PPB3 - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

PPB3 - Alkaline phosphatase 3

UniProt:	P19405	Sequences: MKKFPKKLLPIAVLSSIAFSSLASGSVPEASAQEKKKGNQDEIKNVIVLIGDGMGVSYTSAYRYLKDNKKTKVVEPTAFDQYLVGQQTTYPDDPEQNVTDSAAAATAMSAGIKTYNNAIAVDNDGSEAKTVLEAAKEKGKATGLVATSEITHATPASFGSHDHSRKNMNSIADDYFDEMVNGKHKIDVLLGGGKSNFDRKDRNLIKEFKKAGYSYVDDRKDMLKNKDSQVLGLFADGGLPKKIDRTKDIPSLKDMTNTAIKKLNKDKDGFFLMVEGSQIDWAGHDNDIVGAMSEMEDFEQAYKAAIDFAKKDKHTLVVATADHSTGGYSIGADGIYNWFSEPIKAAKRTPDFMAEKIADGADVEKTLKTYIDQKKLALTKAEIQSVEEAAKSKEVLDIDNAIENIFNKRSHTGWTTGGHTGEDVPVYAYGPSSETFAGQIDNTEIAKNVFKALQYNIKINDK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	462 (407)
Sequences:	1915 (1314)
Seq/√Len:	65.1

ECOLI - PPB
BACSU - PPB3 PPB4
HALSA - Q9HHP0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
202_R	207_E	5.234	1.00
218_D	221_D	4.251	1.00
203_N	206_K	4.169	1.00
240_P	249_I	3.980	1.00
303_K	307_D	3.522	1.00
141_A	266_D	3.394	1.00
219_R	223_L	3.325	1.00
257_N	304_A	3.266	1.00
219_R	254_D	3.229	1.00
278_Q	281_W	3.198	1.00
129_K	137_E	3.051	1.00
151_T	168_M	2.913	1.00
91_P	103_A	2.767	1.00
136_K	187_D	2.747	1.00
99_T	104_A	2.735	1.00
149_E	168_M	2.732	1.00
132_L	271_F	2.636	1.00
150_I	189_L	2.559	1.00
148_S	277_S	2.541	1.00
205_I	215_Y	2.496	1.00
258_T	261_K	2.469	1.00
159_G	175_Y	2.448	1.00
258_T	262_K	2.433	1.00
146_A	277_S	2.405	1.00
253_K	297_D	2.403	1.00
253_K	304_A	2.385	1.00
298_F	302_Y	2.380	1.00
87_Q	426_V	2.376	1.00
154_T	273_M	2.354	1.00
190_L	232_G	2.318	1.00
253_K	300_Q	2.306	1.00
276_G	298_F	2.306	1.00
190_L	230_V	2.298	1.00
301_A	305_A	2.273	1.00
79_F	299_E	2.272	1.00
51_G	279_I	2.250	1.00
242_K	297_D	2.144	1.00
194_K	215_Y	2.079	1.00
105_A	157_S	2.043	1.00
62_Y	296_E	2.042	1.00
57_S	422_E	2.008	1.00
130_T	133_E	1.952	1.00
78_A	303_K	1.931	1.00
245_R	251_S	1.900	1.00
297_D	300_Q	1.898	1.00
242_K	251_S	1.882	1.00
132_L	142_T	1.874	1.00
55_G	324_S	1.874	1.00
59_T	427_Y	1.872	1.00
169_N	196_N	1.837	1.00
118_A	121_V	1.791	1.00
261_K	308_F	1.775	1.00
78_A	299_E	1.774	1.00
50_I	108_M	1.767	1.00
62_Y	295_M	1.744	1.00
318_V	436_F	1.717	0.99
85_G	440_I	1.710	0.99
114_T	118_A	1.696	0.99
260_I	305_A	1.679	0.99
85_G	426_V	1.668	0.99
49_L	305_A	1.667	0.99
55_G	321_A	1.667	0.99
162_D	174_D	1.661	0.99
304_A	307_D	1.646	0.99
256_T	305_A	1.645	0.99
119_I	156_A	1.631	0.99
110_A	120_A	1.628	0.99
131_V	449_V	1.619	0.99
244_D	290_G	1.609	0.99
120_A	157_S	1.596	0.99
49_L	298_F	1.596	0.99
259_A	272_L	1.587	0.99
134_A	446_A	1.577	0.99
115_Y	118_A	1.559	0.99
91_P	116_N	1.553	0.99
287_D	290_G	1.532	0.99
87_Q	445_I	1.531	0.99
140_K	453_L	1.515	0.99
47_I	305_A	1.513	0.99
253_K	301_A	1.483	0.98
133_E	161_H	1.473	0.98
46_V	453_L	1.473	0.98
241_K	278_Q	1.467	0.98
256_T	274_V	1.465	0.98
144_L	158_F	1.461	0.98
131_V	446_A	1.458	0.98
92_D	115_Y	1.457	0.98
242_K	245_R	1.456	0.98
324_S	422_E	1.452	0.98
309_A	317_V	1.452	0.98
58_Y	283_G	1.452	0.98
43_I	452_A	1.421	0.98
444_E	447_K	1.417	0.98
168_M	238_G	1.412	0.98
294_E	297_D	1.411	0.98
230_V	262_K	1.408	0.98
110_A	128_A	1.407	0.98
56_V	425_P	1.401	0.98
149_E	238_G	1.392	0.98
135_A	453_L	1.387	0.98
99_T	103_A	1.381	0.98
195_S	198_D	1.381	0.98
149_E	237_G	1.379	0.97
206_K	209_K	1.378	0.97
87_Q	440_I	1.375	0.97
310_K	313_K	1.375	0.97
176_F	208_F	1.372	0.97
426_V	440_I	1.371	0.97
283_G	291_A	1.370	0.97
120_A	130_T	1.352	0.97
152_H	238_G	1.352	0.97
257_N	261_K	1.350	0.97
195_S	237_G	1.348	0.97
49_L	276_G	1.345	0.97
105_A	109_S	1.330	0.97
62_Y	77_T	1.329	0.97
49_L	317_V	1.319	0.97
190_L	234_F	1.317	0.97
213_Y	229_Q	1.310	0.97
144_L	159_G	1.307	0.97
148_S	281_W	1.306	0.97
63_R	423_D	1.306	0.97
85_G	437_A	1.305	0.96
92_D	123_N	1.303	0.96
309_A	429_Y	1.303	0.96
435_T	451_K	1.300	0.96
235_A	249_I	1.285	0.96
309_A	315_T	1.285	0.96
50_I	154_T	1.282	0.96
91_P	99_T	1.282	0.96
55_G	422_E	1.282	0.96
436_F	448_N	1.280	0.96
96_Q	116_N	1.277	0.96
63_R	80_D	1.276	0.96
88_T	441_D	1.275	0.96
109_S	158_F	1.272	0.96
143_G	272_L	1.271	0.96
241_K	285_D	1.252	0.96
318_V	449_V	1.251	0.96
306_I	429_Y	1.235	0.95
66_K	299_E	1.234	0.95
426_V	445_I	1.232	0.95
336_Y	343_I	1.203	0.94
152_H	281_W	1.203	0.94
120_A	128_A	1.200	0.94
301_A	304_A	1.199	0.94
108_M	445_I	1.195	0.94
305_A	309_A	1.190	0.94
187_D	229_Q	1.189	0.94
88_T	439_Q	1.184	0.94
54_M	59_T	1.176	0.94
232_G	255_M	1.169	0.94
119_I	162_D	1.166	0.93
298_F	319_A	1.162	0.93
276_G	301_A	1.157	0.93
238_G	281_W	1.151	0.93
66_K	296_E	1.146	0.93
228_S	265_K	1.142	0.93
238_G	278_Q	1.139	0.93
329_S	332_A	1.135	0.93
382_E	389_A	1.132	0.92
99_T	442_N	1.131	0.92
149_E	152_H	1.131	0.92
90_Y	441_D	1.130	0.92
382_E	385_S	1.127	0.92
48_V	271_F	1.126	0.92
279_I	295_M	1.122	0.92
235_A	240_P	1.117	0.92
132_L	186_I	1.109	0.92
151_T	197_F	1.108	0.92
208_F	231_L	1.108	0.92
51_G	320_T	1.105	0.92
47_I	309_A	1.102	0.91
73_V	76_P	1.098	0.91
177_D	202_R	1.097	0.91
332_A	336_Y	1.086	0.91
136_K	142_T	1.086	0.91
151_T	238_G	1.080	0.91
132_L	158_F	1.080	0.91
109_S	120_A	1.076	0.90
217_D	221_D	1.075	0.90
444_E	448_N	1.073	0.90
188_V	259_A	1.072	0.90
99_T	116_N	1.062	0.90
427_Y	439_Q	1.061	0.90
377_A	381_A	1.052	0.89
152_H	168_M	1.050	0.89
82_Y	429_Y	1.049	0.89
223_L	258_T	1.049	0.89
103_A	116_N	1.048	0.89
122_D	126_S	1.047	0.89
252_L	297_D	1.046	0.89
377_A	382_E	1.042	0.89
145_V	259_A	1.042	0.89
276_G	305_A	1.039	0.89
385_S	388_E	1.035	0.89
340_S	343_I	1.033	0.89
336_Y	339_F	1.031	0.88
277_S	281_W	1.030	0.88
135_A	455_Y	1.026	0.88
243_I	349_T	1.024	0.88
222_M	258_T	1.024	0.88
234_F	255_M	1.017	0.88
194_K	217_D	1.015	0.88
306_I	317_V	1.012	0.87
239_L	249_I	1.011	0.87
83_L	433_S	1.006	0.87
190_L	216_V	1.005	0.87
206_K	210_K	0.998	0.87
49_L	302_Y	0.991	0.86
446_A	450_F	0.989	0.86
108_M	273_M	0.982	0.86
239_L	255_M	0.976	0.86
82_Y	306_I	0.976	0.86
215_Y	233_L	0.975	0.85
115_Y	123_N	0.966	0.85
46_V	449_V	0.965	0.85
329_S	336_Y	0.965	0.85
324_S	420_T	0.960	0.85
304_A	308_F	0.958	0.84
134_A	450_F	0.946	0.84
440_I	444_E	0.943	0.83
60_S	64_Y	0.940	0.83
78_A	306_I	0.939	0.83
227_D	262_K	0.936	0.83
241_K	282_A	0.935	0.83
135_A	142_T	0.931	0.83
145_V	188_V	0.930	0.83
160_S	171_I	0.919	0.82
243_I	289_V	0.916	0.82
128_A	161_H	0.916	0.82
195_S	236_D	0.916	0.82
336_Y	340_S	0.912	0.81
297_D	301_A	0.911	0.81
86_Q	425_P	0.909	0.81
309_A	313_K	0.909	0.81
256_T	260_I	0.903	0.81
151_T	196_N	0.901	0.81
190_L	222_M	0.901	0.81
188_V	230_V	0.900	0.81
141_A	268_D	0.900	0.81
260_I	308_F	0.900	0.81
78_A	81_Q	0.898	0.80
69_K	293_S	0.897	0.80
253_K	257_N	0.894	0.80
243_I	290_G	0.893	0.80
129_K	134_A	0.890	0.80
151_T	172_A	0.889	0.80
67_D	75_E	0.889	0.80
286_N	326_G	0.887	0.80
104_A	442_N	0.886	0.79
133_E	137_E	0.885	0.79
48_V	318_V	0.884	0.79
382_E	409_R	0.879	0.79
305_A	317_V	0.879	0.79
167_N	170_S	0.877	0.79
144_L	271_F	0.876	0.79
168_M	237_G	0.875	0.79
51_G	54_M	0.872	0.78
205_I	217_D	0.872	0.78
160_S	175_Y	0.872	0.78
98_V	331_G	0.870	0.78
241_K	281_W	0.869	0.78
54_M	295_M	0.864	0.78
65_L	296_E	0.863	0.78
130_T	161_H	0.856	0.77
83_L	437_A	0.855	0.77
311_K	314_H	0.855	0.77
141_A	187_D	0.853	0.77
317_V	429_Y	0.847	0.76
310_K	314_H	0.843	0.76
54_M	279_I	0.842	0.76
363_V	366_T	0.841	0.76
296_E	299_E	0.840	0.76
274_V	301_A	0.837	0.75
328_Y	336_Y	0.833	0.75
244_D	294_E	0.831	0.75
59_T	425_P	0.830	0.75
136_K	185_K	0.829	0.75
222_M	232_G	0.829	0.75
194_K	236_D	0.828	0.75
152_H	166_K	0.827	0.75
282_A	290_G	0.825	0.74
48_V	320_T	0.820	0.74
117_N	164_S	0.818	0.74
379_T	382_E	0.818	0.74
140_K	269_G	0.817	0.74
106_T	114_T	0.816	0.74
310_K	429_Y	0.814	0.73
383_I	386_V	0.813	0.73
223_L	254_D	0.812	0.73
175_Y	208_F	0.810	0.73
173_D	204_L	0.809	0.73
366_T	370_Y	0.804	0.73
79_F	427_Y	0.801	0.72
377_A	385_S	0.801	0.72
143_G	188_V	0.800	0.72
190_L	255_M	0.799	0.72
199_R	203_N	0.798	0.72
403_E	407_N	0.795	0.72
84_V	428_A	0.792	0.71
289_V	404_N	0.789	0.71
326_G	414_W	0.786	0.71
55_G	328_Y	0.784	0.71
282_A	287_D	0.783	0.71
216_V	230_V	0.781	0.70
136_K	184_H	0.780	0.70
49_L	140_K	0.778	0.70
384_Q	445_I	0.778	0.70
143_G	269_G	0.777	0.70
49_L	274_V	0.776	0.70
102_A	119_I	0.773	0.70
55_G	91_P	0.771	0.69
61_A	292_M	0.771	0.69
54_M	320_T	0.769	0.69
227_D	230_V	0.769	0.69
56_V	86_Q	0.766	0.69
188_V	228_S	0.764	0.69
316_L	436_F	0.763	0.69
299_E	303_K	0.763	0.69
109_S	273_M	0.762	0.68
141_A	265_K	0.758	0.68
383_I	387_E	0.757	0.68
384_Q	388_E	0.756	0.68
48_V	108_M	0.756	0.68
77_T	299_E	0.756	0.68
289_V	293_S	0.756	0.68
276_G	279_I	0.755	0.68
300_Q	303_K	0.754	0.68
159_G	176_F	0.753	0.67
264_N	308_F	0.751	0.67
198_D	201_D	0.749	0.67
105_A	158_F	0.749	0.67
113_K	441_D	0.749	0.67
430_G	433_S	0.749	0.67
51_G	321_A	0.748	0.67
68_N	71_T	0.747	0.67
296_E	300_Q	0.745	0.67
302_Y	319_A	0.745	0.67
205_I	231_L	0.744	0.67
119_I	157_S	0.744	0.67
385_S	389_A	0.743	0.66
149_E	278_Q	0.740	0.66
341_E	367_L	0.740	0.66
139_G	268_D	0.739	0.66
215_Y	254_D	0.736	0.66
346_A	349_T	0.736	0.66
144_L	186_I	0.736	0.66
316_L	433_S	0.734	0.66
285_D	416_T	0.733	0.65
372_D	417_G	0.732	0.65
135_A	140_K	0.731	0.65
377_A	380_K	0.729	0.65
173_D	177_D	0.729	0.65
93_D	115_Y	0.726	0.65
216_V	222_M	0.726	0.65
87_Q	318_V	0.723	0.64
162_D	167_N	0.722	0.64
222_M	248_D	0.720	0.64
65_L	293_S	0.720	0.64
204_L	207_E	0.720	0.64
350_P	354_A	0.719	0.64
170_S	173_D	0.719	0.64
44_K	314_H	0.718	0.64
267_K	313_K	0.718	0.64
440_I	448_N	0.713	0.63
307_D	310_K	0.713	0.63
58_Y	324_S	0.711	0.63
162_D	170_S	0.711	0.63
89_T	424_V	0.708	0.63
112_I	128_A	0.707	0.63
341_E	344_K	0.707	0.63
386_V	389_A	0.704	0.62
108_M	154_T	0.702	0.62
445_I	449_V	0.701	0.62
209_K	215_Y	0.700	0.62
428_A	436_F	0.699	0.62
50_I	273_M	0.694	0.61
51_G	319_A	0.691	0.61
43_I	140_K	0.690	0.61
318_V	446_A	0.690	0.61
320_T	426_V	0.688	0.61
108_M	446_A	0.687	0.60
48_V	158_F	0.687	0.60
127_E	161_H	0.687	0.60
104_A	108_M	0.687	0.60
320_T	424_V	0.685	0.60
93_D	96_Q	0.685	0.60
222_M	249_I	0.685	0.60
372_D	418_G	0.684	0.60
337_N	344_K	0.684	0.60
220_K	223_L	0.683	0.60
251_S	282_A	0.681	0.60
65_L	289_V	0.679	0.59
207_E	210_K	0.678	0.59
383_I	388_E	0.678	0.59
340_S	345_A	0.674	0.59
209_K	212_G	0.674	0.59
56_V	422_E	0.672	0.59
244_D	287_D	0.672	0.59
359_D	362_D	0.672	0.59
107_A	113_K	0.671	0.59
147_T	255_M	0.669	0.58
257_N	308_F	0.666	0.58
365_K	369_T	0.666	0.58
437_A	440_I	0.666	0.58
173_D	202_R	0.665	0.58
50_I	158_F	0.659	0.57
49_L	319_A	0.658	0.57
190_L	272_L	0.657	0.57
77_T	296_E	0.655	0.57
147_T	239_L	0.654	0.57
339_F	344_K	0.653	0.57
366_T	372_D	0.651	0.56
220_K	248_D	0.650	0.56
216_V	221_D	0.650	0.56
176_F	207_E	0.649	0.56
60_S	423_D	0.649	0.56
311_K	429_Y	0.649	0.56
50_I	298_F	0.649	0.56
203_N	207_E	0.648	0.56
65_L	292_M	0.647	0.56
49_L	301_A	0.647	0.56
339_F	342_P	0.646	0.56
270_F	308_F	0.646	0.56
47_I	232_G	0.644	0.55
98_V	116_N	0.644	0.55
367_L	370_Y	0.644	0.55
220_K	224_K	0.642	0.55
369_T	372_D	0.642	0.55
50_I	320_T	0.639	0.55
66_K	70_K	0.637	0.55
169_N	195_S	0.636	0.55
188_V	272_L	0.636	0.55
286_N	410_S	0.635	0.54
99_T	107_A	0.633	0.54
58_Y	291_A	0.632	0.54
225_N	228_S	0.630	0.54
65_L	69_K	0.630	0.54
348_R	352_F	0.629	0.54
283_G	370_Y	0.629	0.54
174_D	178_E	0.624	0.53
206_K	220_K	0.622	0.53
152_H	278_Q	0.621	0.53
147_T	278_Q	0.621	0.53
251_S	297_D	0.621	0.53
234_F	250_P	0.621	0.53
222_M	234_F	0.620	0.53
170_S	200_K	0.619	0.53
225_N	229_Q	0.617	0.52
197_F	233_L	0.617	0.52
307_D	311_K	0.617	0.52
367_L	371_I	0.615	0.52
168_M	196_N	0.614	0.52
318_V	337_N	0.613	0.52
218_D	248_D	0.612	0.52
163_H	167_N	0.611	0.52
106_T	446_A	0.610	0.52
316_L	430_G	0.609	0.51
140_K	268_D	0.609	0.51
352_F	356_K	0.609	0.51
186_I	189_L	0.608	0.51
366_T	371_I	0.608	0.51
205_I	209_K	0.608	0.51
337_N	340_S	0.608	0.51
103_A	117_N	0.604	0.51
39_N	434_E	0.603	0.51
225_N	230_V	0.603	0.51
106_T	120_A	0.603	0.51
415_T	420_T	0.602	0.51
339_F	343_I	0.602	0.51
382_E	386_V	0.602	0.51
45_N	188_V	0.599	0.50
68_N	75_E	0.598	0.50
86_Q	439_Q	0.598	0.50
251_S	256_T	0.597	0.50
284_H	323_H	0.596	0.50
211_A	258_T	0.595	0.50
188_V	262_K	0.595	0.50
157_S	273_M	0.595	0.50
342_P	346_A	0.595	0.50
109_S	271_F	0.594	0.50
103_A	164_S	0.594	0.50
45_N	63_R	0.593	0.50
82_Y	302_Y	0.593	0.50
368_K	371_I	0.591	0.49
428_A	433_S	0.590	0.49
185_K	229_Q	0.590	0.49
332_A	337_N	0.589	0.49
109_S	130_T	0.588	0.49
377_A	384_Q	0.588	0.49
274_V	305_A	0.587	0.49
60_S	80_D	0.587	0.49
323_H	419_H	0.586	0.49
378_L	382_E	0.585	0.49
190_L	262_K	0.582	0.48
407_N	414_W	0.581	0.48
176_F	204_L	0.580	0.48
330_I	336_Y	0.580	0.48
306_I	314_H	0.579	0.48
105_A	446_A	0.579	0.48
284_H	419_H	0.577	0.48
153_A	323_H	0.573	0.47
111_G	188_V	0.573	0.47
257_N	303_K	0.573	0.47
153_A	419_H	0.572	0.47
67_D	71_T	0.571	0.47
146_A	150_I	0.571	0.47
205_I	233_L	0.569	0.47
78_A	302_Y	0.567	0.47
340_S	344_K	0.566	0.46
112_I	122_D	0.566	0.46
358_A	362_D	0.566	0.46
47_I	190_L	0.565	0.46
341_E	345_A	0.563	0.46
100_D	116_N	0.561	0.46
188_V	232_G	0.560	0.46
260_I	309_A	0.559	0.46
153_A	284_H	0.559	0.46
306_I	310_K	0.557	0.45
77_T	295_M	0.557	0.45
214_S	225_N	0.556	0.45
62_Y	292_M	0.554	0.45
208_F	324_S	0.553	0.45
199_R	202_R	0.553	0.45
328_Y	332_A	0.552	0.45
199_R	207_E	0.552	0.45
270_F	309_A	0.552	0.45
361_A	364_E	0.552	0.45
332_A	339_F	0.552	0.45
376_L	381_A	0.551	0.45
71_T	75_E	0.550	0.45
60_S	63_R	0.550	0.45
332_A	340_S	0.550	0.45
401_A	405_I	0.550	0.45
152_H	277_S	0.549	0.44
225_N	231_L	0.549	0.44
132_L	159_G	0.548	0.44
166_K	238_G	0.548	0.44
229_Q	265_K	0.548	0.44
107_A	191_G	0.547	0.44
84_V	437_A	0.547	0.44
80_D	423_D	0.546	0.44
380_K	389_A	0.544	0.44
85_G	438_G	0.544	0.44
404_N	408_K	0.544	0.44
39_N	42_E	0.541	0.43
363_V	367_L	0.541	0.43
251_S	294_E	0.540	0.43
380_K	384_Q	0.540	0.43
56_V	59_T	0.539	0.43
152_H	241_K	0.536	0.43
364_E	367_L	0.536	0.43
435_T	448_N	0.535	0.43
328_Y	331_G	0.535	0.43
134_A	455_Y	0.534	0.43
120_A	159_G	0.534	0.43
159_G	189_L	0.533	0.43
88_T	423_D	0.531	0.42
370_Y	373_Q	0.531	0.42
158_F	273_M	0.530	0.42
82_Y	317_V	0.529	0.42
155_P	284_H	0.529	0.42
184_H	229_Q	0.529	0.42
380_K	385_S	0.528	0.42
210_K	220_K	0.528	0.42
79_F	302_Y	0.528	0.42
368_K	372_D	0.526	0.42
362_D	387_E	0.525	0.42
106_T	294_E	0.524	0.42
299_E	427_Y	0.523	0.41
316_L	452_A	0.522	0.41
84_V	440_I	0.522	0.41
168_M	197_F	0.522	0.41
50_I	109_S	0.521	0.41
131_V	135_A	0.521	0.41
48_V	449_V	0.519	0.41
72_K	268_D	0.518	0.41
145_V	272_L	0.518	0.41
241_K	277_S	0.517	0.41
142_T	186_I	0.516	0.41
103_A	114_T	0.515	0.41
399_D	403_E	0.515	0.41
60_S	330_I	0.514	0.40
35_K	38_G	0.513	0.40
276_G	302_Y	0.512	0.40
223_L	265_K	0.510	0.40
362_D	366_T	0.510	0.40
155_P	323_H	0.510	0.40
369_T	373_Q	0.509	0.40
261_K	264_N	0.509	0.40
143_G	263_L	0.508	0.40
154_T	157_S	0.508	0.40
375_K	382_E	0.508	0.40
47_I	315_T	0.507	0.40
434_E	451_K	0.507	0.40
143_G	260_I	0.506	0.40
327_G	330_I	0.506	0.40
56_V	60_S	0.505	0.39
397_D	400_N	0.504	0.39
153_A	165_R	0.504	0.39
337_N	342_P	0.502	0.39
176_F	211_A	0.502	0.39
287_D	405_I	0.501	0.39
80_D	291_A	0.501	0.39
290_G	405_I	0.501	0.39
384_Q	387_E	0.501	0.39
274_V	309_A	0.500	0.39
368_K	373_Q	0.500	0.39
436_F	445_I	0.500	0.39

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3e2dA	2	0.8766	100	0.175	Contact Map
1k7hA	2	0.9134	100	0.283	Contact Map
2x98A	4	0.8658	100	0.341	Contact Map
1zedA	2	0.9134	100	0.367	Contact Map
3wbhA	2	0.8745	100	0.385	Contact Map
3a52A	2	0.8615	100	0.389	Contact Map
3tg0A	2	0.8333	100	0.523	Contact Map
2w5vA	2	0.7381	100	0.68	Contact Map
2mlyB	1	0.2684	100	0.806	Contact Map
3q3qA	2	0.8506	99.9	0.844	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0118 seconds.