AK2 - BACSU - GREMLIN Contacts

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AK2 - Aspartokinase 2

UniProt:	P08495	Sequences: MGLIVQKFGGTSVGSVEKIQNAANRAIAEKQKGHQVVVVVSAMGKSTDELVSLAKAISDQPSKREMDMLLATGEQVTISLLSMALQEKGYDAVSYTGWQAGIRTEAIHGNARITDIDTSVLADQLEKGKIVIVAGFQGMTEDCEITTLGRGGSDTTAVALAAALKADKCDIYTDVPGVFTTDPRYVKSARKLEGISYDEMLELANLGAGVLHPRAVEFAKNYQVPLEVRSSTETEAGTLIEEESSMEQNLIVRGIAFEDQITRVTIYGLTSGLTTLSTIFTTLAKRNINVDIIIQTQAEDKTGISFSVKTEDADQTVAVLEEYKDALEFEKIETESKLAKVSIVGSGMVSNPGVAAEMFAVLAQKNILIKMVSTSEIKVSTVVSENDMVKAVESLHDAFELSKHPSAV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	408 (391)
Sequences:	4806 (2707)
Seq/√Len:	136.9

ECOLI - AK1H AK2H AK3
BACSU - AK2 AK1 AK3
HALSA - Q9HMV1
SULSO - Q97ZL7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
90_Y	130_I	4.284	1.00
91_D	129_K	4.010	1.00
357_E	398_A	3.946	1.00
140_T	144_E	3.823	1.00
387_D	390_K	3.638	1.00
37_V	164_L	3.434	1.00
133_V	160_L	3.230	1.00
161_A	169_C	3.198	1.00
40_V	78_I	2.922	1.00
203_L	344_V	2.850	1.00
95_Y	124_Q	2.834	1.00
360_A	364_Q	2.825	1.00
27_I	88_K	2.738	1.00
262_T	310_T	2.647	1.00
82_S	92_A	2.586	1.00
20_Q	88_K	2.566	1.00
168_K	227_E	2.564	1.00
194_G	241_E	2.543	1.00
227_E	239_L	2.541	1.00
22_A	81_L	2.534	1.00
176_P	233_E	2.509	1.00
21_N	24_N	2.499	1.00
257_F	388_M	2.458	1.00
337_K	385_E	2.437	1.00
24_N	88_K	2.391	1.00
281_T	285_K	2.332	1.00
278_T	326_A	2.268	1.00
27_I	90_Y	2.235	1.00
93_V	129_K	2.233	1.00
198_D	220_K	2.227	1.00
317_V	321_E	2.184	1.00
78_I	134_A	2.166	1.00
341_V	395_L	2.155	1.00
26_A	38_V	2.151	1.00
11_T	14_G	2.134	1.00
259_D	389_V	2.115	1.00
46_S	49_E	2.105	1.00
106_A	140_T	2.070	1.00
51_V	66_M	2.017	1.00
52_S	56_A	1.989	1.00
104_T	146_T	1.977	1.00
348_M	353_G	1.973	1.00
51_V	70_L	1.964	1.00
188_S	397_D	1.954	1.00
193_E	236_A	1.949	1.00
28_A	234_T	1.911	1.00
86_Q	91_D	1.908	1.00
313_A	334_T	1.884	1.00
119_S	123_D	1.822	1.00
71_A	145_I	1.810	1.00
19_I	81_L	1.798	1.00
11_T	44_G	1.796	1.00
165_K	222_Y	1.765	1.00
365_K	390_K	1.748	1.00
170_D	227_E	1.742	1.00
259_D	385_E	1.737	1.00
27_I	130_I	1.734	1.00
30_K	35_Q	1.714	1.00
27_I	85_L	1.713	1.00
118_T	122_A	1.708	1.00
40_V	81_L	1.707	1.00
67_D	109_G	1.703	1.00
384_S	387_D	1.698	1.00
160_L	164_L	1.698	1.00
219_A	226_L	1.695	1.00
285_K	322_E	1.693	1.00
223_Q	242_E	1.687	1.00
26_A	85_L	1.683	1.00
158_V	169_C	1.683	1.00
192_L	195_I	1.674	1.00
390_K	393_E	1.668	1.00
54_A	66_M	1.658	1.00
24_N	27_I	1.647	1.00
121_L	131_V	1.630	1.00
310_T	336_S	1.618	1.00
362_L	391_A	1.611	1.00
364_Q	398_A	1.595	1.00
37_V	133_V	1.591	1.00
45_K	209_G	1.581	1.00
93_V	131_V	1.562	1.00
120_V	124_Q	1.554	1.00
321_E	324_K	1.540	1.00
176_P	179_F	1.538	1.00
29_E	170_D	1.535	1.00
173_T	228_V	1.529	1.00
276_L	304_I	1.505	1.00
8_F	25_R	1.487	1.00
277_S	284_A	1.485	1.00
368_L	372_V	1.484	1.00
66_M	70_L	1.464	1.00
84_A	88_K	1.455	1.00
255_I	392_V	1.440	1.00
51_V	55_K	1.429	1.00
98_W	145_I	1.426	1.00
113_I	159_A	1.424	1.00
25_R	234_T	1.416	1.00
23_A	88_K	1.411	1.00
361_V	398_A	1.408	1.00
18_K	21_N	1.394	1.00
365_K	394_S	1.382	1.00
30_K	90_Y	1.371	1.00
339_A	388_M	1.365	1.00
20_Q	87_E	1.352	1.00
358_M	381_T	1.338	1.00
64_R	144_E	1.335	1.00
181_T	257_F	1.334	1.00
34_H	167_D	1.320	1.00
358_M	395_L	1.320	1.00
170_D	229_R	1.309	1.00
262_T	313_A	1.298	1.00
21_N	231_S	1.295	1.00
44_G	48_D	1.292	1.00
72_T	76_V	1.290	1.00
19_I	84_A	1.286	1.00
24_N	28_A	1.280	1.00
341_V	392_V	1.260	1.00
45_K	49_E	1.259	1.00
269_L	274_T	1.253	1.00
4_I	34_H	1.253	1.00
264_V	316_T	1.250	1.00
292_I	382_V	1.249	1.00
104_T	138_G	1.244	1.00
54_A	69_L	1.240	1.00
30_K	130_I	1.238	1.00
176_P	230_S	1.238	1.00
310_T	385_E	1.236	1.00
39_V	160_L	1.234	1.00
69_L	79_S	1.218	1.00
123_D	127_K	1.217	1.00
95_Y	131_V	1.214	1.00
122_A	126_E	1.213	1.00
35_Q	126_E	1.212	1.00
286_R	315_Q	1.208	1.00
97_G	100_A	1.206	1.00
266_I	279_I	1.198	1.00
14_G	44_G	1.190	1.00
341_V	391_A	1.188	1.00
6_Q	29_E	1.184	1.00
361_V	394_S	1.183	1.00
116_I	120_V	1.181	0.99
85_L	90_Y	1.179	0.99
317_V	334_T	1.177	0.99
329_F	332_I	1.177	0.99
111_A	146_T	1.170	0.99
108_H	111_A	1.170	0.99
91_D	128_G	1.167	0.99
389_V	393_E	1.161	0.99
121_L	160_L	1.159	0.99
169_C	219_A	1.159	0.99
3_L	167_D	1.152	0.99
263_R	370_K	1.147	0.99
123_D	126_E	1.146	0.99
180_T	396_H	1.145	0.99
23_A	84_A	1.142	0.99
12_S	231_S	1.132	0.99
15_S	18_K	1.128	0.99
106_A	142_D	1.127	0.99
185_Y	392_V	1.121	0.99
23_A	27_I	1.116	0.99
62_S	86_Q	1.113	0.99
96_T	101_G	1.109	0.99
103_R	139_M	1.108	0.99
27_I	30_K	1.107	0.99
29_E	36_V	1.104	0.99
318_A	322_E	1.103	0.99
286_R	322_E	1.100	0.99
63_K	109_G	1.098	0.99
337_K	384_S	1.094	0.99
103_R	141_E	1.094	0.99
176_P	235_E	1.091	0.99
58_S	87_E	1.080	0.99
181_T	392_V	1.077	0.99
98_W	139_M	1.076	0.99
262_T	336_S	1.075	0.99
11_T	173_T	1.069	0.99
102_I	156_T	1.062	0.99
168_K	239_L	1.061	0.99
282_T	323_Y	1.059	0.99
25_R	231_S	1.047	0.99
260_Q	310_T	1.046	0.99
162_A	224_V	1.044	0.99
282_T	319_V	1.043	0.99
26_A	130_I	1.040	0.99
16_V	20_Q	1.039	0.99
52_S	55_K	1.039	0.99
22_A	26_A	1.039	0.99
360_A	398_A	1.038	0.99
195_I	253_R	1.034	0.99
348_M	354_V	1.019	0.98
85_L	132_I	1.017	0.98
370_K	384_S	1.017	0.98
71_A	75_Q	1.015	0.98
324_K	329_F	1.012	0.98
397_D	401_L	1.011	0.98
314_D	336_S	1.003	0.98
11_T	45_K	1.002	0.98
83_M	86_Q	0.998	0.98
110_N	312_D	0.996	0.98
267_Y	331_K	0.990	0.98
258_E	261_I	0.986	0.98
265_T	305_S	0.983	0.98
194_G	239_L	0.982	0.98
274_T	368_L	0.975	0.98
291_D	307_S	0.971	0.98
46_S	76_V	0.968	0.98
211_L	240_I	0.963	0.98
367_I	391_A	0.962	0.98
18_K	231_S	0.957	0.98
318_A	321_E	0.954	0.98
105_E	111_A	0.953	0.98
55_K	66_M	0.950	0.98
282_T	286_R	0.946	0.98
4_I	168_K	0.945	0.98
20_Q	84_A	0.944	0.98
321_E	331_K	0.941	0.97
120_V	123_D	0.938	0.97
26_A	132_I	0.936	0.97
268_G	330_E	0.936	0.97
122_A	165_K	0.935	0.97
106_A	111_A	0.933	0.97
82_S	86_Q	0.932	0.97
97_G	134_A	0.928	0.97
343_I	358_M	0.923	0.97
175_V	210_V	0.922	0.97
114_T	141_E	0.922	0.97
276_L	295_Q	0.921	0.97
288_I	319_V	0.913	0.97
339_A	385_E	0.913	0.97
26_A	81_L	0.911	0.97
276_L	293_I	0.909	0.97
279_I	304_I	0.907	0.97
108_H	140_T	0.906	0.97
53_L	57_I	0.903	0.97
280_F	290_V	0.902	0.97
78_I	94_S	0.900	0.97
342_S	380_S	0.899	0.97
259_D	388_M	0.898	0.97
6_Q	170_D	0.895	0.97
179_F	189_A	0.890	0.96
18_K	232_T	0.889	0.96
335_E	370_K	0.887	0.96
288_I	315_Q	0.884	0.96
156_T	160_L	0.882	0.96
82_S	94_S	0.882	0.96
124_Q	129_K	0.880	0.96
29_E	34_H	0.877	0.96
13_V	40_V	0.877	0.96
353_G	376_E	0.877	0.96
291_D	340_K	0.876	0.96
283_L	290_V	0.875	0.96
279_I	323_Y	0.873	0.96
341_V	383_V	0.872	0.96
292_I	380_S	0.871	0.96
3_L	35_Q	0.866	0.96
23_A	81_L	0.863	0.96
251_I	354_V	0.858	0.96
355_A	359_F	0.856	0.96
67_D	147_T	0.854	0.96
13_V	77_T	0.854	0.96
3_L	34_H	0.852	0.95
337_K	386_N	0.850	0.95
309_K	312_D	0.848	0.95
185_Y	257_F	0.847	0.95
111_A	114_T	0.842	0.95
397_D	400_E	0.842	0.95
19_I	43_M	0.839	0.95
140_T	146_T	0.838	0.95
367_I	394_S	0.837	0.95
349_V	376_E	0.837	0.95
42_A	47_T	0.837	0.95
117_D	122_A	0.834	0.95
37_V	131_V	0.834	0.95
37_V	160_L	0.832	0.95
81_L	132_I	0.831	0.95
30_K	91_D	0.831	0.95
104_T	108_H	0.831	0.95
186_V	392_V	0.827	0.95
257_F	392_V	0.826	0.95
37_V	125_L	0.825	0.95
269_L	275_T	0.821	0.94
3_L	6_Q	0.819	0.94
35_Q	129_K	0.815	0.94
11_T	15_S	0.815	0.94
213_P	218_F	0.815	0.94
196_S	199_E	0.814	0.94
206_L	342_S	0.813	0.94
21_N	25_R	0.811	0.94
93_V	124_Q	0.811	0.94
216_V	226_L	0.811	0.94
367_I	390_K	0.811	0.94
96_T	134_A	0.810	0.94
103_R	117_D	0.807	0.94
98_W	101_G	0.805	0.94
35_Q	128_G	0.799	0.94
264_V	308_V	0.796	0.94
131_V	134_A	0.793	0.93
211_L	226_L	0.792	0.93
21_N	232_T	0.787	0.93
79_S	83_M	0.787	0.93
338_L	382_V	0.786	0.93
338_L	370_K	0.785	0.93
343_I	379_V	0.783	0.93
92_A	132_I	0.782	0.93
53_L	69_L	0.778	0.93
68_M	94_S	0.775	0.93
214_R	217_E	0.775	0.93
259_D	339_A	0.774	0.93
308_V	316_T	0.773	0.93
81_L	85_L	0.772	0.92
48_D	150_R	0.771	0.92
187_K	393_E	0.771	0.92
365_K	387_D	0.766	0.92
96_T	100_A	0.762	0.92
267_Y	333_E	0.761	0.92
58_S	61_P	0.761	0.92
101_G	104_T	0.759	0.92
23_A	85_L	0.756	0.92
362_L	367_I	0.755	0.92
211_L	215_A	0.751	0.91
361_V	365_K	0.749	0.91
312_D	315_Q	0.748	0.91
276_L	290_V	0.746	0.91
292_I	373_S	0.745	0.91
154_D	174_D	0.743	0.91
181_T	186_V	0.741	0.91
124_Q	131_V	0.741	0.91
261_I	309_K	0.740	0.91
97_G	133_V	0.739	0.91
11_T	46_S	0.739	0.91
280_F	289_N	0.739	0.91
288_I	316_T	0.738	0.91
320_L	332_I	0.735	0.91
286_R	319_V	0.735	0.91
279_I	320_L	0.735	0.91
59_D	314_D	0.734	0.90
105_E	112_R	0.733	0.90
15_S	43_M	0.732	0.90
194_G	243_E	0.730	0.90
75_Q	145_I	0.730	0.90
8_F	13_V	0.730	0.90
264_V	317_V	0.729	0.90
340_K	380_S	0.729	0.90
283_L	288_I	0.728	0.90
61_P	66_M	0.728	0.90
8_F	12_S	0.727	0.90
55_K	311_E	0.727	0.90
194_G	245_S	0.726	0.90
185_Y	259_D	0.725	0.90
105_E	108_H	0.722	0.90
8_F	29_E	0.720	0.90
82_S	132_I	0.719	0.90
353_G	368_L	0.717	0.89
296_T	305_S	0.716	0.89
283_L	313_A	0.714	0.89
294_I	373_S	0.714	0.89
179_F	211_L	0.713	0.89
58_S	62_S	0.712	0.89
356_A	363_A	0.712	0.89
281_T	360_A	0.704	0.89
97_G	137_Q	0.703	0.88
276_L	368_L	0.701	0.88
216_V	240_I	0.700	0.88
254_G	344_V	0.699	0.88
335_E	338_L	0.698	0.88
335_E	384_S	0.698	0.88
171_I	178_V	0.697	0.88
196_S	242_E	0.694	0.88
322_E	326_A	0.694	0.88
194_G	244_S	0.693	0.88
67_D	138_G	0.691	0.88
162_A	222_Y	0.688	0.87
48_D	52_S	0.687	0.87
104_T	111_A	0.686	0.87
115_D	118_T	0.681	0.87
181_T	255_I	0.680	0.87
124_Q	127_K	0.680	0.87
173_T	210_V	0.680	0.87
178_V	238_T	0.679	0.87
103_R	143_C	0.679	0.87
105_E	110_N	0.679	0.87
302_T	305_S	0.677	0.87
360_A	363_A	0.675	0.86
277_S	281_T	0.675	0.86
102_I	116_I	0.675	0.86
320_L	323_Y	0.675	0.86
97_G	101_G	0.674	0.86
14_G	43_M	0.674	0.86
63_K	315_Q	0.673	0.86
275_T	304_I	0.672	0.86
178_V	200_M	0.671	0.86
274_T	295_Q	0.670	0.86
364_Q	386_N	0.670	0.86
7_K	10_G	0.668	0.86
283_L	306_F	0.666	0.86
279_I	306_F	0.663	0.85
320_L	324_K	0.662	0.85
296_T	302_T	0.660	0.85
283_L	316_T	0.658	0.85
261_I	291_D	0.657	0.85
103_R	115_D	0.655	0.85
180_T	190_R	0.655	0.85
86_Q	92_A	0.653	0.85
37_V	156_T	0.652	0.84
75_Q	96_T	0.651	0.84
78_I	132_I	0.651	0.84
279_I	332_I	0.647	0.84
91_D	127_K	0.647	0.84
44_G	209_G	0.646	0.84
363_A	368_L	0.646	0.84
355_A	372_V	0.646	0.84
8_F	170_D	0.644	0.84
230_S	233_E	0.643	0.84
18_K	22_A	0.642	0.84
348_M	376_E	0.642	0.84
262_T	308_V	0.641	0.83
156_T	218_F	0.641	0.83
94_S	134_A	0.640	0.83
273_L	276_L	0.639	0.83
217_E	221_N	0.637	0.83
386_N	390_K	0.636	0.83
76_V	79_S	0.636	0.83
122_A	125_L	0.631	0.82
280_F	293_I	0.627	0.82
280_F	291_D	0.627	0.82
362_L	381_T	0.627	0.82
155_T	212_H	0.626	0.82
390_K	394_S	0.626	0.82
107_I	110_N	0.625	0.82
188_S	401_L	0.623	0.82
75_Q	78_I	0.623	0.82
340_K	382_V	0.622	0.82
125_L	131_V	0.621	0.81
6_Q	25_R	0.619	0.81
178_V	210_V	0.618	0.81
280_F	304_I	0.618	0.81
103_R	114_T	0.617	0.81
212_H	218_F	0.617	0.81
260_Q	385_E	0.617	0.81
118_T	121_L	0.616	0.81
229_R	234_T	0.616	0.81
57_I	83_M	0.616	0.81
359_F	369_I	0.615	0.81
383_V	388_M	0.613	0.81
14_G	232_T	0.613	0.81
394_S	398_A	0.612	0.81
265_T	333_E	0.611	0.80
315_Q	318_A	0.610	0.80
215_A	218_F	0.609	0.80
85_L	92_A	0.609	0.80
171_I	210_V	0.608	0.80
28_A	235_E	0.606	0.80
171_I	209_G	0.605	0.80
268_G	297_Q	0.605	0.80
313_A	316_T	0.605	0.80
22_A	231_S	0.604	0.80
358_M	379_V	0.603	0.80
72_T	75_Q	0.603	0.80
391_A	394_S	0.602	0.79
108_H	144_E	0.602	0.79
84_A	87_E	0.599	0.79
264_V	332_I	0.599	0.79
5_V	166_A	0.597	0.79
106_A	141_E	0.597	0.79
393_E	397_D	0.594	0.79
190_R	194_G	0.594	0.79
60_Q	314_D	0.593	0.78
30_K	33_G	0.592	0.78
305_S	371_M	0.590	0.78
276_L	372_V	0.588	0.78
179_F	191_K	0.588	0.78
190_R	250_L	0.588	0.78
384_S	394_S	0.586	0.78
119_S	122_A	0.586	0.78
8_F	234_T	0.586	0.78
261_I	307_S	0.586	0.78
46_S	53_L	0.583	0.77
173_T	231_S	0.583	0.77
383_V	391_A	0.583	0.77
267_Y	302_T	0.583	0.77
12_S	210_V	0.583	0.77
20_Q	24_N	0.581	0.77
99_Q	124_Q	0.581	0.77
66_M	109_G	0.580	0.77
278_T	323_Y	0.578	0.77
314_D	317_V	0.578	0.77
367_I	387_D	0.576	0.76
211_L	228_V	0.575	0.76
253_R	256_A	0.575	0.76
353_G	356_A	0.575	0.76
272_G	275_T	0.574	0.76
17_E	20_Q	0.573	0.76
257_F	341_V	0.573	0.76
181_T	396_H	0.572	0.76
202_E	359_F	0.571	0.76
12_S	171_I	0.570	0.76
80_L	99_Q	0.570	0.76
215_A	219_A	0.570	0.76
92_A	130_I	0.569	0.76
348_M	379_V	0.568	0.75
40_V	77_T	0.568	0.75
219_A	222_Y	0.568	0.75
67_D	149_G	0.565	0.75
274_T	289_N	0.565	0.75
14_G	18_K	0.565	0.75
292_I	307_S	0.564	0.75
96_T	145_I	0.563	0.75
359_F	372_V	0.563	0.75
177_G	191_K	0.562	0.75
155_T	215_A	0.562	0.75
348_M	355_A	0.561	0.75
271_S	274_T	0.561	0.75
368_L	373_S	0.560	0.74
168_K	229_R	0.557	0.74
3_L	122_A	0.555	0.74
365_K	391_A	0.553	0.74
13_V	22_A	0.552	0.73
266_I	332_I	0.549	0.73
13_V	43_M	0.547	0.73
134_A	145_I	0.547	0.73
336_S	390_K	0.546	0.73
106_A	114_T	0.546	0.73
151_G	215_A	0.545	0.72
180_T	189_A	0.542	0.72
241_E	244_S	0.542	0.72
371_M	382_V	0.541	0.72
68_M	145_I	0.539	0.72
165_K	223_Q	0.539	0.72
152_G	174_D	0.538	0.71
359_F	368_L	0.537	0.71
365_K	397_D	0.537	0.71
181_T	190_R	0.536	0.71
108_H	146_T	0.533	0.71
252_V	255_I	0.531	0.71
250_L	253_R	0.531	0.71
278_T	322_E	0.531	0.71
22_A	29_E	0.530	0.70
136_F	153_S	0.529	0.70
225_P	239_L	0.529	0.70
67_D	108_H	0.528	0.70
291_D	354_V	0.528	0.70
257_F	339_A	0.527	0.70
11_T	18_K	0.526	0.70
159_A	214_R	0.525	0.70
290_V	303_G	0.524	0.70
41_S	47_T	0.524	0.70
54_A	61_P	0.524	0.70
357_E	361_V	0.523	0.69
355_A	376_E	0.522	0.69
102_I	113_I	0.522	0.69
263_R	371_M	0.521	0.69
75_Q	98_W	0.518	0.69
310_T	337_K	0.517	0.68
280_F	295_Q	0.516	0.68
111_A	147_T	0.515	0.68
285_K	326_A	0.514	0.68
200_M	206_L	0.514	0.68
22_A	25_R	0.513	0.68
273_L	368_L	0.511	0.68
243_E	250_L	0.511	0.68
271_S	302_T	0.510	0.67
36_V	130_I	0.509	0.67
4_I	170_D	0.509	0.67
354_V	379_V	0.508	0.67
136_F	150_R	0.508	0.67
47_T	73_G	0.507	0.67
283_L	319_V	0.506	0.67
30_K	128_G	0.506	0.67
356_A	360_A	0.505	0.67
271_S	276_L	0.505	0.67
221_N	250_L	0.505	0.67
15_S	22_A	0.505	0.67
193_E	321_E	0.504	0.67
376_E	379_V	0.504	0.67
36_V	161_A	0.504	0.67
93_V	143_C	0.504	0.67
357_E	400_E	0.503	0.66
170_D	230_S	0.503	0.66
12_S	173_T	0.503	0.66
89_G	94_S	0.502	0.66
311_E	314_D	0.502	0.66
260_Q	311_E	0.501	0.66
202_E	205_N	0.501	0.66
78_I	96_T	0.501	0.66
69_L	83_M	0.500	0.66
315_Q	319_V	0.500	0.66
368_L	371_M	0.500	0.66

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2j0wA	2	0.9461	100	0.231	Contact Map
2cdqA	2	0.973	100	0.242	Contact Map
3ab4A	7	0.9412	100	0.243	Contact Map
3l76A	2	0.9755	100	0.249	Contact Map
3c1mA	3	0.973	100	0.26	Contact Map
3tviA	2	0.9485	100	0.277	Contact Map
4ab7A	3	0.8529	100	0.655	Contact Map
2a1fA	5	0.5515	100	0.708	Contact Map
2j4jA	5	0.5074	100	0.709	Contact Map
1ybdA	5	0.5294	100	0.709	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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