SP5AF - BACSU - GREMLIN Contacts

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SP5AF - Stage V sporulation protein AF

UniProt:	P31845	Sequences: MPDHKEEKIRVYRNPAKNEEYFKNRVGMGTSYDVGVRKLTILDKEIQLYYLNGLCDTAYIIHLMRELVAINNRKEDPDELVDIVENRLLNAQVEKVKTLDETTDQVLSGLVAVIVEGAGFAFIIDVRSYPGRNPEEPDTEKVVRGARDGFVENIVVNTALLRRRIRDERLRVKMTKVGERSKTDLSICYIEDIADPDLVEIVEKEIASIDVDGLTMADKTVEEFIVNQSYNPFPLVRYTERPDVAANHVLEGHVIIIVDTSPSVIITPTTLFHHVQHAEEYRQAPSVGTFLRWVRFFGILASTLFLPIWFLFVLQPDLLPDNMKFIGLNKDTHIPIILQIFLADLGIEFLRMAAIHTPTALSTAMGLIAAVLIGQIAIEVGLFSPEVILYVSLAAIGTFTTPSYELSLANKMSRLVLMILVALFHIKGLVIGFTVLIIAMASIKSLQTPYLWPLIPFNGKALWQVLVRTAKPGAKVRPSIVHPKNRLRQPTNS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	493 (471)
Sequences:	2252 (1879)
Seq/√Len:	86.6

BACSU - SP5AF GERKA YNDD YFKQ GERBA GERAA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
173_K	203_E	7.200	1.00
245_A	255_I	7.078	1.00
420_L	432_G	5.813	1.00
179_E	210_D	4.737	1.00
194_A	199_V	4.602	1.00
111_V	126_V	4.599	1.00
177_V	206_I	4.083	1.00
375_Q	379_E	3.525	1.00
226_V	284_A	3.498	1.00
257_I	264_V	3.255	1.00
310_F	418_M	3.063	1.00
172_V	186_S	3.043	1.00
236_V	267_T	3.037	1.00
190_I	193_I	2.997	1.00
106_V	112_A	2.974	1.00
172_V	188_C	2.941	1.00
187_I	203_E	2.939	1.00
161_L	257_I	2.870	1.00
148_D	164_R	2.832	1.00
304_L	433_F	2.814	1.00
340_I	387_V	2.782	1.00
155_V	158_T	2.694	1.00
98_T	101_E	2.694	1.00
213_G	250_L	2.678	1.00
112_A	123_I	2.664	1.00
19_E	47_Q	2.625	1.00
417_L	432_G	2.624	1.00
180_R	192_D	2.612	1.00
96_V	123_I	2.517	1.00
441_A	451_L	2.482	1.00
190_I	249_V	2.413	1.00
196_P	484_K	2.413	1.00
239_T	245_A	2.387	1.00
113_V	124_I	2.367	1.00
180_R	485_N	2.363	1.00
161_L	188_C	2.360	1.00
102_T	112_A	2.327	1.00
169_R	192_D	2.294	1.00
199_V	254_V	2.272	1.00
95_K	120_F	2.231	1.00
421_V	429_L	2.212	1.00
201_I	205_E	2.209	1.00
171_R	191_E	2.168	1.00
417_L	436_L	2.164	1.00
175_T	207_A	2.160	1.00
137_P	149_G	2.158	1.00
12_Y	18_N	2.134	1.00
167_D	180_R	2.120	1.00
344_D	414_R	2.118	1.00
202_V	267_T	2.099	1.00
31_S	171_R	2.085	1.00
146_A	282_R	2.068	1.00
13_R	18_N	2.066	1.00
29_G	171_R	2.012	1.00
275_V	299_I	1.981	1.00
340_I	418_M	1.979	1.00
202_V	254_V	1.971	1.00
96_V	101_E	1.908	1.00
205_E	227_N	1.904	1.00
248_H	266_I	1.896	1.00
177_V	185_L	1.880	1.00
290_F	412_M	1.857	1.00
211_V	224_F	1.803	1.00
104_D	182_K	1.799	1.00
52_N	155_V	1.797	1.00
175_T	203_E	1.795	1.00
34_V	51_L	1.776	1.00
217_A	261_S	1.749	1.00
427_K	431_I	1.749	1.00
38_K	45_E	1.739	1.00
136_E	149_G	1.732	1.00
200_E	204_K	1.729	1.00
114_I	121_A	1.711	1.00
30_T	173_K	1.705	1.00
165_I	246_A	1.699	1.00
48_L	113_V	1.697	1.00
307_P	421_V	1.686	1.00
209_I	221_V	1.678	1.00
85_E	95_K	1.677	1.00
191_E	196_P	1.671	1.00
201_I	204_K	1.669	1.00
185_L	258_V	1.667	1.00
154_I	186_S	1.660	1.00
14_N	17_K	1.657	1.00
188_C	264_V	1.652	1.00
202_V	256_I	1.644	1.00
337_I	422_A	1.639	1.00
457_F	462_L	1.635	1.00
16_A	45_E	1.620	1.00
105_Q	123_I	1.616	1.00
20_E	24_N	1.600	1.00
281_Y	464_Q	1.588	1.00
23_K	36_V	1.585	1.00
110_L	127_R	1.571	1.00
181_S	213_G	1.560	1.00
298_G	400_T	1.552	1.00
187_I	254_V	1.551	1.00
105_Q	110_L	1.540	1.00
30_T	191_E	1.535	1.00
269_T	274_H	1.531	1.00
298_G	349_F	1.528	1.00
299_I	410_N	1.523	1.00
175_T	187_I	1.523	1.00
12_Y	17_K	1.473	0.99
212_D	477_R	1.467	0.99
218_D	258_V	1.466	0.99
97_K	120_F	1.458	0.99
102_T	121_A	1.458	0.99
176_K	184_D	1.453	0.99
196_P	200_E	1.449	0.99
174_M	184_D	1.449	0.99
92_Q	125_D	1.440	0.99
453_P	456_P	1.433	0.99
158_T	172_V	1.426	0.99
306_L	394_A	1.408	0.99
302_S	401_T	1.406	0.99
293_W	297_F	1.403	0.99
231_N	235_L	1.394	0.99
311_L	429_L	1.393	0.99
256_I	267_T	1.383	0.99
19_E	23_K	1.381	0.99
253_H	273_H	1.376	0.99
34_V	49_Y	1.370	0.99
439_A	443_I	1.354	0.99
245_A	264_V	1.325	0.99
289_T	293_W	1.325	0.99
231_N	439_A	1.321	0.99
347_I	395_A	1.316	0.99
60_I	111_V	1.315	0.99
94_E	101_E	1.311	0.99
204_K	208_S	1.304	0.99
53_G	158_T	1.304	0.99
236_V	265_I	1.304	0.99
176_K	182_K	1.302	0.99
56_D	128_S	1.299	0.99
36_V	47_Q	1.296	0.99
19_E	38_K	1.294	0.99
60_I	126_V	1.292	0.99
15_P	114_I	1.290	0.99
165_I	250_L	1.273	0.98
203_E	207_A	1.268	0.98
181_S	250_L	1.267	0.98
53_G	159_A	1.261	0.98
335_P	338_L	1.250	0.98
15_P	116_E	1.236	0.98
378_I	389_L	1.230	0.98
55_C	60_I	1.223	0.98
136_E	147_R	1.216	0.98
346_G	372_L	1.214	0.98
142_V	277_H	1.194	0.98
193_I	477_R	1.191	0.97
22_F	34_V	1.186	0.97
150_F	161_L	1.184	0.97
297_F	345_L	1.173	0.97
134_P	148_D	1.172	0.97
154_I	257_I	1.169	0.97
63_L	67_L	1.165	0.97
112_A	121_A	1.155	0.97
348_E	415_L	1.151	0.97
337_I	419_I	1.140	0.97
255_I	266_I	1.139	0.97
138_D	147_R	1.137	0.97
344_D	411_K	1.135	0.97
416_V	420_L	1.134	0.97
36_V	49_Y	1.123	0.96
148_D	163_R	1.118	0.96
37_R	93_V	1.110	0.96
477_R	485_N	1.107	0.96
174_M	186_S	1.107	0.96
169_R	191_E	1.107	0.96
440_M	451_L	1.106	0.96
194_A	254_V	1.105	0.96
79_E	82_D	1.096	0.96
235_L	284_A	1.094	0.96
198_L	254_V	1.094	0.96
304_L	417_L	1.093	0.96
344_D	391_V	1.093	0.96
266_I	273_H	1.088	0.96
110_L	125_D	1.082	0.96
58_A	62_H	1.082	0.96
158_T	188_C	1.080	0.96
274_H	406_L	1.075	0.95
175_T	206_I	1.074	0.95
108_S	166_R	1.074	0.95
334_I	338_L	1.073	0.95
245_A	266_I	1.072	0.95
204_K	207_A	1.067	0.95
255_I	264_V	1.066	0.95
17_K	20_E	1.065	0.95
141_K	359_T	1.063	0.95
81_V	89_L	1.062	0.95
328_L	385_P	1.062	0.95
41_I	46_I	1.057	0.95
53_G	155_V	1.057	0.95
54_L	159_A	1.056	0.95
201_I	227_N	1.054	0.95
15_P	47_Q	1.054	0.95
21_Y	25_R	1.053	0.95
18_N	114_I	1.047	0.95
129_Y	153_N	1.046	0.95
148_D	260_T	1.046	0.95
202_V	446_L	1.044	0.95
195_D	448_T	1.039	0.94
188_C	249_V	1.034	0.94
165_I	190_I	1.031	0.94
148_D	160_L	1.030	0.94
254_V	267_T	1.027	0.94
143_V	279_E	1.023	0.94
40_T	45_E	1.017	0.94
336_I	387_V	1.015	0.94
233_F	413_S	1.013	0.94
102_T	114_I	1.011	0.94
341_F	418_M	1.011	0.94
185_L	256_I	1.009	0.94
215_T	220_T	1.008	0.94
270_T	273_H	1.007	0.93
347_I	366_G	1.004	0.93
226_V	235_L	1.000	0.93
30_T	171_R	0.999	0.93
19_E	49_Y	0.998	0.93
135_E	149_G	0.995	0.93
418_M	422_A	0.994	0.93
354_A	362_S	0.992	0.93
47_Q	114_I	0.990	0.93
344_D	415_L	0.990	0.93
272_F	454_L	0.986	0.93
180_R	477_R	0.986	0.93
151_V	157_N	0.984	0.93
275_V	296_F	0.983	0.93
223_E	468_R	0.982	0.93
251_E	281_Y	0.982	0.93
307_P	417_L	0.982	0.93
32_Y	173_K	0.976	0.92
195_D	482_H	0.965	0.92
192_D	196_P	0.963	0.92
398_T	407_S	0.957	0.92
397_G	400_T	0.953	0.91
413_S	436_L	0.953	0.91
272_F	465_V	0.945	0.91
110_L	123_I	0.945	0.91
271_L	451_L	0.944	0.91
233_F	439_A	0.944	0.91
183_T	258_V	0.943	0.91
454_L	466_L	0.942	0.91
180_R	190_I	0.942	0.91
55_C	126_V	0.935	0.91
129_Y	163_R	0.934	0.91
292_R	464_Q	0.933	0.91
38_K	47_Q	0.930	0.90
164_R	183_T	0.926	0.90
223_E	471_K	0.920	0.90
159_A	163_R	0.914	0.90
137_P	240_E	0.911	0.90
140_E	244_V	0.911	0.90
161_L	245_A	0.906	0.89
344_D	351_R	0.905	0.89
166_R	184_D	0.902	0.89
96_V	102_T	0.901	0.89
187_I	202_V	0.899	0.89
62_H	65_R	0.899	0.89
365_M	395_A	0.899	0.89
310_F	340_I	0.892	0.89
237_R	273_H	0.892	0.89
180_R	193_I	0.886	0.88
21_Y	99_L	0.886	0.88
313_V	336_I	0.885	0.88
200_E	203_E	0.883	0.88
46_I	113_V	0.880	0.88
271_L	406_L	0.878	0.88
22_F	49_Y	0.874	0.88
13_R	119_G	0.874	0.88
233_F	440_M	0.872	0.87
28_M	34_V	0.870	0.87
49_Y	114_I	0.870	0.87
33_D	162_R	0.870	0.87
94_E	105_Q	0.870	0.87
81_V	85_E	0.869	0.87
290_F	348_E	0.866	0.87
301_A	393_L	0.863	0.87
469_T	474_A	0.862	0.87
133_N	151_V	0.860	0.87
247_N	251_E	0.859	0.87
236_V	446_L	0.858	0.87
351_R	354_A	0.858	0.87
233_F	436_L	0.856	0.86
35_G	52_N	0.855	0.86
269_T	273_H	0.855	0.86
357_T	399_F	0.855	0.86
233_F	450_Y	0.846	0.86
298_G	397_G	0.840	0.85
155_V	184_D	0.840	0.85
139_T	263_S	0.838	0.85
205_E	225_I	0.836	0.85
354_A	363_T	0.835	0.85
328_L	386_E	0.835	0.85
130_P	159_A	0.834	0.85
270_T	274_H	0.833	0.85
16_A	20_E	0.832	0.85
81_V	95_K	0.830	0.85
161_L	170_L	0.827	0.84
199_V	202_V	0.827	0.84
101_E	104_D	0.827	0.84
25_R	103_T	0.825	0.84
232_P	439_A	0.823	0.84
104_D	176_K	0.822	0.84
28_M	31_S	0.821	0.84
131_G	156_V	0.820	0.84
411_K	415_L	0.817	0.84
164_R	260_T	0.816	0.84
96_V	112_A	0.815	0.84
303_T	413_S	0.815	0.84
142_V	278_A	0.814	0.84
209_I	212_D	0.814	0.84
153_N	184_D	0.811	0.83
84_V	89_L	0.806	0.83
366_G	386_E	0.805	0.83
337_I	418_M	0.803	0.83
239_T	255_I	0.803	0.83
359_T	365_M	0.802	0.83
64_M	68_V	0.800	0.82
237_R	269_T	0.798	0.82
430_V	434_T	0.797	0.82
483_P	486_R	0.796	0.82
248_H	273_H	0.794	0.82
417_L	421_V	0.793	0.82
163_R	259_D	0.792	0.82
244_V	278_A	0.792	0.82
99_L	114_I	0.791	0.82
226_V	229_S	0.789	0.82
220_T	247_N	0.786	0.81
180_R	212_D	0.785	0.81
354_A	364_A	0.785	0.81
419_I	422_A	0.784	0.81
329_N	332_T	0.783	0.81
49_Y	106_V	0.782	0.81
132_R	152_E	0.782	0.81
153_N	156_V	0.780	0.81
139_T	361_L	0.778	0.81
195_D	483_P	0.775	0.80
364_A	370_A	0.773	0.80
289_T	469_T	0.772	0.80
193_I	212_D	0.772	0.80
460_K	476_V	0.771	0.80
97_K	101_E	0.768	0.80
150_F	245_A	0.767	0.80
53_G	129_Y	0.767	0.80
217_A	220_T	0.766	0.80
348_E	351_R	0.761	0.79
441_A	455_I	0.761	0.79
39_L	64_M	0.759	0.79
28_M	107_L	0.759	0.79
314_L	423_L	0.756	0.79
271_L	400_T	0.754	0.79
274_H	411_K	0.752	0.78
452_W	461_A	0.750	0.78
476_V	487_L	0.748	0.78
193_I	221_V	0.748	0.78
214_L	221_V	0.746	0.78
417_L	420_L	0.744	0.78
476_V	479_S	0.744	0.78
460_K	463_W	0.743	0.78
198_L	446_L	0.740	0.77
28_M	103_T	0.737	0.77
283_Q	408_L	0.735	0.77
302_S	410_N	0.734	0.77
391_V	415_L	0.730	0.76
39_L	46_I	0.729	0.76
108_S	127_R	0.728	0.76
144_R	149_G	0.727	0.76
237_R	274_H	0.727	0.76
208_S	444_K	0.725	0.76
343_A	387_V	0.725	0.76
28_M	171_R	0.722	0.76
346_G	393_L	0.721	0.75
274_H	369_A	0.718	0.75
32_Y	158_T	0.718	0.75
102_T	106_V	0.716	0.75
247_N	276_Q	0.716	0.75
142_V	279_E	0.716	0.75
167_D	485_N	0.715	0.75
306_L	344_D	0.715	0.75
63_L	124_I	0.714	0.75
137_P	263_S	0.709	0.74
379_E	385_P	0.708	0.74
131_G	153_N	0.707	0.74
160_L	163_R	0.707	0.74
310_F	314_L	0.707	0.74
415_L	419_I	0.705	0.74
413_S	416_V	0.701	0.73
21_Y	24_N	0.701	0.73
187_I	194_A	0.698	0.73
336_I	366_G	0.697	0.73
46_I	115_V	0.696	0.73
404_Y	408_L	0.695	0.73
267_T	446_L	0.695	0.73
237_R	248_H	0.694	0.73
337_I	341_F	0.693	0.73
59_Y	126_V	0.693	0.73
158_T	186_S	0.692	0.72
77_P	80_L	0.692	0.72
234_P	274_H	0.692	0.72
333_H	352_M	0.690	0.72
166_R	259_D	0.689	0.72
30_T	203_E	0.687	0.72
245_A	429_L	0.687	0.72
153_N	259_D	0.686	0.72
463_W	476_V	0.686	0.72
211_V	214_L	0.685	0.72
148_D	246_A	0.683	0.71
308_I	454_L	0.681	0.71
219_K	223_E	0.681	0.71
271_L	299_I	0.681	0.71
39_L	68_V	0.679	0.71
181_S	215_T	0.677	0.71
22_F	28_M	0.677	0.71
161_L	246_A	0.677	0.71
368_I	395_A	0.674	0.70
188_C	257_I	0.673	0.70
458_N	461_A	0.672	0.70
394_A	418_M	0.672	0.70
274_H	403_S	0.671	0.70
331_D	392_S	0.670	0.70
452_W	456_P	0.670	0.70
151_V	156_V	0.668	0.70
307_P	404_Y	0.667	0.70
328_L	370_A	0.667	0.70
134_P	160_L	0.666	0.70
144_R	222_E	0.664	0.69
290_F	345_L	0.663	0.69
308_I	312_F	0.662	0.69
333_H	376_I	0.660	0.69
51_L	54_L	0.659	0.69
108_S	184_D	0.658	0.69
334_I	382_L	0.658	0.69
154_I	259_D	0.657	0.68
127_R	155_V	0.657	0.68
315_Q	426_I	0.657	0.68
81_V	122_F	0.657	0.68
463_W	469_T	0.656	0.68
315_Q	425_H	0.655	0.68
232_P	287_V	0.655	0.68
215_T	250_L	0.655	0.68
238_Y	263_S	0.654	0.68
328_L	384_S	0.654	0.68
241_R	266_I	0.653	0.68
366_G	444_K	0.653	0.68
128_S	135_E	0.652	0.68
35_G	50_Y	0.652	0.68
82_D	86_N	0.650	0.68
329_N	375_Q	0.650	0.68
278_A	282_R	0.650	0.68
381_G	456_P	0.649	0.68
140_E	328_L	0.649	0.68
269_T	401_T	0.649	0.68
173_K	187_I	0.649	0.68
272_F	296_F	0.647	0.67
275_V	406_L	0.646	0.67
416_V	436_L	0.644	0.67
38_K	85_E	0.643	0.67
349_F	366_G	0.643	0.67
104_D	297_F	0.639	0.66
378_I	385_P	0.638	0.66
219_K	224_F	0.638	0.66
375_Q	392_S	0.638	0.66
212_D	478_P	0.637	0.66
237_R	266_I	0.636	0.66
214_L	220_T	0.636	0.66
197_D	200_E	0.635	0.66
412_M	485_N	0.634	0.66
97_K	119_G	0.634	0.66
31_S	34_V	0.633	0.66
270_T	448_T	0.632	0.65
404_Y	407_S	0.632	0.65
142_V	146_A	0.632	0.65
68_V	71_N	0.631	0.65
318_L	404_Y	0.630	0.65
83_I	88_L	0.630	0.65
276_Q	292_R	0.629	0.65
15_P	18_N	0.629	0.65
350_L	368_I	0.628	0.65
130_P	156_V	0.628	0.65
217_A	282_R	0.627	0.65
140_E	298_G	0.625	0.65
185_L	221_V	0.624	0.65
336_I	371_V	0.622	0.64
192_D	484_K	0.622	0.64
225_I	446_L	0.621	0.64
135_E	138_D	0.621	0.64
198_L	448_T	0.621	0.64
283_Q	405_E	0.620	0.64
22_F	36_V	0.620	0.64
92_Q	165_I	0.620	0.64
448_T	481_V	0.619	0.64
57_T	153_N	0.619	0.64
340_I	391_V	0.617	0.64
179_E	485_N	0.615	0.63
232_P	412_M	0.615	0.63
34_V	190_I	0.615	0.63
164_R	246_A	0.614	0.63
45_E	116_E	0.613	0.63
22_F	47_Q	0.611	0.63
235_L	373_I	0.610	0.63
307_P	407_S	0.608	0.63
301_A	305_F	0.606	0.62
406_L	409_A	0.606	0.62
475_K	487_L	0.605	0.62
329_N	384_S	0.604	0.62
481_V	484_K	0.603	0.62
344_D	418_M	0.603	0.62
270_T	366_G	0.602	0.62
357_T	370_A	0.600	0.61
464_Q	474_A	0.597	0.61
53_G	163_R	0.596	0.61
304_L	429_L	0.595	0.61
418_M	421_V	0.595	0.61
48_L	124_I	0.594	0.61
196_P	199_V	0.594	0.61
211_V	218_D	0.592	0.60
305_F	393_L	0.591	0.60
153_N	163_R	0.590	0.60
481_V	486_R	0.590	0.60
462_L	465_V	0.590	0.60
227_N	445_S	0.589	0.60
131_G	151_V	0.588	0.60
355_I	360_A	0.588	0.60
347_I	354_A	0.588	0.60
173_K	191_E	0.587	0.60
377_A	383_F	0.587	0.60
175_T	256_I	0.586	0.60
232_P	344_D	0.586	0.60
54_L	163_R	0.585	0.60
237_R	244_V	0.585	0.60
352_M	376_I	0.584	0.59
344_D	407_S	0.583	0.59
429_L	432_G	0.583	0.59
419_I	423_L	0.583	0.59
437_I	441_A	0.583	0.59
251_E	276_Q	0.582	0.59
307_P	344_D	0.582	0.59
137_P	282_R	0.582	0.59
23_K	49_Y	0.581	0.59
248_H	253_H	0.581	0.59
397_G	457_F	0.581	0.59
187_I	199_V	0.581	0.59
316_P	336_I	0.581	0.59
308_I	426_I	0.581	0.59
352_M	356_H	0.580	0.59
225_I	236_V	0.580	0.59
357_T	373_I	0.580	0.59
81_V	120_F	0.579	0.59
48_L	111_V	0.579	0.59
80_L	84_V	0.578	0.59
300_L	304_L	0.576	0.58
445_S	449_P	0.576	0.58
218_D	265_I	0.576	0.58
220_T	251_E	0.575	0.58
83_I	87_R	0.575	0.58
458_N	479_S	0.575	0.58
276_Q	281_Y	0.575	0.58
382_L	389_L	0.575	0.58
464_Q	468_R	0.574	0.58
310_F	422_A	0.574	0.58
92_Q	153_N	0.573	0.58
302_S	398_T	0.573	0.58
95_K	122_F	0.571	0.58
418_M	424_F	0.571	0.58
357_T	361_L	0.570	0.58
463_W	474_A	0.569	0.57
321_D	375_Q	0.569	0.57
302_S	306_L	0.569	0.57
148_D	183_T	0.568	0.57
324_K	400_T	0.568	0.57
164_R	241_R	0.567	0.57
332_T	384_S	0.567	0.57
324_K	386_E	0.567	0.57
201_I	225_I	0.567	0.57
229_S	472_P	0.566	0.57
255_I	267_T	0.566	0.57
180_R	250_L	0.565	0.57
228_Q	235_L	0.563	0.57
350_L	388_I	0.562	0.57
366_G	371_V	0.562	0.57
306_L	390_Y	0.562	0.57
193_I	485_N	0.562	0.57
431_I	435_V	0.561	0.56
160_L	164_R	0.561	0.56
214_L	258_V	0.560	0.56
280_E	352_M	0.560	0.56
365_M	389_L	0.559	0.56
195_D	481_V	0.559	0.56
202_V	227_N	0.558	0.56
81_V	84_V	0.556	0.56
169_R	180_R	0.556	0.56
14_N	19_E	0.555	0.56
211_V	471_K	0.555	0.56
417_L	429_L	0.554	0.55
285_P	370_A	0.554	0.55
93_V	122_F	0.554	0.55
333_H	425_H	0.553	0.55
281_Y	463_W	0.553	0.55
311_L	421_V	0.551	0.55
269_T	272_F	0.551	0.55
149_G	263_S	0.550	0.55
269_T	346_G	0.550	0.55
37_R	151_V	0.550	0.55
205_E	445_S	0.549	0.55
294_V	372_L	0.548	0.55
16_A	38_K	0.548	0.55
209_I	224_F	0.547	0.55
468_R	471_K	0.547	0.55
147_R	263_S	0.547	0.55
115_V	476_V	0.547	0.55
372_L	440_M	0.547	0.55
319_L	322_N	0.547	0.55
253_H	276_Q	0.546	0.54
339_Q	352_M	0.546	0.54
101_E	105_Q	0.545	0.54
161_L	361_L	0.545	0.54
52_N	92_Q	0.545	0.54
170_L	249_V	0.545	0.54
239_T	402_P	0.545	0.54
194_A	198_L	0.545	0.54
353_A	395_A	0.545	0.54
417_L	433_F	0.544	0.54
22_F	114_I	0.544	0.54
161_L	164_R	0.544	0.54
319_L	360_A	0.544	0.54
454_L	465_V	0.544	0.54
64_M	251_E	0.542	0.54
151_V	184_D	0.542	0.54
314_L	425_H	0.542	0.54
201_I	208_S	0.542	0.54
299_I	401_T	0.540	0.54
32_Y	174_M	0.540	0.54
251_E	464_Q	0.540	0.54
154_I	184_D	0.539	0.53
274_H	344_D	0.539	0.53
236_V	371_V	0.537	0.53
354_A	360_A	0.537	0.53
468_R	474_A	0.536	0.53
192_D	318_L	0.535	0.53
150_F	264_V	0.534	0.53
210_D	477_R	0.534	0.53
20_E	23_K	0.534	0.53
52_N	57_T	0.534	0.53
135_E	423_L	0.534	0.53
97_K	100_D	0.533	0.53
146_A	405_E	0.533	0.53
230_Y	473_G	0.532	0.53
361_L	365_M	0.532	0.53
220_T	471_K	0.531	0.52
84_V	87_R	0.531	0.52
177_V	199_V	0.531	0.52
449_P	456_P	0.530	0.52
357_T	382_L	0.529	0.52
151_V	301_A	0.528	0.52
251_E	254_V	0.527	0.52
298_G	364_A	0.527	0.52
202_V	355_I	0.526	0.52
273_H	276_Q	0.524	0.51
105_Q	177_V	0.524	0.51
459_G	463_W	0.523	0.51
242_P	246_A	0.522	0.51
318_L	395_A	0.521	0.51
407_S	411_K	0.521	0.51
198_L	482_H	0.521	0.51
347_I	391_V	0.520	0.51
100_D	182_K	0.520	0.51
108_S	206_I	0.519	0.51
15_P	102_T	0.519	0.51
356_H	376_I	0.518	0.51
181_S	366_G	0.517	0.50
222_E	238_Y	0.517	0.50
384_S	425_H	0.516	0.50
304_L	414_R	0.516	0.50
179_E	196_P	0.515	0.50
190_I	206_I	0.515	0.50
229_S	284_A	0.514	0.50
25_R	99_L	0.513	0.50
217_A	221_V	0.512	0.50
391_V	398_T	0.512	0.50
360_A	366_G	0.512	0.50
114_I	122_F	0.511	0.50
232_P	241_R	0.511	0.50
299_I	370_A	0.510	0.50
28_M	167_D	0.510	0.50
144_R	218_D	0.510	0.50
193_I	199_V	0.510	0.50
303_T	410_N	0.509	0.49
198_L	201_I	0.508	0.49
273_H	354_A	0.508	0.49
351_R	413_S	0.507	0.49
55_C	196_P	0.507	0.49
88_L	124_I	0.507	0.49
222_E	265_I	0.507	0.49
129_Y	155_V	0.506	0.49
343_A	365_M	0.506	0.49
24_N	29_G	0.505	0.49
195_D	199_V	0.504	0.49
185_L	206_I	0.504	0.49
315_Q	367_L	0.502	0.48
391_V	418_M	0.502	0.48
150_F	157_N	0.502	0.48
332_T	389_L	0.502	0.48
183_T	213_G	0.501	0.48
298_G	480_I	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3hh1A	2	0.213	24	0.982	Contact Map
1s94A	1	0.2211	15.2	0.983	Contact Map
4bemA	3	0.1643	14.7	0.984	Contact Map
3kpeA	3	0.0994	14.5	0.984	Contact Map
2xndJ	3	0.146	9.8	0.985	Contact Map
2xquA	3	0.1643	9.6	0.985	Contact Map
4v1gA	3	0.1724	9.4	0.985	Contact Map
1ez3A	1	0.2231	8.2	0.985	Contact Map
3zk1A	5	0.1805	7.6	0.985	Contact Map
3h0lB	1	0.2434	6.6	0.986	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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