GREMLIN Database
RECN - DNA repair protein RecN
UniProt: P17894 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 576 (531)
Sequences: 5188 (4305)
Seq/√Len: 186.8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
216_E298_R5.8531.00
537_S540_E3.9551.00
189_R333_E3.7351.00
180_S348_K3.5451.00
534_K540_E3.3251.00
480_V488_I3.2821.00
201_E331_E3.1831.00
8_K15_E3.0611.00
327_A331_E2.8491.00
201_E327_A2.8051.00
366_S370_K2.7861.00
319_T322_D2.7181.00
355_G359_A2.7091.00
273_N277_L2.5791.00
172_L354_V2.5311.00
481_S548_M2.5181.00
4_E17_T2.5121.00
346_S350_E2.3811.00
197_L327_A2.3681.00
298_R301_Y2.3621.00
394_F429_F2.3561.00
198_E202_S2.3501.00
190_L194_Q2.3271.00
172_L351_L2.3001.00
4_E19_S2.2891.00
26_V514_A2.2771.00
168_R350_E2.2351.00
80_C85_I2.2291.00
207_L321_E2.2241.00
243_G246_W2.2211.00
375_K379_E2.2111.00
194_Q338_E2.2101.00
203_A308_E2.1821.00
366_S424_I2.1661.00
45_L66_G2.1481.00
173_L177_K2.1131.00
521_A534_K2.0931.00
352_D355_G2.0741.00
358_V419_L2.0711.00
165_G354_V2.0621.00
173_L351_L2.0461.00
194_Q198_E2.0321.00
206_E212_Q2.0161.00
74_H80_C2.0121.00
177_K181_E1.9891.00
209_E305_R1.9721.00
212_Q216_E1.9621.00
243_G250_A1.9541.00
343_H346_S1.9421.00
175_K343_H1.9251.00
159_L163_Q1.9091.00
6_S17_T1.8961.00
397_E430_L1.8891.00
6_S15_E1.8771.00
318_A322_D1.8661.00
398_F425_D1.8651.00
171_K175_K1.8461.00
523_E532_R1.8431.00
350_E353_S1.8331.00
190_L334_I1.8291.00
361_E364_N1.8231.00
349_K353_S1.8091.00
65_E68_F1.8041.00
158_A368_I1.7971.00
176_L351_L1.7971.00
151_A372_W1.7941.00
519_Y536_L1.7891.00
205_L309_I1.7861.00
172_L176_L1.7851.00
348_K352_D1.7821.00
325_E329_K1.7701.00
437_E528_R1.7641.00
26_V517_H1.7611.00
325_E328_S1.7421.00
350_E354_V1.7411.00
153_A368_I1.7391.00
226_I230_L1.7331.00
213_L302_I1.7311.00
165_G361_E1.7301.00
243_G248_G1.7231.00
485_A507_L1.7151.00
233_A237_L1.7141.00
270_S277_L1.7041.00
43_S48_G1.6881.00
185_E189_R1.6861.00
200_I323_I1.6851.00
265_K269_E1.6831.00
377_A396_T1.6731.00
21_E535_P1.6631.00
178_Q182_S1.6591.00
108_V121_I1.6551.00
243_G247_V1.6461.00
317_G323_I1.6421.00
269_E273_N1.6371.00
352_D356_K1.6351.00
357_D361_E1.6301.00
77_L80_C1.6241.00
170_V173_L1.6011.00
329_K333_E1.5981.00
399_K426_L1.5921.00
328_S332_E1.5901.00
297_E300_N1.5891.00
172_L175_K1.5871.00
318_A323_I1.5811.00
544_E547_R1.5731.00
208_N211_E1.5711.00
332_E336_Q1.5671.00
304_T308_E1.5491.00
162_Y365_V1.5411.00
169_Y351_L1.5391.00
357_D360_V1.5301.00
274_S281_A1.5271.00
162_Y358_V1.5271.00
217_R302_I1.5261.00
356_K360_V1.5241.00
224_E228_E1.5231.00
18_V533_V1.5071.00
181_E185_E1.5031.00
489_A513_M1.5011.00
210_D313_K1.4811.00
448_G475_E1.4691.00
142_N145_Q1.4671.00
140_D428_K1.4671.00
328_S331_E1.4561.00
261_N288_M1.4521.00
177_K180_S1.4371.00
326_Y329_K1.4321.00
433_T445_V1.4271.00
10_F41_A1.4261.00
161_T361_E1.4251.00
519_Y534_K1.4231.00
270_S280_D1.4121.00
395_D439_L1.4011.00
326_Y330_I1.3931.00
131_Q448_G1.3931.00
359_A424_I1.3921.00
322_D325_E1.3901.00
222_N237_L1.3861.00
251_S255_E1.3781.00
539_Q543_A1.3761.00
371_T375_K1.3761.00
377_A395_D1.3721.00
359_A363_A1.3721.00
74_H77_L1.3671.00
32_G450_E1.3601.00
158_A161_T1.3571.00
176_L348_K1.3531.00
3_A91_M1.3451.00
363_A367_Q1.3411.00
493_H515_D1.3391.00
246_W249_M1.3391.00
222_N225_K1.3351.00
42_I472_I1.3291.00
210_D214_Q1.3281.00
448_G479_G1.3181.00
176_L344_L1.3161.00
108_V113_V1.3101.00
74_H78_G1.3071.00
189_R193_I1.2991.00
144_L422_Q1.2911.00
164_E168_R1.2851.00
25_T518_L1.2851.00
174_K178_Q1.2831.00
223_F227_Y1.2811.00
197_L334_I1.2791.00
374_K377_A1.2751.00
176_L180_S1.2751.00
396_T429_F1.2731.00
192_L196_Q1.2721.00
24_L503_C1.2701.00
360_V364_N1.2691.00
228_E232_N1.2691.00
516_T535_P1.2661.00
255_E272_S1.2641.00
62_A68_F1.2641.00
497_I515_D1.2601.00
324_L327_A1.2541.00
144_L427_V1.2531.00
435_T524_L1.2481.00
398_F427_V1.2471.00
345_Q348_K1.2431.00
300_N304_T1.2371.00
250_A254_L1.2361.00
331_E335_D1.2341.00
298_R302_I1.2341.00
217_R303_E1.2341.00
75_P80_C1.2331.00
168_R171_K1.2271.00
175_K178_Q1.2271.00
216_E302_I1.2231.00
191_D195_F1.2221.00
339_N342_S1.2191.00
217_R221_S1.2171.00
464_S498_G1.2151.00
208_N212_Q1.2111.00
197_L331_E1.2071.00
94_M122_G1.2051.00
267_M281_A1.2051.00
165_G168_R1.2051.00
335_D338_E1.2041.00
362_A424_I1.2041.00
351_L355_G1.2021.00
57_Y438_P1.2001.00
246_W250_A1.1991.00
11_A37_I1.1981.00
62_A65_E1.1921.00
160_K164_E1.1891.00
262_E265_K1.1831.00
161_T165_G1.1771.00
172_L350_E1.1761.00
173_L355_G1.1721.00
271_V281_A1.1701.00
95_R107_R1.1691.00
332_E335_D1.1581.00
214_Q218_Q1.1571.00
358_V362_A1.1551.00
205_L320_V1.1551.00
524_L529_T1.1511.00
14_E530_T1.1501.00
219_Q261_N1.1461.00
349_K352_D1.1411.00
213_L217_R1.1411.00
518_L533_V1.1401.00
486_Q490_E1.1381.00
366_S425_D1.1331.00
76_V79_V1.1291.00
335_D339_N1.1291.00
233_A236_A1.1261.00
222_N226_I1.1251.00
379_E382_R1.1221.00
9_N59_E1.1211.00
193_I197_L1.1201.00
175_K336_Q1.1151.00
198_E201_E1.1141.00
245_D248_G1.1121.00
276_Y280_D1.1111.00
208_N321_E1.1081.00
158_A364_N1.1071.00
185_E188_H1.1071.00
232_N253_Q1.1041.00
244_L248_G1.1031.00
216_E219_Q1.0971.00
266_K269_E1.0971.00
106_C113_V1.0851.00
168_R354_V1.0811.00
475_E504_I1.0791.00
307_N310_K1.0771.00
251_S254_L1.0761.00
191_D194_Q1.0711.00
353_S357_D1.0671.00
161_T164_E1.0641.00
234_Y238_R1.0631.00
525_K530_T1.0611.00
165_G357_D1.0591.00
348_K351_L1.0591.00
156_E160_K1.0571.00
229_S233_A1.0561.00
252_A255_E1.0551.00
341_D345_Q1.0471.00
117_S120_E1.0461.00
161_T364_N1.0461.00
229_S257_I1.0451.00
74_H79_V1.0391.00
274_S278_L1.0371.00
270_S274_S1.0331.00
203_A312_L1.0321.00
129_H455_M1.0301.00
32_G484_V1.0271.00
31_T484_V1.0261.00
182_S185_E1.0221.00
58_G68_F1.0151.00
158_A361_E1.0151.00
371_T378_D1.0131.00
302_I306_L1.0111.00
197_L330_I1.0080.99
366_S400_V1.0010.99
309_I324_L0.9970.99
247_V251_S0.9960.99
172_L347_L0.9950.99
486_Q513_M0.9940.99
12_I39_I0.9930.99
452_S479_G0.9930.99
184_Q188_H0.9910.99
351_L354_V0.9910.99
262_E266_K0.9900.99
65_E70_L0.9890.99
476_V507_L0.9890.99
67_L91_M0.9870.99
168_R172_L0.9860.99
320_V324_L0.9840.99
377_A381_H0.9830.99
7_I13_I0.9820.99
486_Q552_V0.9810.99
223_F292_L0.9790.99
518_L535_P0.9740.99
360_V363_A0.9690.99
370_K398_F0.9660.99
524_L527_G0.9630.99
453_R480_V0.9580.99
216_E220_I0.9570.99
139_E142_N0.9500.99
163_Q167_Q0.9490.99
397_E428_K0.9480.99
388_Y484_V0.9480.99
329_K332_E0.9480.99
114_T117_S0.9480.99
192_L195_F0.9470.99
78_G85_I0.9460.99
61_K97_D0.9440.99
132_H135_Q0.9440.99
370_K374_K0.9420.99
333_E336_Q0.9420.99
344_L348_K0.9410.99
378_D382_R0.9400.99
222_N233_A0.9390.99
58_G66_G0.9360.99
450_E475_E0.9360.99
384_L392_S0.9340.99
453_R484_V0.9340.99
263_P266_K0.9330.99
47_G477_D0.9330.99
508_P548_M0.9290.99
107_R112_L0.9280.99
233_A285_M0.9280.99
3_A69_L0.9260.99
225_K228_E0.9250.99
523_E530_T0.9240.99
275_Y279_E0.9190.99
158_A162_Y0.9180.99
345_Q349_K0.9180.99
313_K323_I0.9170.99
381_H385_K0.9160.99
367_Q370_K0.9160.99
67_L71_E0.9130.99
383_E491_K0.9110.99
257_I264_L0.9100.99
495_V501_V0.9090.99
187_A190_L0.9090.99
180_S344_L0.9090.99
162_Y362_A0.9070.99
211_E215_E0.9060.99
94_M121_I0.9050.99
437_E440_K0.9020.99
295_D301_Y0.9010.99
277_L281_A0.9000.99
212_Q215_E0.9000.99
508_P550_A0.8980.99
46_V126_L0.8980.99
480_V484_V0.8930.99
165_G169_Y0.8920.99
169_Y355_G0.8880.99
58_G62_A0.8870.99
539_Q542_V0.8860.99
127_D459_K0.8860.99
197_L201_E0.8850.99
32_G453_R0.8850.99
374_K378_D0.8850.99
127_D136_L0.8840.99
363_A400_V0.8780.99
96_R104_S0.8780.99
188_H191_D0.8770.99
364_N367_Q0.8760.99
320_V323_I0.8740.99
270_S281_A0.8720.99
354_V357_D0.8710.99
220_I294_F0.8700.99
140_D426_L0.8700.99
312_L316_Y0.8700.99
386_S491_K0.8690.98
227_Y230_L0.8690.98
247_V278_L0.8680.98
10_F44_L0.8680.98
227_Y231_Q0.8680.98
77_L81_A0.8650.98
250_A271_V0.8640.98
133_D136_L0.8590.98
171_K174_K0.8580.98
169_Y173_L0.8580.98
78_G81_A0.8570.98
193_I196_Q0.8540.98
307_N311_Q0.8500.98
44_L50_G0.8480.98
248_G251_S0.8470.98
179_L183_E0.8420.98
436_G529_T0.8400.98
309_I323_I0.8390.98
62_A66_G0.8380.98
272_S275_Y0.8340.98
242_G245_D0.8320.98
75_P79_V0.8320.98
494_K497_I0.8310.98
313_K320_V0.8300.98
44_L76_V0.8270.98
276_Y279_E0.8270.98
195_F199_E0.8270.98
475_E478_T0.8250.98
372_W375_K0.8240.98
475_E479_G0.8220.98
199_E315_K0.8210.98
79_V85_I0.8190.98
12_I37_I0.8190.98
211_E214_Q0.8150.98
393_T432_S0.8140.98
7_I38_I0.8130.98
364_N371_T0.8110.98
13_I16_L0.8100.98
157_S161_T0.8090.98
310_K313_K0.8080.98
189_R192_L0.8080.98
193_I330_I0.8070.98
485_A509_Q0.8060.98
367_Q371_T0.8060.98
484_V488_I0.8050.98
210_D310_K0.8050.98
175_K350_E0.8030.97
129_H132_H0.8000.97
193_I333_E0.7990.97
230_L233_A0.7980.97
229_S253_Q0.7970.97
270_S284_Q0.7970.97
230_L234_Y0.7960.97
157_S160_K0.7960.97
517_H541_K0.7940.97
270_S273_N0.7940.97
131_Q479_G0.7930.97
479_G506_H0.7910.97
69_L72_S0.7890.97
450_E453_R0.7890.97
145_Q149_K0.7890.97
186_M190_L0.7880.97
453_R475_E0.7870.97
432_S439_L0.7870.97
166_Y170_V0.7860.97
2_L78_G0.7860.97
312_L315_K0.7810.97
168_R357_D0.7800.97
400_V424_I0.7790.97
164_E167_Q0.7760.97
452_S506_H0.7740.97
214_Q217_R0.7700.97
435_T438_P0.7680.97
540_E543_A0.7660.97
346_S349_K0.7640.97
253_Q256_D0.7610.97
365_V369_R0.7610.97
226_I260_I0.7600.97
67_L70_L0.7580.96
47_G478_T0.7570.96
475_E506_H0.7570.96
493_H513_M0.7550.96
452_S475_E0.7540.96
452_S477_D0.7540.96
487_A490_E0.7530.96
152_G157_S0.7520.96
167_Q171_K0.7500.96
10_F40_D0.7490.96
524_L528_R0.7480.96
60_A100_T0.7480.96
264_L288_M0.7480.96
126_L130_G0.7480.96
363_A424_I0.7470.96
10_F54_F0.7460.96
538_K542_V0.7460.96
347_L351_L0.7450.96
224_E227_Y0.7440.96
525_K532_R0.7430.96
342_S346_S0.7410.96
286_R290_D0.7400.96
196_Q199_E0.7390.96
339_N343_H0.7390.96
322_D326_Y0.7380.96
38_I502_L0.7360.96
170_V174_K0.7360.96
324_L328_S0.7360.96
376_L396_T0.7340.96
20_F518_L0.7340.96
7_I37_I0.7330.96
94_M118_L0.7330.96
162_Y165_G0.7310.96
448_G452_S0.7310.96
383_E386_S0.7300.96
36_S40_D0.7300.96
342_S345_Q0.7300.96
273_N276_Y0.7270.96
145_Q422_Q0.7260.95
5_L20_F0.7260.95
180_S184_Q0.7260.95
303_E307_N0.7250.95
56_R66_G0.7240.95
385_K390_E0.7230.95
541_K546_G0.7220.95
9_N14_E0.7210.95
453_R506_H0.7210.95
259_D262_E0.7210.95
250_A253_Q0.7190.95
247_V250_A0.7150.95
295_D298_R0.7140.95
173_L176_L0.7140.95
21_E516_T0.7130.95
165_G172_L0.7120.95
75_P78_G0.7120.95
391_K435_T0.7120.95
304_T307_N0.7120.95
230_L288_M0.7120.95
450_E480_V0.7100.95
428_K443_S0.7100.95
236_A240_E0.7100.95
50_G98_I0.7090.95
250_A255_E0.7090.95
225_K229_S0.7090.95
65_E71_E0.7080.95
144_L398_F0.7080.95
452_S459_K0.7030.95
353_S356_K0.7020.95
434_N437_E0.7020.95
431_I445_V0.7010.95
135_Q138_M0.7010.95
379_E383_E0.6990.94
229_S232_N0.6990.94
94_M106_C0.6990.94
215_E219_Q0.6980.94
477_D507_L0.6980.94
284_Q287_N0.6970.94
391_K524_L0.6970.94
76_V80_C0.6950.94
32_G480_V0.6950.94
450_E504_I0.6940.94
45_L64_L0.6940.94
162_Y166_Y0.6930.94
521_A532_R0.6920.94
455_M478_T0.6920.94
381_H392_S0.6910.94
29_G33_A0.6900.94
97_D107_R0.6900.94
280_D283_F0.6870.94
215_E218_Q0.6860.94
266_K284_Q0.6860.94
258_S261_N0.6860.94
274_S277_L0.6830.94
238_R241_Q0.6820.94
381_H393_T0.6820.94
382_R386_S0.6810.94
210_D320_V0.6800.94
476_V510_V0.6800.94
481_S544_E0.6790.94
206_E209_E0.6790.94
483_R486_Q0.6770.93
287_N290_D0.6770.93
45_L78_G0.6760.93
28_T475_E0.6750.93
143_H396_T0.6710.93
306_L310_K0.6710.93
455_M484_V0.6700.93
477_D489_A0.6670.93
327_A330_I0.6660.93
452_S476_V0.6650.93
147_L427_V0.6640.93
391_K394_F0.6640.93
292_L295_D0.6620.93
134_N138_M0.6620.93
39_I504_I0.6590.93
373_A377_A0.6590.93
340_R344_L0.6580.92
127_D132_H0.6570.92
9_N60_A0.6570.92
452_S455_M0.6570.92
318_A326_Y0.6560.92
282_T286_R0.6550.92
269_E272_S0.6530.92
505_T511_A0.6510.92
483_R487_A0.6500.92
543_A553_E0.6500.92
223_F226_I0.6490.92
362_A419_L0.6490.92
127_D130_G0.6480.92
18_V38_I0.6460.92
293_E296_P0.6460.92
129_H137_L0.6450.92
504_I520_I0.6450.92
226_I288_M0.6450.92
116_A119_R0.6440.92
363_A366_S0.6440.92
175_K179_L0.6430.92
4_E67_L0.6430.92
122_G125_L0.6430.92
4_E79_V0.6430.92
296_P299_L0.6420.92
190_L338_E0.6400.91
452_S489_A0.6390.91
47_G448_G0.6350.91
225_K233_A0.6330.91
186_M337_I0.6320.91
11_A36_S0.6320.91
12_I16_L0.6320.91
459_K478_T0.6300.91
455_M507_L0.6300.91
232_N236_A0.6290.91
135_Q143_H0.6270.91
466_Q499_S0.6270.91
514_A517_H0.6260.91
490_E513_M0.6260.91
339_N346_S0.6250.90
162_Y361_E0.6240.90
167_Q421_E0.6230.90
450_E484_V0.6230.90
65_E112_L0.6200.90
235_N239_S0.6190.90
393_T439_L0.6190.90
33_A475_E0.6180.90
210_D306_L0.6150.90
343_H347_L0.6140.90
448_G504_I0.6130.90
222_N241_Q0.6120.90
147_L150_F0.6110.89
171_K178_Q0.6100.89
234_Y282_T0.6080.89
230_L237_L0.6070.89
153_A158_A0.6050.89
452_S480_V0.6030.89
153_A156_E0.6030.89
453_R479_G0.6030.89
8_K63_E0.6010.89
483_R553_E0.6010.89
316_Y323_I0.6010.89
122_G126_L0.6000.89
419_L424_I0.5990.89
242_G248_G0.5990.89
40_D502_L0.5980.88
32_G506_H0.5970.88
205_L209_E0.5970.88
122_G130_G0.5960.88
484_V487_A0.5960.88
11_A484_V0.5960.88
68_F71_E0.5950.88
174_K177_K0.5930.88
460_S495_V0.5920.88
187_A191_D0.5890.88
151_A368_I0.5880.88
32_G459_K0.5880.88
67_L93_V0.5880.88
222_N227_Y0.5880.88
163_Q421_E0.5880.88
493_H496_S0.5880.88
127_D131_Q0.5850.87
223_F237_L0.5850.87
431_I454_V0.5830.87
218_Q221_S0.5830.87
153_A159_L0.5830.87
375_K526_D0.5820.87
258_S265_K0.5820.87
194_Q334_I0.5820.87
168_R353_S0.5820.87
491_K495_V0.5810.87
380_I458_I0.5810.87
152_G156_E0.5800.87
248_G255_E0.5790.87
371_T526_D0.5780.87
159_L162_Y0.5780.87
455_M459_K0.5760.87
27_L520_I0.5760.87
37_I40_D0.5740.86
6_S77_L0.5740.86
265_K268_S0.5730.86
32_G449_G0.5730.86
32_G455_M0.5720.86
263_P291_E0.5720.86
37_I477_D0.5720.86
459_K506_H0.5710.86
150_F379_E0.5710.86
535_P538_K0.5700.86
223_F230_L0.5700.86
423_G427_V0.5680.86
420_T423_G0.5670.86
131_Q452_S0.5660.86
478_T507_L0.5650.85
242_G246_W0.5650.85
453_R482_G0.5650.85
62_A70_L0.5650.85
236_A250_A0.5620.85
418_Q422_Q0.5600.85
430_L439_L0.5590.85
200_I203_A0.5590.85
261_N264_L0.5580.85
3_A19_S0.5560.85
220_I299_L0.5560.85
143_H146_L0.5540.84
400_V425_D0.5540.84
64_L70_L0.5530.84
450_E506_H0.5530.84
475_E480_V0.5530.84
532_R538_K0.5520.84
66_G70_L0.5520.84
534_K538_K0.5500.84
237_L241_Q0.5500.84
382_R385_K0.5480.84
381_H384_L0.5480.84
160_K163_Q0.5480.84
251_S268_S0.5460.84
77_L85_I0.5460.84
267_M284_Q0.5440.83
70_L77_L0.5440.83
526_D539_Q0.5440.83
12_I477_D0.5440.83
153_A157_S0.5430.83
63_E68_F0.5430.83
388_Y492_I0.5430.83
234_Y239_S0.5420.83
188_H192_L0.5410.83
358_V361_E0.5410.83
492_I503_C0.5400.83
12_I484_V0.5400.83
227_Y240_E0.5400.83
47_G450_E0.5390.83
134_N137_L0.5390.83
452_S485_A0.5390.83
434_N442_L0.5370.82
179_L354_V0.5370.82
300_N303_E0.5360.82
534_K543_A0.5360.82
123_R139_E0.5360.82
371_T374_K0.5350.82
361_E368_I0.5350.82
58_G61_K0.5340.82
466_Q472_I0.5340.82
477_D506_H0.5330.82
166_Y169_Y0.5330.82
27_L38_I0.5330.82
228_E231_Q0.5300.82
49_R115_I0.5300.82
530_T534_K0.5290.82
490_E493_H0.5280.81
183_E187_A0.5280.81
209_E212_Q0.5270.81
127_D492_I0.5260.81
455_M480_V0.5260.81
376_L380_I0.5260.81
477_D488_I0.5250.81
395_D398_F0.5250.81
545_I550_A0.5250.81
473_F479_G0.5230.81
330_I333_E0.5230.81
178_Q181_E0.5220.81
113_V117_S0.5220.81
231_Q235_N0.5220.81
79_V121_I0.5210.81
453_R485_A0.5200.80
416_P419_L0.5200.80
63_E66_G0.5190.80
450_E459_K0.5190.80
239_S242_G0.5180.80
452_S478_T0.5180.80
215_E262_E0.5180.80
28_T477_D0.5170.80
11_A477_D0.5170.80
452_S484_V0.5160.80
31_T475_E0.5160.80
477_D480_V0.5140.80
502_L535_P0.5140.80
39_I128_I0.5140.80
58_G67_L0.5140.80
219_Q226_I0.5130.80
347_L350_E0.5130.80
422_Q425_D0.5120.79
243_G251_S0.5120.79
528_R531_T0.5120.79
528_R532_R0.5110.79
31_T481_S0.5110.79
201_E204_K0.5110.79
461_I464_S0.5100.79
238_R242_G0.5100.79
364_N368_I0.5090.79
222_N238_R0.5090.79
380_I394_F0.5080.79
446_A452_S0.5080.79
475_E484_V0.5070.79
221_S303_E0.5070.79
355_G358_V0.5070.79
12_I459_K0.5070.79
7_I41_A0.5070.79
58_G63_E0.5060.79
312_L323_I0.5060.79
80_C92_I0.5060.79
480_V506_H0.5050.79
230_L257_I0.5050.79
456_L459_K0.5040.78
519_Y543_A0.5040.78
56_R62_A0.5040.78
287_N291_E0.5040.78
453_R504_I0.5030.78
44_L549_I0.5030.78
106_C115_I0.5030.78
182_S186_M0.5030.78
122_G133_D0.5020.78
310_K314_R0.5020.78
453_R476_V0.5010.78
68_F80_C0.5000.78
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ad8A 1 0.783 100 0.315 Contact Map
4abyA 1 0.6372 100 0.46 Contact Map
4ux3A 1 0.7344 100 0.479 Contact Map
3zgxA 2 0.5903 100 0.525 Contact Map
1w1wA 2 0.5434 100 0.573 Contact Map
3auyA 2 0.6024 100 0.583 Contact Map
4i99A 2 0.5382 100 0.639 Contact Map
3qf7A 2 0.5729 100 0.682 Contact Map
3qktA 2 0.5469 100 0.686 Contact Map
2o5vA 1 0.5955 100 0.708 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0145 seconds.