514	0.67
426_S	429_P	0.514	0.67
28_N	83_I	0.514	0.67
140_K	426_S	0.514	0.67
326_D	352_R	0.513	0.67
147_P	350_T	0.513	0.67
230_L	268_L	0.512	0.67
59_V	72_R	0.512	0.67
65_A	208_I	0.511	0.67
169_Q	198_L	0.511	0.67
120_R	125_F	0.510	0.66
187_G	190_E	0.510	0.66
120_R	237_E	0.509	0.66
308_V	314_T	0.507	0.66
414_F	418_E	0.507	0.66
119_H	287_Q	0.506	0.66
258_T	262_S	0.506	0.66
362_E	428_V	0.506	0.66
333_R	337_E	0.505	0.66
233_L	237_E	0.505	0.66
141_V	340_I	0.505	0.66
139_I	170_E	0.504	0.66
52_L	268_L	0.503	0.65
425_G	429_P	0.503	0.65
158_G	170_E	0.502	0.65
363_H	366_V	0.502	0.65
18_F	30_I	0.501	0.65
165_T	252_D	0.500	0.65

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4q4lA	1	0.9175	100	0.111	Contact Map
1fx0B	3	0.9704	100	0.111	Contact Map
3oaaA	2	0.9556	100	0.112	Contact Map
2qe7A	1	0.9556	100	0.117	Contact Map
2ck3A	1	0.9619	100	0.13	Contact Map
2r9vA	1	0.9619	100	0.131	Contact Map
1fx0A	1	0.9598	100	0.132	Contact Map
3vr4D	1	0.9239	100	0.139	Contact Map
3gqbB	1	0.9239	100	0.143	Contact Map
2c61A	2	0.8879	100	0.144	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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