DPO3X - BACSU - GREMLIN Contacts

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DPO3X - DNA polymerase III subunit gamma/tau

UniProt:	P09122	Sequences: MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGRMNKIVDAEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFSGDILKVEDALLITGAVSQLYIGKLAKSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPGLEGVLEKVKVDETFRELSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQTSHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIKAAAESPKKEAPRVPKGGKSNYKAPVGRIHEILKEATRPDLDLLRNSWGKLLAHLKQQNKVSHAALLNDSEPVAAGSAAFVLKFKYEIHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLEDHQQENEGSNEPAEEDPLIAEAKKLVGADLIEIKD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	563 (511)
Sequences:	3707 (2809)
Seq/√Len:	124.2

ECOLI - DPO3X
BACSU - DPO3X

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
260_N	263_D	5.861	1.00
188_N	200_E	5.690	1.00
197_Q	231_I	5.155	1.00
189_K	193_A	4.888	1.00
99_N	132_S	4.166	1.00
178_I	214_M	4.101	1.00
75_E	80_K	3.822	1.00
99_N	134_G	3.688	1.00
62_V	151_I	3.579	1.00
264_A	354_V	3.462	1.00
33_L	70_D	3.377	1.00
191_V	198_V	3.345	1.00
188_N	192_D	3.259	1.00
74_N	83_T	3.253	1.00
66_H	75_E	3.094	1.00
183_I	214_M	3.072	1.00
199_E	233_K	2.953	1.00
60_K	83_T	2.952	1.00
377_K	382_E	2.925	1.00
502_E	508_R	2.887	1.00
65_E	77_A	2.852	1.00
335_K	339_E	2.844	1.00
336_S	353_A	2.787	1.00
101_V	134_G	2.779	1.00
255_S	263_D	2.707	1.00
253_A	289_F	2.684	1.00
18_V	25_T	2.666	1.00
81_G	117_A	2.648	1.00
186_R	214_M	2.648	1.00
296_K	323_A	2.627	1.00
16_E	71_E	2.604	1.00
187_M	217_A	2.545	1.00
257_H	321_I	2.519	1.00
268_L	354_V	2.483	1.00
13_Q	83_T	2.480	1.00
22_E	182_A	2.466	1.00
87_I	118_V	2.410	1.00
18_V	54_A	2.402	1.00
101_V	132_S	2.308	1.00
377_K	381_L	2.296	1.00
14_R	17_D	2.264	1.00
16_E	29_Q	2.255	1.00
233_K	236_D	2.231	1.00
186_R	189_K	2.223	1.00
271_L	281_L	2.202	1.00
100_G	103_E	2.196	1.00
82_I	90_V	2.161	1.00
312_E	316_E	2.138	1.00
329_M	357_I	2.116	1.00
73_C	76_C	2.089	1.00
251_K	270_E	2.068	1.00
210_A	217_A	2.058	1.00
316_E	320_Q	2.015	1.00
268_L	350_F	1.999	1.00
234_V	238_L	1.996	1.00
72_P	76_C	1.994	1.00
371_V	374_L	1.992	1.00
307_K	311_D	1.984	1.00
78_A	118_V	1.982	1.00
120_Y	151_I	1.964	1.00
201_G	234_V	1.961	1.00
188_N	203_L	1.949	1.00
192_D	198_V	1.946	1.00
199_E	202_S	1.944	1.00
374_L	381_L	1.921	1.00
254_K	320_Q	1.920	1.00
64_C	76_C	1.914	1.00
199_E	231_I	1.888	1.00
256_L	357_I	1.871	1.00
64_C	73_C	1.870	1.00
370_E	375_M	1.865	1.00
196_L	225_I	1.859	1.00
255_S	267_T	1.837	1.00
472_A	512_I	1.820	1.00
254_K	313_T	1.807	1.00
269_N	273_Q	1.802	1.00
370_E	374_L	1.781	1.00
9_V	194_E	1.774	1.00
190_I	218_L	1.756	1.00
466_V	476_K	1.751	1.00
179_T	182_A	1.748	1.00
494_R	498_E	1.737	1.00
456_H	460_L	1.731	1.00
252_L	281_L	1.728	1.00
19_V	214_M	1.719	1.00
474_V	514_V	1.718	1.00
254_K	316_E	1.696	1.00
80_K	84_N	1.672	1.00
498_E	510_D	1.668	1.00
440_S	443_K	1.652	1.00
65_E	78_A	1.652	1.00
250_G	288_Y	1.651	1.00
252_L	264_A	1.639	1.00
99_N	103_E	1.639	1.00
254_K	317_L	1.597	1.00
378_I	381_L	1.586	1.00
374_L	377_K	1.584	1.00
288_Y	317_L	1.576	1.00
93_I	108_R	1.572	1.00
184_V	204_E	1.567	1.00
198_V	203_L	1.566	1.00
308_V	311_D	1.556	1.00
18_V	57_I	1.551	1.00
181_Q	185_G	1.549	1.00
81_G	87_I	1.547	1.00
381_L	384_E	1.531	1.00
177_R	211_D	1.528	1.00
44_S	174_D	1.520	1.00
484_K	487_A	1.509	1.00
498_E	508_R	1.496	1.00
259_K	325_A	1.496	1.00
101_V	138_A	1.490	1.00
374_L	378_I	1.490	1.00
66_H	69_V	1.490	1.00
484_K	488_E	1.481	1.00
93_I	103_E	1.480	1.00
467_A	474_V	1.473	1.00
289_F	326_L	1.466	1.00
289_F	333_L	1.461	1.00
267_T	270_E	1.441	1.00
261_V	358_C	1.427	1.00
312_E	315_R	1.426	1.00
469_G	472_A	1.425	1.00
99_N	125_I	1.423	1.00
67_A	70_D	1.414	1.00
184_V	203_L	1.393	1.00
258_D	320_Q	1.393	1.00
381_L	388_L	1.379	1.00
494_R	511_L	1.369	1.00
77_A	81_G	1.369	1.00
33_L	69_V	1.364	1.00
183_I	207_A	1.363	1.00
495_T	499_Q	1.351	1.00
333_L	357_I	1.347	1.00
95_A	154_L	1.341	1.00
100_G	134_G	1.340	1.00
292_M	326_L	1.336	1.00
191_V	221_L	1.336	1.00
322_P	325_A	1.330	1.00
483_C	487_A	1.330	1.00
381_L	385_V	1.310	1.00
10_F	193_A	1.308	1.00
77_A	80_K	1.304	1.00
104_I	135_A	1.298	1.00
384_E	389_K	1.296	1.00
225_I	232_L	1.296	1.00
210_A	213_G	1.294	1.00
253_A	288_Y	1.287	1.00
286_I	333_L	1.284	1.00
472_A	510_D	1.282	1.00
434_L	465_P	1.280	1.00
184_V	188_N	1.277	1.00
368_L	372_D	1.268	1.00
501_L	509_M	1.267	1.00
103_E	134_G	1.265	1.00
37_F	151_I	1.260	1.00
451_Q	503_S	1.256	1.00
19_V	186_R	1.251	1.00
254_K	258_D	1.248	1.00
372_D	377_K	1.244	1.00
474_V	512_I	1.237	0.99
306_E	311_D	1.213	0.99
7_Y	49_T	1.212	0.99
347_R	351_E	1.205	0.99
447_H	504_M	1.204	0.99
78_A	87_I	1.203	0.99
370_E	373_M	1.193	0.99
101_V	104_I	1.189	0.99
98_N	104_I	1.189	0.99
463_S	477_F	1.188	0.99
315_R	319_E	1.185	0.99
103_E	132_S	1.183	0.99
100_G	111_V	1.181	0.99
372_D	375_M	1.174	0.99
235_E	239_L	1.173	0.99
379_Q	383_Q	1.170	0.99
269_N	347_R	1.168	0.99
384_E	388_L	1.164	0.99
321_I	326_L	1.161	0.99
98_N	135_A	1.159	0.99
272_L	278_P	1.152	0.99
111_V	142_T	1.146	0.99
111_V	123_Y	1.144	0.99
98_N	103_E	1.140	0.99
192_D	197_Q	1.134	0.99
99_N	108_R	1.133	0.99
46_P	213_G	1.132	0.99
463_S	475_L	1.129	0.99
436_L	440_S	1.119	0.99
106_D	139_L	1.115	0.99
91_I	121_K	1.113	0.99
477_F	486_V	1.113	0.99
456_H	459_L	1.112	0.99
189_K	192_D	1.111	0.99
420_G	426_L	1.111	0.99
499_Q	503_S	1.109	0.99
202_S	237_A	1.105	0.99
64_C	72_P	1.092	0.99
258_D	263_D	1.091	0.99
90_V	124_I	1.090	0.99
325_A	329_M	1.086	0.99
371_V	375_M	1.077	0.99
185_G	188_N	1.077	0.99
439_N	442_G	1.075	0.99
316_E	319_E	1.074	0.99
64_C	79_C	1.072	0.99
249_I	288_Y	1.070	0.98
444_L	504_M	1.066	0.98
44_S	172_R	1.062	0.98
22_E	185_G	1.059	0.98
388_L	391_T	1.054	0.98
498_E	502_E	1.053	0.98
81_G	84_N	1.050	0.98
332_I	356_K	1.047	0.98
372_D	376_K	1.043	0.98
278_P	350_F	1.042	0.98
376_K	379_Q	1.039	0.98
438_R	464_E	1.039	0.98
368_L	371_V	1.036	0.98
455_S	460_L	1.034	0.98
106_D	110_K	1.034	0.98
368_L	373_M	1.032	0.98
382_E	385_V	1.029	0.98
104_I	108_R	1.027	0.98
500_I	504_M	1.023	0.98
388_L	394_K	1.021	0.98
412_K	416_K	1.018	0.98
417_A	421_R	1.016	0.98
6_L	218_L	1.016	0.98
99_N	105_R	1.013	0.98
191_V	203_L	1.008	0.98
186_R	218_L	1.008	0.98
367_D	375_M	1.007	0.98
251_K	313_T	1.006	0.98
447_H	503_S	1.006	0.98
76_C	79_C	1.002	0.98
411_G	415_Y	0.999	0.98
290_R	351_E	0.988	0.97
251_K	267_T	0.984	0.97
77_A	117_A	0.979	0.97
287_F	291_D	0.979	0.97
416_K	422_I	0.978	0.97
369_P	375_M	0.978	0.97
460_L	497_L	0.976	0.97
10_F	194_E	0.971	0.97
109_D	113_F	0.970	0.97
378_I	382_E	0.967	0.97
49_T	56_K	0.966	0.97
263_D	267_T	0.964	0.97
128_V	160_H	0.964	0.97
214_M	217_A	0.962	0.97
454_V	460_L	0.956	0.97
505_L	509_M	0.954	0.97
17_D	189_K	0.953	0.97
444_L	501_L	0.953	0.97
328_E	360_T	0.951	0.97
375_M	379_Q	0.950	0.97
437_L	473_F	0.948	0.97
436_L	439_N	0.947	0.97
100_G	104_I	0.947	0.97
31_A	46_P	0.945	0.97
22_E	26_K	0.945	0.97
377_K	380_Q	0.944	0.97
200_E	204_E	0.944	0.97
7_Y	56_K	0.944	0.97
91_I	123_Y	0.940	0.97
183_I	187_M	0.939	0.97
296_K	319_E	0.939	0.97
46_P	113_F	0.937	0.97
375_M	382_E	0.936	0.96
495_T	498_E	0.932	0.96
266_E	270_E	0.930	0.96
188_N	198_V	0.922	0.96
456_H	486_V	0.922	0.96
178_I	182_A	0.915	0.96
313_T	316_E	0.915	0.96
262_S	300_G	0.914	0.96
385_V	389_K	0.913	0.96
93_I	100_G	0.912	0.96
368_L	376_K	0.909	0.96
369_P	372_D	0.906	0.96
489_D	495_T	0.905	0.96
13_Q	17_D	0.904	0.96
33_L	71_E	0.899	0.96
58_F	153_I	0.897	0.96
338_Q	342_W	0.895	0.95
114_A	149_H	0.894	0.95
29_Q	70_D	0.894	0.95
17_D	186_R	0.892	0.95
205_I	234_V	0.891	0.95
250_G	313_T	0.891	0.95
187_M	203_L	0.887	0.95
499_Q	502_E	0.885	0.95
439_N	443_K	0.883	0.95
422_I	430_T	0.881	0.95
108_R	134_G	0.877	0.95
97_S	130_M	0.875	0.95
471_A	507_K	0.874	0.95
422_I	425_I	0.874	0.95
468_A	473_F	0.873	0.95
252_L	354_V	0.870	0.95
131_L	135_A	0.870	0.95
412_K	415_Y	0.869	0.95
412_K	418_P	0.867	0.95
286_I	330_I	0.864	0.95
102_D	134_G	0.863	0.94
190_I	193_A	0.861	0.94
305_L	311_D	0.860	0.94
331_D	335_K	0.857	0.94
43_F	175_F	0.857	0.94
44_S	159_P	0.855	0.94
397_A	402_K	0.855	0.94
289_F	329_M	0.851	0.94
54_A	175_F	0.850	0.94
371_V	381_L	0.849	0.94
29_Q	71_E	0.847	0.94
98_N	111_V	0.846	0.94
292_M	317_L	0.845	0.94
122_V	151_I	0.844	0.94
386_E	389_K	0.842	0.94
253_A	256_L	0.842	0.94
198_V	232_L	0.842	0.94
111_V	150_C	0.842	0.94
251_K	263_D	0.840	0.94
185_G	189_K	0.839	0.94
440_S	444_L	0.836	0.93
68_P	120_Y	0.833	0.93
34_Q	37_F	0.832	0.93
263_D	266_E	0.829	0.93
399_S	403_E	0.829	0.93
378_I	384_E	0.828	0.93
292_M	314_F	0.826	0.93
457_A	460_L	0.823	0.93
471_A	510_D	0.822	0.93
335_K	338_Q	0.820	0.93
67_A	119_T	0.820	0.93
464_E	476_K	0.818	0.93
380_Q	383_Q	0.816	0.93
264_A	355_V	0.814	0.93
416_K	421_R	0.814	0.93
411_G	416_K	0.814	0.93
43_F	58_F	0.811	0.92
426_L	429_A	0.810	0.92
38_S	171_Q	0.809	0.92
398_E	404_A	0.808	0.92
373_M	386_E	0.807	0.92
497_L	513_G	0.807	0.92
454_V	457_A	0.806	0.92
380_Q	395_A	0.806	0.92
102_D	133_I	0.801	0.92
370_E	390_T	0.801	0.92
57_I	83_T	0.801	0.92
399_S	404_A	0.800	0.92
487_A	494_R	0.800	0.92
411_G	417_A	0.799	0.92
159_P	162_I	0.798	0.92
379_Q	382_E	0.797	0.92
249_I	285_M	0.794	0.92
417_A	423_H	0.794	0.92
25_T	54_A	0.791	0.91
478_K	516_E	0.791	0.91
385_V	388_L	0.789	0.91
183_I	217_A	0.788	0.91
434_L	437_L	0.788	0.91
388_L	392_G	0.787	0.91
93_I	104_I	0.786	0.91
26_K	236_D	0.785	0.91
124_I	135_A	0.785	0.91
142_T	150_C	0.783	0.91
415_Y	419_V	0.783	0.91
413_S	417_A	0.783	0.91
410_G	414_N	0.782	0.91
500_I	503_S	0.780	0.91
305_L	308_V	0.779	0.91
423_H	426_L	0.776	0.91
167_I	172_R	0.774	0.91
108_R	112_K	0.770	0.90
295_Y	314_F	0.768	0.90
159_P	174_D	0.766	0.90
443_K	446_A	0.766	0.90
99_N	133_I	0.765	0.90
93_I	110_K	0.764	0.90
128_V	136_F	0.762	0.90
421_R	424_E	0.762	0.90
181_Q	204_E	0.760	0.90
42_L	159_P	0.758	0.90
270_E	273_Q	0.758	0.90
373_M	380_Q	0.758	0.90
224_A	240_I	0.756	0.90
376_K	380_Q	0.756	0.90
191_V	225_I	0.755	0.89
470_S	507_K	0.754	0.89
49_T	172_R	0.754	0.89
377_K	388_L	0.753	0.89
332_I	357_I	0.751	0.89
375_M	380_Q	0.751	0.89
400_P	403_E	0.751	0.89
414_N	420_G	0.750	0.89
118_V	210_A	0.750	0.89
433_D	436_L	0.745	0.89
283_E	337_H	0.745	0.89
399_S	410_G	0.745	0.89
383_Q	386_E	0.745	0.89
8_R	39_H	0.742	0.89
419_V	423_H	0.740	0.89
448_L	460_L	0.740	0.89
426_L	430_T	0.739	0.88
396_A	405_P	0.739	0.88
99_N	112_K	0.738	0.88
399_S	402_K	0.738	0.88
37_F	120_Y	0.735	0.88
480_E	484_K	0.734	0.88
374_L	380_Q	0.732	0.88
445_L	477_F	0.730	0.88
118_V	128_V	0.727	0.88
368_L	381_L	0.727	0.88
30_N	33_L	0.724	0.87
411_G	421_R	0.723	0.87
306_E	309_K	0.723	0.87
368_L	388_L	0.719	0.87
422_I	428_E	0.719	0.87
261_V	355_V	0.718	0.87
256_L	329_M	0.718	0.87
114_A	148_E	0.718	0.87
368_L	382_E	0.717	0.87
410_G	416_K	0.717	0.87
468_A	509_M	0.715	0.87
392_G	395_A	0.715	0.87
268_L	347_R	0.715	0.87
49_T	276_K	0.714	0.87
485_M	488_E	0.713	0.87
104_I	131_L	0.712	0.87
64_C	74_N	0.706	0.86
290_R	293_L	0.706	0.86
108_R	163_P	0.705	0.86
465_P	475_L	0.704	0.86
434_L	438_R	0.704	0.86
501_L	505_L	0.703	0.86
405_P	413_S	0.701	0.86
369_P	373_M	0.701	0.86
387_R	405_P	0.700	0.86
370_E	380_Q	0.700	0.86
435_D	438_R	0.699	0.86
28_L	58_F	0.698	0.85
396_A	402_K	0.696	0.85
376_K	382_E	0.696	0.85
213_G	223_Q	0.694	0.85
367_D	377_K	0.694	0.85
424_E	427_K	0.694	0.85
521_K	524_E	0.692	0.85
37_F	62_V	0.691	0.85
465_P	473_F	0.691	0.85
447_H	451_Q	0.690	0.85
328_E	332_I	0.689	0.85
373_M	378_I	0.685	0.84
217_A	221_L	0.684	0.84
219_S	222_D	0.683	0.84
27_T	171_Q	0.683	0.84
199_E	234_V	0.682	0.84
370_E	376_K	0.682	0.84
373_M	377_K	0.681	0.84
389_K	392_G	0.681	0.84
425_I	430_T	0.681	0.84
372_D	378_I	0.679	0.84
441_W	448_L	0.679	0.84
159_P	172_R	0.677	0.84
385_V	391_T	0.677	0.84
437_L	465_P	0.675	0.84
416_K	420_G	0.675	0.84
259_K	361_S	0.675	0.84
128_V	162_I	0.674	0.83
61_A	69_V	0.673	0.83
199_E	235_E	0.673	0.83
367_D	372_D	0.673	0.83
409_K	412_K	0.672	0.83
394_K	402_K	0.672	0.83
396_A	404_A	0.671	0.83
466_V	474_V	0.669	0.83
19_V	185_G	0.668	0.83
175_F	290_R	0.668	0.83
483_C	488_E	0.668	0.83
256_L	354_V	0.668	0.83
389_K	401_K	0.666	0.83
54_A	232_L	0.666	0.83
27_T	174_D	0.665	0.83
415_Y	421_R	0.665	0.83
421_R	425_I	0.662	0.82
409_K	413_S	0.662	0.82
192_D	195_Q	0.661	0.82
384_E	396_A	0.661	0.82
299_P	302_E	0.661	0.82
367_D	370_E	0.660	0.82
369_P	382_E	0.659	0.82
103_E	158_E	0.659	0.82
393_I	397_A	0.657	0.82
368_L	374_L	0.657	0.82
56_K	186_R	0.656	0.82
122_V	154_L	0.655	0.82
410_G	415_Y	0.655	0.82
285_M	333_L	0.653	0.81
375_M	390_T	0.652	0.81
319_E	376_K	0.651	0.81
444_L	448_L	0.651	0.81
14_R	71_E	0.651	0.81
381_L	387_R	0.650	0.81
375_M	381_L	0.650	0.81
373_M	391_T	0.650	0.81
448_L	496_N	0.650	0.81
4_Q	41_Y	0.649	0.81
367_D	371_V	0.648	0.81
100_G	132_S	0.647	0.81
5_A	8_R	0.647	0.81
7_Y	95_A	0.647	0.81
104_I	134_G	0.645	0.81
367_D	380_Q	0.645	0.81
424_E	428_E	0.643	0.80
69_V	119_T	0.642	0.80
5_A	38_S	0.640	0.80
280_K	284_D	0.639	0.80
416_K	419_V	0.638	0.80
293_L	297_T	0.638	0.80
27_T	38_S	0.636	0.80
187_M	218_L	0.636	0.80
443_K	504_M	0.636	0.80
379_Q	389_K	0.635	0.80
256_L	475_L	0.635	0.80
73_C	79_C	0.633	0.79
389_K	395_A	0.633	0.79
19_V	189_K	0.633	0.79
422_I	426_L	0.632	0.79
423_H	427_K	0.632	0.79
373_M	376_K	0.631	0.79
19_V	178_I	0.630	0.79
247_L	313_T	0.629	0.79
202_S	233_K	0.628	0.79
293_L	326_L	0.626	0.79
175_F	291_D	0.622	0.78
387_R	390_T	0.619	0.78
333_L	353_A	0.619	0.78
100_G	108_R	0.618	0.78
99_N	107_I	0.618	0.78
410_G	418_P	0.615	0.77
309_K	312_E	0.614	0.77
276_K	281_L	0.614	0.77
496_N	499_Q	0.614	0.77
65_E	119_T	0.612	0.77
374_L	382_E	0.611	0.77
473_F	501_L	0.611	0.77
392_G	398_E	0.611	0.77
60_K	85_G	0.610	0.77
18_V	23_H	0.610	0.77
62_V	69_V	0.609	0.77
98_N	108_R	0.609	0.77
412_K	419_V	0.606	0.76
457_A	461_N	0.604	0.76
485_M	489_D	0.604	0.76
402_K	405_P	0.604	0.76
209_A	213_G	0.604	0.76
473_F	511_L	0.602	0.76
295_Y	315_R	0.602	0.76
197_Q	258_D	0.602	0.76
146_P	157_T	0.600	0.76
385_V	392_G	0.599	0.76
381_L	386_E	0.599	0.76
252_L	267_T	0.599	0.76
55_A	124_I	0.598	0.76
135_A	142_T	0.598	0.76
373_M	382_E	0.598	0.76
89_D	165_T	0.597	0.75
367_D	376_K	0.597	0.75
406_R	410_G	0.597	0.75
49_T	221_L	0.597	0.75
164_L	213_G	0.596	0.75
36_K	213_G	0.596	0.75
248_Y	267_T	0.596	0.75
382_E	389_K	0.595	0.75
98_N	102_D	0.592	0.75
426_L	431_R	0.592	0.75
368_L	383_Q	0.591	0.75
400_P	404_A	0.591	0.75
16_E	57_I	0.590	0.75
367_D	378_I	0.590	0.75
100_G	135_A	0.590	0.75
12_P	186_R	0.587	0.74
253_A	317_L	0.587	0.74
327_Y	331_D	0.586	0.74
10_F	190_I	0.585	0.74
291_D	294_L	0.585	0.74
477_F	513_G	0.585	0.74
170_C	191_V	0.585	0.74
209_A	241_T	0.584	0.74
186_R	190_I	0.584	0.74
177_R	277_D	0.583	0.74
343_T	350_F	0.583	0.74
282_I	336_S	0.583	0.74
95_A	122_V	0.582	0.74
123_Y	207_A	0.582	0.74
136_F	139_L	0.581	0.73
391_T	415_Y	0.581	0.73
61_A	163_P	0.579	0.73
264_A	358_C	0.578	0.73
393_I	406_R	0.578	0.73
389_K	393_I	0.578	0.73
250_G	254_K	0.578	0.73
307_K	310_V	0.577	0.73
293_L	323_A	0.577	0.73
83_T	90_V	0.576	0.73
115_P	149_H	0.576	0.73
6_L	15_F	0.574	0.73
449_K	491_N	0.574	0.73
163_P	213_G	0.574	0.73
397_A	404_A	0.572	0.72
424_E	431_R	0.572	0.72
451_Q	454_V	0.572	0.72
441_W	445_L	0.571	0.72
487_A	491_N	0.571	0.72
266_E	269_N	0.571	0.72
180_S	184_V	0.570	0.72
405_P	414_N	0.570	0.72
429_A	432_P	0.570	0.72
420_G	424_E	0.570	0.72
418_P	421_R	0.569	0.72
182_A	189_K	0.569	0.72
4_Q	9_V	0.568	0.72
184_V	207_A	0.566	0.71
270_E	274_Q	0.566	0.71
367_D	374_L	0.565	0.71
397_A	400_P	0.564	0.71
449_K	454_V	0.564	0.71
68_P	119_T	0.563	0.71
90_V	93_I	0.562	0.71
395_A	400_P	0.559	0.71
96_A	165_T	0.558	0.70
373_M	381_L	0.558	0.70
404_A	416_K	0.558	0.70
93_I	98_N	0.558	0.70
276_K	347_R	0.558	0.70
440_S	505_L	0.557	0.70
387_R	392_G	0.557	0.70
417_A	425_I	0.556	0.70
94_D	165_T	0.555	0.70
423_H	429_A	0.555	0.70
393_I	423_H	0.554	0.70
224_A	232_L	0.554	0.70
197_Q	230_D	0.554	0.70
198_V	202_S	0.554	0.70
480_E	483_C	0.554	0.70
390_T	424_E	0.553	0.70
415_Y	426_L	0.553	0.70
413_S	424_E	0.552	0.70
422_I	431_R	0.552	0.70
151_I	164_L	0.552	0.70
379_Q	386_E	0.551	0.69
436_L	443_K	0.551	0.69
265_L	294_L	0.551	0.69
386_E	395_A	0.550	0.69
202_S	224_A	0.549	0.69
371_V	401_K	0.548	0.69
395_A	401_K	0.547	0.69
427_K	431_R	0.546	0.69
82_I	85_G	0.546	0.69
502_E	514_V	0.545	0.69
124_I	153_I	0.545	0.69
405_P	417_A	0.544	0.68
6_L	225_I	0.543	0.68
511_L	514_V	0.543	0.68
399_S	411_G	0.543	0.68
516_E	519_W	0.542	0.68
390_T	398_E	0.541	0.68
42_L	162_I	0.540	0.68
384_E	387_R	0.540	0.68
43_F	107_I	0.539	0.68
17_D	153_I	0.539	0.68
378_I	386_E	0.539	0.68
327_Y	355_V	0.539	0.68
375_M	378_I	0.539	0.68
208_S	287_F	0.538	0.68
7_Y	39_H	0.538	0.68
101_V	133_I	0.538	0.68
405_P	409_K	0.537	0.68
378_I	383_Q	0.537	0.68
53_S	190_I	0.536	0.67
378_I	388_L	0.532	0.67
419_V	428_E	0.532	0.67
73_C	80_K	0.531	0.67
374_L	379_Q	0.530	0.67
391_T	395_A	0.529	0.66
26_K	30_N	0.528	0.66
446_A	450_Q	0.528	0.66
418_P	424_E	0.528	0.66
397_A	406_R	0.528	0.66
462_D	477_F	0.528	0.66
93_I	123_Y	0.527	0.66
157_T	165_T	0.527	0.66
476_K	514_V	0.527	0.66
377_K	385_V	0.527	0.66
40_A	130_M	0.526	0.66
387_R	402_K	0.526	0.66
390_T	404_A	0.526	0.66
387_R	404_A	0.525	0.66
375_M	388_L	0.525	0.66
170_C	237_A	0.524	0.66
29_Q	33_L	0.523	0.65
378_I	399_S	0.523	0.65
366_A	378_I	0.523	0.65
5_A	218_L	0.523	0.65
413_S	419_V	0.522	0.65
391_T	406_R	0.521	0.65
160_H	170_C	0.520	0.65
71_E	74_N	0.520	0.65
373_M	384_E	0.519	0.65
187_M	221_L	0.518	0.65
437_L	441_W	0.518	0.65
371_V	376_K	0.518	0.65
184_V	200_E	0.517	0.65
5_A	222_D	0.517	0.65
73_C	78_A	0.516	0.64
125_I	136_F	0.516	0.64
238_L	243_A	0.516	0.64
3_Y	8_R	0.516	0.64
209_A	224_A	0.516	0.64
109_D	209_A	0.515	0.64
248_Y	281_L	0.515	0.64
441_W	475_L	0.515	0.64
187_M	190_I	0.515	0.64
140_L	156_T	0.515	0.64
60_K	82_I	0.515	0.64
522_I	525_E	0.514	0.64
390_T	394_K	0.513	0.64
88_S	116_S	0.513	0.64
398_E	422_I	0.513	0.64
57_I	222_D	0.513	0.64
260_N	266_E	0.512	0.64
459_L	462_D	0.512	0.64
154_L	176_K	0.511	0.64
375_M	392_G	0.511	0.64
38_S	213_G	0.509	0.63
114_A	220_L	0.509	0.63
7_Y	38_S	0.509	0.63
136_F	163_P	0.509	0.63
27_T	173_F	0.508	0.63
129_H	165_T	0.508	0.63
43_F	164_L	0.507	0.63
139_L	351_E	0.507	0.63
495_T	502_E	0.506	0.63
178_I	186_R	0.506	0.63
153_I	175_F	0.505	0.63
30_N	123_Y	0.505	0.63
183_I	186_R	0.504	0.63
65_E	69_V	0.504	0.63
211_D	292_M	0.504	0.63
455_S	458_A	0.504	0.63
256_L	289_F	0.503	0.63
367_D	381_L	0.503	0.63
371_V	377_K	0.503	0.63
380_Q	388_L	0.503	0.63
405_P	425_I	0.503	0.63
105_R	139_L	0.502	0.62
445_L	500_I	0.502	0.62
196_L	358_C	0.501	0.62
128_V	131_L	0.501	0.62
483_C	515_P	0.501	0.62
376_K	398_E	0.500	0.62
77_A	118_V	0.500	0.62
414_N	418_P	0.500	0.62
370_E	388_L	0.500	0.62

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1jr3A	3	0.6501	100	0.6	Contact Map
1sxjC	1	0.5577	100	0.652	Contact Map
1sxjD	1	0.5524	100	0.657	Contact Map
1iqpA	5	0.5595	100	0.661	Contact Map
2chqA	3	0.5506	100	0.665	Contact Map
1sxjE	1	0.5435	100	0.669	Contact Map
1a5tA	2	0.5666	100	0.678	Contact Map
1jr3D	1	0.5702	100	0.695	Contact Map
3zh9B	1	0.5595	100	0.703	Contact Map
3u61B	3	0.54	100	0.705	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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