GREMLIN Database
YYCA - Putative mannosyltransferase YycA
UniProt: P37483 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 685 (648)
Sequences: 144 (114)
Seq/√Len: 4.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
189_V211_L5.7650.98
613_V640_L4.3010.90
613_V616_L4.0410.87
576_E624_K3.4940.78
60_V610_I3.3580.75
71_I75_F3.2320.72
59_F599_M3.1630.70
75_F78_I3.1460.70
617_K647_N2.9510.64
602_G606_G2.9430.64
14_L99_F2.8810.62
43_T656_Y2.8500.61
616_L640_L2.7250.58
21_N93_A2.7020.57
45_S223_I2.6680.56
72_Q218_S2.6190.55
240_Q246_E2.6160.54
135_N248_A2.5450.52
97_S145_L2.5330.52
96_G142_F2.4970.51
600_A611_L2.4750.50
367_I374_S2.4670.50
240_Q609_P2.4390.49
75_F625_V2.4210.49
380_G442_M2.4130.48
115_R203_K2.4110.48
74_I375_L2.4100.48
78_I617_K2.3590.47
34_Y238_S2.3430.46
579_F590_Y2.3310.46
184_V188_F2.3200.45
84_W141_V2.2850.44
114_A483_W2.2770.44
104_M203_K2.2720.44
67_V172_L2.2500.43
86_V114_A2.2160.42
90_Q141_V2.2160.42
529_T533_Y2.2090.42
184_V519_L2.1870.41
147_G166_A2.1590.41
236_V244_V2.1460.40
255_E546_L2.1350.40
561_D651_I2.1250.40
25_I142_F2.1180.39
619_L624_K2.1150.39
67_V146_L2.1090.39
37_A59_F2.1040.39
370_M373_F1.9980.36
238_S648_G1.9680.35
221_W457_L1.9600.35
83_T595_N1.9590.35
153_R379_L1.9300.34
563_G656_Y1.9190.34
166_A563_G1.9120.34
17_A468_Q1.9030.33
62_V248_A1.8960.33
653_S657_S1.8840.33
569_R596_E1.8800.33
75_F460_A1.8780.33
68_V248_A1.8680.32
51_Y215_T1.8620.32
53_S436_G1.8430.32
465_A527_S1.8370.32
230_S334_N1.8340.31
48_N83_T1.8230.31
74_I78_I1.7980.31
74_I236_V1.7960.30
601_M648_G1.7910.30
25_I84_W1.7760.30
144_L180_Q1.7760.30
154_A367_I1.7690.30
126_I601_M1.7570.29
21_N138_S1.7430.29
90_Q533_Y1.7400.29
339_G342_G1.7130.28
133_T248_A1.7130.28
90_Q139_M1.7090.28
69_L182_F1.7060.28
214_L443_H1.6980.28
34_Y424_L1.6980.28
246_E602_G1.6940.28
135_N259_G1.6910.28
601_M644_I1.6770.27
223_I367_I1.6670.27
599_M611_L1.6620.27
135_N251_Y1.6570.27
141_V203_K1.6550.27
16_A170_I1.6430.27
325_P335_G1.6320.26
421_Q541_E1.6250.26
334_N496_L1.6150.26
72_Q220_S1.6140.26
195_A227_S1.6130.26
330_N333_G1.5970.26
370_M526_W1.5930.25
412_F416_A1.5850.25
493_G659_S1.5840.25
61_T194_I1.5750.25
107_P537_S1.5730.25
237_G608_D1.5650.25
550_A636_G1.5590.25
45_S390_R1.5320.24
40_K56_P1.5260.24
52_A214_L1.5220.24
72_Q90_Q1.5200.24
584_T611_L1.5060.23
37_A599_M1.5040.23
229_S538_V1.4990.23
237_G257_L1.4950.23
72_Q424_L1.4940.23
281_D324_T1.4940.23
372_P433_A1.4910.23
262_T605_N1.4890.23
180_Q426_M1.4870.23
247_L357_R1.4870.23
56_P522_T1.4840.23
142_F530_P1.4840.23
371_L644_I1.4800.23
586_T631_S1.4790.23
56_P594_E1.4770.23
71_I625_V1.4750.23
133_T259_G1.4710.23
115_R590_Y1.4690.23
123_L513_I1.4650.23
332_P375_L1.4640.23
141_V425_I1.4610.23
72_Q217_L1.4600.22
534_G589_P1.4570.22
383_I565_L1.4560.22
30_T443_H1.4520.22
25_I590_Y1.4480.22
30_T595_N1.4430.22
183_M597_S1.4420.22
60_V73_T1.4330.22
365_G616_L1.4320.22
126_I532_L1.4300.22
409_V430_P1.4290.22
525_Y536_N1.4250.22
351_G418_F1.4210.22
25_I360_Q1.4190.22
325_P459_A1.4190.22
61_T236_V1.4190.22
105_V548_G1.4130.22
427_L635_S1.4120.21
226_D238_S1.4070.21
16_A119_L1.4040.21
46_F73_T1.4010.21
194_I386_Y1.3940.21
184_V244_V1.3920.21
472_L610_I1.3880.21
143_T531_L1.3880.21
526_W529_T1.3870.21
367_I599_M1.3840.21
21_N91_A1.3820.21
56_P584_T1.3780.21
254_T258_F1.3740.21
96_G530_P1.3710.21
259_G416_A1.3700.21
163_L230_S1.3630.20
493_G571_H1.3620.20
133_T251_Y1.3620.20
184_V442_M1.3620.20
87_I533_Y1.3600.20
36_L86_V1.3560.20
164_L338_G1.3560.20
48_N58_G1.3540.20
157_Q180_Q1.3510.20
37_A56_P1.3500.20
106_K238_S1.3490.20
25_I470_Y1.3470.20
611_L619_L1.3470.20
321_G501_L1.3450.20
126_I443_H1.3420.20
260_Q443_H1.3370.20
54_F599_M1.3360.20
368_S526_W1.3340.20
22_T619_L1.3270.20
517_C657_S1.3260.20
72_Q93_A1.3240.20
37_A584_T1.3240.20
69_L136_I1.3210.20
193_L461_V1.3190.20
599_M602_G1.3160.20
95_V594_E1.3140.20
213_L329_G1.3110.19
197_R238_S1.3050.19
465_A468_Q1.3050.19
302_G327_T1.3040.19
73_T479_I1.3020.19
216_G549_S1.2930.19
307_A489_L1.2920.19
184_V342_G1.2900.19
255_E377_G1.2900.19
17_A353_P1.2840.19
241_T580_A1.2820.19
651_I658_G1.2780.19
101_L410_A1.2740.19
330_N459_A1.2720.19
237_G530_P1.2710.19
107_P161_V1.2680.19
27_Q104_M1.2660.19
129_A408_P1.2660.19
613_V617_K1.2650.19
183_M237_G1.2630.19
173_A495_T1.2620.19
266_K651_I1.2560.18
526_W567_Y1.2540.18
96_G360_Q1.2530.18
36_L346_N1.2520.18
377_G441_T1.2510.18
71_I143_T1.2480.18
224_A297_G1.2470.18
425_I592_I1.2450.18
563_G642_S1.2450.18
74_I77_L1.2410.18
240_Q600_A1.2370.18
45_S116_I1.2370.18
45_S487_L1.2320.18
115_R360_Q1.2320.18
199_S527_S1.2310.18
127_A425_I1.2310.18
146_L468_Q1.2310.18
467_F471_I1.2280.18
57_S430_P1.2280.18
17_A21_N1.2260.18
34_Y53_S1.2240.18
17_A118_A1.2210.18
147_G576_E1.2190.18
584_T599_M1.2110.18
285_A309_Q1.2110.18
268_D646_K1.2080.18
530_P534_G1.2040.17
135_N243_S1.2020.17
383_I490_L1.1990.17
264_L554_N1.1980.17
36_L135_N1.1970.17
56_P599_M1.1960.17
115_R170_I1.1920.17
582_L640_L1.1910.17
454_S460_A1.1870.17
251_Y580_A1.1850.17
316_G325_P1.1850.17
135_N138_S1.1830.17
214_L219_L1.1780.17
46_F431_I1.1760.17
40_K163_L1.1740.17
140_L253_G1.1710.17
351_G368_S1.1680.17
162_W240_Q1.1670.17
435_S556_F1.1610.17
82_H142_F1.1580.17
447_K509_K1.1570.17
114_A567_Y1.1550.17
28_D166_A1.1540.17
599_M606_G1.1500.17
45_S303_N1.1490.17
95_V612_T1.1480.17
54_F59_F1.1430.16
102_Y144_L1.1420.16
258_F605_N1.1420.16
60_V528_A1.1410.16
25_I96_G1.1390.16
376_I651_I1.1370.16
165_T210_S1.1350.16
59_F611_L1.1330.16
358_L363_L1.1300.16
51_Y219_L1.1290.16
59_F600_A1.1270.16
43_T403_A1.1260.16
36_L248_A1.1260.16
351_G526_W1.1260.16
72_Q213_L1.1240.16
370_M489_L1.1240.16
653_S658_G1.1220.16
69_L533_Y1.1210.16
32_N247_L1.1200.16
32_N357_R1.1200.16
435_S652_T1.1170.16
196_S407_V1.1120.16
216_G528_A1.1110.16
50_F93_A1.1110.16
40_K44_Q1.1090.16
351_G628_F1.1080.16
594_E597_S1.1070.16
210_S451_D1.1070.16
127_A579_F1.1060.16
85_S248_A1.1030.16
412_F418_F1.1030.16
8_A45_S1.1010.16
179_M520_L1.1000.16
38_A167_F1.0980.16
376_I664_N1.0960.16
74_I619_L1.0940.16
217_L220_S1.0940.16
576_E622_E1.0940.16
50_F72_Q1.0920.16
652_T656_Y1.0880.16
77_L616_L1.0870.16
62_V135_N1.0860.15
127_A166_A1.0840.15
222_A604_F1.0830.15
626_K644_I1.0820.15
17_A182_F1.0780.15
378_L403_A1.0780.15
87_I90_Q1.0750.15
115_R167_F1.0750.15
25_I530_P1.0730.15
243_S251_Y1.0710.15
145_L529_T1.0710.15
467_F626_K1.0710.15
231_S650_E1.0690.15
37_A367_I1.0650.15
107_P167_F1.0640.15
258_F607_T1.0620.15
7_D248_A1.0570.15
231_S615_E1.0570.15
208_L489_L1.0570.15
170_I203_K1.0560.15
328_G647_N1.0530.15
10_L38_A1.0510.15
33_Q584_T1.0500.15
115_R398_E1.0490.15
44_Q518_V1.0490.15
123_L657_S1.0460.15
347_M350_T1.0440.15
175_N226_D1.0430.15
373_F565_L1.0430.15
121_M203_K1.0370.15
84_W90_Q1.0370.15
492_L629_L1.0340.15
269_M487_L1.0330.15
132_R422_Y1.0310.15
44_Q480_G1.0300.15
123_L439_W1.0300.15
24_H219_L1.0300.15
356_L411_G1.0250.15
34_Y358_L1.0190.14
95_V159_K1.0190.14
22_T91_A1.0160.14
555_M588_A1.0160.14
92_L371_L1.0150.14
95_V163_L1.0150.14
56_P59_F1.0150.14
556_F559_E1.0130.14
236_V476_T1.0080.14
497_A625_V1.0070.14
477_S570_K1.0050.14
69_L87_I1.0040.14
246_E600_A1.0040.14
65_P247_L1.0010.14
65_P357_R1.0010.14
52_A625_V0.9980.14
310_P507_F0.9960.14
597_S638_S0.9880.14
370_M514_I0.9880.14
163_L196_S0.9880.14
208_L311_P0.9880.14
415_I418_F0.9880.14
463_I538_V0.9870.14
237_G656_Y0.9860.14
284_Q312_N0.9860.14
33_Q391_G0.9850.14
315_T327_T0.9840.14
599_M610_I0.9810.14
146_L588_A0.9780.14
321_G335_G0.9740.14
407_V532_L0.9730.14
229_S262_T0.9710.14
7_D36_L0.9690.14
50_F347_M0.9690.14
275_G279_N0.9680.14
56_P611_L0.9680.14
25_I115_R0.9630.14
92_L351_G0.9590.14
598_V643_W0.9590.14
37_A611_L0.9580.14
169_L468_Q0.9580.14
109_F145_L0.9570.14
527_S656_Y0.9560.14
243_S248_A0.9550.14
17_A128_V0.9550.14
363_L408_P0.9500.13
238_S244_V0.9500.13
424_L536_N0.9490.13
225_V436_G0.9470.13
378_L527_S0.9440.13
284_Q321_G0.9430.13
40_K582_L0.9420.13
417_G572_N0.9420.13
38_A418_F0.9410.13
211_L349_G0.9410.13
267_G551_N0.9380.13
201_K561_D0.9350.13
275_G618_K0.9350.13
231_S303_N0.9300.13
43_T73_T0.9280.13
141_V153_R0.9270.13
169_L601_M0.9260.13
377_G546_L0.9260.13
418_F628_F0.9260.13
304_H342_G0.9260.13
24_H27_Q0.9250.13
321_G331_G0.9250.13
346_N368_S0.9250.13
461_V481_S0.9250.13
48_N131_S0.9220.13
495_T503_R0.9220.13
601_M640_L0.9210.13
204_I645_K0.9210.13
51_Y453_S0.9200.13
609_P658_G0.9180.13
482_V538_V0.9180.13
54_F602_G0.9170.13
133_T416_A0.9150.13
211_L421_Q0.9150.13
370_M468_Q0.9140.13
14_L640_L0.9130.13
567_Y626_K0.9110.13
47_H401_F0.9100.13
116_I419_F0.9100.13
230_S313_G0.9100.13
182_F455_Y0.9080.13
175_N247_L0.9080.13
175_N357_R0.9080.13
90_Q218_S0.9050.13
25_I156_K0.9050.13
376_I659_S0.9040.13
616_L628_F0.9040.13
130_V573_T0.9040.13
164_L235_Y0.9020.13
255_E258_F0.9020.13
144_L183_M0.9010.13
163_L465_A0.9010.13
584_T594_E0.9010.13
196_S659_S0.9000.13
117_A573_T0.8990.13
228_A308_P0.8980.13
127_A590_Y0.8980.13
529_T578_L0.8970.13
85_S183_M0.8970.13
446_Y458_P0.8960.13
210_S573_T0.8950.13
169_L337_P0.8940.13
477_S649_K0.8940.13
229_S345_V0.8940.13
73_T114_A0.8940.13
106_K403_A0.8920.13
569_R621_K0.8910.13
618_K639_E0.8890.13
228_A581_T0.8890.13
68_V135_N0.8880.13
121_M583_T0.8880.13
156_K210_S0.8870.13
482_V486_V0.8870.13
192_Y214_L0.8850.13
211_L568_L0.8840.13
300_S376_I0.8840.13
86_V191_F0.8830.13
43_T607_T0.8830.13
568_L627_Y0.8810.12
460_A493_G0.8810.12
26_W142_F0.8800.12
30_T69_L0.8800.12
82_H127_A0.8780.12
46_F495_T0.8770.12
120_V370_M0.8770.12
330_N444_R0.8760.12
278_Q440_Y0.8730.12
36_L68_V0.8690.12
33_Q196_S0.8690.12
217_L268_D0.8680.12
300_S303_N0.8670.12
115_R248_A0.8660.12
126_I535_G0.8660.12
210_S224_A0.8640.12
115_R579_F0.8630.12
71_I139_M0.8620.12
163_L202_K0.8620.12
51_Y621_K0.8620.12
25_I537_S0.8610.12
280_Q659_S0.8590.12
117_A444_R0.8580.12
360_Q579_F0.8570.12
227_S236_V0.8570.12
591_I595_N0.8560.12
50_F71_I0.8530.12
95_V442_M0.8520.12
199_S340_G0.8520.12
71_I90_Q0.8520.12
126_I455_Y0.8520.12
100_L168_A0.8510.12
36_L416_A0.8480.12
281_D637_N0.8480.12
464_T537_S0.8460.12
166_A579_F0.8460.12
85_S576_E0.8460.12
577_Y619_L0.8450.12
48_N60_V0.8440.12
87_I468_Q0.8420.12
330_N336_G0.8420.12
468_Q607_T0.8410.12
364_S479_I0.8410.12
584_T600_A0.8370.12
167_F180_Q0.8360.12
90_Q122_A0.8350.12
131_S595_N0.8350.12
50_F220_S0.8340.12
565_L629_L0.8340.12
152_L437_I0.8330.12
430_P490_L0.8330.12
87_I529_T0.8320.12
134_N247_L0.8320.12
134_N357_R0.8320.12
475_Y526_W0.8320.12
107_P115_R0.8310.12
151_L452_W0.8250.12
164_L301_F0.8240.12
218_S537_S0.8230.12
90_Q143_T0.8220.12
36_L583_T0.8220.12
600_A606_G0.8210.12
462_L494_I0.8210.12
91_A122_A0.8200.12
147_G310_P0.8200.12
51_Y240_Q0.8190.12
379_L492_L0.8190.12
156_K590_Y0.8150.12
236_V446_Y0.8140.12
162_W251_Y0.8140.12
209_L212_V0.8120.12
12_L632_E0.8120.12
26_W579_F0.8120.12
168_A198_V0.8110.12
491_G625_V0.8100.12
85_S167_F0.8100.12
154_A204_I0.8100.12
337_P427_L0.8100.12
164_L583_T0.8090.12
317_A442_M0.8080.12
465_A589_P0.8080.12
184_V650_E0.8050.12
62_V259_G0.8050.12
68_V133_T0.8040.11
93_A139_M0.8020.11
30_T36_L0.8000.11
251_Y544_P0.7990.11
321_G466_V0.7990.11
36_L107_P0.7970.11
407_V576_E0.7960.11
193_L349_G0.7950.11
165_T215_T0.7940.11
83_T109_F0.7930.11
249_F259_G0.7930.11
378_L644_I0.7900.11
191_F544_P0.7880.11
321_G324_T0.7880.11
304_H309_Q0.7870.11
65_P540_P0.7850.11
407_V464_T0.7850.11
15_L653_S0.7840.11
160_L163_L0.7840.11
59_F622_E0.7840.11
28_D90_Q0.7830.11
562_S639_E0.7830.11
304_H318_L0.7810.11
409_V425_I0.7810.11
328_G338_G0.7800.11
484_M489_L0.7760.11
83_T141_V0.7760.11
106_K401_F0.7760.11
107_P248_A0.7760.11
163_L623_G0.7760.11
248_A251_Y0.7750.11
93_A424_L0.7730.11
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335_G444_R0.6250.09
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200_L346_N0.6190.09
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367_I584_T0.6170.09
459_A512_T0.6170.09
548_G601_M0.6170.09
60_V136_I0.6150.09
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491_G626_K0.6150.09
117_A604_F0.6150.09
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25_I656_Y0.6110.09
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332_P646_K0.6110.09
39_V472_L0.6100.09
364_S467_F0.6100.09
218_S424_L0.6090.09
62_V544_P0.6090.09
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265_A610_I0.6080.09
184_V459_A0.6080.09
301_F331_G0.6080.09
618_K635_S0.6080.09
217_L317_A0.6080.09
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549_S638_S0.6030.09
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297_G302_G0.5980.09
99_F370_M0.5960.09
108_T385_W0.5960.09
521_L629_L0.5960.09
505_H516_L0.5950.09
238_S347_M0.5950.09
273_G459_A0.5940.09
180_Q539_L0.5930.09
92_L132_R0.5920.09
90_Q406_L0.5920.09
129_A175_N0.5920.09
535_G541_E0.5900.09
602_G611_L0.5900.09
261_T521_L0.5900.09
137_D177_K0.5900.09
594_E611_L0.5880.09
95_V407_V0.5880.09
122_A436_G0.5880.09
605_N652_T0.5870.09
176_M538_V0.5870.09
51_Y595_N0.5870.09
401_F442_M0.5860.09
421_Q616_L0.5860.09
154_A602_G0.5850.09
203_K622_E0.5830.09
170_I355_P0.5820.09
594_E622_E0.5810.09
87_I141_V0.5810.09
359_F598_V0.5800.09
23_Y471_I0.5790.09
365_G565_L0.5790.09
78_I460_A0.5780.09
612_T618_K0.5770.09
385_W471_I0.5770.09
11_I654_D0.5770.09
34_Y47_H0.5770.09
38_A120_V0.5770.09
285_A516_L0.5770.09
266_K329_G0.5760.09
500_M507_F0.5760.09
50_F122_A0.5740.09
59_F238_S0.5730.09
185_L510_L0.5730.09
176_M531_L0.5720.09
54_F600_A0.5710.09
47_H347_M0.5690.09
146_L584_T0.5690.09
442_M649_K0.5690.09
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303_N329_G0.5650.09
156_K170_I0.5650.09
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244_V516_L0.5610.09
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28_D44_Q0.5600.09
142_F581_T0.5600.09
561_D576_E0.5600.09
324_T489_L0.5590.09
140_L429_P0.5590.09
253_G429_P0.5590.09
219_L642_S0.5590.09
233_R242_N0.5590.09
524_V573_T0.5580.09
75_F451_D0.5570.09
222_A244_V0.5570.09
28_D67_V0.5570.09
236_V474_A0.5570.09
96_G581_T0.5560.09
60_V480_G0.5560.09
121_M214_L0.5550.09
96_G529_T0.5540.09
48_N331_G0.5530.09
214_L499_L0.5520.09
208_L639_E0.5520.09
208_L517_C0.5510.09
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251_Y412_F0.5500.09
588_A626_K0.5490.09
81_V86_V0.5490.09
368_S544_P0.5490.09
26_W360_Q0.5470.09
232_S497_A0.5470.09
241_T248_A0.5470.09
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60_V108_T0.5440.09
332_P662_S0.5440.09
27_Q382_I0.5430.09
185_L548_G0.5430.09
32_N175_N0.5420.09
462_L571_H0.5420.09
310_P615_E0.5410.09
172_L205_G0.5410.09
232_S586_T0.5400.09
378_L444_R0.5400.09
483_W525_Y0.5390.09
135_N348_F0.5390.09
21_N424_L0.5380.09
36_L191_F0.5380.09
619_L622_E0.5380.09
229_S240_Q0.5380.09
453_S517_C0.5370.09
368_S412_F0.5360.09
583_T635_S0.5360.09
47_H518_V0.5360.09
388_D547_K0.5350.09
202_K320_G0.5320.09
549_S634_N0.5310.08
631_S636_G0.5310.08
59_F522_T0.5310.08
122_A268_D0.5310.08
611_L624_K0.5300.08
14_L84_W0.5300.08
368_S418_F0.5300.08
488_G528_A0.5300.08
412_F567_Y0.5290.08
170_I594_E0.5290.08
446_Y514_I0.5280.08
117_A511_L0.5270.08
412_F525_Y0.5270.08
82_H475_Y0.5250.08
228_A232_S0.5250.08
248_A412_F0.5250.08
78_I331_G0.5250.08
30_T430_P0.5250.08
236_V460_A0.5230.08
436_G604_F0.5230.08
215_T571_H0.5220.08
284_Q344_S0.5220.08
345_V659_S0.5200.08
167_F248_A0.5190.08
162_W599_M0.5190.08
17_A156_K0.5180.08
501_L596_E0.5180.08
93_A222_A0.5180.08
573_T577_Y0.5170.08
75_F393_A0.5160.08
558_S584_T0.5160.08
139_M232_S0.5130.08
73_T128_V0.5120.08
189_V421_Q0.5100.08
66_P142_F0.5100.08
202_K516_L0.5080.08
60_V118_A0.5070.08
85_S179_M0.5060.08
134_N259_G0.5050.08
52_A580_A0.5050.08
43_T69_L0.5050.08
578_L638_S0.5050.08
84_W336_G0.5050.08
106_K114_A0.5040.08
520_L624_K0.5030.08
212_V282_N0.5020.08
194_I645_K0.5010.08
7_D107_P0.5010.08
300_S308_P0.5010.08
579_F592_I0.5010.08
184_V329_G0.5000.08
322_G499_L0.5000.08
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3wajA 1 0.7182 100 0.904 Contact Map
3rceA 1 0.7182 99.9 0.921 Contact Map
4maaA 1 0.1869 41.2 0.988 Contact Map
4nv5A 1 0.3504 30.8 0.989 Contact Map
1z4hA 1 0.0934 22.6 0.989 Contact Map
1y6uA 1 0.0569 21.4 0.99 Contact Map
4j2nA 4 0.0788 18.6 0.99 Contact Map
2e18A 2 0.1766 17.4 0.99 Contact Map
2rddB 1 0.054 16.7 0.99 Contact Map
2z73A 2 0.2818 15.6 0.99 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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