DCDA - BACSU - GREMLIN Contacts

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DCDA - Diaminopimelate decarboxylase

UniProt:	P23630	Sequences: MFLHGTSRQNQHGHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNIRPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVKLDLPFKTGVKQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	439 (387)
Sequences:	8134 (4934)
Seq/√Len:	250.8

ECOLI - DCDA SPEA
BACSU - DCDA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
251_I	297_G	3.896	1.00
137_A	192_Q	3.742	1.00
151_D	200_Q	3.667	1.00
46_K	80_E	3.392	1.00
42_R	80_E	3.063	1.00
93_Y	119_M	3.060	1.00
117_L	139_L	3.032	1.00
25_L	33_L	3.020	1.00
60_Q	286_E	3.000	1.00
118_R	142_L	2.927	1.00
122_E	146_T	2.805	1.00
114_R	141_D	2.796	1.00
202_L	241_K	2.756	1.00
319_V	376_V	2.738	1.00
29_Y	414_A	2.664	1.00
45_A	82_L	2.578	1.00
149_S	200_Q	2.569	1.00
38_V	410_E	2.493	1.00
311_E	317_Q	2.458	1.00
140_E	196_S	2.444	1.00
321_V	356_I	2.404	1.00
187_E	231_E	2.399	1.00
200_Q	241_K	2.393	1.00
119_M	123_H	2.392	1.00
42_R	79_E	2.330	1.00
133_F	189_A	2.307	1.00
303_L	381_L	2.261	1.00
114_R	138_L	2.255	1.00
118_R	146_T	2.196	1.00
151_D	202_L	2.155	1.00
341_A	385_F	2.149	1.00
353_T	372_D	2.146	1.00
48_F	294_S	2.133	1.00
96_V	123_H	2.129	1.00
47_S	263_T	2.114	1.00
223_E	272_A	2.062	1.00
302_T	323_G	2.048	1.00
140_E	198_H	2.020	1.00
133_F	185_Q	2.003	1.00
317_Q	352_K	2.001	1.00
26_A	31_T	1.998	1.00
117_L	128_I	1.984	1.00
319_V	354_V	1.967	1.00
33_L	303_L	1.967	1.00
304_Y	321_V	1.929	1.00
403_R	421_E	1.918	1.00
84_L	100_F	1.911	1.00
84_L	95_A	1.907	1.00
86_V	92_L	1.905	1.00
78_E	100_F	1.887	1.00
118_R	122_E	1.831	1.00
305_T	381_L	1.806	1.00
219_V	268_K	1.796	1.00
42_R	76_L	1.769	1.00
117_L	142_L	1.750	1.00
352_K	375_E	1.744	1.00
219_V	271_E	1.742	1.00
42_R	46_K	1.741	1.00
40_L	44_R	1.721	1.00
351_D	372_D	1.716	1.00
49_K	53_I	1.712	1.00
41_I	296_V	1.712	1.00
206_C	225_I	1.691	1.00
89_G	93_Y	1.686	1.00
45_A	80_E	1.684	1.00
63_Y	67_A	1.667	1.00
45_A	77_A	1.663	1.00
44_R	298_D	1.660	1.00
121_L	142_L	1.654	1.00
67_A	296_V	1.641	1.00
121_L	150_I	1.635	1.00
97_A	424_E	1.629	1.00
301_T	383_A	1.626	1.00
58_K	286_E	1.622	1.00
77_A	295_L	1.601	1.00
134_Y	378_E	1.583	1.00
96_V	102_A	1.578	1.00
304_Y	382_L	1.549	1.00
140_E	197_E	1.546	1.00
41_I	77_A	1.535	1.00
28_K	414_A	1.533	1.00
303_L	383_A	1.526	1.00
408_F	417_V	1.526	1.00
153_L	242_V	1.522	1.00
261_H	264_E	1.508	1.00
25_L	414_A	1.502	1.00
187_E	236_Y	1.500	1.00
127_C	242_V	1.491	1.00
40_L	43_E	1.489	1.00
130_V	139_L	1.489	1.00
93_Y	97_A	1.473	1.00
101_P	104_R	1.466	1.00
44_R	47_S	1.460	1.00
65_S	84_L	1.435	1.00
46_K	50_Q	1.429	1.00
38_V	42_R	1.428	1.00
407_V	414_A	1.425	1.00
410_E	415_H	1.425	1.00
407_V	416_L	1.422	1.00
302_T	387_T	1.421	1.00
69_S	400_R	1.416	1.00
77_A	82_L	1.413	1.00
29_Y	416_L	1.411	1.00
179_F	189_A	1.402	1.00
187_E	191_E	1.389	1.00
89_G	116_E	1.389	1.00
112_K	135_E	1.376	1.00
39_A	43_E	1.367	1.00
263_T	267_E	1.367	1.00
133_F	188_R	1.364	1.00
251_I	386_C	1.362	1.00
309_Q	319_V	1.343	1.00
397_N	403_R	1.340	1.00
72_A	75_Q	1.320	1.00
233_R	239_V	1.317	1.00
29_Y	33_L	1.298	1.00
223_E	227_K	1.297	1.00
35_V	303_L	1.287	1.00
29_Y	407_V	1.284	1.00
33_L	405_A	1.283	1.00
62_A	83_S	1.268	1.00
226_F	230_D	1.267	1.00
270_I	274_K	1.262	1.00
60_Q	104_R	1.258	1.00
309_Q	378_E	1.257	1.00
93_Y	423_Y	1.255	1.00
353_T	370_D	1.254	1.00
128_I	139_L	1.253	1.00
31_T	322_D	1.249	1.00
188_R	191_E	1.246	1.00
309_Q	317_Q	1.243	1.00
219_V	272_A	1.241	1.00
181_L	231_E	1.240	1.00
111_N	320_A	1.237	1.00
33_L	407_V	1.236	1.00
120_A	128_I	1.233	1.00
229_L	243_L	1.232	1.00
185_Q	188_R	1.226	1.00
62_A	288_W	1.224	1.00
130_V	152_V	1.223	1.00
241_K	286_E	1.221	1.00
223_E	275_E	1.214	1.00
106_H	244_N	1.208	1.00
405_A	420_R	1.202	1.00
219_V	223_E	1.202	1.00
267_E	271_E	1.192	1.00
316_R	370_D	1.191	1.00
317_Q	354_V	1.188	1.00
130_V	136_I	1.186	1.00
83_S	104_R	1.181	1.00
180_D	185_Q	1.179	1.00
75_Q	79_E	1.176	1.00
114_R	142_L	1.171	1.00
304_Y	323_G	1.164	1.00
190_I	201_L	1.162	1.00
45_A	49_K	1.161	1.00
43_E	47_S	1.153	1.00
114_R	118_R	1.149	1.00
133_F	137_A	1.148	1.00
316_R	355_S	1.145	1.00
89_G	119_M	1.142	1.00
102_A	105_I	1.139	1.00
216_A	220_L	1.137	1.00
38_V	76_L	1.135	1.00
48_F	249_F	1.135	1.00
321_V	382_L	1.117	1.00
52_F	266_V	1.115	1.00
206_C	245_L	1.095	1.00
356_I	382_L	1.094	1.00
114_R	378_E	1.091	1.00
111_N	307_G	1.078	1.00
41_I	299_A	1.076	1.00
306_V	376_V	1.075	1.00
340_A	368_I	1.073	1.00
69_S	393_S	1.073	1.00
245_L	289_I	1.073	1.00
78_E	104_R	1.072	1.00
40_L	298_D	1.066	1.00
127_C	151_D	1.065	1.00
40_L	299_A	1.064	1.00
345_R	348_E	1.062	1.00
133_F	179_F	1.062	1.00
193_V	201_L	1.060	1.00
355_S	369_W	1.060	1.00
121_L	139_L	1.059	1.00
26_A	381_L	1.048	1.00
215_T	268_K	1.046	1.00
95_A	105_I	1.044	1.00
65_S	74_I	1.042	1.00
419_K	425_D	1.041	1.00
76_L	80_E	1.020	1.00
138_L	307_G	1.020	1.00
366_M	369_W	1.018	1.00
354_V	373_L	1.017	1.00
36_Y	300_G	1.011	1.00
30_G	33_L	1.007	1.00
252_R	255_E	1.006	1.00
124_R	148_H	1.005	1.00
268_K	271_E	1.002	1.00
273_V	287_I	0.998	1.00
65_S	95_A	0.996	1.00
156_I	228_K	0.986	1.00
136_I	193_V	0.985	1.00
318_Y	357_A	0.984	1.00
271_E	275_E	0.982	1.00
42_R	410_E	0.981	1.00
34_Y	395_A	0.958	1.00
102_A	125_I	0.954	1.00
137_A	141_D	0.952	1.00
355_S	366_M	0.950	1.00
298_D	386_C	0.948	1.00
44_R	294_S	0.946	1.00
68_F	406_V	0.945	1.00
93_Y	123_H	0.941	1.00
305_T	322_D	0.941	1.00
321_V	367_L	0.937	1.00
220_L	224_K	0.933	1.00
249_F	260_L	0.929	1.00
119_M	122_E	0.929	1.00
206_C	221_A	0.927	1.00
152_V	199_I	0.927	1.00
243_L	287_I	0.926	1.00
192_Q	196_S	0.925	1.00
191_E	236_Y	0.924	1.00
39_A	410_E	0.923	1.00
107_F	116_E	0.917	1.00
93_Y	424_E	0.916	1.00
326_N	360_C	0.911	1.00
121_L	128_I	0.909	1.00
309_Q	354_V	0.909	1.00
52_F	82_L	0.902	1.00
94_T	400_R	0.902	1.00
208_I	221_A	0.898	1.00
222_A	269_I	0.892	1.00
46_K	49_K	0.892	1.00
242_V	288_W	0.891	1.00
60_Q	288_W	0.886	1.00
65_S	69_S	0.884	1.00
45_A	295_L	0.882	1.00
350_H	375_E	0.880	1.00
92_L	120_A	0.880	1.00
422_T	425_D	0.878	1.00
377_K	380_D	0.877	1.00
72_A	417_V	0.876	1.00
153_L	203_G	0.875	1.00
345_R	377_K	0.874	1.00
231_E	234_D	0.873	1.00
220_L	223_E	0.871	1.00
342_A	376_V	0.871	1.00
368_I	371_I	0.870	1.00
134_Y	308_S	0.865	0.99
69_S	74_I	0.863	0.99
229_L	240_S	0.859	0.99
330_R	336_A	0.858	0.99
138_L	378_E	0.858	0.99
217_G	220_L	0.854	0.99
73_M	296_V	0.852	0.99
51_A	266_V	0.851	0.99
96_V	105_I	0.848	0.99
76_L	79_E	0.837	0.99
374_P	380_D	0.834	0.99
62_A	106_H	0.832	0.99
41_I	73_M	0.826	0.99
89_G	423_Y	0.825	0.99
47_S	51_A	0.825	0.99
27_E	305_T	0.824	0.99
230_D	276_N	0.823	0.99
358_G	365_D	0.822	0.99
204_V	225_I	0.818	0.99
419_K	422_T	0.815	0.99
306_V	319_V	0.813	0.99
351_D	375_E	0.812	0.99
328_N	331_P	0.811	0.99
143_C	150_I	0.811	0.99
66_K	361_C	0.810	0.99
71_V	97_A	0.808	0.99
275_E	279_R	0.807	0.99
74_I	100_F	0.807	0.99
330_R	334_Y	0.806	0.99
191_E	195_Q	0.806	0.99
264_E	267_E	0.804	0.99
309_Q	376_V	0.802	0.99
201_L	240_S	0.799	0.99
392_Y	404_P	0.798	0.99
242_V	286_E	0.798	0.99
128_I	150_I	0.798	0.99
304_Y	384_V	0.797	0.99
140_E	149_S	0.796	0.99
362_E	398_Y	0.794	0.99
226_F	276_N	0.792	0.99
311_E	352_K	0.790	0.99
301_T	385_F	0.790	0.99
190_I	232_W	0.789	0.99
272_A	275_E	0.788	0.99
354_V	376_V	0.788	0.99
330_R	394_M	0.787	0.99
224_K	227_K	0.787	0.99
89_G	115_E	0.787	0.99
60_Q	83_S	0.784	0.99
339_E	385_F	0.783	0.99
74_I	94_T	0.779	0.99
274_K	278_S	0.777	0.99
243_L	273_V	0.775	0.99
196_S	199_I	0.774	0.99
335_Q	338_Y	0.771	0.99
182_H	185_Q	0.771	0.99
230_D	234_D	0.769	0.99
90_G	402_P	0.769	0.99
337_K	371_I	0.767	0.99
50_Q	263_T	0.765	0.99
192_Q	195_Q	0.763	0.99
143_C	198_H	0.763	0.99
35_V	301_T	0.761	0.99
48_F	291_P	0.760	0.99
49_K	82_L	0.758	0.99
245_L	269_I	0.753	0.99
331_P	335_Q	0.747	0.98
360_C	401_I	0.746	0.98
49_K	59_A	0.745	0.98
309_Q	377_K	0.744	0.98
276_N	279_R	0.741	0.98
30_G	115_E	0.740	0.98
38_V	408_F	0.740	0.98
163_H	214_D	0.737	0.98
356_I	373_L	0.737	0.98
167_Y	335_Q	0.735	0.98
276_N	280_Y	0.735	0.98
326_N	330_R	0.735	0.98
133_F	192_Q	0.733	0.98
402_P	426_I	0.730	0.98
68_F	73_M	0.729	0.98
395_A	404_P	0.727	0.98
331_P	338_Y	0.726	0.98
219_V	275_E	0.726	0.98
47_S	50_Q	0.719	0.98
207_H	291_P	0.718	0.98
328_N	387_T	0.718	0.98
100_F	104_R	0.717	0.98
136_I	189_A	0.716	0.98
147_G	198_H	0.714	0.98
39_A	411_N	0.714	0.98
149_S	198_H	0.714	0.98
121_L	148_H	0.711	0.98
106_H	129_V	0.711	0.98
176_K	399_N	0.710	0.98
268_K	272_A	0.707	0.98
161_E	164_T	0.707	0.98
332_A	364_G	0.707	0.98
25_L	29_Y	0.702	0.98
32_P	322_D	0.701	0.98
392_Y	406_V	0.700	0.98
412_G	415_H	0.699	0.98
325_M	333_L	0.699	0.98
324_G	359_K	0.694	0.98
137_A	196_S	0.693	0.98
342_A	345_R	0.688	0.97
204_V	243_L	0.687	0.97
71_V	75_Q	0.686	0.97
216_A	219_V	0.686	0.97
57_L	270_I	0.686	0.97
329_I	391_G	0.685	0.97
127_C	202_L	0.681	0.97
64_A	67_A	0.680	0.97
226_F	277_A	0.677	0.97
151_D	241_K	0.676	0.97
75_Q	78_E	0.676	0.97
138_L	141_D	0.676	0.97
72_A	415_H	0.675	0.97
222_A	272_A	0.674	0.97
186_T	228_K	0.673	0.97
214_D	217_G	0.673	0.97
333_L	337_K	0.672	0.97
119_M	423_Y	0.671	0.97
367_L	384_V	0.668	0.97
44_R	299_A	0.668	0.97
415_H	419_K	0.667	0.97
252_R	256_D	0.667	0.97
341_A	346_I	0.665	0.97
71_V	94_T	0.663	0.97
204_V	232_W	0.663	0.97
143_C	146_T	0.663	0.97
325_M	330_R	0.663	0.97
133_F	186_T	0.661	0.97
331_P	336_A	0.659	0.97
154_L	189_A	0.659	0.97
74_I	84_L	0.657	0.97
222_A	245_L	0.657	0.97
204_V	229_L	0.656	0.97
113_S	307_G	0.656	0.97
224_K	228_K	0.655	0.97
132_N	308_S	0.654	0.97
410_E	413_E	0.653	0.96
135_E	138_L	0.651	0.96
31_T	305_T	0.650	0.96
36_Y	70_S	0.649	0.96
111_N	324_G	0.647	0.96
341_A	344_N	0.647	0.96
76_L	408_F	0.644	0.96
110_N	131_D	0.642	0.96
138_L	308_S	0.642	0.96
213_F	250_G	0.642	0.96
362_E	399_N	0.641	0.96
227_K	276_N	0.641	0.96
78_E	98_A	0.640	0.96
162_A	220_L	0.639	0.96
275_E	278_S	0.639	0.96
102_A	124_R	0.638	0.96
160_V	224_K	0.638	0.96
129_V	153_L	0.638	0.96
331_P	334_Y	0.636	0.96
61_V	82_L	0.632	0.96
305_T	379_G	0.632	0.96
325_M	332_A	0.632	0.96
333_L	336_A	0.631	0.96
392_Y	403_R	0.631	0.96
154_L	179_F	0.631	0.96
74_I	98_A	0.630	0.96
172_Q	175_S	0.629	0.96
143_C	149_S	0.626	0.96
61_V	289_I	0.625	0.96
156_I	181_L	0.625	0.96
363_S	399_N	0.624	0.95
334_Y	338_Y	0.623	0.95
232_W	238_F	0.623	0.95
179_F	186_T	0.622	0.95
77_A	84_L	0.620	0.95
107_F	120_A	0.620	0.95
73_M	417_V	0.619	0.95
351_D	374_P	0.619	0.95
96_V	119_M	0.618	0.95
124_R	151_D	0.618	0.95
421_E	425_D	0.618	0.95
139_L	150_I	0.617	0.95
272_A	276_N	0.616	0.95
334_Y	362_E	0.616	0.95
302_T	391_G	0.615	0.95
180_D	313_P	0.614	0.95
323_G	327_D	0.614	0.95
227_K	230_D	0.614	0.95
226_F	229_L	0.614	0.95
63_Y	68_F	0.613	0.95
218_F	265_Y	0.613	0.95
88_S	401_I	0.612	0.95
330_R	335_Q	0.611	0.95
113_S	116_E	0.610	0.95
321_V	324_G	0.609	0.95
142_L	146_T	0.609	0.95
75_Q	98_A	0.608	0.95
41_I	76_L	0.608	0.95
192_Q	197_E	0.607	0.95
66_K	177_F	0.606	0.95
245_L	287_I	0.603	0.95
44_R	262_A	0.602	0.95
48_F	295_L	0.601	0.94
188_R	192_Q	0.601	0.94
31_T	381_L	0.596	0.94
108_H	244_N	0.595	0.94
118_R	141_D	0.594	0.94
47_S	262_A	0.594	0.94
140_E	143_C	0.594	0.94
45_A	61_V	0.593	0.94
115_E	119_M	0.593	0.94
416_L	419_K	0.591	0.94
201_L	238_F	0.590	0.94
350_H	373_L	0.590	0.94
109_G	112_K	0.590	0.94
92_L	105_I	0.589	0.94
36_Y	406_V	0.588	0.94
323_G	326_N	0.588	0.94
188_R	195_Q	0.587	0.94
95_A	100_F	0.587	0.94
41_I	45_A	0.586	0.94
136_I	152_V	0.586	0.94
140_E	199_I	0.586	0.94
50_Q	53_I	0.585	0.94
51_A	263_T	0.584	0.94
59_A	289_I	0.584	0.94
324_G	327_D	0.583	0.94
143_C	148_H	0.583	0.94
308_S	320_A	0.582	0.93
193_V	196_S	0.582	0.93
227_K	231_E	0.582	0.93
339_E	386_C	0.581	0.93
86_V	95_A	0.578	0.93
276_N	285_P	0.575	0.93
114_R	305_T	0.574	0.93
168_I	211_Q	0.574	0.93
115_E	118_R	0.574	0.93
193_V	199_I	0.573	0.93
325_M	336_A	0.572	0.93
47_S	294_S	0.572	0.93
310_K	318_Y	0.572	0.93
233_R	285_P	0.571	0.93
255_E	339_E	0.571	0.93
260_L	264_E	0.569	0.93
361_C	399_N	0.569	0.93
339_E	343_A	0.569	0.93
226_F	272_A	0.568	0.93
52_F	289_I	0.566	0.93
181_L	186_T	0.565	0.92
130_V	154_L	0.565	0.92
43_E	46_K	0.564	0.92
154_L	193_V	0.563	0.92
330_R	333_L	0.562	0.92
143_C	147_G	0.561	0.92
43_E	50_Q	0.561	0.92
333_L	338_Y	0.560	0.92
250_G	293_R	0.559	0.92
225_I	243_L	0.559	0.92
334_Y	394_M	0.558	0.92
254_T	339_E	0.558	0.92
343_A	383_A	0.557	0.92
116_E	401_I	0.557	0.92
34_Y	387_T	0.555	0.92
61_V	295_L	0.551	0.92
136_I	199_I	0.551	0.92
115_E	305_T	0.550	0.91
325_M	328_N	0.550	0.91
216_A	268_K	0.548	0.91
34_Y	404_P	0.548	0.91
166_D	169_T	0.546	0.91
223_E	276_N	0.546	0.91
153_L	205_H	0.546	0.91
355_S	370_D	0.544	0.91
166_D	172_Q	0.543	0.91
177_F	363_S	0.543	0.91
47_S	261_H	0.541	0.91
405_A	416_L	0.540	0.91
202_L	242_V	0.538	0.91
339_E	344_N	0.537	0.90
44_R	295_L	0.536	0.90
397_N	421_E	0.536	0.90
329_I	336_A	0.536	0.90
414_A	417_V	0.536	0.90
412_G	416_L	0.533	0.90
296_V	299_A	0.532	0.90
53_I	57_L	0.532	0.90
311_E	375_E	0.531	0.90
48_F	289_I	0.531	0.90
174_D	316_R	0.530	0.90
264_E	268_K	0.527	0.90
73_M	76_L	0.526	0.90
29_Y	303_L	0.526	0.90
207_H	399_N	0.525	0.89
332_A	336_A	0.525	0.89
139_L	152_V	0.524	0.89
309_Q	375_E	0.523	0.89
308_S	378_E	0.523	0.89
229_L	285_P	0.522	0.89
362_E	394_M	0.521	0.89
416_L	420_R	0.519	0.89
346_I	349_A	0.519	0.89
134_Y	309_Q	0.518	0.89
339_E	342_A	0.518	0.89
215_T	219_V	0.517	0.89
78_E	84_L	0.516	0.89
66_K	85_D	0.516	0.89
30_G	405_A	0.516	0.89
73_M	408_F	0.513	0.88
58_K	278_S	0.513	0.88
208_I	212_I	0.512	0.88
211_Q	253_Y	0.512	0.88
326_N	329_I	0.511	0.88
116_E	359_K	0.510	0.88
85_D	399_N	0.510	0.88
140_E	192_Q	0.510	0.88
108_H	129_V	0.510	0.88
122_E	148_H	0.509	0.88
331_P	394_M	0.508	0.88
260_L	268_K	0.508	0.88
237_S	379_G	0.507	0.88
206_C	222_A	0.507	0.88
113_S	305_T	0.506	0.88
232_W	236_Y	0.505	0.88
176_K	362_E	0.505	0.88
152_V	201_L	0.504	0.88
213_F	259_P	0.504	0.88
49_K	61_V	0.503	0.87
38_V	80_E	0.502	0.87
326_N	401_I	0.500	0.87

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2o0tA	2	0.9749	100	0.248	Contact Map
1twiA	4	0.9749	100	0.255	Contact Map
2qghA	2	0.8975	100	0.258	Contact Map
2j66A	2	0.8861	100	0.266	Contact Map
3vabA	2	0.9453	100	0.267	Contact Map
1knwA	2	0.9248	100	0.268	Contact Map
3n2bA	2	0.9476	100	0.276	Contact Map
3nzpA	2	0.9567	100	0.281	Contact Map
3nzqA	2	0.9886	100	0.285	Contact Map
3n2oA	2	0.9886	100	0.306	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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