GREMLIN Database
GUAA - GMP synthase [glutamine-hydrolyzing]
UniProt: P29727 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 513 (508)
Sequences: 2681 (1072)
Seq/√Len: 47.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
91_M166_W4.8171.00
258_K414_E4.7371.00
52_G193_C4.5831.00
284_R312_D4.4631.00
161_K164_K4.2551.00
409_L413_R3.6631.00
313_E316_K3.5211.00
377_T383_D3.3931.00
212_I216_V3.2551.00
219_K321_D3.1721.00
377_T387_W3.1441.00
125_P180_Y2.8511.00
282_K406_E2.8001.00
210_Q214_E2.7701.00
433_W468_G2.7571.00
234_V324_A2.7401.00
304_N308_Y2.7231.00
433_W465_S2.6891.00
283_D287_N2.6751.00
464_T474_A2.6541.00
458_I495_I2.6501.00
465_S468_G2.6391.00
222_L320_I2.6291.00
9_I52_G2.6131.00
238_I324_A2.5961.00
250_F256_L2.5951.00
419_L460_I2.5781.00
503_T508_A2.5781.00
98_K140_E2.5681.00
387_W430_R2.5671.00
261_A278_K2.5171.00
122_R191_G2.4901.00
26_I54_I2.4531.00
476_I480_V2.4321.00
389_Q435_Y2.4121.00
236_V381_I2.3871.00
161_K165_K2.3651.00
317_L320_I2.3331.00
187_N191_G2.3261.00
208_E211_K2.2501.00
487_R491_E2.2501.00
292_V301_I2.1581.00
7_E197_G2.1521.00
453_T496_N2.1431.00
7_E51_K2.1321.00
288_K305_E2.1211.00
410_E413_R2.1161.00
115_E150_T2.1131.00
332_I365_N2.1101.00
250_F261_A2.1071.00
406_E410_E2.0961.00
124_L128_Q2.0781.00
480_V484_I2.0741.00
148_D160_S2.0631.00
265_M276_V2.0521.00
259_G262_E2.0401.00
190_F197_G2.0331.00
219_K322_Y2.0070.99
205_I375_L1.9850.99
428_L480_V1.9710.99
100_E139_V1.9370.99
262_E278_K1.9150.99
73_K76_E1.8940.99
118_P148_D1.8690.99
256_L261_A1.8680.99
265_M278_K1.8390.99
111_N127_E1.8330.99
234_V238_I1.8330.99
482_E486_T1.8290.99
421_E425_N1.8260.99
26_I189_V1.8230.99
223_C324_A1.8210.99
9_I189_V1.8050.99
36_H40_L1.7930.99
473_W478_W1.7740.99
55_L81_V1.7720.99
432_I474_A1.7710.99
266_K270_E1.7700.99
183_D186_K1.7470.98
9_I193_C1.7460.98
419_L484_I1.7460.98
252_D278_K1.7300.98
51_K195_C1.7280.98
288_K304_N1.7270.98
52_G195_C1.7260.98
222_L249_I1.7170.98
44_E47_K1.7100.98
201_M375_L1.7030.98
489_V503_T1.7000.98
118_P160_S1.7000.98
180_Y183_D1.6910.98
383_D430_R1.6890.98
432_I476_I1.6860.98
10_L36_H1.6810.98
259_G263_G1.6620.98
438_V512_W1.6510.98
284_R305_E1.6490.98
258_K417_A1.6470.98
128_Q180_Y1.6460.98
129_V179_E1.6390.98
146_T162_A1.6380.98
377_T430_R1.6250.98
457_T499_V1.6210.98
215_T359_E1.6180.97
286_L409_L1.6110.97
75_F91_M1.6050.97
308_Y311_D1.5990.97
218_D245_Q1.5900.97
417_A421_E1.5860.97
448_M453_T1.5840.97
92_T142_P1.5770.97
121_F158_A1.5390.97
10_L45_I1.5380.97
112_I149_A1.5180.96
88_M138_V1.5080.96
374_A377_T1.5040.96
221_V324_A1.4950.96
46_K77_L1.4920.96
70_C90_L1.4820.96
159_M168_G1.4780.96
420_R429_E1.4760.96
428_L431_D1.4670.95
472_D504_S1.4640.95
205_I209_M1.4410.95
92_T159_M1.4280.95
337_T340_A1.4190.95
284_R288_K1.4130.94
422_E425_N1.4040.94
215_T361_I1.3990.94
426_H483_V1.3960.94
355_D358_F1.3940.94
400_V409_L1.3920.94
475_R482_E1.3920.94
462_A474_A1.3720.94
290_K403_E1.3680.93
8_M48_M1.3620.93
113_R150_T1.3600.93
238_I361_I1.3550.93
448_M489_V1.3520.93
321_D359_E1.3450.93
70_C75_F1.3310.92
220_Q319_G1.3300.92
297_Q301_I1.3280.92
12_L36_H1.3260.92
429_E435_Y1.3230.92
408_K456_Y1.3230.92
144_G161_K1.3220.92
405_T408_K1.3200.92
463_V510_I1.3200.92
223_C238_I1.3180.92
336_G340_A1.3120.92
262_E266_K1.3090.92
211_K215_T1.3050.92
384_E424_A1.3010.92
39_T338_A1.3000.92
440_P459_G1.2970.91
420_R435_Y1.2940.91
261_A280_D1.2930.91
448_M496_N1.2910.91
247_T277_I1.2880.91
220_Q245_Q1.2870.91
459_G499_V1.2790.91
113_R127_E1.2790.91
311_D356_M1.2780.91
105_R135_G1.2760.91
41_T44_E1.2620.90
422_E487_R1.2580.90
283_D406_E1.2530.90
69_R94_Y1.2530.90
415_S437_T1.2440.90
202_E378_E1.2390.89
406_E409_L1.2330.89
223_C235_A1.2320.89
261_A265_M1.2290.89
141_V156_N1.2220.89
460_I484_I1.2190.89
426_H480_V1.2160.89
40_L44_E1.2070.88
232_S381_I1.1990.88
42_A71_D1.1990.88
443_R455_D1.1980.88
419_L437_T1.1920.88
244_D273_N1.1900.87
455_D494_H1.1830.87
305_E308_Y1.1820.87
225_L248_C1.1820.87
186_K191_G1.1800.87
389_Q420_R1.1790.87
19_N35_L1.1720.87
249_I279_V1.1680.86
7_E196_E1.1570.86
116_G146_T1.1560.86
431_D464_T1.1550.86
14_F55_L1.1530.86
411_I494_H1.1520.86
40_L45_I1.1450.85
411_I495_I1.1400.85
6_N198_E1.1370.85
125_P128_Q1.1370.85
140_E143_E1.1360.85
30_G200_S1.1250.84
69_R93_H1.1240.84
423_I435_Y1.1210.84
268_F276_V1.1170.84
98_K139_V1.1100.83
305_E309_V1.1090.83
208_E212_I1.1010.83
473_W485_S1.1000.83
499_V512_W1.0960.83
411_I456_Y1.0920.82
9_I195_C1.0910.82
311_D357_Q1.0890.82
277_I316_K1.0860.82
124_L180_Y1.0850.82
210_Q213_R1.0850.82
216_V245_Q1.0840.82
293_S403_E1.0840.82
297_Q304_N1.0800.82
291_G403_E1.0790.82
156_N159_M1.0770.82
252_D282_K1.0760.82
423_I426_H1.0740.81
389_Q423_I1.0730.81
282_K410_E1.0730.81
131_W177_H1.0720.81
424_A429_E1.0700.81
425_N483_V1.0700.81
119_D160_S1.0640.81
146_T160_S1.0620.81
481_L502_I1.0600.81
292_V297_Q1.0590.80
475_R479_D1.0550.80
265_M269_S1.0540.80
212_I238_I1.0470.80
125_P179_E1.0400.79
437_T458_I1.0390.79
151_S154_C1.0370.79
255_L397_G1.0360.79
422_E491_E1.0320.79
35_L333_I1.0280.78
216_V361_I1.0260.78
223_C248_C1.0220.78
437_T495_I1.0210.78
212_I361_I1.0150.78
112_I151_S1.0130.77
419_L462_A1.0130.77
432_I462_A1.0090.77
149_A158_A1.0050.77
422_E483_V1.0050.77
236_V272_F0.9980.76
377_T386_V0.9960.76
6_N207_I0.9930.76
201_M204_F0.9920.76
389_Q429_E0.9890.76
263_G384_E0.9860.75
42_A73_K0.9830.75
256_L264_V0.9810.75
336_G339_T0.9800.75
41_T45_I0.9750.75
412_V438_V0.9690.74
253_H286_L0.9670.74
72_E76_E0.9660.74
294_D297_Q0.9630.74
23_T35_L0.9610.74
43_E47_K0.9570.73
206_E210_Q0.9560.73
78_D81_V0.9550.73
221_V242_I0.9540.73
315_D357_Q0.9520.73
115_E146_T0.9520.73
204_F375_L0.9460.72
288_K301_I0.9450.72
220_Q247_T0.9430.72
102_A137_L0.9410.72
414_E417_A0.9410.72
109_K131_W0.9400.72
88_M159_M0.9360.72
29_F185_L0.9320.71
52_G189_V0.9300.71
142_P159_M0.9300.71
318_K321_D0.9280.71
400_V413_R0.9270.71
137_L154_C0.9270.71
70_C94_Y0.9270.71
141_V147_V0.9240.71
169_V173_P0.9220.70
341_Q451_A0.9210.70
109_K129_V0.9190.70
286_L413_R0.9180.70
282_K286_L0.9170.70
224_A307_I0.9150.70
410_E414_E0.9130.70
250_F264_V0.9130.70
349_V352_L0.9110.70
485_S503_T0.9100.69
30_G374_A0.9100.69
186_K197_G0.9070.69
147_V156_N0.9010.69
444_S457_T0.8950.68
169_V184_L0.8940.68
233_V376_G0.8920.68
356_M360_L0.8900.68
281_A309_V0.8850.67
119_D148_D0.8850.67
165_K194_E0.8840.67
354_E357_Q0.8830.67
7_E195_C0.8820.67
175_V470_T0.8810.67
406_E413_R0.8780.67
302_I397_G0.8760.66
10_L48_M0.8730.66
171_F184_L0.8730.66
111_N152_H0.8730.66
322_Y359_E0.8720.66
284_R309_V0.8710.66
124_L183_D0.8680.66
251_V309_V0.8680.66
423_I432_I0.8660.66
128_Q179_E0.8640.65
279_V313_E0.8640.65
236_V274_M0.8620.65
39_T339_T0.8610.65
455_D489_V0.8580.65
267_T385_I0.8540.64
229_V376_G0.8540.64
43_E46_K0.8530.64
28_E470_T0.8510.64
383_D387_W0.8500.64
420_R424_A0.8480.64
268_F273_N0.8480.64
268_F274_M0.8460.64
408_K439_L0.8440.64
251_V279_V0.8440.64
178_S184_L0.8430.63
61_S136_D0.8420.63
91_M95_L0.8410.63
269_S276_V0.8410.63
252_D265_M0.8390.63
286_L406_E0.8380.63
311_D355_D0.8380.63
324_A361_I0.8340.63
421_E487_R0.8340.63
90_L94_Y0.8320.62
12_L41_T0.8320.62
253_H305_E0.8320.62
93_H98_K0.8280.62
204_F208_E0.8270.62
150_T154_C0.8240.62
312_D316_K0.8240.62
137_L155_P0.8230.62
207_I211_K0.8230.62
74_I81_V0.8230.62
162_A165_K0.8210.61
75_F94_Y0.8210.61
111_N129_V0.8200.61
287_N290_K0.8180.61
144_G165_K0.8170.61
457_T512_W0.8160.61
200_S203_N0.8160.61
11_V19_N0.8150.61
88_M168_G0.8130.61
209_M241_A0.8100.60
374_A378_E0.8100.60
428_L432_I0.8090.60
263_G417_A0.8040.60
24_R28_E0.8000.59
311_D315_D0.7980.59
30_G197_G0.7980.59
186_K190_F0.7980.59
248_C268_F0.7970.59
249_I320_I0.7970.59
189_V195_C0.7860.58
60_N341_Q0.7850.58
46_K73_K0.7840.58
42_A46_K0.7840.58
232_S268_F0.7820.58
117_T126_N0.7800.57
483_V486_T0.7800.57
213_R245_Q0.7790.57
427_G432_I0.7760.57
81_V166_W0.7760.57
31_V190_F0.7740.57
203_N378_E0.7740.57
50_P79_I0.7720.57
161_K166_W0.7710.57
440_P457_T0.7690.56
412_V512_W0.7650.56
330_T365_N0.7640.56
441_D455_D0.7630.56
455_D493_K0.7620.56
354_E359_E0.7590.55
350_G353_P0.7540.55
234_V364_L0.7540.55
422_E426_H0.7530.55
59_P68_F0.7520.55
225_L268_F0.7490.54
220_Q320_I0.7490.54
29_F189_V0.7480.54
135_G451_A0.7480.54
113_R126_N0.7470.54
225_L276_V0.7470.54
262_E282_K0.7440.54
63_Y451_A0.7430.54
255_L286_L0.7410.54
464_T472_D0.7390.53
223_C328_L0.7370.53
457_T508_A0.7350.53
482_E485_S0.7340.53
69_R90_L0.7340.53
8_M50_P0.7330.53
119_D191_G0.7330.53
443_R456_Y0.7320.53
20_Q368_F0.7320.53
29_F182_N0.7310.53
28_E182_N0.7290.52
412_V415_S0.7270.52
130_V178_S0.7260.52
314_A320_I0.7250.52
222_L321_D0.7220.52
95_L166_W0.7210.52
160_S165_K0.7190.51
208_E375_L0.7190.51
16_S56_S0.7180.51
441_D457_T0.7160.51
73_K77_L0.7160.51
92_T168_G0.7150.51
176_R468_G0.7150.51
480_V483_V0.7140.51
432_I464_T0.7140.51
63_Y67_S0.7130.51
31_V195_C0.7120.51
29_F186_K0.7120.51
502_I512_W0.7080.50
21_L132_M0.7080.50
45_I50_P0.7070.50
501_D513_E0.7070.50
144_G162_A0.7070.50
81_V94_Y0.7070.50
448_M455_D0.7050.50
389_Q474_A0.7050.50
119_D165_K0.7020.50
183_D187_N0.7010.50
350_G365_N0.6970.49
109_K472_D0.6970.49
120_L184_L0.6960.49
82_L120_L0.6950.49
104_Q153_H0.6930.49
212_I360_L0.6930.49
176_R466_I0.6910.49
11_V23_T0.6900.49
113_R152_H0.6900.49
176_R465_S0.6870.48
131_W472_D0.6860.48
437_T459_G0.6840.48
438_V499_V0.6830.48
82_L167_Y0.6820.48
36_H45_I0.6820.48
63_Y136_D0.6800.48
121_F171_F0.6790.47
401_L444_S0.6780.47
220_Q275_N0.6770.47
259_G417_A0.6750.47
307_I350_G0.6750.47
416_D501_D0.6750.47
290_K406_E0.6740.47
31_V189_V0.6730.47
101_A451_A0.6730.47
333_I339_T0.6730.47
12_L40_L0.6730.47
203_N206_E0.6720.47
121_F178_S0.6720.47
448_M492_V0.6710.47
121_F187_N0.6710.47
419_L423_I0.6680.46
110_A131_W0.6670.46
84_I169_V0.6660.46
128_Q178_S0.6660.46
415_S419_L0.6660.46
211_K214_E0.6620.46
473_W502_I0.6610.46
462_A476_I0.6600.46
222_L358_F0.6600.46
112_I128_Q0.6600.46
222_L234_V0.6570.45
415_S458_I0.6560.45
485_S502_I0.6550.45
465_S472_D0.6550.45
253_H503_T0.6540.45
474_A477_P0.6530.45
34_E48_M0.6520.45
205_I240_K0.6520.45
119_D192_V0.6500.45
242_I246_L0.6500.45
10_L40_L0.6490.44
123_D191_G0.6480.44
107_Y135_G0.6460.44
116_G119_D0.6450.44
46_K49_N0.6450.44
419_L435_Y0.6450.44
19_N56_S0.6450.44
110_A132_M0.6450.44
112_I130_V0.6440.44
11_V35_L0.6430.44
123_D183_D0.6400.44
29_F190_F0.6400.44
339_T342_T0.6400.44
76_E164_K0.6390.43
304_N354_E0.6390.43
252_D261_A0.6390.43
293_S404_V0.6380.43
351_G365_N0.6380.43
460_I480_V0.6370.43
16_S19_N0.6360.43
221_V238_I0.6360.43
322_Y358_F0.6330.43
345_S361_I0.6330.43
307_I311_D0.6320.43
221_V245_Q0.6320.43
105_R451_A0.6310.43
123_D187_N0.6310.43
224_A324_A0.6290.42
40_L48_M0.6280.42
424_A435_Y0.6260.42
176_R433_W0.6260.42
307_I361_I0.6240.42
497_R501_D0.6240.42
485_S489_V0.6220.42
81_V91_M0.6170.41
68_F381_I0.6170.41
375_L486_T0.6170.41
55_L75_F0.6170.41
485_S508_A0.6170.41
72_E94_Y0.6140.41
74_I77_L0.6140.41
40_L47_K0.6130.41
82_L169_V0.6120.41
63_Y69_R0.6120.41
239_H274_M0.6110.41
389_Q412_V0.6110.41
119_D122_R0.6100.41
53_I79_I0.6100.41
244_D275_N0.6090.41
62_V93_H0.6080.40
475_R478_W0.6070.40
58_G68_F0.6070.40
63_Y93_H0.6070.40
307_I320_I0.6070.40
489_V494_H0.6060.40
95_L164_K0.6060.40
236_V386_V0.6060.40
419_L480_V0.6050.40
412_V478_W0.6050.40
85_C89_Q0.6040.40
328_L468_G0.6030.40
121_F148_D0.6020.40
85_C134_H0.6020.40
266_K271_G0.6010.40
36_H44_E0.6010.40
440_P455_D0.6000.40
255_L289_L0.5990.40
120_L192_V0.5990.40
223_C268_F0.5980.39
454_Y497_R0.5970.39
297_Q300_K0.5960.39
458_I498_V0.5960.39
107_Y451_A0.5950.39
90_L107_Y0.5950.39
223_C246_L0.5930.39
260_E388_R0.5930.39
439_L501_D0.5920.39
336_G342_T0.5910.39
229_V232_S0.5900.39
155_P268_F0.5890.39
472_D475_R0.5880.39
401_L442_I0.5880.39
219_K245_Q0.5860.38
240_K244_D0.5850.38
438_V442_I0.5840.38
58_G62_V0.5840.38
114_I127_E0.5840.38
259_G414_E0.5830.38
42_A77_L0.5830.38
418_I421_E0.5830.38
235_A248_C0.5820.38
182_N186_K0.5820.38
10_L50_P0.5820.38
11_V33_S0.5790.38
307_I345_S0.5780.38
85_C450_D0.5770.37
315_D355_D0.5770.37
473_W477_P0.5770.37
117_T192_V0.5760.37
160_S167_Y0.5750.37
270_E384_E0.5750.37
99_V136_D0.5750.37
26_I330_T0.5730.37
12_L45_I0.5720.37
36_H41_T0.5720.37
36_H48_M0.5710.37
202_E486_T0.5700.37
9_I110_A0.5700.37
307_I352_L0.5690.37
100_E137_L0.5680.37
247_T275_N0.5680.37
124_L178_S0.5680.37
89_Q170_Q0.5680.37
444_S508_A0.5640.36
248_C273_N0.5640.36
144_G164_K0.5640.36
437_T500_Y0.5630.36
119_D162_A0.5630.36
202_E207_I0.5620.36
225_L246_L0.5620.36
140_E185_L0.5620.36
307_I349_V0.5620.36
102_A139_V0.5610.36
85_C343_I0.5610.36
432_I480_V0.5610.36
249_I314_A0.5610.36
8_M238_I0.5600.36
85_C108_G0.5590.36
224_A311_D0.5590.36
279_V284_R0.5590.36
92_T141_V0.5590.36
389_Q419_L0.5580.36
483_V487_R0.5570.36
163_D167_Y0.5570.36
17_Q85_C0.5570.36
18_Y451_A0.5570.36
309_V312_D0.5560.36
268_F376_G0.5560.36
12_L70_C0.5560.36
91_M145_F0.5560.36
224_A320_I0.5550.35
401_L455_D0.5540.35
18_Y175_V0.5540.35
473_W482_E0.5540.35
423_I427_G0.5530.35
11_V345_S0.5520.35
185_L189_V0.5520.35
435_Y462_A0.5520.35
336_G366_T0.5520.35
398_I464_T0.5510.35
472_D482_E0.5510.35
16_S336_G0.5500.35
118_P162_A0.5500.35
85_C449_G0.5500.35
234_V274_M0.5490.35
121_F345_S0.5490.35
131_W504_S0.5490.35
438_V458_I0.5490.35
16_S324_A0.5480.35
265_M274_M0.5480.35
171_F178_S0.5470.35
482_E504_S0.5470.35
313_E317_L0.5450.35
156_N385_I0.5450.35
65_E218_D0.5450.35
352_L365_N0.5440.34
477_P480_V0.5430.34
304_N356_M0.5420.34
137_L153_H0.5420.34
16_S441_D0.5420.34
56_S328_L0.5410.34
267_T273_N0.5410.34
444_S497_R0.5400.34
440_P503_T0.5400.34
308_Y355_D0.5400.34
114_I124_L0.5390.34
224_A238_I0.5390.34
478_W485_S0.5390.34
499_V502_I0.5390.34
162_A167_Y0.5390.34
400_V404_V0.5390.34
209_M236_V0.5380.34
437_T460_I0.5380.34
120_L169_V0.5360.34
328_L339_T0.5350.34
144_G160_S0.5350.34
463_V508_A0.5350.34
208_E216_V0.5340.34
269_S272_F0.5340.34
436_F462_A0.5340.34
328_L337_T0.5340.34
445_V452_R0.5330.33
161_K167_Y0.5330.33
107_Y192_V0.5330.33
405_T439_L0.5330.33
368_F439_L0.5330.33
415_S495_I0.5320.33
483_V491_E0.5320.33
398_I439_L0.5320.33
102_A105_R0.5310.33
320_I361_I0.5310.33
453_T492_V0.5310.33
426_H432_I0.5310.33
198_E398_I0.5300.33
89_Q99_V0.5300.33
397_G406_E0.5290.33
19_N468_G0.5290.33
211_K366_T0.5280.33
35_L489_V0.5280.33
300_K351_G0.5280.33
41_T72_E0.5270.33
205_I212_I0.5270.33
101_A493_K0.5250.33
269_S274_M0.5250.33
343_I450_D0.5240.33
26_I29_F0.5240.33
62_V99_V0.5240.33
215_T365_N0.5230.33
11_V63_Y0.5220.32
106_E134_H0.5220.32
234_V361_I0.5220.32
51_K58_G0.5200.32
205_I378_E0.5200.32
26_I31_V0.5190.32
277_I317_L0.5180.32
410_E495_I0.5170.32
104_Q137_L0.5170.32
454_Y496_N0.5170.32
328_L433_W0.5170.32
105_R448_M0.5170.32
205_I379_L0.5160.32
349_V353_P0.5160.32
185_L443_R0.5150.32
290_K404_V0.5150.32
74_I166_W0.5150.32
8_M49_N0.5150.32
485_S499_V0.5150.32
328_L472_D0.5150.32
16_S440_P0.5140.32
44_E48_M0.5140.32
457_T495_I0.5140.32
398_I490_N0.5140.32
435_Y500_Y0.5130.32
401_L441_D0.5130.32
284_R308_Y0.5130.32
253_H339_T0.5110.32
434_Q461_R0.5110.32
328_L465_S0.5100.31
307_I360_L0.5100.31
140_E165_K0.5100.31
138_V147_V0.5100.31
12_L19_N0.5080.31
425_N491_E0.5080.31
59_P62_V0.5080.31
38_H68_F0.5080.31
248_C272_F0.5070.31
60_N339_T0.5070.31
442_I457_T0.5060.31
311_D358_F0.5050.31
486_T490_N0.5040.31
256_L272_F0.5040.31
461_R501_D0.5030.31
60_N268_F0.5030.31
232_S376_G0.5020.31
411_I415_S0.5020.31
267_T274_M0.5010.31
404_V409_L0.5010.31
412_V501_D0.5000.31
261_A282_K0.5000.31
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3tqiA 3 0.8889 100 0.312 Contact Map
1gpmA 3 0.961 100 0.316 Contact Map
3uowA 2 0.9376 100 0.327 Contact Map
2ywbA 4 0.922 100 0.328 Contact Map
2vxoA 2 0.9825 100 0.34 Contact Map
2dplA 2 0.5595 100 0.609 Contact Map
2vpiA 1 0.3626 100 0.803 Contact Map
2lxnA 1 0.3645 100 0.827 Contact Map
3r75A 2 0.3684 100 0.839 Contact Map
1qdlB 2 0.3606 100 0.84 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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