RESB - BACSU - GREMLIN Contacts

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RESB - Cytochrome c biogenesis protein ResB

UniProt:	P35161	Sequences: MKQVKCECGHINPVGTVLCESCGRALQETQPPLADMRYDGSARRSQTYNKTIIDKIWNFFSSVKVGIWLIVITLAASAFGTIFPQEAYLPPGAQADTYYKEQYGTFGQLYYLLGFHHLYGSWWYLLLIASIGISLVICSLDRVIPLYRALKNQGVRRSPAFLRRQRLFSETVTVLNGESKEKIVTLLKKKHYRIREKEGSILAEKGRFSRWGPYVNHIGLIIFLIGAMLRFVPGMYVDETLWVREGETAAIPGTDGKYYLKNNQFSVETYNSKTEKKVFADAIDRVGDGRVAKNFQTDAVLYKREGKIVYGEKPKLEKVTEEDIRVNQPLRFDSFSVYQVDYKENQLDQMVFQLIDKKTKKSFGSLKINLLDPDSVYDLGNGYKVEIASYLPDFYFNQDGEPSTKTKIPNNPAFVFNIITPDKPKGEKSFVAIQETIEGSGNNKYKLKFDHVETKNITGLTVRKDLTLWVLAVGGAIFMIGVIQGMYWQHRRIWLHSQDGAVMVAGHTNKNWFGLKKDLAFILADSGLTEPVDQKELIKTQK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	542 (460)
Sequences:	1297 (909)
Seq/√Len:	42.4

BACSU - RESB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
325_R	328_Q	5.054	1.00
222_I	474_G	5.049	1.00
279_F	300_V	4.705	1.00
100_K	107_G	4.015	1.00
110_Y	115_F	3.894	1.00
165_Q	505_A	3.870	1.00
183_I	495_L	3.745	1.00
98_Y	102_Q	3.612	1.00
114_G	122_W	3.570	1.00
212_G	481_G	3.374	1.00
298_D	323_D	3.374	1.00
300_V	321_E	3.193	1.00
139_S	221_I	3.093	1.00
69_L	131_I	3.032	1.00
226_G	474_G	3.027	1.00
184_V	196_E	2.981	1.00
219_G	477_I	2.970	1.00
331_R	336_S	2.947	1.00
348_D	414_F	2.934	1.00
305_E	317_E	2.875	1.00
109_L	112_L	2.839	1.00
340_V	459_G	2.836	1.00
299_A	324_I	2.772	1.00
77_S	124_Y	2.771	1.00
73_T	131_I	2.710	1.00
279_F	321_E	2.631	1.00
318_K	321_E	2.540	1.00
226_G	470_V	2.527	1.00
294_N	325_R	2.513	1.00
476_A	480_I	2.496	1.00
170_E	503_M	2.463	1.00
296_Q	325_R	2.459	1.00
194_I	201_I	2.437	1.00
181_E	185_T	2.377	1.00
298_D	321_E	2.340	1.00
322_E	328_Q	2.329	1.00
351_V	450_D	2.327	1.00
132_G	224_L	2.265	1.00
469_W	473_V	2.263	1.00
99_Y	465_D	2.219	1.00
136_V	221_I	2.205	1.00
132_G	220_L	2.185	1.00
76_A	123_W	2.175	1.00
324_I	330_L	2.158	1.00
441_G	444_K	2.127	0.99
285_R	456_N	2.109	0.99
296_Q	323_D	2.108	0.99
105_T	109_L	2.104	0.99
135_L	138_C	2.067	0.99
139_S	218_I	2.038	0.99
114_G	121_S	2.034	0.99
277_K	300_V	1.954	0.99
84_P	87_A	1.944	0.99
83_F	106_F	1.934	0.99
276_K	337_V	1.905	0.99
196_E	199_G	1.903	0.99
181_E	196_E	1.896	0.99
282_A	298_D	1.881	0.99
349_Q	450_D	1.877	0.99
363_F	374_D	1.872	0.99
138_C	162_L	1.851	0.98
278_V	460_L	1.831	0.98
334_S	466_L	1.828	0.98
506_G	515_L	1.772	0.98
226_G	467_T	1.771	0.98
409_P	452_V	1.771	0.98
86_E	117_H	1.750	0.98
226_G	471_L	1.733	0.98
66_G	138_C	1.729	0.98
245_E	455_K	1.714	0.97
393_D	406_T	1.691	0.97
180_K	184_V	1.691	0.97
281_D	285_R	1.684	0.97
278_V	458_T	1.681	0.97
263_N	266_S	1.666	0.97
234_G	465_D	1.665	0.97
301_L	330_L	1.650	0.97
162_L	206_G	1.642	0.97
299_A	330_L	1.635	0.97
303_K	333_D	1.624	0.96
491_R	518_D	1.595	0.96
187_L	203_A	1.590	0.96
117_H	120_G	1.586	0.96
420_T	442_N	1.585	0.96
177_G	181_E	1.581	0.96
148_R	189_K	1.570	0.96
324_I	460_L	1.548	0.95
221_I	527_G	1.548	0.95
104_G	108_Q	1.529	0.95
165_Q	205_K	1.528	0.95
219_G	481_G	1.524	0.95
262_N	265_F	1.522	0.95
99_Y	110_Y	1.516	0.95
114_G	117_H	1.508	0.95
100_K	108_Q	1.506	0.95
115_F	118_L	1.477	0.94
178_E	182_K	1.475	0.94
351_V	446_K	1.453	0.93
180_K	495_L	1.444	0.93
172_V	501_A	1.430	0.93
178_E	181_E	1.427	0.93
286_V	289_G	1.421	0.93
201_I	495_L	1.408	0.92
434_Q	437_I	1.407	0.92
342_Y	456_N	1.395	0.92
90_P	460_L	1.394	0.92
245_E	278_V	1.388	0.92
277_K	302_Y	1.386	0.92
351_V	367_K	1.373	0.91
143_V	218_I	1.373	0.91
136_V	140_L	1.365	0.91
429_S	434_Q	1.358	0.91
287_G	410_N	1.349	0.91
106_F	110_Y	1.343	0.90
108_Q	112_L	1.331	0.90
63_V	141_D	1.330	0.90
126_L	225_I	1.329	0.90
295_F	325_R	1.327	0.90
99_Y	107_G	1.321	0.90
343_K	457_I	1.313	0.89
280_A	298_D	1.312	0.89
221_I	225_I	1.310	0.89
261_K	265_F	1.308	0.89
260_L	263_N	1.305	0.89
338_Y	465_D	1.296	0.89
400_G	411_N	1.294	0.89
234_G	483_I	1.289	0.88
397_N	401_E	1.277	0.88
404_T	412_P	1.272	0.88
52_I	56_I	1.270	0.88
99_Y	338_Y	1.268	0.88
281_D	494_W	1.266	0.88
263_N	300_V	1.265	0.88
265_F	268_E	1.260	0.87
286_V	293_K	1.253	0.87
96_D	104_G	1.250	0.87
472_A	476_A	1.248	0.87
366_L	447_L	1.247	0.87
420_T	423_K	1.227	0.86
392_P	395_Y	1.226	0.86
390_Y	393_D	1.224	0.86
226_G	459_G	1.221	0.86
524_A	528_L	1.219	0.85
185_T	473_V	1.219	0.85
265_F	494_W	1.218	0.85
276_K	460_L	1.212	0.85
181_E	525_D	1.211	0.85
219_G	467_T	1.210	0.85
238_D	461_T	1.210	0.85
133_I	442_N	1.207	0.85
395_Y	413_A	1.206	0.85
69_L	130_S	1.202	0.85
175_L	182_K	1.200	0.85
172_V	218_I	1.195	0.84
63_V	70_I	1.193	0.84
244_R	247_E	1.190	0.84
134_S	213_P	1.184	0.84
511_N	514_G	1.172	0.83
143_V	147_Y	1.169	0.83
404_T	407_K	1.169	0.83
279_F	282_A	1.166	0.83
437_I	447_L	1.164	0.83
54_D	127_L	1.164	0.83
109_L	221_I	1.163	0.83
472_A	475_G	1.151	0.82
137_I	210_R	1.149	0.82
278_V	286_V	1.149	0.82
483_I	487_Y	1.148	0.82
181_E	198_E	1.146	0.82
243_V	246_G	1.144	0.82
188_K	525_D	1.137	0.81
441_G	445_Y	1.129	0.81
219_G	223_F	1.129	0.81
341_D	459_G	1.128	0.81
295_F	411_N	1.127	0.81
210_R	213_P	1.121	0.80
131_I	138_C	1.119	0.80
147_Y	151_K	1.117	0.80
51_T	55_K	1.115	0.80
243_V	286_V	1.115	0.80
86_E	111_Y	1.114	0.80
70_I	123_W	1.113	0.80
406_T	410_N	1.112	0.80
230_R	465_D	1.111	0.80
284_D	524_A	1.109	0.80
243_V	341_D	1.103	0.79
182_K	186_L	1.091	0.78
139_S	214_Y	1.090	0.78
460_L	465_D	1.088	0.78
126_L	500_G	1.086	0.78
105_T	108_Q	1.083	0.78
230_R	466_L	1.075	0.77
94_Q	97_T	1.069	0.77
170_E	501_A	1.068	0.77
53_I	225_I	1.065	0.77
436_T	448_K	1.061	0.76
435_E	449_F	1.060	0.76
67_I	183_I	1.057	0.76
184_V	188_K	1.055	0.76
462_V	468_L	1.054	0.76
473_V	477_I	1.054	0.76
474_G	487_Y	1.052	0.76
363_F	366_L	1.051	0.76
55_K	58_N	1.050	0.76
101_E	425_K	1.046	0.75
465_D	508_T	1.044	0.75
175_L	179_S	1.041	0.75
508_T	512_W	1.023	0.74
138_C	218_I	1.021	0.74
226_G	234_G	1.019	0.73
133_I	150_L	1.008	0.73
404_T	411_N	1.007	0.73
501_A	529_T	1.007	0.73
125_L	129_A	1.007	0.73
348_D	447_L	1.004	0.72
222_I	477_I	1.002	0.72
324_I	380_G	1.000	0.72
146_L	149_A	0.995	0.72
234_G	467_T	0.993	0.71
146_L	211_W	0.992	0.71
146_L	150_L	0.990	0.71
136_V	449_F	0.987	0.71
136_V	161_F	0.986	0.71
48_Y	52_I	0.986	0.71
143_V	234_G	0.984	0.71
350_M	449_F	0.982	0.71
226_G	338_Y	0.979	0.70
188_K	349_Q	0.977	0.70
153_Q	195_R	0.970	0.70
260_L	265_F	0.967	0.69
521_F	525_D	0.967	0.69
57_W	61_S	0.966	0.69
75_A	232_V	0.964	0.69
119_Y	499_D	0.962	0.69
285_R	370_L	0.961	0.69
231_F	514_G	0.960	0.69
349_Q	448_K	0.958	0.69
260_L	264_Q	0.956	0.69
205_K	474_G	0.955	0.68
222_I	226_G	0.952	0.68
222_I	473_V	0.948	0.68
110_Y	484_Q	0.947	0.68
292_A	296_Q	0.946	0.68
113_L	179_S	0.946	0.68
204_E	207_R	0.942	0.67
111_Y	116_H	0.940	0.67
169_S	520_A	0.937	0.67
406_T	409_P	0.936	0.67
505_A	518_D	0.935	0.67
147_Y	150_L	0.934	0.67
119_Y	125_L	0.934	0.67
303_K	332_F	0.931	0.66
235_M	461_T	0.930	0.66
303_K	317_E	0.929	0.66
180_K	196_E	0.928	0.66
246_G	460_L	0.927	0.66
350_M	370_L	0.927	0.66
440_S	443_N	0.923	0.66
63_V	213_P	0.922	0.66
168_F	503_M	0.922	0.66
392_P	415_V	0.918	0.65
386_E	417_N	0.916	0.65
183_I	522_I	0.915	0.65
90_P	97_T	0.913	0.65
87_A	98_Y	0.909	0.65
177_G	180_K	0.901	0.64
205_K	518_D	0.900	0.64
337_V	460_L	0.898	0.64
57_W	62_S	0.896	0.63
407_K	412_P	0.896	0.63
76_A	412_P	0.894	0.63
302_Y	306_G	0.893	0.63
48_Y	51_T	0.892	0.63
180_K	201_I	0.892	0.63
61_S	137_I	0.892	0.63
254_T	467_T	0.885	0.63
504_V	519_L	0.881	0.62
138_C	143_V	0.880	0.62
408_I	412_P	0.879	0.62
282_A	285_R	0.878	0.62
474_G	510_K	0.878	0.62
121_S	220_L	0.874	0.62
336_S	471_L	0.874	0.62
195_R	416_F	0.867	0.61
296_Q	464_K	0.866	0.61
132_G	194_I	0.865	0.61
213_P	216_N	0.864	0.61
284_D	293_K	0.861	0.60
134_S	492_R	0.859	0.60
63_V	216_N	0.858	0.60
245_E	253_G	0.857	0.60
133_I	225_I	0.848	0.59
404_T	413_A	0.847	0.59
284_D	294_N	0.846	0.59
295_F	495_L	0.846	0.59
435_E	522_I	0.844	0.59
510_K	519_L	0.839	0.58
301_L	320_T	0.839	0.58
99_Y	117_H	0.839	0.58
183_I	497_S	0.836	0.58
393_D	410_N	0.832	0.58
113_L	504_V	0.831	0.58
201_I	208_F	0.830	0.58
343_K	459_G	0.830	0.58
174_V	476_A	0.829	0.57
187_L	493_I	0.827	0.57
172_V	504_V	0.827	0.57
292_A	342_Y	0.822	0.57
60_F	349_Q	0.821	0.57
299_A	458_T	0.818	0.56
251_I	337_V	0.818	0.56
63_V	137_I	0.814	0.56
239_E	292_A	0.813	0.56
278_V	285_R	0.813	0.56
144_I	147_Y	0.812	0.56
99_Y	104_G	0.811	0.56
493_I	518_D	0.808	0.55
338_Y	508_T	0.804	0.55
144_I	148_R	0.803	0.55
112_L	473_V	0.803	0.55
334_S	471_L	0.802	0.55
219_G	478_F	0.800	0.55
171_T	527_G	0.799	0.55
480_I	526_S	0.797	0.54
75_A	299_A	0.795	0.54
379_L	382_G	0.791	0.54
169_S	519_L	0.791	0.54
115_F	129_A	0.791	0.54
102_Q	215_V	0.785	0.53
192_Y	205_K	0.785	0.53
408_I	456_N	0.785	0.53
173_T	176_N	0.785	0.53
385_V	418_I	0.783	0.53
215_V	484_Q	0.778	0.53
440_S	444_K	0.778	0.53
125_L	509_N	0.778	0.53
134_S	494_W	0.776	0.52
139_S	143_V	0.775	0.52
138_C	281_D	0.775	0.52
467_T	478_F	0.775	0.52
493_I	530_E	0.771	0.52
409_P	412_P	0.771	0.52
347_L	452_V	0.769	0.52
281_D	297_T	0.768	0.52
360_K	365_S	0.768	0.52
224_L	227_A	0.767	0.52
79_F	115_F	0.765	0.51
405_K	410_N	0.763	0.51
124_Y	407_K	0.762	0.51
137_I	490_H	0.761	0.51
495_L	526_S	0.760	0.51
230_R	461_T	0.759	0.51
474_G	477_I	0.757	0.51
440_S	445_Y	0.757	0.51
110_Y	474_G	0.757	0.51
159_P	206_G	0.755	0.51
248_T	277_K	0.754	0.50
493_I	528_L	0.753	0.50
113_L	323_D	0.750	0.50
330_L	394_F	0.750	0.50
445_Y	449_F	0.750	0.50
279_F	318_K	0.749	0.50
184_V	201_I	0.749	0.50
66_G	431_V	0.747	0.50
239_E	243_V	0.746	0.50
140_L	227_A	0.746	0.50
152_N	175_L	0.744	0.49
246_G	481_G	0.744	0.49
63_V	214_Y	0.744	0.49
100_K	111_Y	0.743	0.49
150_L	211_W	0.738	0.49
304_R	317_E	0.738	0.49
122_W	218_I	0.735	0.49
184_V	194_I	0.733	0.48
338_Y	473_V	0.733	0.48
367_K	387_I	0.732	0.48
82_I	237_V	0.732	0.48
103_Y	295_F	0.730	0.48
163_R	170_E	0.730	0.48
151_K	499_D	0.728	0.48
382_G	505_A	0.726	0.48
351_V	365_S	0.724	0.48
305_E	333_D	0.724	0.48
418_I	449_F	0.724	0.48
226_G	229_L	0.724	0.48
362_S	372_D	0.723	0.47
204_E	490_H	0.720	0.47
65_V	489_Q	0.720	0.47
528_L	531_P	0.719	0.47
173_T	525_D	0.718	0.47
261_K	264_Q	0.717	0.47
243_V	460_L	0.714	0.47
169_S	498_Q	0.714	0.47
68_W	72_I	0.713	0.47
213_P	509_N	0.712	0.46
154_G	407_K	0.711	0.46
169_S	523_L	0.710	0.46
100_K	106_F	0.709	0.46
205_K	377_Y	0.708	0.46
78_A	124_Y	0.708	0.46
135_L	140_L	0.707	0.46
133_I	521_F	0.705	0.46
135_L	338_Y	0.705	0.46
159_P	164_R	0.704	0.46
107_G	115_F	0.704	0.46
305_E	501_A	0.703	0.46
353_Q	380_G	0.703	0.46
282_A	296_Q	0.703	0.46
179_S	502_V	0.702	0.46
216_N	509_N	0.702	0.46
163_R	503_M	0.702	0.46
504_V	523_L	0.701	0.45
451_H	455_K	0.700	0.45
262_N	266_S	0.697	0.45
69_L	127_L	0.697	0.45
62_S	412_P	0.696	0.45
342_Y	370_L	0.695	0.45
376_V	380_G	0.695	0.45
229_L	477_I	0.695	0.45
135_L	249_A	0.695	0.45
178_E	500_G	0.695	0.45
113_L	247_E	0.693	0.45
389_S	393_D	0.693	0.45
199_G	498_Q	0.692	0.45
115_F	162_L	0.692	0.45
394_F	406_T	0.691	0.44
479_M	506_G	0.691	0.44
296_Q	462_V	0.689	0.44
149_A	165_Q	0.689	0.44
223_F	474_G	0.689	0.44
284_D	506_G	0.688	0.44
58_N	62_S	0.686	0.44
133_I	147_Y	0.686	0.44
278_V	281_D	0.686	0.44
72_I	126_L	0.684	0.44
74_L	393_D	0.683	0.44
122_W	125_L	0.682	0.44
335_F	464_K	0.680	0.43
236_Y	461_T	0.679	0.43
204_E	210_R	0.675	0.43
299_A	504_V	0.674	0.43
55_K	445_Y	0.673	0.43
49_N	56_I	0.671	0.43
128_I	132_G	0.671	0.43
406_T	506_G	0.671	0.43
140_L	462_V	0.669	0.42
109_L	223_F	0.669	0.42
332_F	337_V	0.668	0.42
51_T	499_D	0.668	0.42
290_R	471_L	0.665	0.42
406_T	411_N	0.665	0.42
519_L	525_D	0.665	0.42
94_Q	471_L	0.664	0.42
150_L	221_I	0.662	0.42
190_K	525_D	0.661	0.42
155_V	195_R	0.661	0.42
199_G	495_L	0.660	0.42
63_V	210_R	0.660	0.42
134_S	295_F	0.659	0.42
83_F	283_I	0.659	0.42
199_G	212_G	0.659	0.42
65_V	216_N	0.658	0.41
238_D	254_T	0.657	0.41
251_I	254_T	0.656	0.41
116_H	343_K	0.655	0.41
114_G	463_R	0.654	0.41
306_G	317_E	0.654	0.41
118_L	123_W	0.652	0.41
84_P	142_R	0.652	0.41
115_F	514_G	0.649	0.41
425_K	442_N	0.648	0.41
213_P	344_E	0.647	0.40
174_V	182_K	0.647	0.40
62_S	119_Y	0.646	0.40
110_Y	116_H	0.642	0.40
177_G	450_D	0.642	0.40
68_W	189_K	0.642	0.40
184_V	219_G	0.642	0.40
427_E	431_V	0.639	0.40
395_Y	474_G	0.637	0.40
209_S	213_P	0.637	0.40
132_G	150_L	0.636	0.39
224_L	281_D	0.635	0.39
250_A	519_L	0.635	0.39
353_Q	381_N	0.635	0.39
63_V	131_I	0.633	0.39
408_I	411_N	0.632	0.39
220_L	224_L	0.631	0.39
131_I	290_R	0.631	0.39
196_E	301_L	0.630	0.39
281_D	286_V	0.628	0.39
49_N	52_I	0.626	0.39
119_Y	474_G	0.626	0.39
167_L	516_K	0.625	0.38
53_I	182_K	0.625	0.38
212_G	246_G	0.624	0.38
214_Y	490_H	0.624	0.38
480_I	517_K	0.622	0.38
159_P	498_Q	0.622	0.38
126_L	372_D	0.621	0.38
99_Y	106_F	0.621	0.38
489_Q	512_W	0.619	0.38
84_P	412_P	0.619	0.38
90_P	350_M	0.618	0.38
339_Q	458_T	0.617	0.38
467_T	471_L	0.617	0.38
67_I	324_I	0.616	0.38
235_M	254_T	0.615	0.38
470_V	529_T	0.615	0.38
192_Y	487_Y	0.614	0.37
219_G	252_P	0.611	0.37
186_L	522_I	0.609	0.37
66_G	191_H	0.609	0.37
163_R	318_K	0.609	0.37
56_I	59_F	0.608	0.37
52_I	55_K	0.608	0.37
278_V	490_H	0.607	0.37
339_Q	342_Y	0.605	0.37
458_T	490_H	0.601	0.36
152_N	522_I	0.601	0.36
188_K	521_F	0.599	0.36
55_K	59_F	0.599	0.36
209_S	486_M	0.598	0.36
449_F	471_L	0.597	0.36
135_L	441_G	0.596	0.36
99_Y	196_E	0.596	0.36
167_L	505_A	0.595	0.36
401_E	404_T	0.594	0.36
119_Y	468_L	0.594	0.36
437_I	444_K	0.593	0.36
223_F	475_G	0.592	0.36
216_N	490_H	0.592	0.36
150_L	460_L	0.592	0.36
406_T	413_A	0.592	0.36
213_P	485_G	0.592	0.36
61_S	210_R	0.589	0.35
54_D	60_F	0.588	0.35
496_H	503_M	0.588	0.35
128_I	293_K	0.587	0.35
387_I	416_F	0.587	0.35
451_H	524_A	0.587	0.35
107_G	390_Y	0.586	0.35
449_F	452_V	0.586	0.35
113_L	502_V	0.586	0.35
130_S	193_R	0.583	0.35
506_G	519_L	0.583	0.35
138_C	149_A	0.582	0.35
405_K	413_A	0.582	0.35
64_K	71_V	0.581	0.35
377_Y	380_G	0.581	0.35
59_F	65_V	0.580	0.35
176_N	275_E	0.580	0.35
52_I	435_E	0.579	0.34
162_L	168_F	0.578	0.34
115_F	499_D	0.577	0.34
328_Q	337_V	0.577	0.34
387_I	418_I	0.575	0.34
295_F	406_T	0.575	0.34
324_I	390_Y	0.575	0.34
197_K	200_S	0.574	0.34
126_L	440_S	0.574	0.34
160_A	501_A	0.574	0.34
322_E	448_K	0.574	0.34
171_T	178_E	0.573	0.34
360_K	381_N	0.572	0.34
110_Y	254_T	0.572	0.34
238_D	463_R	0.572	0.34
351_V	451_H	0.572	0.34
422_D	494_W	0.572	0.34
299_A	318_K	0.571	0.34
106_F	274_T	0.570	0.34
411_N	435_E	0.570	0.34
88_Y	95_A	0.569	0.34
177_G	197_K	0.569	0.34
130_S	466_L	0.567	0.33
172_V	225_I	0.567	0.33
148_R	503_M	0.567	0.33
194_I	350_M	0.567	0.33
293_K	474_G	0.567	0.33
238_D	458_T	0.567	0.33
336_S	468_L	0.566	0.33
73_T	116_H	0.564	0.33
205_K	244_R	0.563	0.33
68_W	71_V	0.562	0.33
278_V	282_A	0.560	0.33
60_F	63_V	0.560	0.33
223_F	301_L	0.559	0.33
124_Y	471_L	0.559	0.33
219_G	238_D	0.559	0.33
171_T	182_K	0.559	0.33
450_D	488_W	0.559	0.33
180_K	246_G	0.559	0.33
149_A	470_V	0.559	0.33
317_E	470_V	0.557	0.33
149_A	514_G	0.556	0.33
191_H	278_V	0.555	0.32
292_A	448_K	0.554	0.32
209_S	485_G	0.552	0.32
101_E	435_E	0.552	0.32
53_I	302_Y	0.552	0.32
67_I	131_I	0.552	0.32
243_V	250_A	0.550	0.32
279_F	323_D	0.549	0.32
389_S	501_A	0.548	0.32
72_I	500_G	0.546	0.32
82_I	179_S	0.545	0.32
378_D	480_I	0.545	0.32
98_Y	119_Y	0.545	0.32
187_L	290_R	0.544	0.32
61_S	139_S	0.543	0.31
100_K	105_T	0.542	0.31
286_V	291_V	0.541	0.31
210_R	214_Y	0.541	0.31
516_K	520_A	0.541	0.31
183_I	462_V	0.540	0.31
103_Y	212_G	0.540	0.31
217_H	327_N	0.539	0.31
187_L	382_G	0.538	0.31
54_D	62_S	0.538	0.31
136_V	413_A	0.537	0.31
226_G	469_W	0.536	0.31
64_K	433_I	0.535	0.31
321_E	400_G	0.534	0.31
448_K	523_L	0.534	0.31
177_G	521_F	0.534	0.31
319_V	332_F	0.534	0.31
392_P	402_P	0.534	0.31
65_V	490_H	0.533	0.31
53_I	418_I	0.532	0.31
335_F	471_L	0.532	0.31
61_S	220_L	0.531	0.30
123_W	481_G	0.530	0.30
72_I	424_P	0.529	0.30
248_T	275_E	0.528	0.30
190_K	521_F	0.526	0.30
124_Y	343_K	0.526	0.30
82_I	517_K	0.526	0.30
99_Y	508_T	0.525	0.30
149_A	465_D	0.525	0.30
141_D	213_P	0.524	0.30
201_I	321_E	0.523	0.30
508_T	515_L	0.523	0.30
143_V	479_M	0.522	0.30
489_Q	506_G	0.522	0.30
119_Y	480_I	0.522	0.30
229_L	232_V	0.521	0.30
142_R	164_R	0.521	0.30
338_Y	463_R	0.520	0.30
65_V	72_I	0.520	0.30
299_A	469_W	0.518	0.29
233_P	467_T	0.517	0.29
97_T	292_A	0.516	0.29
394_F	404_T	0.516	0.29
250_A	451_H	0.516	0.29
210_R	509_N	0.516	0.29
84_P	204_E	0.515	0.29
228_M	337_V	0.515	0.29
514_G	518_D	0.515	0.29
128_I	154_G	0.514	0.29
244_R	345_N	0.513	0.29
391_L	402_P	0.513	0.29
371_L	430_F	0.513	0.29
334_S	462_V	0.512	0.29
180_K	470_V	0.512	0.29
124_Y	227_A	0.512	0.29
334_S	495_L	0.511	0.29
476_A	528_L	0.511	0.29
317_E	480_I	0.510	0.29
333_D	480_I	0.510	0.29
364_G	374_D	0.510	0.29
179_S	498_Q	0.509	0.29
54_D	57_W	0.509	0.29
385_V	432_A	0.509	0.29
429_S	433_I	0.508	0.29
100_K	104_G	0.508	0.29
416_F	447_L	0.508	0.29
489_Q	511_N	0.508	0.29
411_N	414_F	0.508	0.29
154_G	346_Q	0.508	0.29
504_V	526_S	0.507	0.29
520_A	530_E	0.507	0.29
266_S	269_T	0.507	0.29
396_F	400_G	0.506	0.29
183_I	186_L	0.505	0.28
330_L	337_V	0.505	0.28
363_F	415_V	0.503	0.28
71_V	506_G	0.503	0.28
189_K	525_D	0.501	0.28
78_A	433_I	0.501	0.28
228_M	231_F	0.500	0.28

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3wkvA	3	0.2159	90.7	0.967	Contact Map
4h33A	3	0.1568	74.2	0.973	Contact Map
4g7vS	1	0.1993	66.8	0.975	Contact Map
3j21g	1	0.0646	55.6	0.976	Contact Map
1vd4A	1	0.072	54.4	0.976	Contact Map
5aunA	1	0.083	46.6	0.978	Contact Map
1h7bA	2	0.0369	45	0.978	Contact Map
3h0gL	1	0.0756	43	0.978	Contact Map
4g80S	1	0.2048	40.3	0.978	Contact Map
4qiwP	1	0.0664	36.6	0.979	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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