XYLA - BACSU - GREMLIN Contacts

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XYLA - Xylose isomerase

UniProt:	P0CI80	Sequences: MAQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAATMQRPWDHYKGMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGAATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPKPKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGHPLLGWDTDEFPTDLYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIYAHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGIGLEIIEGRANFHTLEQYALNHKSIKNESGRQEKLKAILNQYILEV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	445 (428)
Sequences:	953 (381)
Seq/√Len:	18.4

ECOLI - XYLA
BACSU - XYLA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
104_F	136_M	4.868	1.00
35_N	38_E	4.803	1.00
133_K	185_E	4.509	1.00
176_V	218_F	4.405	1.00
38_E	374_K	4.140	1.00
253_A	271_L	3.575	1.00
44_T	47_E	3.573	1.00
213_D	263_Y	3.568	1.00
89_V	132_I	3.515	1.00
130_G	185_E	3.444	1.00
364_A	436_A	3.152	0.99
181_E	225_Y	3.081	0.99
104_F	132_I	3.079	0.99
402_L	406_E	2.980	0.99
41_G	377_H	2.971	0.99
190_N	236_L	2.962	0.99
228_E	412_H	2.961	0.99
210_F	397_T	2.928	0.99
21_E	27_N	2.898	0.99
146_N	183_A	2.809	0.98
183_A	188_A	2.791	0.98
40_I	374_K	2.697	0.98
95_M	359_I	2.656	0.98
388_V	434_L	2.487	0.96
253_A	273_L	2.473	0.96
161_A	218_F	2.469	0.96
96_F	141_V	2.454	0.96
33_Y	374_K	2.446	0.96
129_M	182_T	2.436	0.96
46_K	102_P	2.408	0.96
90_E	135_Y	2.394	0.95
31_F	366_M	2.386	0.95
20_Y	23_K	2.373	0.95
214_N	405_I	2.373	0.95
257_I	297_L	2.362	0.95
39_V	44_T	2.307	0.94
377_H	381_E	2.306	0.94
59_F	92_A	2.274	0.94
32_K	440_Q	2.258	0.94
301_V	331_I	2.246	0.94
53_I	101_A	2.194	0.93
293_R	334_N	2.153	0.92
97_E	141_V	2.137	0.92
92_A	96_F	2.121	0.91
37_Q	44_T	2.108	0.91
53_I	59_F	2.107	0.91
316_E	435_K	2.094	0.91
387_D	391_H	2.042	0.90
403_E	408_R	2.041	0.90
59_F	96_F	2.036	0.90
289_L	301_V	2.000	0.89
324_T	368_A	1.994	0.89
332_L	373_L	1.945	0.87
103_F	189_E	1.922	0.87
86_K	127_M	1.916	0.87
53_I	99_L	1.908	0.86
409_A	413_T	1.908	0.86
410_N	413_T	1.859	0.85
163_S	396_F	1.858	0.85
117_T	120_E	1.844	0.84
35_N	374_K	1.842	0.84
209_K	262_Q	1.834	0.84
129_M	185_E	1.818	0.83
134_D	138_N	1.816	0.83
146_N	188_A	1.768	0.82
135_Y	138_N	1.762	0.81
69_A	154_P	1.744	0.81
82_M	127_M	1.718	0.80
98_K	359_I	1.717	0.80
37_Q	46_K	1.697	0.79
115_G	124_N	1.692	0.79
334_N	337_L	1.686	0.78
45_L	373_L	1.686	0.78
179_G	183_A	1.685	0.78
257_I	261_K	1.662	0.77
433_K	437_I	1.653	0.77
162_T	219_M	1.646	0.77
109_R	121_T	1.629	0.76
210_F	405_I	1.623	0.76
193_F	222_A	1.607	0.75
55_Y	92_A	1.597	0.74
29_L	360_Y	1.594	0.74
220_H	264_G	1.581	0.74
102_P	141_V	1.567	0.73
246_T	307_H	1.566	0.73
210_F	214_N	1.557	0.73
51_F	366_M	1.549	0.72
201_E	351_S	1.539	0.72
90_E	131_M	1.535	0.71
208_L	291_M	1.526	0.71
146_N	179_G	1.524	0.71
212_L	254_A	1.523	0.71
275_A	285_F	1.520	0.71
329_Y	379_L	1.519	0.71
261_K	266_D	1.514	0.70
192_V	236_L	1.508	0.70
223_V	268_H	1.499	0.70
129_M	133_K	1.489	0.69
109_R	122_N	1.478	0.68
226_A	235_F	1.478	0.68
25_S	32_K	1.470	0.68
130_G	133_K	1.457	0.67
401_G	404_I	1.456	0.67
390_Q	397_T	1.454	0.67
53_I	96_F	1.424	0.66
235_F	269_F	1.422	0.65
242_K	310_L	1.422	0.65
133_K	137_R	1.421	0.65
258_A	261_K	1.418	0.65
301_V	342_L	1.390	0.64
256_T	271_L	1.390	0.64
169_F	396_F	1.389	0.64
227_K	268_H	1.387	0.63
112_A	124_N	1.364	0.62
416_Q	420_N	1.348	0.61
365_G	368_A	1.345	0.61
223_V	227_K	1.345	0.61
257_I	295_H	1.343	0.61
54_A	362_H	1.342	0.61
415_E	419_L	1.342	0.61
27_N	30_A	1.338	0.61
212_L	263_Y	1.333	0.60
318_P	365_G	1.322	0.60
109_R	175_Q	1.320	0.59
220_H	224_D	1.315	0.59
385_F	438_L	1.309	0.59
119_K	123_Q	1.309	0.59
298_L	337_L	1.307	0.59
180_L	226_A	1.290	0.58
218_F	411_F	1.277	0.57
289_L	327_A	1.267	0.56
21_E	25_S	1.264	0.56
378_K	441_Y	1.262	0.56
384_V	441_Y	1.260	0.56
21_E	30_A	1.259	0.56
183_A	233_G	1.254	0.55
208_L	254_A	1.241	0.55
60_T	88_R	1.240	0.55
285_F	327_A	1.239	0.55
132_I	136_M	1.232	0.54
114_E	171_Y	1.223	0.54
397_T	405_I	1.222	0.53
18_V	359_I	1.210	0.53
69_A	152_T	1.210	0.53
121_T	171_Y	1.200	0.52
35_N	40_I	1.200	0.52
403_E	413_T	1.193	0.52
262_Q	295_H	1.193	0.52
166_A	395_S	1.192	0.52
162_T	212_L	1.186	0.51
48_H	52_S	1.172	0.50
81_G	84_L	1.170	0.50
356_D	360_Y	1.169	0.50
320_D	323_S	1.168	0.50
356_D	430_R	1.167	0.50
184_K	229_I	1.156	0.49
97_E	139_S	1.149	0.49
255_T	291_M	1.148	0.49
158_H	351_S	1.148	0.49
290_R	330_E	1.145	0.49
50_R	103_F	1.144	0.49
360_Y	436_A	1.136	0.48
97_E	138_N	1.136	0.48
333_Q	386_E	1.135	0.48
18_V	29_L	1.120	0.47
29_L	109_R	1.115	0.47
334_N	338_G	1.111	0.47
118_L	418_A	1.107	0.46
58_T	358_L	1.102	0.46
179_G	188_A	1.101	0.46
276_N	306_G	1.096	0.46
324_T	372_G	1.085	0.45
114_E	121_T	1.084	0.45
33_Y	38_E	1.081	0.45
86_K	128_I	1.075	0.44
254_A	291_M	1.075	0.44
39_V	42_G	1.071	0.44
234_Q	339_S	1.070	0.44
36_P	100_D	1.068	0.44
126_D	178_K	1.068	0.44
86_K	131_M	1.064	0.44
180_L	235_F	1.063	0.44
117_T	121_T	1.063	0.44
51_F	369_F	1.061	0.43
53_I	100_D	1.056	0.43
305_Q	319_T	1.050	0.43
242_K	309_L	1.048	0.43
114_E	153_N	1.046	0.43
66_V	71_T	1.043	0.42
431_Q	435_K	1.040	0.42
286_E	320_D	1.033	0.42
142_K	189_E	1.033	0.42
19_V	420_N	1.031	0.42
121_T	174_A	1.025	0.41
333_Q	380_I	1.024	0.41
253_A	257_I	1.021	0.41
25_S	28_P	1.021	0.41
332_L	380_I	1.015	0.41
216_A	220_H	1.010	0.40
234_Q	270_K	1.010	0.40
258_A	291_M	1.008	0.40
113_P	124_N	1.007	0.40
190_N	338_G	1.006	0.40
222_A	235_F	1.006	0.40
165_N	427_E	1.004	0.40
48_H	373_L	1.004	0.40
166_A	400_I	1.002	0.40
128_I	132_I	1.001	0.40
146_N	435_K	0.999	0.40
43_K	48_H	0.997	0.40
91_A	355_P	0.992	0.39
161_A	215_L	0.989	0.39
58_T	348_V	0.986	0.39
89_V	131_M	0.983	0.39
226_A	268_H	0.982	0.39
360_Y	430_R	0.977	0.38
125_L	182_T	0.973	0.38
432_E	435_K	0.970	0.38
215_L	219_M	0.967	0.38
131_M	135_Y	0.966	0.38
146_N	316_E	0.965	0.38
220_H	223_V	0.955	0.37
404_I	414_L	0.953	0.37
72_M	348_V	0.950	0.37
184_K	226_A	0.944	0.37
165_N	426_N	0.943	0.36
236_L	338_G	0.938	0.36
184_K	232_T	0.937	0.36
63_G	246_T	0.928	0.36
212_L	215_L	0.928	0.36
40_I	373_L	0.927	0.36
100_D	140_G	0.919	0.35
20_Y	35_N	0.914	0.35
236_L	339_S	0.912	0.35
60_T	81_G	0.912	0.35
222_A	411_F	0.910	0.35
175_Q	179_G	0.905	0.34
388_V	433_K	0.897	0.34
18_V	363_I	0.897	0.34
325_T	375_V	0.895	0.34
271_L	297_L	0.893	0.34
321_L	368_A	0.893	0.34
161_A	176_V	0.892	0.34
261_K	295_H	0.891	0.34
33_Y	440_Q	0.891	0.34
42_G	377_H	0.890	0.33
64_T	69_A	0.889	0.33
253_A	288_E	0.888	0.33
208_L	290_R	0.885	0.33
166_A	399_G	0.884	0.33
14_S	26_T	0.881	0.33
116_S	120_E	0.878	0.33
400_I	417_Y	0.874	0.33
207_D	210_F	0.869	0.32
103_F	142_K	0.864	0.32
169_F	404_I	0.863	0.32
380_I	386_E	0.860	0.32
14_S	356_D	0.858	0.32
150_M	172_A	0.855	0.32
328_M	342_L	0.855	0.32
319_T	364_A	0.853	0.31
285_F	289_L	0.850	0.31
371_R	375_V	0.850	0.31
380_I	441_Y	0.849	0.31
105_A	365_G	0.846	0.31
45_L	332_L	0.846	0.31
293_R	330_E	0.844	0.31
36_P	46_K	0.843	0.31
166_A	396_F	0.843	0.31
65_D	198_E	0.834	0.30
95_M	98_K	0.834	0.30
18_V	31_F	0.833	0.30
207_D	390_Q	0.831	0.30
217_R	405_I	0.829	0.30
100_D	141_V	0.827	0.30
342_L	369_F	0.827	0.30
261_K	297_L	0.824	0.30
15_A	356_D	0.823	0.30
115_G	153_N	0.823	0.30
82_M	113_P	0.822	0.30
213_D	262_Q	0.820	0.30
384_V	388_V	0.819	0.30
255_T	258_A	0.818	0.30
22_G	25_S	0.815	0.29
160_A	431_Q	0.812	0.29
44_T	102_P	0.809	0.29
41_G	380_I	0.805	0.29
19_V	402_L	0.801	0.29
50_R	339_S	0.800	0.29
150_M	156_F	0.799	0.29
19_V	267_N	0.797	0.29
52_S	251_T	0.796	0.28
59_F	141_V	0.796	0.28
24_D	39_V	0.795	0.28
305_Q	316_E	0.793	0.28
258_A	295_H	0.793	0.28
213_D	416_Q	0.792	0.28
319_T	365_G	0.792	0.28
83_D	139_S	0.791	0.28
214_N	397_T	0.790	0.28
96_F	101_A	0.788	0.28
141_V	172_A	0.787	0.28
384_V	387_D	0.784	0.28
43_K	47_E	0.780	0.28
208_L	294_V	0.779	0.28
418_A	421_H	0.774	0.27
193_F	235_F	0.769	0.27
74_R	348_V	0.768	0.27
157_V	426_N	0.767	0.27
178_K	181_E	0.767	0.27
208_L	295_H	0.766	0.27
54_A	105_A	0.766	0.27
19_V	24_D	0.762	0.27
383_R	386_E	0.762	0.27
118_L	126_D	0.762	0.27
378_K	382_D	0.760	0.27
253_A	292_A	0.759	0.27
237_I	269_F	0.755	0.26
83_D	87_M	0.754	0.26
202_T	434_L	0.753	0.26
31_F	342_L	0.748	0.26
212_L	291_M	0.746	0.26
256_T	316_E	0.745	0.26
26_T	440_Q	0.744	0.26
52_S	105_A	0.743	0.26
95_M	99_L	0.742	0.26
32_K	39_V	0.741	0.26
29_L	356_D	0.741	0.26
22_G	27_N	0.741	0.26
109_R	115_G	0.740	0.26
400_I	404_I	0.740	0.26
100_D	139_S	0.739	0.26
94_E	332_L	0.738	0.26
136_M	140_G	0.738	0.26
115_G	120_E	0.732	0.25
319_T	368_A	0.727	0.25
149_N	152_T	0.727	0.25
48_H	332_L	0.725	0.25
105_A	289_L	0.724	0.25
316_E	432_E	0.722	0.25
121_T	178_K	0.720	0.25
53_I	92_A	0.719	0.25
148_A	156_F	0.718	0.25
112_A	131_M	0.718	0.25
236_L	337_L	0.717	0.25
306_G	310_L	0.714	0.25
189_E	232_T	0.714	0.25
190_N	337_L	0.714	0.25
65_D	197_R	0.712	0.24
63_G	72_M	0.710	0.24
183_A	231_Y	0.709	0.24
316_E	365_G	0.709	0.24
275_A	279_T	0.706	0.24
215_L	442_I	0.704	0.24
214_N	217_R	0.703	0.24
298_L	338_G	0.702	0.24
59_F	95_M	0.702	0.24
96_F	102_P	0.697	0.24
146_N	191_Y	0.696	0.24
53_I	362_H	0.696	0.24
202_T	351_S	0.694	0.24
257_I	291_M	0.694	0.24
278_A	288_E	0.694	0.24
122_N	178_K	0.693	0.24
167_D	417_Y	0.693	0.24
348_V	358_L	0.692	0.24
16_N	26_T	0.692	0.24
40_I	377_H	0.689	0.23
36_P	44_T	0.689	0.23
275_A	308_P	0.687	0.23
37_Q	62_D	0.686	0.23
391_H	427_E	0.686	0.23
189_E	339_S	0.684	0.23
360_Y	364_A	0.682	0.23
111_I	128_I	0.682	0.23
417_Y	421_H	0.681	0.23
310_L	404_I	0.680	0.23
140_G	410_N	0.679	0.23
276_N	279_T	0.679	0.23
353_F	426_N	0.678	0.23
41_G	44_T	0.677	0.23
216_A	262_Q	0.676	0.23
193_F	268_H	0.674	0.23
324_T	369_F	0.673	0.23
65_D	68_G	0.673	0.23
118_L	178_K	0.673	0.23
389_I	410_N	0.672	0.23
26_T	382_D	0.672	0.23
257_I	396_F	0.671	0.23
316_E	319_T	0.670	0.23
234_Q	309_L	0.668	0.22
305_Q	364_A	0.668	0.22
375_V	441_Y	0.667	0.22
325_T	332_L	0.667	0.22
216_A	266_D	0.666	0.22
18_V	398_E	0.665	0.22
111_I	131_M	0.664	0.22
122_N	185_E	0.664	0.22
309_L	323_S	0.664	0.22
321_L	371_R	0.664	0.22
256_T	435_K	0.662	0.22
81_G	112_A	0.660	0.22
99_L	385_F	0.657	0.22
31_F	51_F	0.656	0.22
225_Y	410_N	0.655	0.22
126_D	182_T	0.655	0.22
16_N	19_V	0.655	0.22
201_E	310_L	0.654	0.22
18_V	27_N	0.653	0.22
109_R	112_A	0.652	0.22
126_D	185_E	0.652	0.22
26_T	267_N	0.651	0.22
19_V	46_K	0.650	0.22
119_K	419_L	0.648	0.22
122_N	126_D	0.647	0.22
83_D	137_R	0.646	0.22
375_V	442_I	0.646	0.22
183_A	435_K	0.645	0.21
114_E	120_E	0.645	0.21
50_R	102_P	0.642	0.21
253_A	291_M	0.640	0.21
118_L	122_N	0.639	0.21
54_A	226_A	0.638	0.21
355_P	360_Y	0.636	0.21
400_I	403_E	0.635	0.21
22_G	30_A	0.634	0.21
386_E	389_I	0.634	0.21
219_M	223_V	0.634	0.21
365_G	432_E	0.632	0.21
17_K	46_K	0.631	0.21
45_L	374_K	0.630	0.21
119_K	420_N	0.630	0.21
234_Q	298_L	0.630	0.21
301_V	337_L	0.629	0.21
70_A	154_P	0.628	0.21
256_T	273_L	0.628	0.21
401_G	414_L	0.627	0.21
297_L	422_K	0.627	0.21
54_A	60_T	0.627	0.21
212_L	262_Q	0.626	0.21
20_Y	361_A	0.626	0.21
104_F	140_G	0.625	0.21
138_N	141_V	0.624	0.21
27_N	289_L	0.623	0.21
139_S	282_G	0.622	0.21
223_V	226_A	0.620	0.20
180_L	401_G	0.620	0.20
26_T	384_V	0.616	0.20
153_N	171_Y	0.616	0.20
156_F	172_A	0.615	0.20
95_M	358_L	0.613	0.20
109_R	116_S	0.612	0.20
318_P	329_Y	0.612	0.20
221_M	413_T	0.611	0.20
46_K	140_G	0.610	0.20
273_L	301_V	0.609	0.20
161_A	180_L	0.609	0.20
122_N	415_E	0.607	0.20
24_D	416_Q	0.607	0.20
55_Y	89_V	0.606	0.20
118_L	213_D	0.606	0.20
293_R	298_L	0.605	0.20
193_F	227_K	0.604	0.20
39_V	377_H	0.603	0.20
148_A	176_V	0.601	0.20
202_T	349_R	0.600	0.20
257_I	271_L	0.599	0.20
114_E	117_T	0.599	0.20
66_V	77_D	0.599	0.20
132_I	182_T	0.598	0.20
53_I	58_T	0.597	0.20
332_L	376_A	0.597	0.20
190_N	234_Q	0.596	0.19
26_T	408_R	0.595	0.19
112_A	115_G	0.595	0.19
118_L	182_T	0.594	0.19
251_T	282_G	0.594	0.19
118_L	171_Y	0.594	0.19
273_L	289_L	0.593	0.19
156_F	175_Q	0.593	0.19
39_V	408_R	0.593	0.19
437_I	440_Q	0.592	0.19
37_Q	47_E	0.592	0.19
97_E	140_G	0.592	0.19
286_E	327_A	0.592	0.19
191_Y	296_G	0.591	0.19
41_G	332_L	0.591	0.19
21_E	28_P	0.591	0.19
202_T	223_V	0.589	0.19
158_H	353_F	0.589	0.19
91_A	327_A	0.588	0.19
379_L	384_V	0.587	0.19
236_L	270_K	0.587	0.19
360_Y	433_K	0.586	0.19
22_G	28_P	0.585	0.19
100_D	172_A	0.585	0.19
17_K	79_Y	0.584	0.19
70_A	153_N	0.583	0.19
17_K	97_E	0.582	0.19
15_A	359_I	0.580	0.19
121_T	182_T	0.580	0.19
104_F	410_N	0.580	0.19
413_T	416_Q	0.579	0.19
223_V	269_F	0.578	0.19
181_E	213_D	0.576	0.19
26_T	123_Q	0.575	0.19
150_M	245_T	0.574	0.19
79_Y	84_L	0.574	0.19
326_L	330_E	0.573	0.19
120_E	124_N	0.572	0.19
349_R	432_E	0.572	0.19
84_L	113_P	0.572	0.19
14_S	19_V	0.571	0.19
25_S	30_A	0.571	0.19
49_L	282_G	0.571	0.19
97_E	136_M	0.570	0.18
41_G	381_E	0.569	0.18
320_D	326_L	0.569	0.18
207_D	214_N	0.569	0.18
276_N	310_L	0.568	0.18
18_V	109_R	0.568	0.18
92_A	141_V	0.567	0.18
96_F	362_H	0.567	0.18
209_K	293_R	0.566	0.18
37_Q	127_M	0.566	0.18
286_E	326_L	0.565	0.18
58_T	81_G	0.564	0.18
36_P	77_D	0.564	0.18
219_M	327_A	0.564	0.18
264_G	297_L	0.563	0.18
320_D	325_T	0.562	0.18
386_E	390_Q	0.562	0.18
55_Y	59_F	0.561	0.18
125_L	178_K	0.560	0.18
403_E	409_A	0.560	0.18
62_D	69_A	0.559	0.18
399_G	402_L	0.559	0.18
266_D	297_L	0.558	0.18
271_L	422_K	0.558	0.18
44_T	69_A	0.558	0.18
167_D	400_I	0.558	0.18
396_F	399_G	0.558	0.18
421_H	424_I	0.557	0.18
359_I	363_I	0.556	0.18
290_R	305_Q	0.555	0.18
84_L	87_M	0.555	0.18
178_K	182_T	0.554	0.18
192_V	334_N	0.553	0.18
132_I	415_E	0.553	0.18
220_H	263_Y	0.550	0.18
215_L	414_L	0.550	0.18
214_N	409_A	0.549	0.18
23_K	32_K	0.549	0.18
61_A	72_M	0.548	0.18
144_L	328_M	0.547	0.18
242_K	251_T	0.546	0.18
114_E	155_R	0.545	0.18
44_T	50_R	0.545	0.18
40_I	371_R	0.545	0.18
77_D	84_L	0.544	0.18
291_M	295_H	0.543	0.17
20_Y	320_D	0.543	0.17
144_L	265_L	0.543	0.17
87_M	382_D	0.542	0.17
15_A	29_L	0.542	0.17
214_N	407_G	0.541	0.17
384_V	440_Q	0.540	0.17
319_T	432_E	0.540	0.17
123_Q	127_M	0.538	0.17
122_N	156_F	0.538	0.17
132_I	167_D	0.537	0.17
14_S	172_A	0.536	0.17
396_F	400_I	0.536	0.17
301_V	308_P	0.536	0.17
276_N	328_M	0.535	0.17
18_V	100_D	0.535	0.17
17_K	270_K	0.535	0.17
384_V	437_I	0.533	0.17
31_F	180_L	0.532	0.17
61_A	351_S	0.532	0.17
150_M	176_V	0.531	0.17
91_A	98_K	0.530	0.17
180_L	208_L	0.530	0.17
296_G	338_G	0.530	0.17
117_T	418_A	0.530	0.17
29_L	41_G	0.529	0.17
382_D	441_Y	0.528	0.17
162_T	437_I	0.527	0.17
330_E	334_N	0.526	0.17
32_K	377_H	0.526	0.17
82_M	112_A	0.525	0.17
157_V	353_F	0.524	0.17
94_E	98_K	0.524	0.17
382_D	434_L	0.524	0.17
234_Q	337_L	0.523	0.17
242_K	353_F	0.523	0.17
50_R	189_E	0.521	0.17
91_A	359_I	0.520	0.17
179_G	286_E	0.519	0.17
49_L	342_L	0.518	0.17
236_L	384_V	0.518	0.17
90_E	138_N	0.518	0.17
306_G	328_M	0.518	0.17
80_K	127_M	0.517	0.17
245_T	307_H	0.517	0.17
326_L	329_Y	0.516	0.17
224_D	227_K	0.516	0.17
83_D	290_R	0.516	0.17
226_A	260_L	0.515	0.17
202_T	431_Q	0.514	0.16
38_E	213_D	0.513	0.16
251_T	309_L	0.513	0.16
70_A	426_N	0.513	0.16
284_T	417_Y	0.512	0.16
316_E	431_Q	0.512	0.16
20_Y	73_Q	0.510	0.16
58_T	170_A	0.510	0.16
39_V	46_K	0.510	0.16
60_T	79_Y	0.509	0.16
399_G	403_E	0.509	0.16
97_E	391_H	0.509	0.16
125_L	129_M	0.508	0.16
111_I	227_K	0.508	0.16
60_T	84_L	0.508	0.16
143_L	186_L	0.507	0.16
105_A	191_Y	0.507	0.16
103_F	187_G	0.507	0.16
153_N	175_Q	0.507	0.16
35_N	416_Q	0.506	0.16
79_Y	188_A	0.506	0.16
40_I	332_L	0.504	0.16
39_V	301_V	0.504	0.16
236_L	334_N	0.504	0.16
73_Q	77_D	0.503	0.16
390_Q	398_E	0.503	0.16
49_L	373_L	0.503	0.16
59_F	101_A	0.502	0.16
123_Q	381_E	0.502	0.16
50_R	209_K	0.501	0.16
374_K	378_K	0.500	0.16
82_M	348_V	0.500	0.16
149_N	310_L	0.500	0.16

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1a0cA	4	0.9798	100	0.486	Contact Map
1ximA	4	0.8539	100	0.705	Contact Map
1xlaA	4	0.8539	100	0.706	Contact Map
1muwA	4	0.8539	100	0.71	Contact Map
1bxbA	4	0.8539	100	0.726	Contact Map
3p14A	2	0.8629	100	0.735	Contact Map
3m0mA	4	0.8629	100	0.839	Contact Map
3ktcA	4	0.7371	100	0.844	Contact Map
1d8wA	4	0.8135	100	0.851	Contact Map
3cqjA	2	0.618	99.4	0.931	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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