GREMLIN Database
ADDA - ATP-dependent helicase/nuclease subunit A
UniProt: P23478 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 1232 (1076)
Sequences: 2543 (2222)
Seq/√Len: 67.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
607_I788_V7.2741.00
580_I803_V5.7681.00
59_R402_H5.1521.00
622_E739_N4.9341.00
152_D355_R4.8731.00
791_M801_F4.7231.00
1064_M1175_S4.6481.00
800_E875_K4.5511.00
558_E561_K4.4741.00
581_Q786_D4.3441.00
809_L880_L4.2721.00
72_E76_R3.9791.00
1068_M1224_F3.8171.00
631_K766_E3.7291.00
359_A362_E3.7061.00
559_I585_I3.6591.00
84_E87_Q3.5851.00
199_E350_I3.5241.00
288_R291_A3.5151.00
110_H371_L3.5141.00
654_D657_E3.5111.00
306_T310_N3.5031.00
560_R564_S3.4701.00
1046_R1049_F3.3991.00
555_I807_A3.3981.00
806_V880_L3.3681.00
558_E879_F3.3481.00
571_D574_K3.2971.00
558_E805_F3.2931.00
1163_E1214_T3.2441.00
482_A486_D3.2031.00
145_V359_A3.1851.00
1119_Q1164_T3.1651.00
584_D802_P3.1641.00
56_D59_R3.1471.00
525_T528_L3.1351.00
657_E690_K3.1091.00
1125_W1163_E3.0671.00
376_L418_S3.0211.00
116_V375_C2.9801.00
360_K370_D2.9681.00
310_N314_K2.9041.00
557_K605_Q2.8251.00
116_V397_Y2.8051.00
700_K720_D2.7921.00
397_Y401_F2.7651.00
590_R866_V2.7601.00
602_L609_V2.7581.00
805_F879_F2.7551.00
556_A605_Q2.7301.00
563_I582_Y2.6581.00
1014_Q1019_I2.6461.00
526_E529_L2.6361.00
491_L871_L2.6021.00
1223_F1226_G2.5941.00
1117_G1121_I2.5751.00
404_V423_V2.5641.00
67_N110_H2.5581.00
88_R91_S2.5571.00
560_R605_Q2.5561.00
590_R863_E2.5221.00
105_S401_F2.4891.00
359_A363_K2.4531.00
561_K565_S2.4531.00
1085_T1088_R2.4521.00
629_V645_V2.4341.00
622_E736_R2.4341.00
459_K498_G2.4331.00
1086_V1090_Y2.4311.00
553_K605_Q2.4161.00
701_W720_D2.4041.00
366_I371_L2.4031.00
1162_Y1171_L2.3901.00
524_E528_L2.3751.00
302_L306_T2.3611.00
355_R358_A2.3601.00
494_Q926_R2.3581.00
124_I378_I2.3211.00
110_H369_S2.3121.00
22_T47_K2.3101.00
638_Q641_P2.2951.00
1193_L1223_F2.2761.00
793_I870_A2.2681.00
1163_E1168_L2.2271.00
894_W897_S2.2031.00
1160_C1171_L2.1981.00
806_V809_L2.1941.00
131_R137_E2.1711.00
728_G737_Q2.1711.00
602_L790_L2.1671.00
1011_R1016_V2.1481.00
110_H117_L2.1391.00
900_Q903_W2.1261.00
110_H372_E2.1211.00
1161_L1208_V2.1151.00
404_V424_T2.1061.00
153_E351_S2.1061.00
553_K601_E2.1011.00
445_R855_M2.0801.00
559_I805_F2.0771.00
1167_G1218_G2.0601.00
1096_T1099_Q2.0571.00
519_D523_T2.0551.00
522_E528_L2.0481.00
511_L514_G2.0321.00
562_L805_F2.0311.00
626_A740_L2.0241.00
80_A83_K2.0221.00
526_E530_I2.0211.00
895_Q898_A2.0201.00
219_Y223_K2.0131.00
562_L879_F2.0041.00
993_K996_E1.9791.00
894_W898_A1.9721.00
704_F716_E1.9711.00
1046_R1050_M1.9671.00
523_T528_L1.9591.00
41_V77_I1.9501.00
299_P302_L1.9201.00
1011_R1015_S1.9201.00
133_A365_I1.9101.00
24_Q470_R1.9071.00
355_R359_A1.9061.00
283_A286_F1.9041.00
704_F708_H1.9001.00
571_D578_R1.8991.00
442_S449_A1.8931.00
1097_E1101_D1.8931.00
1066_T1070_H1.8891.00
833_K848_L1.8821.00
558_E562_L1.8821.00
552_A556_A1.8681.00
901_T904_L1.8631.00
503_V506_D1.8421.00
571_D575_K1.8371.00
1164_T1217_K1.8351.00
110_H413_N1.8291.00
775_L779_R1.8171.00
595_A790_L1.8071.00
578_R584_D1.8061.00
281_V286_F1.8061.00
67_N114_L1.7951.00
89_P92_L1.7931.00
148_E355_R1.7901.00
718_Y740_L1.7901.00
525_T529_L1.7751.00
899_S904_L1.7641.00
506_D509_A1.7641.00
993_K997_Q1.7571.00
992_E996_E1.7491.00
1013_K1016_V1.7381.00
1013_K1017_S1.7351.00
256_N259_D1.7301.00
1117_G1120_L1.7211.00
580_I585_I1.7091.00
247_P250_P1.7061.00
1169_Y1218_G1.7051.00
317_E321_T1.6971.00
1206_K1210_Q1.6910.99
1222_Y1226_G1.6880.99
1164_T1167_G1.6870.99
317_E320_K1.6820.99
809_L920_I1.6810.99
299_P303_D1.6740.99
1213_K1217_K1.6730.99
487_S871_L1.6700.99
1058_A1062_T1.6680.99
1205_T1209_E1.6610.99
630_L714_I1.6590.99
1119_Q1218_G1.6590.99
395_R398_Q1.6550.99
1068_M1108_I1.6530.99
1195_K1198_E1.6480.99
48_I81_L1.6400.99
1158_I1161_L1.6160.99
513_L516_A1.6150.99
1047_P1050_M1.6140.99
899_S902_D1.6120.99
29_A439_V1.6070.99
589_L790_L1.6050.99
586_V801_F1.6040.99
78_A101_L1.5990.99
38_A42_E1.5910.99
123_L393_A1.5880.99
562_L580_I1.5870.99
582_Y608_P1.5800.99
900_Q904_L1.5780.99
310_N313_K1.5710.99
445_R858_E1.5680.99
406_V420_L1.5630.99
1082_A1105_I1.5610.99
1012_T1017_S1.5540.99
154_Y174_D1.5510.99
987_S990_F1.5500.99
1016_V1019_I1.5480.99
357_E374_Y1.5460.99
523_T526_E1.5390.99
569_V572_G1.5380.99
987_S991_D1.5340.99
281_V284_V1.5300.99
1119_Q1162_Y1.5250.99
992_E995_R1.5240.99
81_L94_I1.5230.99
117_L371_L1.5180.99
105_S115_Q1.5180.99
1011_R1014_Q1.5160.99
570_Y575_K1.5160.99
25_D461_F1.5150.99
223_K226_I1.5140.99
1162_Y1169_Y1.5080.99
513_L517_Y1.5080.99
44_M62_V1.5050.99
1011_R1017_S1.5010.99
116_V401_F1.5000.99
1015_S1020_K1.4940.99
601_E604_A1.4940.99
120_Y396_F1.4940.99
120_Y123_L1.4800.99
628_S644_S1.4800.99
237_L240_A1.4790.99
254_A258_L1.4770.99
380_T422_L1.4690.99
456_S460_R1.4650.99
380_T418_S1.4530.98
551_E881_I1.4530.98
501_G505_Y1.4460.98
358_A362_E1.4420.98
1078_S1081_E1.4400.98
314_K317_E1.4380.98
142_G182_K1.4330.98
993_K998_L1.4290.98
610_Y787_V1.4270.98
601_E605_Q1.4250.98
1088_R1092_K1.4230.98
21_S24_Q1.4200.98
145_V149_L1.4170.98
240_A249_G1.4170.98
1046_R1051_M1.4170.98
1079_I1083_E1.4150.98
781_L787_V1.4140.98
555_I805_F1.4070.98
995_R998_L1.4060.98
250_P253_R1.4060.98
1082_A1109_V1.4020.98
598_I790_L1.4010.98
351_S354_K1.3960.98
142_G186_E1.3940.98
188_S191_H1.3920.98
896_A899_S1.3920.98
256_N260_D1.3900.98
1083_E1105_I1.3870.98
806_V870_A1.3860.98
803_V879_F1.3860.98
594_W808_G1.3860.98
523_T527_L1.3790.98
58_D100_L1.3770.98
527_L531_D1.3750.98
203_H206_D1.3740.98
47_K403_E1.3730.98
110_H366_I1.3720.98
1114_T1117_G1.3700.98
632_V645_V1.3700.98
747_A761_F1.3690.98
592_M792_T1.3680.98
716_E720_D1.3680.98
148_E359_A1.3640.98
904_L908_F1.3640.98
63_V420_L1.3620.98
46_R49_T1.3510.97
514_G518_P1.3470.97
75_H79_E1.3400.97
995_R999_S1.3400.97
309_R313_K1.3390.97
1085_T1089_L1.3370.97
1013_K1155_Q1.3360.97
755_F760_R1.3360.97
146_L352_Y1.3330.97
42_E46_R1.3330.97
1007_V1015_S1.3310.97
195_E350_I1.3310.97
508_Q511_L1.3270.97
1082_A1086_V1.3250.97
750_Y760_R1.3200.97
525_T530_I1.3170.97
1171_L1222_Y1.3140.97
481_R876_E1.3130.97
853_K856_R1.3130.97
893_K898_A1.3120.97
117_L375_C1.3090.97
283_A289_A1.3080.97
193_N196_A1.3070.97
262_A266_E1.2970.97
152_D351_S1.2930.97
633_I701_W1.2920.97
1115_E1121_I1.2920.97
293_K299_P1.2920.97
1086_V1105_I1.2910.97
633_I713_L1.2890.97
113_C419_I1.2850.97
722_K725_D1.2830.97
553_K604_A1.2830.97
1120_L1160_C1.2820.97
647_R655_E1.2820.97
994_A997_Q1.2790.96
991_D995_R1.2780.96
303_D306_T1.2750.96
987_S993_K1.2730.96
142_G352_Y1.2700.96
990_F994_A1.2700.96
50_A54_P1.2700.96
724_M741_R1.2680.96
1167_G1215_K1.2660.96
1089_L1094_L1.2650.96
59_R400_Q1.2630.96
1198_E1202_Q1.2620.96
573_K576_T1.2610.96
903_W906_P1.2580.96
609_V790_L1.2570.96
1209_E1215_K1.2550.96
990_F993_K1.2530.96
63_V406_V1.2530.96
1164_T1218_G1.2520.96
308_L313_K1.2520.96
512_K515_A1.2520.96
33_G37_T1.2490.96
992_E997_Q1.2490.96
1108_I1117_G1.2490.96
1168_L1212_A1.2480.96
757_G763_R1.2450.96
144_E359_A1.2440.96
899_S903_W1.2430.96
989_A994_A1.2420.96
110_H367_D1.2420.96
30_A33_G1.2390.96
261_L268_I1.2330.96
783_E787_V1.2320.96
312_A315_L1.2320.96
625_V648_S1.2280.96
898_A905_L1.2280.96
526_E558_E1.2280.96
573_K577_H1.2240.95
1067_V1103_I1.2220.95
1201_I1221_L1.2200.95
1014_Q1017_S1.2190.95
33_G36_K1.2190.95
775_L778_A1.2190.95
44_M57_V1.2150.95
42_E80_A1.2120.95
733_G736_R1.2120.95
1118_G1121_I1.2100.95
61_L68_A1.2100.95
524_E530_I1.2100.95
244_T249_G1.2080.95
758_L761_F1.2070.95
697_H701_W1.2040.95
1083_E1087_H1.2040.95
632_V698_L1.2020.95
1132_F1207_A1.2000.95
1169_Y1220_A1.2000.95
528_L531_D1.1990.95
1134_L1154_V1.1970.95
916_Y920_I1.1970.95
1166_D1217_K1.1960.95
253_R256_N1.1960.95
356_F367_D1.1930.95
114_L118_K1.1880.95
372_E415_V1.1880.95
344_T347_Q1.1870.95
59_R399_E1.1850.95
992_E998_L1.1850.95
30_A37_T1.1840.95
782_S787_V1.1840.95
184_V349_V1.1830.95
402_H425_S1.1830.95
1214_T1217_K1.1780.94
519_D522_E1.1780.94
372_E413_N1.1750.94
273_D276_E1.1750.94
871_L924_L1.1730.94
319_L324_F1.1720.94
507_E510_E1.1710.94
1170_L1208_V1.1710.94
120_Y397_Y1.1700.94
814_N817_D1.1660.94
295_D299_P1.1650.94
63_V67_N1.1640.94
570_Y577_H1.1640.94
275_S278_Y1.1630.94
30_A35_G1.1550.94
30_A36_K1.1550.94
1072_P1075_H1.1550.94
220_Q224_E1.1540.94
110_H419_I1.1540.94
32_A37_T1.1500.94
599_M790_L1.1480.94
522_E526_E1.1480.94
1084_Q1088_R1.1480.94
107_S110_H1.1480.94
659_S663_L1.1470.94
802_P875_K1.1460.94
339_K343_E1.1460.94
1162_Y1166_D1.1460.94
627_L631_K1.1430.93
1176_D1197_Y1.1430.93
569_V574_K1.1430.93
1079_I1086_V1.1430.93
897_S901_T1.1420.93
825_D858_E1.1420.93
1086_V1100_K1.1410.93
1015_S1019_I1.1400.93
1001_T1005_Q1.1390.93
32_A35_G1.1370.93
32_A36_K1.1370.93
27_L68_A1.1330.93
783_E789_R1.1300.93
226_I230_L1.1290.93
1213_K1216_V1.1290.93
578_R802_P1.1290.93
1106_E1110_Q1.1260.93
1108_I1112_F1.1240.93
1136_L1206_K1.1240.93
439_V454_F1.1220.93
893_K896_A1.1220.93
234_K238_L1.1200.93
954_I959_L1.1200.93
1119_Q1169_Y1.1200.93
45_I80_A1.1190.93
510_E513_L1.1180.93
316_L322_D1.1150.93
44_M77_I1.1150.93
657_E660_L1.1140.93
1163_E1166_D1.1140.93
234_K265_D1.1130.93
906_P909_D1.1120.93
570_Y574_K1.1110.93
1106_E1109_V1.1090.92
832_T835_I1.1080.92
587_I1119_Q1.1070.92
882_G1154_V1.1070.92
238_L265_D1.1040.92
249_G253_R1.1030.92
286_F289_A1.1030.92
357_E361_Q1.0970.92
651_V697_H1.0950.92
1197_Y1223_F1.0910.92
403_E432_N1.0890.92
1130_I1161_L1.0890.92
635_N638_Q1.0880.92
793_I809_L1.0870.92
1209_E1216_V1.0860.92
724_M728_G1.0850.92
315_L318_K1.0850.92
609_V613_L1.0820.91
724_M737_Q1.0820.91
514_G517_Y1.0810.91
73_M420_L1.0810.91
805_F877_K1.0800.91
377_A1165_E1.0770.91
1060_K1064_M1.0760.91
31_A34_S1.0750.91
600_E604_A1.0730.91
81_L98_L1.0720.91
1084_Q1087_H1.0710.91
62_V81_L1.0710.91
646_L651_V1.0690.91
900_Q906_P1.0690.91
587_I602_L1.0690.91
691_L695_Y1.0670.91
626_A714_I1.0670.91
988_F992_E1.0660.91
1116_I1119_Q1.0640.91
511_L516_A1.0630.91
391_S394_A1.0630.91
304_E308_L1.0600.91
1111_F1114_T1.0600.91
302_L305_A1.0600.91
141_I363_K1.0590.91
1134_L1207_A1.0570.91
314_K318_K1.0570.91
263_Q267_L1.0570.91
1087_H1091_E1.0570.91
298_D301_L1.0560.90
723_Y727_V1.0550.90
713_L717_V1.0550.90
1112_F1115_E1.0540.90
308_L312_A1.0540.90
238_L242_E1.0530.90
221_Y224_E1.0520.90
110_H412_T1.0500.90
493_K510_E1.0500.90
498_G504_D1.0500.90
634_D762_L1.0480.90
187_Y824_L1.0480.90
629_V650_I1.0470.90
756_R760_R1.0470.90
64_T69_S1.0460.90
281_V289_A1.0450.90
487_S525_T1.0440.90
901_T906_P1.0440.90
757_G760_R1.0440.90
130_F366_I1.0420.90
589_L807_A1.0420.90
219_Y222_V1.0390.90
612_N795_S1.0360.90
153_E347_Q1.0360.90
63_V109_L1.0350.90
1011_R1021_R1.0340.90
809_L881_I1.0340.90
1011_R1019_I1.0330.89
457_K461_F1.0320.89
300_A303_D1.0320.89
709_S712_E1.0310.89
305_A308_L1.0270.89
1047_P1051_M1.0250.89
589_L598_I1.0250.89
244_T247_P1.0240.89
630_L743_L1.0230.89
366_I374_Y1.0220.89
855_M859_L1.0170.89
141_I360_K1.0140.89
903_W907_E1.0130.89
1015_S1021_R1.0110.88
512_K516_A1.0090.88
318_K322_D1.0080.88
1072_P1128_R1.0070.88
629_V698_L1.0050.88
484_I874_A1.0030.88
1190_A1193_L1.0010.88
1115_E1118_G1.0000.88
1192_I1195_K0.9980.88
134_D137_E0.9980.88
96_R100_L0.9960.88
1189_A1192_I0.9950.88
360_K367_D0.9950.88
248_G252_P0.9920.87
902_D906_P0.9900.87
759_F762_L0.9880.87
113_C865_R0.9880.87
1073_L1126_K0.9870.87
1068_M1111_F0.9840.87
563_I580_I0.9830.87
34_S413_N0.9820.87
750_Y761_F0.9820.87
44_M807_A0.9820.87
629_V717_V0.9790.87
1191_P1195_K0.9780.87
149_L351_S0.9780.87
282_P286_F0.9780.87
462_T469_G0.9770.87
529_L532_N0.9760.87
316_L319_L0.9760.87
225_D229_V0.9760.87
524_E529_L0.9760.87
921_G925_A0.9740.87
142_G356_F0.9730.86
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587_I665_N0.6270.55
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304_E307_D0.6190.54
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786_D1171_L0.6050.52
482_A816_M0.6050.52
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617_Y739_N0.6050.52
48_I1169_Y0.6040.52
33_G66_T0.6040.52
142_G145_V0.6040.52
67_N107_S0.6030.52
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625_V723_Y0.6030.52
509_A514_G0.6030.52
206_D581_Q0.6030.52
738_A742_V0.6030.52
230_L240_A0.6020.52
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633_I717_V0.6020.52
922_P930_L0.6010.52
569_V575_K0.6010.52
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627_L765_I0.6010.52
121_Y124_I0.6000.52
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447_R489_N0.6000.52
1159_D1174_K0.6000.52
450_E742_V0.6000.52
252_P255_D0.6000.52
1012_T1018_E0.6000.52
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821_S824_L0.5990.52
315_L325_T0.5990.52
896_A904_L0.5990.52
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1010_I1013_K0.5980.52
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380_T391_S0.5960.51
774_D779_R0.5960.51
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237_L245_K0.5430.45
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555_I748_R0.5420.45
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305_A310_N0.5400.45
34_S1206_K0.5400.45
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563_I581_Q0.5390.45
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1119_Q1217_K0.5390.45
951_V1087_H0.5390.45
908_F920_I0.5390.45
711_S748_R0.5390.45
66_T76_R0.5390.45
757_G769_Q0.5390.45
1221_L1228_H0.5380.44
1221_L1225_D0.5370.44
998_L1016_V0.5360.44
30_A64_T0.5350.44
363_K721_T0.5350.44
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196_A200_S0.5320.44
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1073_L1160_C0.5310.44
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871_L921_G0.5310.44
485_L875_K0.5310.44
1205_T1226_G0.5300.44
370_D584_D0.5300.44
715_W728_G0.5300.44
1075_H1088_R0.5290.43
529_L533_A0.5290.43
97_Q104_A0.5290.43
111_S778_A0.5290.43
264_I269_Q0.5290.43
483_D486_D0.5280.43
1063_A1103_I0.5280.43
887_H890_Q0.5270.43
286_F291_A0.5270.43
955_H958_D0.5260.43
235_E238_L0.5260.43
203_H689_Q0.5260.43
487_S781_L0.5260.43
35_G66_T0.5260.43
36_K66_T0.5260.43
625_V628_S0.5260.43
39_V474_L0.5250.43
1137_P1151_P0.5250.43
1021_R1024_E0.5250.43
1110_Q1114_T0.5250.43
747_A757_G0.5250.43
146_L178_Q0.5240.43
230_L233_A0.5240.43
62_V409_Y0.5230.43
55_I402_H0.5230.43
59_R563_I0.5230.43
599_M603_R0.5230.43
627_L762_L0.5230.43
49_T84_E0.5230.43
179_F183_Q0.5220.43
1091_E1108_I0.5220.43
222_V343_E0.5220.43
627_L766_E0.5220.43
413_N442_S0.5210.42
396_F399_E0.5210.42
82_E98_L0.5200.42
48_I55_I0.5200.42
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1167_G1216_V0.5190.42
68_A609_V0.5190.42
994_A1001_T0.5190.42
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275_S282_P0.5180.42
626_A718_Y0.5180.42
1129_E1204_Y0.5180.42
1056_T1179_E0.5180.42
1114_T1121_I0.5180.42
221_Y225_D0.5180.42
394_A1223_F0.5170.42
184_V478_F0.5170.42
352_Y1173_Y0.5170.42
782_S796_S0.5170.42
274_F283_A0.5170.42
417_E457_K0.5170.42
109_L879_F0.5160.42
985_P988_F0.5160.42
861_S864_L0.5160.42
176_D180_L0.5160.42
400_Q1210_Q0.5160.42
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345_L639_D0.5150.42
871_L1222_Y0.5150.42
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132_I745_D0.5150.42
31_A800_E0.5140.42
401_F1057_A0.5140.42
1082_A1108_I0.5140.42
112_F801_F0.5140.42
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1061_G1174_K0.5130.42
117_L366_I0.5130.42
146_L150_F0.5130.42
988_F994_A0.5130.42
311_G320_K0.5120.41
378_I735_Q0.5120.41
1110_Q1227_G0.5120.41
925_A930_L0.5120.41
312_A323_Y0.5110.41
44_M68_A0.5110.41
793_I1201_I0.5110.41
1159_D1172_D0.5110.41
1054_G1060_K0.5110.41
373_H376_L0.5110.41
369_S413_N0.5110.41
583_R782_S0.5110.41
1110_Q1120_L0.5100.41
159_K956_S0.5100.41
434_F648_S0.5100.41
260_D264_I0.5100.41
48_I57_V0.5090.41
363_K394_A0.5090.41
1086_V1195_K0.5090.41
482_A513_L0.5090.41
32_A66_T0.5090.41
995_R1000_W0.5090.41
223_K275_S0.5090.41
260_D286_F0.5090.41
950_A953_M0.5080.41
994_A999_S0.5080.41
424_T454_F0.5080.41
515_A521_D0.5080.41
44_M378_I0.5080.41
1213_K1220_A0.5080.41
110_H414_L0.5080.41
28_V1069_Q0.5080.41
32_A69_S0.5070.41
62_V435_M0.5070.41
413_N556_A0.5060.41
601_E646_L0.5060.41
901_T909_D0.5060.41
29_A413_N0.5050.41
813_F863_E0.5050.41
34_S454_F0.5050.41
94_I97_Q0.5050.41
511_L517_Y0.5050.41
238_L257_F0.5050.41
48_I123_L0.5050.41
1021_R1025_Y0.5050.41
90_G959_L0.5040.41
128_P135_Q0.5040.41
39_V478_F0.5040.41
450_E826_K0.5040.41
626_A630_L0.5030.40
147_D178_Q0.5030.40
449_A636_P0.5030.40
477_N1173_Y0.5030.40
42_E118_K0.5030.40
1089_L1093_E0.5020.40
275_S279_K0.5020.40
1009_Q1017_S0.5020.40
265_D268_I0.5010.40
110_H356_F0.5010.40
698_L878_L0.5010.40
927_H949_F0.5010.40
39_V472_I0.5000.40
880_L1203_L0.5000.40
439_V780_A0.5000.40
29_A105_S0.5000.40
1061_G1204_Y0.5000.40
280_R285_S0.5000.40
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1w36B 1 0.8588 100 0.335 Contact Map
1pjrA 1 0.5 100 0.559 Contact Map
4c2tA 1 0.5244 100 0.561 Contact Map
1uaaA 2 0.5073 100 0.579 Contact Map
3lfuA 1 0.5081 100 0.588 Contact Map
4c2uA 1 0.526 100 0.59 Contact Map
3u4qB 1 0.7354 100 0.62 Contact Map
4pj3A 1 0.4635 100 0.749 Contact Map
2xzlA 1 0.3628 100 0.801 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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