SUBV - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

SUBV - Minor extracellular protease vpr

UniProt:	P29141	Sequences: MKKGIIRFLLVSFVLFFALSTGITGVQAAPASSKTSADLEKAEVFGDIDMTTSKKTTVIVELKEKSLAEAKEAGESQSKSKLKTARTKAKNKAIKAVKNGKVNREYEQVFSGFSMKLPANEIPKLLAVKDVKAVYPNVTYKTDNMKDKDVTISEDAVSPQMDDSAPYIGANDAWDLGYTGKGIKVAIIDTGVEYNHPDLKKNFGQYKGYDFVDNDYDPKETPTGDPRGEATDHGTHVAGTVAANGTIKGVAPDATLLAYRVLGPGGSGTTENVIAGVERAVQDGADVMNLSLGNSLNNPDWATSTALDWAMSEGVVAVTSNGNSGPNGWTVGSPGTSREAISVGATQLPLNEYAVTFGSYSSAKVMGYNKEDDVKALNNKEVELVEAGIGEAKDFEGKDLTGKVAVVKRGSIAFVDKADNAKKAGAIGMVVYNNLSGEIEANVPGMSVPTIKLSLEDGEKLVSALKAGETKTTFKLTVSKALGEQVADFSSRGPVMDTWMIKPDISAPGVNIVSTIPTHDPDHPYGYGSKQGTSMASPHIAGAVAVIKQAKPKWSVEQIKAAIMNTAVTLKDSDGEVYPHNAQGAGSARIMNAIKADSLVSPGSYSYGTFLKENGNETKNETFTIENQSSIRKSYTLEYSFNGSGISTSGTSRVVIPAHQTGKATAKVKVNTKKTKAGTYEGTVIVREGGKTVAKVPTLLIVKEPDYPRVTSVSVSEGSVQGTYQIETYLPAGAEELAFLVYDSNLDFAGQAGIYKNQDKGYQYFDWDGTINGGTKLPAGEYYLLAYAANKGKSSQVLTEEPFTVE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	806 (626)
Sequences:	2327 (1801)
Seq/√Len:	72.0

BACSU - SUBV

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
320_S	537_S	5.341	1.00
421_A	426_A	5.143	1.00
185_V	241_V	4.713	1.00
345_A	487_A	4.619	1.00
543_A	588_A	4.182	1.00
262_L	268_G	4.151	1.00
344_G	506_S	4.080	1.00
143_D	320_S	3.886	1.00
238_A	258_A	3.808	1.00
320_S	536_A	3.805	1.00
206_Y	210_D	3.753	1.00
606_S	612_K	3.624	1.00
188_I	261_V	3.535	1.00
516_I	528_G	3.520	1.00
410_G	417_K	3.358	1.00
608_G	612_K	3.349	1.00
186_A	285_A	3.293	1.00
486_V	506_S	3.070	1.00
606_S	611_L	3.063	1.00
281_V	315_V	3.019	1.00
605_Y	608_G	2.974	1.00
345_A	489_F	2.972	1.00
657_P	660_Q	2.959	1.00
409_R	433_N	2.877	1.00
487_A	510_V	2.856	1.00
137_N	271_E	2.852	1.00
179_T	253_D	2.846	1.00
626_E	661_T	2.814	1.00
608_G	611_L	2.734	1.00
316_V	341_I	2.728	1.00
453_L	461_L	2.630	1.00
181_K	253_D	2.619	1.00
634_S	655_V	2.597	1.00
605_Y	612_K	2.539	1.00
420_N	423_K	2.508	1.00
207_K	210_D	2.503	1.00
540_I	588_A	2.500	1.00
229_E	232_D	2.497	1.00
548_K	559_I	2.496	1.00
409_R	414_F	2.484	1.00
261_V	276_G	2.469	1.00
543_A	590_I	2.426	1.00
206_Y	211_F	2.425	1.00
78_S	82_L	2.396	1.00
345_A	510_V	2.364	1.00
609_T	612_K	2.341	1.00
606_S	610_F	2.331	1.00
131_V	134_V	2.326	1.00
605_Y	611_L	2.308	1.00
508_P	512_I	2.306	1.00
516_I	530_K	2.239	1.00
316_V	544_V	2.215	1.00
207_K	211_F	2.207	1.00
164_S	167_Y	2.200	1.00
409_R	417_K	2.190	1.00
210_D	216_Y	2.190	1.00
484_E	587_S	2.149	1.00
455_L	459_E	2.133	1.00
273_V	292_L	2.122	1.00
606_S	609_T	2.100	1.00
243_A	515_T	2.097	1.00
555_S	558_Q	2.086	1.00
236_H	535_M	2.068	1.00
63_K	130_D	2.065	1.00
195_N	228_G	2.045	1.00
568_V	589_R	2.040	1.00
489_F	510_V	2.032	1.00
684_V	698_T	2.017	1.00
213_D	216_Y	1.993	1.00
187_I	241_V	1.987	1.00
604_S	608_G	1.986	1.00
589_R	592_N	1.985	1.00
257_L	285_A	1.954	1.00
419_D	423_K	1.954	1.00
173_A	594_I	1.951	1.00
414_F	444_P	1.923	1.00
122_I	134_V	1.911	1.00
505_I	540_I	1.900	1.00
454_S	457_D	1.900	1.00
414_F	417_K	1.897	1.00
222_P	225_D	1.893	1.00
414_F	431_V	1.890	1.00
199_L	515_T	1.889	1.00
408_K	462_V	1.876	1.00
182_G	255_T	1.874	1.00
543_A	563_I	1.872	1.00
417_K	433_N	1.867	1.00
611_L	614_N	1.856	1.00
347_Q	510_V	1.844	1.00
404_V	428_G	1.832	1.00
656_I	660_Q	1.828	1.00
430_V	451_I	1.824	1.00
86_R	90_K	1.823	1.00
346_T	506_S	1.816	1.00
319_T	340_A	1.809	1.00
140_Y	270_T	1.800	1.00
386_E	408_K	1.789	1.00
406_V	432_Y	1.784	1.00
624_T	661_T	1.783	1.00
210_D	221_T	1.783	1.00
382_V	427_I	1.758	1.00
600_V	696_V	1.713	1.00
277_V	307_L	1.711	1.00
318_V	541_A	1.704	1.00
554_W	562_A	1.701	1.00
505_I	563_I	1.694	1.00
259_Y	283_D	1.680	1.00
604_S	612_K	1.664	1.00
86_R	89_A	1.661	1.00
418_A	450_T	1.653	1.00
86_R	105_E	1.644	1.00
605_Y	609_T	1.642	1.00
210_D	215_D	1.619	0.99
104_R	275_A	1.611	0.99
193_E	228_G	1.609	0.99
602_P	606_S	1.607	0.99
274_I	306_A	1.602	0.99
598_S	635_Y	1.583	0.99
407_V	429_M	1.582	0.99
624_T	663_K	1.578	0.99
239_G	515_T	1.572	0.99
688_E	692_T	1.568	0.99
337_S	340_A	1.556	0.99
188_I	276_G	1.528	0.99
405_A	427_I	1.526	0.99
625_I	654_V	1.526	0.99
199_L	239_G	1.525	0.99
261_V	292_L	1.518	0.99
165_A	168_I	1.513	0.99
620_N	667_K	1.509	0.99
287_V	316_V	1.507	0.99
218_P	221_T	1.504	0.99
408_K	432_Y	1.492	0.99
550_A	594_I	1.486	0.99
605_Y	610_F	1.482	0.99
580_H	681_E	1.481	0.99
281_V	309_W	1.480	0.99
124_K	127_A	1.476	0.99
208_G	211_F	1.452	0.99
239_G	514_S	1.451	0.99
402_G	427_I	1.439	0.99
457_D	460_K	1.438	0.99
185_V	254_A	1.438	0.99
540_I	563_I	1.436	0.99
281_V	310_A	1.434	0.99
199_L	238_A	1.432	0.99
564_M	585_A	1.431	0.99
537_S	541_A	1.429	0.99
390_G	393_K	1.419	0.99
123_P	126_L	1.417	0.99
410_G	433_N	1.413	0.98
277_V	290_L	1.404	0.98
241_V	542_G	1.395	0.98
507_A	540_I	1.395	0.98
240_T	539_H	1.390	0.98
664_A	668_V	1.378	0.98
390_G	394_D	1.378	0.98
604_S	610_F	1.367	0.98
114_S	271_E	1.363	0.98
547_I	559_I	1.359	0.98
192_V	258_A	1.357	0.98
407_V	421_A	1.355	0.98
235_T	517_P	1.347	0.98
142_T	262_L	1.315	0.98
607_Y	611_L	1.310	0.97
211_F	221_T	1.310	0.97
184_K	257_L	1.307	0.97
106_Y	114_S	1.305	0.97
489_F	531_Q	1.301	0.97
506_S	536_A	1.299	0.97
604_S	609_T	1.298	0.97
386_E	432_Y	1.297	0.97
602_P	612_K	1.297	0.97
341_I	540_I	1.292	0.97
551_K	554_W	1.285	0.97
86_R	111_S	1.280	0.97
381_E	473_T	1.277	0.97
148_K	250_V	1.276	0.97
446_M	450_T	1.264	0.97
279_R	282_Q	1.262	0.97
414_F	433_N	1.256	0.97
606_S	614_N	1.256	0.97
230_A	264_P	1.255	0.97
666_A	670_V	1.249	0.97
285_A	315_V	1.247	0.97
242_A	256_L	1.246	0.97
108_Q	278_E	1.245	0.97
289_N	537_S	1.243	0.97
217_D	220_E	1.242	0.97
206_Y	221_T	1.239	0.96
422_K	447_S	1.232	0.96
106_Y	112_G	1.231	0.96
216_Y	221_T	1.230	0.96
383_E	403_K	1.230	0.96
78_S	86_R	1.228	0.96
487_A	531_Q	1.223	0.96
432_Y	462_V	1.219	0.96
666_A	684_V	1.213	0.96
560_K	564_M	1.212	0.96
610_F	613_E	1.209	0.96
492_R	582_A	1.209	0.96
304_S	337_S	1.208	0.96
240_T	535_M	1.201	0.96
674_K	678_G	1.200	0.96
63_K	132_K	1.197	0.96
168_I	172_D	1.194	0.96
416_D	420_N	1.194	0.96
453_L	457_D	1.192	0.96
598_S	625_I	1.189	0.96
636_T	653_R	1.188	0.96
505_I	588_A	1.186	0.95
89_A	93_A	1.185	0.95
346_T	587_S	1.182	0.95
405_A	426_A	1.178	0.95
104_R	114_S	1.176	0.95
327_N	330_T	1.174	0.95
606_S	613_E	1.174	0.95
608_G	614_N	1.169	0.95
547_I	594_I	1.167	0.95
616_N	619_K	1.162	0.95
405_A	421_A	1.151	0.95
109_V	278_E	1.151	0.95
406_V	465_L	1.150	0.95
318_V	537_S	1.146	0.95
486_V	490_S	1.143	0.94
396_E	399_D	1.138	0.94
167_Y	172_D	1.138	0.94
210_D	213_D	1.134	0.94
139_T	269_T	1.131	0.94
363_A	453_L	1.130	0.94
418_A	429_M	1.129	0.94
418_A	446_M	1.127	0.94
412_I	420_N	1.127	0.94
109_V	281_V	1.126	0.94
142_T	268_G	1.124	0.94
250_V	543_A	1.124	0.94
675_T	678_G	1.122	0.94
308_D	339_E	1.120	0.94
277_V	288_M	1.119	0.94
57_T	116_K	1.118	0.94
64_E	85_A	1.118	0.94
206_Y	255_T	1.117	0.94
625_I	686_V	1.116	0.94
216_Y	219_K	1.115	0.94
186_A	280_A	1.113	0.94
211_F	279_R	1.112	0.94
433_N	437_G	1.112	0.94
604_S	611_L	1.108	0.94
78_S	81_K	1.106	0.93
190_T	231_T	1.103	0.93
222_P	226_P	1.101	0.93
409_R	434_N	1.100	0.93
630_S	659_H	1.100	0.93
273_V	290_L	1.097	0.93
664_A	686_V	1.097	0.93
664_A	670_V	1.097	0.93
602_P	611_L	1.095	0.93
61_E	135_Y	1.094	0.93
326_P	330_T	1.094	0.93
251_A	545_A	1.087	0.93
206_Y	209_Y	1.086	0.93
663_K	666_A	1.085	0.93
637_L	684_V	1.085	0.93
654_V	664_A	1.082	0.93
279_R	283_D	1.079	0.93
187_I	238_A	1.078	0.93
206_Y	216_Y	1.078	0.93
187_I	237_V	1.077	0.93
654_V	662_G	1.073	0.92
558_Q	626_E	1.073	0.92
207_K	257_L	1.072	0.92
410_G	414_F	1.071	0.92
417_K	431_V	1.071	0.92
295_S	324_S	1.069	0.92
633_K	688_E	1.068	0.92
236_H	240_T	1.067	0.92
382_V	385_V	1.065	0.92
418_A	448_V	1.064	0.92
414_F	434_N	1.064	0.92
183_I	545_A	1.059	0.92
138_V	270_T	1.054	0.92
513_V	529_S	1.052	0.92
211_F	216_Y	1.050	0.92
486_V	582_A	1.049	0.92
85_A	88_K	1.047	0.91
620_N	665_T	1.041	0.91
82_L	86_R	1.038	0.91
242_A	254_A	1.037	0.91
422_K	448_V	1.037	0.91
307_L	340_A	1.036	0.91
387_A	395_F	1.036	0.91
595_K	692_T	1.035	0.91
61_E	110_F	1.034	0.91
268_G	272_N	1.034	0.91
87_T	91_N	1.031	0.91
82_L	85_A	1.024	0.90
557_E	601_S	1.020	0.90
602_P	605_Y	1.014	0.90
85_A	90_K	1.012	0.90
648_T	698_T	1.006	0.90
434_N	437_G	1.005	0.90
184_K	285_A	1.004	0.90
197_P	526_G	1.003	0.90
180_G	546_V	0.999	0.89
615_G	619_K	0.997	0.89
688_E	691_K	0.993	0.89
561_A	565_N	0.991	0.89
681_E	699_L	0.989	0.89
263_G	272_N	0.985	0.89
612_K	615_G	0.982	0.89
186_A	288_M	0.980	0.88
465_L	468_G	0.980	0.88
409_R	452_K	0.976	0.88
459_E	463_S	0.972	0.88
638_E	685_I	0.970	0.88
400_L	403_K	0.969	0.88
394_D	420_N	0.968	0.88
625_I	653_R	0.966	0.88
318_V	540_I	0.965	0.88
409_R	444_P	0.964	0.88
206_Y	213_D	0.963	0.88
238_A	256_L	0.963	0.88
635_Y	688_E	0.956	0.87
318_V	544_V	0.956	0.87
277_V	310_A	0.956	0.87
61_E	132_K	0.954	0.87
316_V	556_V	0.952	0.87
432_Y	458_G	0.952	0.87
137_N	140_Y	0.947	0.87
236_H	514_S	0.947	0.87
125_L	131_V	0.946	0.87
413_A	416_D	0.945	0.87
637_L	664_A	0.942	0.86
395_F	424_A	0.939	0.86
195_N	518_T	0.938	0.86
287_V	541_A	0.936	0.86
67_L	71_K	0.936	0.86
414_F	452_K	0.936	0.86
147_D	250_V	0.935	0.86
605_Y	613_E	0.933	0.86
168_I	543_A	0.930	0.86
215_D	218_P	0.930	0.86
301_W	304_S	0.929	0.86
400_L	405_A	0.927	0.86
213_D	221_T	0.925	0.85
661_T	664_A	0.922	0.85
235_T	515_T	0.914	0.85
344_G	486_V	0.910	0.84
62_L	113_F	0.908	0.84
565_N	623_F	0.906	0.84
405_A	424_A	0.905	0.84
210_D	214_N	0.904	0.84
326_P	492_R	0.901	0.84
142_T	190_T	0.900	0.84
95_K	125_L	0.896	0.84
348_L	512_I	0.895	0.83
260_R	263_G	0.895	0.83
518_T	526_G	0.892	0.83
430_V	453_L	0.890	0.83
514_S	535_M	0.889	0.83
268_G	273_V	0.889	0.83
274_I	277_V	0.889	0.83
638_E	687_R	0.889	0.83
68_A	71_K	0.889	0.83
417_K	420_N	0.886	0.83
166_P	172_D	0.886	0.83
70_A	73_A	0.884	0.83
308_D	337_S	0.882	0.83
608_G	613_E	0.882	0.83
311_M	316_V	0.881	0.82
166_P	170_A	0.879	0.82
341_I	560_K	0.873	0.82
501_I	585_A	0.871	0.82
138_V	301_W	0.869	0.82
603_G	606_S	0.869	0.82
600_V	694_A	0.868	0.82
548_K	552_P	0.866	0.81
346_T	486_V	0.864	0.81
143_D	293_G	0.864	0.81
272_N	275_A	0.864	0.81
389_I	393_K	0.861	0.81
273_V	276_G	0.861	0.81
598_S	601_S	0.858	0.81
345_A	531_Q	0.858	0.81
422_K	446_M	0.857	0.81
240_T	514_S	0.855	0.81
108_Q	282_Q	0.853	0.80
169_G	172_D	0.852	0.80
188_I	288_M	0.851	0.80
602_P	610_F	0.850	0.80
88_K	91_N	0.850	0.80
686_V	694_A	0.849	0.80
501_I	699_L	0.848	0.80
117_L	121_E	0.848	0.80
558_Q	599_L	0.846	0.80
209_Y	213_D	0.844	0.80
66_S	111_S	0.843	0.80
192_V	199_L	0.842	0.80
395_F	407_V	0.841	0.79
563_I	593_A	0.840	0.79
547_I	593_A	0.838	0.79
210_D	218_P	0.838	0.79
289_N	318_V	0.837	0.79
190_T	266_G	0.834	0.79
289_N	541_A	0.833	0.79
682_G	686_V	0.828	0.78
357_F	360_Y	0.827	0.78
176_L	595_K	0.826	0.78
118_P	121_E	0.824	0.78
117_L	125_L	0.824	0.78
632_R	657_P	0.823	0.78
562_A	566_T	0.823	0.78
600_V	686_V	0.823	0.78
324_S	491_S	0.823	0.78
602_P	608_G	0.822	0.78
632_R	658_A	0.821	0.78
419_D	422_K	0.821	0.78
434_N	455_L	0.820	0.78
579_P	582_A	0.817	0.77
269_T	272_N	0.813	0.77
83_K	86_R	0.811	0.77
603_G	608_G	0.811	0.77
207_K	216_Y	0.811	0.77
551_K	562_A	0.809	0.77
309_W	315_V	0.808	0.77
186_A	257_L	0.808	0.77
609_T	613_E	0.808	0.77
85_A	89_A	0.807	0.77
164_S	168_I	0.807	0.77
507_A	536_A	0.806	0.77
508_P	539_H	0.806	0.77
415_V	444_P	0.806	0.77
395_F	405_A	0.802	0.76
320_S	324_S	0.800	0.76
343_V	505_I	0.800	0.76
121_E	124_K	0.800	0.76
135_Y	302_A	0.800	0.76
656_I	662_G	0.799	0.76
490_S	536_A	0.797	0.76
403_K	427_I	0.797	0.76
277_V	306_A	0.795	0.76
208_G	216_Y	0.793	0.75
656_I	686_V	0.793	0.75
578_Y	583_Q	0.793	0.75
342_S	504_D	0.792	0.75
395_F	400_L	0.791	0.75
331_V	336_T	0.791	0.75
78_S	90_K	0.790	0.75
662_G	665_T	0.790	0.75
600_V	625_I	0.786	0.75
562_A	596_A	0.786	0.75
363_A	367_G	0.786	0.75
412_I	416_D	0.785	0.75
360_Y	663_K	0.785	0.75
185_V	242_A	0.783	0.74
622_T	665_T	0.782	0.74
217_D	221_T	0.782	0.74
78_S	85_A	0.780	0.74
393_K	397_G	0.779	0.74
260_R	264_P	0.775	0.74
433_N	458_G	0.775	0.74
108_Q	281_V	0.774	0.74
409_R	425_G	0.772	0.73
468_G	471_K	0.772	0.73
180_G	251_A	0.772	0.73
141_K	295_S	0.771	0.73
170_A	174_W	0.770	0.73
165_A	170_A	0.769	0.73
391_E	411_S	0.768	0.73
566_T	593_A	0.767	0.73
250_V	539_H	0.766	0.73
504_D	560_K	0.766	0.73
622_T	663_K	0.765	0.73
309_W	312_S	0.764	0.73
596_A	694_A	0.761	0.72
418_A	452_K	0.761	0.72
441_A	452_K	0.761	0.72
101_K	116_K	0.759	0.72
625_I	660_Q	0.758	0.72
71_K	74_G	0.758	0.72
256_L	276_G	0.757	0.72
285_A	339_E	0.755	0.72
237_V	536_A	0.755	0.72
169_G	589_R	0.755	0.72
69_E	72_E	0.754	0.72
320_S	451_I	0.754	0.72
173_A	591_M	0.751	0.71
634_S	653_R	0.750	0.71
240_T	530_K	0.750	0.71
462_V	466_K	0.749	0.71
414_F	429_M	0.745	0.71
306_A	310_A	0.745	0.71
208_G	258_A	0.745	0.71
192_V	256_L	0.745	0.71
512_I	539_H	0.744	0.71
184_K	255_T	0.744	0.71
376_A	384_L	0.743	0.70
402_G	502_K	0.742	0.70
495_V	517_P	0.742	0.70
131_V	648_T	0.742	0.70
627_N	633_K	0.740	0.70
91_N	95_K	0.740	0.70
465_L	469_E	0.740	0.70
607_Y	612_K	0.740	0.70
581_N	699_L	0.738	0.70
650_G	667_K	0.738	0.70
241_V	254_A	0.738	0.70
569_T	695_K	0.737	0.70
579_P	681_E	0.736	0.70
124_K	380_K	0.735	0.70
578_Y	582_A	0.734	0.70
391_E	412_I	0.733	0.69
685_I	695_K	0.732	0.69
400_L	424_A	0.731	0.69
146_K	149_D	0.731	0.69
90_K	105_E	0.730	0.69
183_I	549_Q	0.729	0.69
103_N	114_S	0.727	0.69
209_Y	221_T	0.725	0.69
188_I	277_V	0.725	0.69
206_Y	212_V	0.725	0.69
610_F	614_N	0.724	0.69
321_N	342_S	0.724	0.69
598_S	694_A	0.720	0.68
273_V	530_K	0.720	0.68
501_I	580_H	0.720	0.68
679_T	701_I	0.720	0.68
597_D	601_S	0.719	0.68
591_M	595_K	0.718	0.68
187_I	258_A	0.718	0.68
213_D	219_K	0.717	0.68
432_Y	453_L	0.717	0.68
407_V	420_N	0.716	0.68
208_G	213_D	0.716	0.68
319_T	333_S	0.714	0.67
80_S	83_K	0.714	0.67
285_A	308_D	0.713	0.67
661_T	666_A	0.711	0.67
625_I	664_A	0.710	0.67
192_V	238_A	0.710	0.67
355_V	358_G	0.710	0.67
80_S	89_A	0.706	0.67
409_R	458_G	0.704	0.66
194_Y	199_L	0.704	0.66
294_N	297_N	0.703	0.66
226_P	230_A	0.702	0.66
609_T	614_N	0.702	0.66
270_T	302_A	0.700	0.66
294_N	332_G	0.700	0.66
287_V	559_I	0.699	0.66
207_K	255_T	0.699	0.66
497_D	500_M	0.697	0.66
194_Y	228_G	0.696	0.65
118_P	122_I	0.695	0.65
637_L	686_V	0.695	0.65
86_R	107_E	0.695	0.65
57_T	137_N	0.695	0.65
250_V	542_G	0.692	0.65
61_E	309_W	0.692	0.65
421_A	425_G	0.692	0.65
414_F	418_A	0.692	0.65
213_D	218_P	0.691	0.65
650_G	665_T	0.690	0.65
216_Y	220_E	0.687	0.64
288_M	310_A	0.686	0.64
233_H	236_H	0.685	0.64
169_G	591_M	0.685	0.64
408_K	459_E	0.685	0.64
259_Y	280_A	0.683	0.64
599_L	628_Q	0.683	0.64
140_Y	268_G	0.683	0.64
394_D	398_K	0.682	0.64
206_Y	257_L	0.682	0.64
429_M	450_T	0.682	0.64
351_N	480_K	0.682	0.64
293_G	333_S	0.680	0.64
361_S	460_K	0.679	0.64
226_P	229_E	0.678	0.63
213_D	220_E	0.678	0.63
329_W	496_M	0.678	0.63
68_A	72_E	0.678	0.63
144_N	350_L	0.677	0.63
193_E	196_H	0.677	0.63
186_A	557_E	0.677	0.63
371_E	376_A	0.676	0.63
106_Y	275_A	0.676	0.63
186_A	305_T	0.675	0.63
682_G	697_P	0.674	0.63
410_G	416_D	0.673	0.63
262_L	510_V	0.671	0.63
307_L	319_T	0.671	0.63
405_A	431_V	0.670	0.63
102_V	105_E	0.670	0.63
597_D	623_F	0.670	0.63
362_S	370_K	0.666	0.62
88_K	127_A	0.666	0.62
173_A	176_L	0.665	0.62
395_F	420_N	0.665	0.62
405_A	414_F	0.664	0.62
512_I	535_M	0.664	0.62
180_G	252_P	0.663	0.62
54_K	119_A	0.663	0.62
604_S	607_Y	0.662	0.62
663_K	669_K	0.662	0.62
394_D	397_G	0.660	0.61
434_N	454_S	0.660	0.61
502_K	560_K	0.659	0.61
447_S	536_A	0.659	0.61
312_S	668_V	0.657	0.61
388_G	406_V	0.656	0.61
237_V	320_S	0.654	0.61
231_T	344_G	0.652	0.60
65_K	68_A	0.651	0.60
197_P	200_K	0.650	0.60
346_T	570_L	0.649	0.60
273_V	294_N	0.648	0.60
554_W	558_Q	0.648	0.60
174_W	179_T	0.647	0.60
164_S	539_H	0.647	0.60
211_F	214_N	0.646	0.60
341_I	564_M	0.646	0.60
321_N	331_V	0.645	0.60
198_D	247_I	0.644	0.59
504_D	564_M	0.643	0.59
359_S	365_V	0.643	0.59
198_D	245_G	0.642	0.59
168_I	250_V	0.641	0.59
194_Y	210_D	0.639	0.59
382_V	387_A	0.639	0.59
284_G	315_V	0.638	0.59
67_L	72_E	0.637	0.59
637_L	666_A	0.636	0.59
377_L	382_V	0.636	0.59
459_E	462_V	0.635	0.58
165_A	172_D	0.635	0.58
603_G	612_K	0.634	0.58
122_I	126_L	0.634	0.58
84_T	91_N	0.634	0.58
209_Y	214_N	0.633	0.58
406_V	461_L	0.632	0.58
280_A	288_M	0.631	0.58
140_Y	273_V	0.630	0.58
598_S	692_T	0.630	0.58
190_T	293_G	0.629	0.58
290_L	307_L	0.629	0.58
107_E	111_S	0.628	0.58
323_N	534_S	0.628	0.58
446_M	452_K	0.627	0.57
403_K	433_N	0.627	0.57
418_A	422_K	0.626	0.57
92_K	128_V	0.626	0.57
342_S	560_K	0.625	0.57
360_Y	363_A	0.624	0.57
535_M	538_P	0.624	0.57
347_Q	404_V	0.623	0.57
581_N	681_E	0.622	0.57
66_S	72_E	0.622	0.57
68_A	74_G	0.622	0.57
565_N	598_S	0.621	0.57
460_K	464_A	0.621	0.57
319_T	336_T	0.621	0.57
201_K	204_G	0.620	0.57
207_K	213_D	0.620	0.57
407_V	431_V	0.619	0.56
85_A	94_I	0.619	0.56
188_I	273_V	0.618	0.56
383_E	386_E	0.618	0.56
336_T	497_D	0.617	0.56
379_N	382_V	0.616	0.56
168_I	171_N	0.616	0.56
237_V	240_T	0.616	0.56
87_T	90_K	0.615	0.56
288_M	292_L	0.614	0.56
358_G	365_V	0.613	0.56
81_K	84_T	0.612	0.56
212_V	216_Y	0.612	0.56
293_G	332_G	0.611	0.56
238_A	545_A	0.611	0.56
618_T	669_K	0.611	0.56
568_V	587_S	0.610	0.55
439_I	442_N	0.610	0.55
492_R	579_P	0.610	0.55
400_L	420_N	0.610	0.55
385_V	512_I	0.610	0.55
508_P	566_T	0.609	0.55
63_K	66_S	0.609	0.55
428_G	470_T	0.608	0.55
654_V	686_V	0.608	0.55
56_T	119_A	0.607	0.55
406_V	472_T	0.607	0.55
229_E	243_A	0.606	0.55
174_W	546_V	0.606	0.55
146_K	349_P	0.604	0.55
346_T	510_V	0.604	0.55
518_T	524_P	0.604	0.55
80_S	86_R	0.603	0.55
417_K	424_A	0.603	0.55
686_V	696_V	0.602	0.54
590_I	593_A	0.602	0.54
355_V	451_I	0.601	0.54
320_S	488_D	0.600	0.54
429_M	448_V	0.600	0.54
390_G	395_F	0.600	0.54
569_T	683_T	0.600	0.54
657_P	662_G	0.598	0.54
174_W	178_Y	0.598	0.54
623_F	686_V	0.598	0.54
398_K	401_T	0.598	0.54
581_N	679_T	0.598	0.54
167_Y	174_W	0.597	0.54
64_E	81_K	0.596	0.54
183_I	548_K	0.596	0.54
383_E	387_A	0.596	0.54
539_H	543_A	0.595	0.54
593_A	627_N	0.595	0.54
355_V	363_A	0.595	0.54
103_N	121_E	0.595	0.54
262_L	292_L	0.594	0.53
580_H	583_Q	0.593	0.53
610_F	615_G	0.592	0.53
211_F	215_D	0.592	0.53
456_E	478_V	0.591	0.53
633_K	692_T	0.590	0.53
110_F	135_Y	0.590	0.53
259_Y	279_R	0.589	0.53
82_L	93_A	0.587	0.53
237_V	289_N	0.587	0.53
512_I	635_Y	0.586	0.52
392_A	398_K	0.586	0.52
122_I	131_V	0.585	0.52
278_E	282_Q	0.585	0.52
289_N	437_G	0.584	0.52
232_D	243_A	0.584	0.52
194_Y	200_K	0.584	0.52
392_A	416_D	0.583	0.52
62_L	180_G	0.583	0.52
199_L	243_A	0.583	0.52
683_T	695_K	0.582	0.52
79_K	82_L	0.582	0.52
178_Y	549_Q	0.582	0.52
603_G	610_F	0.581	0.52
418_A	444_P	0.581	0.52
268_G	345_A	0.581	0.52
210_D	219_K	0.580	0.52
649_S	652_S	0.580	0.52
605_Y	614_N	0.580	0.52
431_V	444_P	0.580	0.52
81_K	85_A	0.579	0.52
138_V	185_V	0.579	0.52
311_M	317_A	0.578	0.51
383_E	461_L	0.577	0.51
542_G	547_I	0.576	0.51
453_L	573_S	0.576	0.51
325_G	491_S	0.575	0.51
281_V	306_A	0.575	0.51
287_V	343_V	0.575	0.51
81_K	86_R	0.575	0.51
621_E	699_L	0.575	0.51
124_K	658_A	0.575	0.51
304_S	307_L	0.573	0.51
232_D	516_I	0.573	0.51
65_K	74_G	0.572	0.51
308_D	338_R	0.572	0.51
596_A	692_T	0.570	0.50
408_K	455_L	0.569	0.50
209_Y	279_R	0.569	0.50
663_K	667_K	0.569	0.50
173_A	546_V	0.569	0.50
433_N	452_K	0.568	0.50
380_K	647_S	0.568	0.50
649_S	669_K	0.567	0.50
310_A	345_A	0.567	0.50
184_K	203_F	0.566	0.50
178_Y	594_I	0.566	0.50
651_T	656_I	0.565	0.50
381_E	385_V	0.564	0.50
593_A	688_E	0.563	0.50
495_V	498_T	0.563	0.50
333_S	342_S	0.562	0.50
207_K	221_T	0.561	0.49
463_S	467_A	0.560	0.49
378_N	381_E	0.560	0.49
381_E	471_K	0.559	0.49
431_V	441_A	0.559	0.49
385_V	388_G	0.559	0.49
66_S	74_G	0.559	0.49
421_A	429_M	0.559	0.49
389_I	433_N	0.558	0.49
511_N	531_Q	0.558	0.49
353_Y	478_V	0.557	0.49
236_H	530_K	0.557	0.49
530_K	535_M	0.557	0.49
188_I	257_L	0.557	0.49
193_E	518_T	0.554	0.49
184_K	341_I	0.553	0.48
92_K	547_I	0.552	0.48
130_D	134_V	0.552	0.48
80_S	84_T	0.552	0.48
368_Y	649_S	0.552	0.48
81_K	89_A	0.551	0.48
121_E	684_V	0.551	0.48
572_D	582_A	0.551	0.48
268_G	294_N	0.550	0.48
176_L	591_M	0.550	0.48
173_A	547_I	0.550	0.48
420_N	424_A	0.550	0.48
87_T	105_E	0.549	0.48
62_L	89_A	0.549	0.48
603_G	607_Y	0.548	0.48
281_V	284_G	0.546	0.48
90_K	102_V	0.546	0.48
208_G	292_L	0.546	0.48
275_A	279_R	0.545	0.47
307_L	313_E	0.545	0.47
174_W	406_V	0.544	0.47
477_T	588_A	0.542	0.47
192_V	203_F	0.541	0.47
548_K	555_S	0.541	0.47
639_Y	678_G	0.540	0.47
358_G	464_A	0.540	0.47
287_V	309_W	0.540	0.47
474_F	547_I	0.539	0.47
525_Y	528_G	0.539	0.47
58_V	115_M	0.539	0.47
636_T	687_R	0.538	0.47
656_I	661_T	0.537	0.46
321_N	344_G	0.537	0.46
185_V	545_A	0.537	0.46
86_R	93_A	0.536	0.46
106_Y	110_F	0.536	0.46
360_Y	368_Y	0.536	0.46
190_T	235_T	0.535	0.46
242_A	258_A	0.535	0.46
173_A	652_S	0.535	0.46
655_V	658_A	0.534	0.46
341_I	556_V	0.533	0.46
498_T	610_F	0.533	0.46
233_H	323_N	0.533	0.46
355_V	365_V	0.533	0.46
397_G	400_L	0.533	0.46
72_E	81_K	0.533	0.46
565_N	600_V	0.532	0.46
640_S	683_T	0.532	0.46
298_N	304_S	0.531	0.46
198_D	515_T	0.530	0.46
414_F	426_A	0.529	0.45
67_L	78_S	0.529	0.45
338_R	555_S	0.529	0.45
97_V	102_V	0.529	0.45
629_S	633_K	0.529	0.45
631_I	652_S	0.528	0.45
654_V	684_V	0.527	0.45
400_L	427_I	0.526	0.45
393_K	420_N	0.526	0.45
464_A	467_A	0.526	0.45
67_L	82_L	0.526	0.45
507_A	512_I	0.526	0.45
516_I	536_A	0.525	0.45
231_T	269_T	0.525	0.45
682_G	698_T	0.525	0.45
431_V	452_K	0.524	0.45
440_E	488_D	0.524	0.45
59_I	110_F	0.523	0.45
409_R	437_G	0.522	0.45
54_K	126_L	0.522	0.45
208_G	212_V	0.521	0.44
410_G	450_T	0.521	0.44
314_G	556_V	0.520	0.44
186_A	259_Y	0.520	0.44
664_A	667_K	0.520	0.44
339_E	623_F	0.520	0.44
648_T	668_V	0.519	0.44
494_P	699_L	0.518	0.44
510_V	531_Q	0.518	0.44
307_L	337_S	0.518	0.44
57_T	103_N	0.517	0.44
384_L	453_L	0.517	0.44
210_D	220_E	0.517	0.44
381_E	384_L	0.517	0.44
393_K	396_E	0.517	0.44
634_S	663_K	0.516	0.44
363_A	370_K	0.516	0.44
102_V	217_D	0.516	0.44
316_V	548_K	0.516	0.44
228_G	232_D	0.515	0.44
391_E	416_D	0.515	0.44
276_G	578_Y	0.515	0.44
109_V	309_W	0.515	0.44
560_K	565_N	0.514	0.44
494_P	513_V	0.514	0.44
168_I	539_H	0.514	0.44
386_E	462_V	0.513	0.44
414_F	439_I	0.513	0.44
546_V	590_I	0.513	0.44
547_I	590_I	0.512	0.43
62_L	86_R	0.512	0.43
390_G	407_V	0.511	0.43
596_A	686_V	0.511	0.43
639_Y	648_T	0.510	0.43
235_T	264_P	0.510	0.43
168_I	588_A	0.510	0.43
324_S	537_S	0.510	0.43
465_L	471_K	0.510	0.43
250_V	627_N	0.510	0.43
81_K	91_N	0.509	0.43
184_K	201_K	0.509	0.43
394_D	412_I	0.509	0.43
409_R	431_V	0.509	0.43
641_F	644_S	0.508	0.43
611_L	699_L	0.507	0.43
412_I	417_K	0.507	0.43
216_Y	263_G	0.507	0.43
126_L	134_V	0.507	0.43
389_I	410_G	0.506	0.43
88_K	93_A	0.505	0.43
417_K	458_G	0.505	0.43
53_S	56_T	0.505	0.43
404_V	427_I	0.505	0.43
414_F	437_G	0.504	0.42
251_A	550_A	0.504	0.42
444_P	450_T	0.504	0.42
349_P	483_G	0.504	0.42
287_V	461_L	0.503	0.42
561_A	599_L	0.503	0.42
410_G	431_V	0.503	0.42
198_D	257_L	0.503	0.42
537_S	540_I	0.503	0.42
198_D	561_A	0.503	0.42
110_F	281_V	0.503	0.42
618_T	655_V	0.502	0.42
83_K	87_T	0.502	0.42
607_Y	699_L	0.502	0.42
65_K	69_E	0.501	0.42
307_L	317_A	0.501	0.42
315_V	344_G	0.500	0.42
646_I	668_V	0.500	0.42
413_A	417_K	0.500	0.42
292_L	304_S	0.500	0.42
213_D	292_L	0.500	0.42

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1xf1A	2	0.763	100	0.415	Contact Map
3i6sA	2	0.6551	100	0.489	Contact Map
3vtaA	1	0.6402	100	0.5	Contact Map
3afgA	1	0.5856	100	0.615	Contact Map
3whiA	2	0.4392	100	0.645	Contact Map
4i0wB	1	0.5186	100	0.654	Contact Map
2p4eP	2	0.6476	100	0.657	Contact Map
3wiuA	2	0.4442	100	0.661	Contact Map
3t41A	1	0.4529	100	0.662	Contact Map
1y9zA	1	0.4727	100	0.666	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0162 seconds.