YABM - BACSU - GREMLIN Contacts

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YABM - Uncharacterized membrane protein YabM

UniProt:	P37555	Sequences: MDDSIGVKRHWIWQGAFVLILAGVITKILSAVYRVPFQNIVGDVGFYIYQQVYPFLGIAVMLSTSGFPVIISKLMNDYSEKNHHTILKISALFLSLIGILLFLCLYLGAVPIALFMGDSHLAVLIQVAAYAFLLFPFVALLRGGFQGRHEMLPSALSQMTEQFLRVAVLLGLSFWLVKKGASLYTAGAAAASGSLAGSLVALIILGFFWFKTKRDNQTDRQNENVITTKELTKKLLLYSVTICVSSLLLLFIQLVDALNLYALLSGGEASEEAKCLKGIYDRGQPLLQLGSVFAVSIATSLVPYISMAVKNKELKIMKEKITSSLKLCLVLGTGASAGLICILKPVNIMLFQNGEGTGALQVFSCSILFASLAVTAAAVLQGAGYTVFPAIAVGAGVAVKWVLNTLLVPRYGIEGASLATAASFAAVAGLNLYQLRQKEWLDKLRGVLIPIIGSALLMSAVLLAYTRLWTFLFPATGRGAAVIESLSAVAIGGAVFIYCMMRLGIFTDEELNSVPFGSKLSKFMRRREQNGG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	532 (462)
Sequences:	15024 (12894)
Seq/√Len:	599.9

ECOLI - WZXC MURJ RFBX WZXE YGHQ
BACSU - YABM SP5B YTGP TUAB EPSK YKVU
HALSA - Q9HRT3 Q9HSW2 Q9HQQ5
SULSO - Q97XG2 Q7LXE2 Q97XT3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
313_E	316_I	5.263	1.00
458_M	462_L	3.680	1.00
233_K	237_L	3.541	1.00
108_G	111_P	3.305	1.00
150_E	153_P	2.980	1.00
50_Q	281_D	2.940	1.00
385_Y	388_F	2.892	1.00
357_T	361_Q	2.778	1.00
351_F	354_G	2.758	1.00
340_I	361_Q	2.678	1.00
446_G	449_I	2.649	1.00
149_H	307_M	2.584	1.00
385_Y	438_K	2.564	1.00
387_V	391_I	2.469	1.00
256_D	280_Y	2.463	1.00
343_L	357_T	2.433	1.00
75_M	147_G	2.368	1.00
106_Y	126_Q	2.342	1.00
396_G	427_V	2.230	1.00
362_V	414_E	2.197	1.00
256_D	404_N	2.189	1.00
352_Q	355_E	2.171	1.00
403_L	419_A	2.169	1.00
344_K	348_I	2.137	1.00
338_G	342_I	2.125	1.00
343_L	361_Q	2.111	1.00
122_A	126_Q	2.098	1.00
411_Y	418_L	2.074	1.00
259_N	408_V	2.073	1.00
369_F	425_A	2.057	1.00
307_M	311_N	2.042	1.00
308_A	316_I	2.037	1.00
338_G	489_V	2.031	1.00
244_V	390_A	2.017	1.00
319_E	323_S	2.009	1.00
74_L	238_Y	1.999	1.00
359_A	413_I	1.980	1.00
362_V	421_A	1.940	1.00
392_A	430_L	1.938	1.00
493_G	497_I	1.936	1.00
18_V	152_L	1.908	1.00
110_V	122_A	1.906	1.00
256_D	420_T	1.905	1.00
455_A	458_M	1.896	1.00
229_K	233_K	1.884	1.00
330_V	500_M	1.860	1.00
408_V	416_A	1.856	1.00
321_I	379_V	1.847	1.00
314_L	318_K	1.840	1.00
42_G	45_G	1.839	1.00
85_T	228_T	1.834	1.00
446_G	450_P	1.822	1.00
259_N	404_N	1.821	1.00
450_P	453_G	1.812	1.00
453_G	457_L	1.784	1.00
407_L	411_Y	1.783	1.00
457_L	461_V	1.764	1.00
228_T	231_L	1.757	1.00
342_I	345_P	1.746	1.00
109_A	126_Q	1.738	1.00
316_I	319_E	1.720	1.00
332_G	371_S	1.719	1.00
399_V	426_A	1.709	1.00
404_N	408_V	1.702	1.00
105_L	129_A	1.699	1.00
10_H	14_Q	1.691	1.00
450_P	454_S	1.684	1.00
461_V	495_V	1.677	1.00
73_K	77_D	1.675	1.00
415_G	419_A	1.650	1.00
336_S	368_L	1.637	1.00
309_V	383_A	1.630	1.00
362_V	417_S	1.618	1.00
342_I	346_V	1.609	1.00
429_G	433_Y	1.595	1.00
305_I	317_M	1.593	1.00
165_R	169_L	1.575	1.00
77_D	384_G	1.570	1.00
454_S	458_M	1.565	1.00
52_V	128_A	1.563	1.00
84_H	88_K	1.560	1.00
344_K	361_Q	1.547	1.00
344_K	357_T	1.534	1.00
351_F	355_E	1.533	1.00
248_L	394_G	1.522	1.00
39_N	352_Q	1.517	1.00
347_N	356_G	1.510	1.00
260_L	277_K	1.508	1.00
38_Q	282_R	1.500	1.00
189_A	193_G	1.499	1.00
162_Q	165_R	1.496	1.00
345_P	348_I	1.483	1.00
447_V	450_P	1.482	1.00
276_L	413_I	1.479	1.00
447_V	451_I	1.477	1.00
391_I	395_A	1.470	1.00
315_K	319_E	1.469	1.00
369_F	428_A	1.468	1.00
87_L	144_G	1.460	1.00
170_L	174_F	1.455	1.00
463_L	467_R	1.437	1.00
362_V	418_L	1.437	1.00
366_S	421_A	1.436	1.00
358_G	414_E	1.435	1.00
149_H	304_Y	1.431	1.00
358_G	361_Q	1.423	1.00
419_A	423_S	1.422	1.00
301_L	324_S	1.410	1.00
318_K	322_T	1.405	1.00
24_V	28_I	1.397	1.00
392_A	434_Q	1.396	1.00
339_L	364_S	1.394	1.00
317_M	379_V	1.388	1.00
445_R	449_I	1.386	1.00
412_G	415_G	1.382	1.00
117_G	120_H	1.375	1.00
402_V	406_L	1.372	1.00
400_K	404_N	1.371	1.00
406_L	409_P	1.371	1.00
433_Y	437_Q	1.360	1.00
264_L	276_L	1.357	1.00
144_G	148_R	1.352	1.00
259_N	405_T	1.352	1.00
359_A	417_S	1.351	1.00
283_G	359_A	1.349	1.00
51_Q	261_Y	1.338	1.00
451_I	454_S	1.334	1.00
347_N	360_L	1.328	1.00
49_Y	53_Y	1.324	1.00
255_V	401_W	1.321	1.00
168_V	171_G	1.320	1.00
400_K	420_T	1.320	1.00
260_L	264_L	1.313	1.00
34_R	285_P	1.307	1.00
496_F	500_M	1.298	1.00
316_I	320_K	1.297	1.00
458_M	461_V	1.284	1.00
459_S	463_L	1.283	1.00
124_L	191_A	1.283	1.00
407_L	419_A	1.276	1.00
50_Q	278_G	1.270	1.00
152_L	156_L	1.270	1.00
365_C	421_A	1.268	1.00
407_L	410_R	1.262	1.00
336_S	340_I	1.257	1.00
109_A	122_A	1.251	1.00
347_N	357_T	1.251	1.00
309_V	317_M	1.250	1.00
150_E	212_T	1.249	1.00
264_L	413_I	1.241	1.00
43_D	279_I	1.239	1.00
406_L	410_R	1.237	1.00
110_V	126_Q	1.236	1.00
464_A	467_R	1.234	1.00
314_L	383_A	1.231	1.00
449_I	453_G	1.228	1.00
404_N	407_L	1.227	1.00
25_I	159_M	1.227	1.00
497_I	501_M	1.222	1.00
260_L	416_A	1.217	1.00
90_S	235_L	1.215	1.00
308_A	320_K	1.212	1.00
499_C	503_L	1.209	1.00
71_I	90_S	1.206	1.00
31_A	35_V	1.205	1.00
279_I	356_G	1.202	1.00
93_F	232_T	1.201	1.00
70_I	238_Y	1.200	1.00
450_P	458_M	1.196	1.00
80_E	311_N	1.192	1.00
168_V	172_L	1.189	1.00
338_G	492_G	1.189	1.00
206_G	210_F	1.185	1.00
399_V	403_L	1.183	1.00
462_L	466_T	1.183	1.00
322_T	326_K	1.179	1.00
404_N	420_T	1.179	1.00
392_A	431_N	1.178	1.00
161_E	165_R	1.177	1.00
278_G	282_R	1.174	1.00
321_I	376_A	1.172	1.00
241_T	390_A	1.171	1.00
489_V	493_G	1.169	1.00
339_L	360_L	1.168	1.00
457_L	465_Y	1.165	1.00
463_L	466_T	1.163	1.00
165_R	168_V	1.162	1.00
203_I	207_F	1.155	1.00
77_D	81_K	1.154	1.00
171_G	175_W	1.148	1.00
43_D	278_G	1.148	1.00
77_D	234_K	1.148	1.00
414_E	417_S	1.147	1.00
89_I	232_T	1.142	1.00
433_Y	436_R	1.136	1.00
486_L	490_A	1.134	1.00
76_N	147_G	1.134	1.00
102_F	106_Y	1.130	1.00
133_L	136_P	1.125	1.00
35_V	39_N	1.121	1.00
113_A	121_L	1.120	1.00
450_P	457_L	1.118	1.00
457_L	499_C	1.115	1.00
305_I	382_G	1.115	1.00
107_L	110_V	1.112	1.00
443_K	446_G	1.109	1.00
240_V	244_V	1.108	1.00
329_L	333_T	1.108	1.00
172_L	177_V	1.107	1.00
283_G	356_G	1.102	1.00
376_A	431_N	1.101	1.00
256_D	400_K	1.101	1.00
411_Y	415_G	1.099	1.00
394_G	398_A	1.096	1.00
164_L	168_V	1.090	1.00
287_L	363_F	1.082	1.00
398_A	402_V	1.079	1.00
78_Y	83_H	1.078	1.00
70_I	235_L	1.076	1.00
234_K	384_G	1.075	1.00
134_L	199_L	1.074	1.00
192_S	196_A	1.074	1.00
22_A	155_A	1.072	1.00
251_F	397_V	1.065	1.00
302_V	306_S	1.063	1.00
151_M	300_S	1.062	1.00
265_S	276_L	1.061	1.00
346_V	350_L	1.060	1.00
308_A	313_E	1.054	1.00
460_A	464_A	1.047	1.00
96_L	99_I	1.044	1.00
106_Y	110_V	1.042	1.00
391_I	394_G	1.041	1.00
188_A	191_A	1.040	1.00
19_L	300_S	1.039	1.00
238_Y	386_T	1.034	1.00
334_G	496_F	1.033	1.00
34_R	351_F	1.031	1.00
173_S	176_L	1.030	1.00
168_V	193_G	1.029	1.00
403_L	407_L	1.026	1.00
167_A	171_G	1.023	1.00
74_L	77_D	1.022	1.00
11_W	14_Q	1.021	1.00
70_I	239_S	1.018	1.00
85_T	89_I	1.016	1.00
164_L	200_V	1.014	1.00
254_L	257_A	1.014	1.00
193_G	197_G	1.012	1.00
430_L	434_Q	1.009	1.00
109_A	113_A	1.006	1.00
28_I	32_V	1.002	1.00
430_L	433_Y	1.000	1.00
126_Q	130_Y	1.000	1.00
283_G	363_F	0.999	1.00
96_L	100_L	0.994	1.00
379_V	435_L	0.988	1.00
192_S	195_L	0.986	1.00
64_T	68_P	0.986	1.00
400_K	423_S	0.985	1.00
342_I	488_A	0.983	1.00
359_A	414_E	0.982	1.00
436_R	439_E	0.982	1.00
381_Q	389_P	0.981	1.00
444_L	447_V	0.981	1.00
263_L	266_G	0.980	1.00
248_L	390_A	0.979	1.00
337_A	341_C	0.974	1.00
260_L	280_Y	0.972	1.00
57_G	61_M	0.970	1.00
376_A	432_L	0.968	1.00
315_K	318_K	0.967	1.00
123_V	188_A	0.966	1.00
340_I	343_L	0.965	1.00
372_L	428_A	0.964	1.00
102_F	105_L	0.962	1.00
462_L	465_Y	0.959	1.00
86_I	90_S	0.957	1.00
395_A	430_L	0.955	1.00
349_M	485_S	0.954	1.00
47_Y	278_G	0.951	1.00
451_I	455_A	0.950	1.00
130_Y	195_L	0.947	1.00
92_L	96_L	0.947	1.00
264_L	275_C	0.946	1.00
455_A	459_S	0.946	1.00
462_L	492_G	0.944	1.00
33_Y	166_V	0.944	1.00
104_C	108_G	0.943	1.00
129_A	133_L	0.941	1.00
130_Y	133_L	0.939	1.00
35_V	351_F	0.937	1.00
453_G	458_M	0.934	1.00
47_Y	266_G	0.934	1.00
241_T	387_V	0.933	1.00
165_R	197_G	0.933	1.00
280_Y	363_F	0.932	1.00
260_L	413_I	0.932	1.00
75_M	148_R	0.932	1.00
109_A	129_A	0.932	1.00
266_G	275_C	0.930	1.00
366_S	417_S	0.928	1.00
16_A	300_S	0.926	1.00
157_S	204_I	0.923	1.00
26_T	162_Q	0.923	1.00
451_I	458_M	0.922	1.00
16_A	297_I	0.922	1.00
261_Y	277_K	0.921	1.00
380_L	434_Q	0.917	1.00
241_T	386_T	0.917	1.00
52_V	124_L	0.916	1.00
338_G	493_G	0.915	1.00
36_P	40_I	0.913	1.00
448_L	452_I	0.912	1.00
95_S	99_I	0.911	1.00
489_V	492_G	0.906	1.00
275_C	279_I	0.903	1.00
458_M	492_G	0.903	1.00
337_A	459_S	0.903	1.00
102_F	133_L	0.899	1.00
252_I	400_K	0.895	1.00
300_S	303_P	0.893	1.00
356_G	359_A	0.893	1.00
421_A	424_F	0.892	1.00
426_A	430_L	0.892	1.00
227_T	232_T	0.891	1.00
418_L	422_A	0.890	1.00
481_A	484_E	0.889	1.00
484_E	488_A	0.888	1.00
242_I	386_T	0.886	1.00
488_A	492_G	0.883	1.00
464_A	468_L	0.882	1.00
409_P	416_A	0.880	1.00
245_S	389_P	0.879	1.00
278_G	281_D	0.878	1.00
343_L	360_L	0.877	1.00
35_V	38_Q	0.873	1.00
78_Y	81_K	0.873	1.00
259_N	263_L	0.873	1.00
111_P	115_F	0.872	1.00
454_S	499_C	0.871	1.00
88_K	92_L	0.870	1.00
13_W	17_F	0.868	1.00
340_I	365_C	0.865	1.00
466_T	470_T	0.863	1.00
111_P	114_L	0.860	1.00
51_Q	277_K	0.860	1.00
434_Q	437_Q	0.860	1.00
334_G	337_A	0.859	1.00
403_L	422_A	0.852	1.00
107_L	111_P	0.852	1.00
37_F	190_A	0.851	1.00
410_R	414_E	0.850	1.00
98_G	136_P	0.849	1.00
366_S	369_F	0.848	1.00
445_R	450_P	0.845	1.00
248_L	397_V	0.844	1.00
166_V	170_L	0.842	1.00
123_V	126_Q	0.840	1.00
14_Q	152_L	0.839	1.00
443_K	450_P	0.835	1.00
388_F	434_Q	0.835	1.00
404_N	416_A	0.834	1.00
72_S	143_G	0.834	1.00
392_A	396_G	0.831	1.00
38_Q	351_F	0.831	1.00
12_I	16_A	0.831	1.00
457_L	462_L	0.830	1.00
54_P	257_A	0.828	1.00
349_M	482_V	0.825	1.00
204_I	208_F	0.824	1.00
449_I	455_A	0.822	1.00
282_R	285_P	0.822	1.00
42_G	354_G	0.821	1.00
100_L	104_C	0.821	1.00
134_L	202_L	0.820	1.00
103_L	107_L	0.817	1.00
449_I	457_L	0.815	1.00
342_I	492_G	0.815	1.00
443_K	447_V	0.813	1.00
347_N	351_F	0.813	1.00
361_Q	365_C	0.813	1.00
345_P	488_A	0.812	1.00
280_Y	284_Q	0.810	1.00
35_V	350_L	0.809	1.00
231_L	234_K	0.806	1.00
43_D	354_G	0.806	1.00
248_L	393_V	0.805	1.00
79_S	82_N	0.805	1.00
237_L	387_V	0.805	1.00
99_I	103_L	0.800	1.00
40_I	174_F	0.799	1.00
172_L	175_W	0.798	1.00
188_A	192_S	0.798	1.00
71_I	75_M	0.797	1.00
380_L	389_P	0.793	1.00
236_L	239_S	0.790	1.00
405_T	409_P	0.789	1.00
265_S	277_K	0.786	1.00
134_L	195_L	0.785	1.00
283_G	360_L	0.785	1.00
40_I	173_S	0.784	1.00
376_A	428_A	0.783	1.00
236_L	240_V	0.782	1.00
282_R	351_F	0.782	1.00
113_A	122_A	0.780	1.00
46_F	50_Q	0.780	1.00
157_S	205_L	0.779	1.00
17_F	21_L	0.777	1.00
171_G	174_F	0.774	1.00
73_K	384_G	0.773	1.00
19_L	155_A	0.772	1.00
60_V	64_T	0.771	1.00
447_V	458_M	0.771	1.00
447_V	455_A	0.770	1.00
23_G	27_K	0.769	1.00
168_V	196_A	0.768	1.00
15_G	149_H	0.767	1.00
91_A	141_L	0.766	1.00
207_F	211_K	0.765	1.00
418_L	421_A	0.764	1.00
340_I	364_S	0.764	1.00
142_R	146_Q	0.764	1.00
304_Y	307_M	0.764	1.00
190_A	193_G	0.761	1.00
454_S	457_L	0.761	1.00
389_P	393_V	0.758	1.00
49_Y	190_A	0.757	1.00
498_Y	502_R	0.752	1.00
73_K	382_G	0.747	1.00
317_M	383_A	0.745	1.00
257_A	277_K	0.739	1.00
320_K	324_S	0.737	1.00
306_S	310_K	0.737	1.00
67_F	90_S	0.736	1.00
153_P	208_F	0.735	1.00
365_C	368_L	0.734	1.00
388_F	391_I	0.732	1.00
452_I	455_A	0.726	1.00
467_R	470_T	0.726	1.00
265_S	275_C	0.723	1.00
323_S	326_K	0.722	1.00
302_V	382_G	0.721	1.00
308_A	311_N	0.721	1.00
74_L	78_Y	0.719	1.00
340_I	344_K	0.719	1.00
256_D	284_Q	0.717	1.00
45_G	48_I	0.716	1.00
328_C	371_S	0.713	1.00
294_A	298_A	0.712	1.00
141_L	206_G	0.710	1.00
18_V	22_A	0.710	1.00
485_S	489_V	0.709	1.00
326_K	330_V	0.708	1.00
238_Y	242_I	0.708	1.00
403_L	406_L	0.707	1.00
169_L	193_G	0.705	1.00
125_I	129_A	0.704	1.00
106_Y	109_A	0.703	1.00
287_L	367_I	0.702	1.00
102_F	129_A	0.702	1.00
297_I	301_L	0.699	1.00
66_G	239_S	0.699	1.00
21_L	25_I	0.698	1.00
254_L	258_L	0.698	1.00
145_F	209_W	0.696	1.00
131_A	198_S	0.694	1.00
230_E	233_K	0.693	1.00
194_S	198_S	0.692	1.00
328_C	375_T	0.691	1.00
78_Y	231_L	0.691	1.00
237_L	240_V	0.689	1.00
48_I	266_G	0.688	1.00
335_A	338_G	0.688	1.00
195_L	198_S	0.685	1.00
72_S	76_N	0.685	1.00
43_D	275_C	0.684	1.00
208_F	212_T	0.681	1.00
395_A	398_A	0.680	1.00
93_F	97_I	0.680	1.00
304_Y	308_A	0.678	1.00
255_V	259_N	0.677	1.00
286_L	351_F	0.676	1.00
394_G	397_V	0.675	1.00
285_P	288_Q	0.675	1.00
287_L	290_G	0.673	1.00
414_E	418_L	0.673	1.00
197_G	201_A	0.671	1.00
160_T	204_I	0.669	1.00
41_V	187_G	0.669	1.00
64_T	94_L	0.669	1.00
450_P	465_Y	0.669	1.00
79_S	148_R	0.669	1.00
164_L	167_A	0.666	1.00
434_Q	438_K	0.665	1.00
302_V	378_A	0.665	1.00
34_R	38_Q	0.665	1.00
461_V	464_A	0.665	1.00
19_L	151_M	0.664	1.00
365_C	369_F	0.663	1.00
20_I	296_S	0.663	1.00
16_A	20_I	0.660	1.00
127_V	191_A	0.657	1.00
482_V	489_V	0.657	1.00
110_V	114_L	0.654	1.00
56_L	132_F	0.654	1.00
156_L	160_T	0.654	1.00
195_L	199_L	0.653	1.00
345_P	484_E	0.653	1.00
74_L	234_K	0.650	1.00
366_S	420_T	0.650	1.00
164_L	169_L	0.650	1.00
190_A	194_S	0.649	1.00
51_Q	54_P	0.649	1.00
390_A	394_G	0.649	1.00
72_S	147_G	0.647	1.00
363_F	417_S	0.646	1.00
339_L	346_V	0.642	1.00
285_P	289_L	0.641	1.00
459_S	462_L	0.640	1.00
99_I	133_L	0.639	1.00
417_S	421_A	0.638	1.00
435_L	438_K	0.637	1.00
263_L	408_V	0.637	1.00
10_H	13_W	0.637	1.00
123_V	127_V	0.635	1.00
336_S	364_S	0.633	1.00
445_R	448_L	0.632	1.00
404_N	419_A	0.631	1.00
425_A	429_G	0.629	1.00
70_I	74_L	0.628	1.00
386_T	389_P	0.627	1.00
135_F	198_S	0.627	1.00
108_G	112_I	0.624	1.00
98_G	102_F	0.622	1.00
127_V	192_S	0.622	1.00
235_L	239_S	0.621	1.00
88_K	216_N	0.621	1.00
91_A	94_L	0.621	1.00
47_Y	277_K	0.620	1.00
73_K	386_T	0.619	1.00
495_V	499_C	0.619	1.00
53_Y	57_G	0.618	1.00
25_I	29_L	0.618	1.00
401_W	405_T	0.617	1.00
109_A	112_I	0.617	1.00
41_V	45_G	0.616	1.00
105_L	125_I	0.615	1.00
126_Q	129_A	0.615	1.00
252_I	397_V	0.615	1.00
348_I	357_T	0.614	1.00
461_V	465_Y	0.612	1.00
250_L	254_L	0.611	1.00
399_V	402_V	0.611	1.00
447_V	454_S	0.610	1.00
201_A	205_L	0.610	1.00
85_T	88_K	0.607	1.00
324_S	375_T	0.604	1.00
480_A	484_E	0.604	1.00
89_I	93_F	0.603	1.00
277_K	281_D	0.602	1.00
15_G	300_S	0.601	1.00
329_L	368_L	0.600	1.00
169_L	173_S	0.599	1.00
432_L	436_R	0.599	1.00
308_A	317_M	0.599	1.00
172_L	176_L	0.598	1.00
360_L	364_S	0.597	1.00
230_E	234_K	0.594	1.00
348_I	352_Q	0.592	1.00
343_L	364_S	0.591	1.00
314_L	317_M	0.591	1.00
205_L	208_F	0.588	1.00
234_K	238_Y	0.588	1.00
22_A	159_M	0.587	1.00
370_A	374_V	0.586	1.00
101_L	105_L	0.584	1.00
466_T	469_W	0.584	1.00
453_G	461_V	0.583	1.00
29_L	33_Y	0.583	1.00
46_F	282_R	0.581	1.00
242_I	381_Q	0.581	1.00
77_D	310_K	0.580	1.00
13_W	16_A	0.580	1.00
51_Q	257_A	0.577	1.00
170_L	173_S	0.575	1.00
378_A	381_Q	0.573	1.00
445_R	455_A	0.573	1.00
11_W	149_H	0.572	1.00
465_Y	468_L	0.570	1.00
436_R	440_W	0.568	1.00
75_M	87_L	0.567	1.00
281_D	285_P	0.565	1.00
106_Y	129_A	0.563	1.00
56_L	60_V	0.562	1.00
500_M	503_L	0.561	1.00
68_P	143_G	0.561	1.00
320_K	323_S	0.561	1.00
247_L	251_F	0.560	1.00
366_S	424_F	0.560	1.00
402_V	405_T	0.560	1.00
29_L	166_V	0.560	1.00
92_L	218_T	0.558	1.00
487_S	490_A	0.557	1.00
444_L	448_L	0.557	1.00
284_Q	288_Q	0.557	1.00
461_V	491_I	0.557	1.00
86_I	231_L	0.557	1.00
232_T	236_L	0.554	0.99
421_A	425_A	0.553	0.99
499_C	502_R	0.553	0.99
89_I	227_T	0.553	0.99
176_L	189_A	0.552	0.99
424_F	428_A	0.551	0.99
420_T	423_S	0.550	0.99
380_L	435_L	0.550	0.99
109_A	125_I	0.550	0.99
383_A	438_K	0.549	0.99
280_Y	417_S	0.547	0.99
458_M	466_T	0.546	0.99
207_F	210_F	0.546	0.99
457_L	460_A	0.545	0.99
455_A	462_L	0.545	0.99
482_V	486_L	0.541	0.99
385_Y	389_P	0.541	0.99
92_L	95_S	0.541	0.99
454_S	462_L	0.541	0.99
210_F	214_R	0.540	0.99
335_A	339_L	0.540	0.99
110_V	113_A	0.539	0.99
256_D	259_N	0.539	0.99
347_N	355_E	0.538	0.99
295_V	299_T	0.537	0.99
89_I	92_L	0.536	0.99
378_A	382_G	0.536	0.99
48_I	124_L	0.535	0.99
338_G	458_M	0.534	0.99
454_S	461_V	0.532	0.99
30_S	34_R	0.532	0.99
348_I	351_F	0.531	0.99
202_L	206_G	0.531	0.99
210_F	213_K	0.531	0.99
390_A	393_V	0.531	0.99
491_I	494_A	0.531	0.99
296_S	299_T	0.531	0.99
396_G	423_S	0.531	0.99
407_L	415_G	0.530	0.99
146_Q	154_S	0.530	0.99
376_A	435_L	0.529	0.99
448_L	451_I	0.529	0.99
450_P	462_L	0.529	0.99
94_L	98_G	0.529	0.99
461_V	492_G	0.528	0.99
480_A	483_I	0.528	0.99
348_I	481_A	0.527	0.99
86_I	235_L	0.526	0.99
153_P	156_L	0.526	0.99
58_I	250_L	0.525	0.99
449_I	458_M	0.524	0.99
89_I	229_K	0.524	0.99
43_D	355_E	0.524	0.99
492_G	496_F	0.521	0.99
37_F	169_L	0.521	0.99
85_T	226_I	0.521	0.99
337_A	340_I	0.520	0.99
20_I	24_V	0.520	0.99
490_A	494_A	0.518	0.99
71_I	86_I	0.516	0.99
333_T	455_A	0.516	0.99
137_F	202_L	0.516	0.99
145_F	153_P	0.514	0.99
162_Q	166_V	0.513	0.99
400_K	403_L	0.513	0.99
88_K	91_A	0.512	0.99
141_L	209_W	0.512	0.99
132_F	136_P	0.511	0.99
451_I	457_L	0.510	0.99
63_S	136_P	0.510	0.99
399_V	423_S	0.509	0.99
450_P	455_A	0.509	0.99
328_C	332_G	0.508	0.99
127_V	131_A	0.508	0.99
143_G	147_G	0.508	0.99
306_S	309_V	0.508	0.99
245_S	393_V	0.507	0.99
245_S	248_L	0.506	0.99
317_M	320_K	0.506	0.99
187_G	190_A	0.505	0.99
87_L	141_L	0.505	0.99
317_M	321_I	0.504	0.99
127_V	188_A	0.502	0.99
37_F	41_V	0.501	0.99
498_Y	501_M	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4lz6A	1	0.8026	100	0.429	Contact Map
3w4tA	1	0.7876	100	0.446	Contact Map
4humA	1	0.8252	100	0.448	Contact Map
3mktA	1	0.8195	100	0.462	Contact Map
3wdoA	1	0.7632	67.3	0.943	Contact Map
4pypA	1	0.7594	60.8	0.945	Contact Map
3o7qA	1	0.7143	56.4	0.947	Contact Map
1pw4A	1	0.7538	54.4	0.947	Contact Map
4xnjA	1	0.718	35.8	0.953	Contact Map
4tphA	2	0.7575	29.6	0.955	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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