GREMLIN Database
SDHA - Succinate dehydrogenase flavoprotein subunit
UniProt: P08065 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 586 (512)
Sequences: 5416 (2710)
Seq/√Len: 119.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
541_N544_E4.6111.00
276_Y279_Y4.0431.00
7_I174_I3.9371.00
361_D365_M3.8921.00
160_F219_I3.4371.00
83_K87_E3.3231.00
267_K274_E3.2661.00
263_Y267_K3.2411.00
77_A82_V3.2081.00
4_S30_K3.1551.00
463_V519_T2.9851.00
85_M381_M2.9551.00
469_N526_N2.8921.00
18_A193_I2.8581.00
483_M516_R2.8421.00
462_N474_K2.7361.00
249_M253_A2.6361.00
270_Y281_N2.6001.00
273_E280_G2.5931.00
372_F405_N2.5831.00
155_Y187_F2.4981.00
469_N473_L2.4921.00
263_Y295_V2.4731.00
88_A401_V2.4261.00
142_Q145_R2.4101.00
28_A153_T2.4001.00
9_V174_I2.3911.00
178_N181_N2.3541.00
476_D519_T2.3531.00
454_E478_K2.3531.00
526_N537_Y2.3451.00
221_Y517_V2.3401.00
468_H535_P2.3091.00
13_L395_A2.2711.00
358_L377_C2.2391.00
30_K155_Y2.2391.00
18_A374_A2.2221.00
473_L523_Y2.1891.00
480_Q516_R2.1661.00
22_A406_A2.1451.00
84_A401_V2.1221.00
365_M405_N2.0961.00
64_E121_H2.0871.00
463_V475_T2.0861.00
3_Q188_R2.0731.00
162_G222_Q2.0671.00
32_F176_A2.0521.00
468_H471_K2.0261.00
13_L42_S2.0241.00
217_A227_Y2.0211.00
261_W344_P2.0161.00
373_A377_C2.0161.00
5_S190_D1.9891.00
194_M358_L1.9881.00
85_M398_G1.9851.00
261_W314_S1.9801.00
318_P322_D1.9731.00
22_A403_G1.9651.00
292_I309_V1.9441.00
239_A350_A1.9291.00
134_Q137_Y1.9121.00
314_S344_P1.8821.00
259_R270_Y1.8651.00
253_A258_G1.8621.00
176_A187_F1.8561.00
30_K187_F1.8531.00
194_M377_C1.8501.00
479_I519_T1.8391.00
366_T373_A1.8191.00
463_V472_L1.8141.00
458_W475_T1.8121.00
193_I406_A1.8041.00
226_Y367_N1.8011.00
329_I333_E1.7951.00
106_T110_L1.7681.00
459_M463_V1.7671.00
74_D540_R1.7531.00
79_Q83_K1.7431.00
92_I95_L1.7371.00
199_P354_S1.7191.00
73_G77_A1.7161.00
169_R369_P1.7131.00
66_F83_K1.7121.00
196_T216_A1.7061.00
170_T370_G1.7001.00
178_N185_E1.6931.00
476_D516_R1.6831.00
54_N59_G1.6781.00
454_E485_R1.6761.00
202_I518_I1.6721.00
42_S136_L1.6691.00
220_V358_L1.6541.00
222_Q510_N1.6411.00
227_Y230_G1.6261.00
322_D329_I1.6261.00
81_P362_Y1.6251.00
458_W478_K1.6081.00
363_D405_N1.6071.00
476_D520_L1.5901.00
23_A146_Y1.5861.00
455_L479_I1.5741.00
6_I22_A1.5721.00
171_C192_V1.5651.00
39_R44_C1.5621.00
52_A62_P1.5571.00
364_Q402_A1.5571.00
402_A406_A1.5451.00
226_Y359_W1.5331.00
318_P341_R1.5241.00
360_V378_D1.5241.00
469_N534_K1.5081.00
322_D341_R1.5061.00
164_V186_S1.4991.00
446_E485_R1.4891.00
81_P85_M1.4831.00
483_M513_Q1.4821.00
66_F70_V1.4801.00
313_L316_K1.4771.00
4_S7_I1.4611.00
94_H98_R1.4611.00
21_K404_P1.4611.00
220_V225_A1.4581.00
34_I507_Q1.4551.00
270_Y273_E1.4541.00
462_N475_T1.4411.00
475_T519_T1.4351.00
478_K481_E1.4221.00
62_P87_E1.4211.00
49_I135_L1.4191.00
34_I215_S1.4141.00
462_N471_K1.4111.00
62_P66_F1.4011.00
42_S395_A1.3991.00
469_N523_Y1.3981.00
88_A91_S1.3931.00
207_T239_A1.3921.00
24_E146_Y1.3911.00
4_S153_T1.3871.00
250_S253_A1.3841.00
4_S28_A1.3841.00
143_V154_K1.3831.00
92_I400_M1.3821.00
194_M371_L1.3771.00
170_T369_P1.3741.00
158_W178_N1.3731.00
476_D523_Y1.3681.00
191_A409_Y1.3671.00
189_S192_V1.3661.00
97_D111_L1.3651.00
34_I213_T1.3521.00
355_M531_A1.3461.00
516_R520_L1.3441.00
228_A359_W1.3431.00
215_S510_N1.3401.00
203_F463_V1.3381.00
199_P233_I1.3361.00
200_G351_V1.3261.00
457_E461_A1.3261.00
16_L143_V1.3211.00
250_S328_I1.3211.00
405_N409_Y1.3161.00
260_V347_I1.3151.00
163_A171_C1.3131.00
194_M220_V1.3121.00
372_F409_Y1.3091.00
81_P381_M1.2951.00
329_I341_R1.2911.00
4_S155_Y1.2901.00
473_L477_D1.2861.00
160_F174_I1.2851.00
164_V175_V1.2821.00
155_Y158_W1.2781.00
259_R281_N1.2771.00
101_V135_L1.2721.00
50_N389_A1.2711.00
290_R533_Y1.2640.99
193_I374_A1.2620.99
9_V194_M1.2560.99
32_F174_I1.2540.99
88_A92_I1.2510.99
463_V518_I1.2380.99
204_G457_E1.2360.99
14_A374_A1.2350.99
6_I193_I1.2340.99
89_A393_L1.2330.99
31_L154_K1.2300.99
405_N408_K1.2280.99
158_W176_A1.2250.99
542_D546_L1.2080.99
462_N478_K1.2010.99
160_F176_A1.2000.99
62_P86_C1.1980.99
275_K291_E1.1960.99
67_D71_Y1.1900.99
522_A532_H1.1810.99
50_N119_T1.1700.99
63_W67_D1.1700.99
11_G33_S1.1650.99
256_E324_K1.1640.99
65_H390_N1.1620.99
66_F86_C1.1560.99
217_A514_L1.1520.99
17_M21_K1.1510.99
400_M404_P1.1510.99
21_K403_G1.1490.99
162_G219_I1.1480.99
143_V152_V1.1460.99
469_N537_Y1.1350.99
271_F292_I1.1330.99
222_Q513_Q1.1270.99
199_P518_I1.1240.99
316_K320_E1.1230.99
365_M409_Y1.1210.99
158_W185_E1.1180.99
21_K400_M1.1160.99
63_W83_K1.1070.99
144_R156_E1.0990.99
318_P342_K1.0970.99
231_E525_R1.0940.99
360_V373_A1.0890.98
7_I32_F1.0850.98
321_L329_I1.0800.98
16_L31_L1.0800.98
84_A362_Y1.0780.98
84_A88_A1.0770.98
225_A371_L1.0770.98
473_L476_D1.0760.98
65_H69_T1.0700.98
95_L400_M1.0700.98
18_A402_A1.0660.98
452_H456_G1.0650.98
20_I143_V1.0630.98
53_V125_A1.0610.98
399_G403_G1.0580.98
358_L373_A1.0570.98
6_I406_A1.0550.98
330_E334_K1.0520.98
119_T389_A1.0520.98
124_T389_A1.0510.98
84_A398_G1.0500.98
521_G549_T1.0460.98
453_K457_E1.0440.98
159_E506_R1.0430.98
452_H511_M1.0380.98
133_Q137_Y1.0340.98
90_P94_H1.0300.98
101_V134_Q1.0280.98
458_W462_N1.0260.98
18_A406_A1.0250.98
217_A354_S1.0240.98
275_K295_V1.0220.98
101_V138_A1.0190.98
31_L143_V1.0120.98
66_F79_Q1.0100.98
99_M142_Q1.0090.97
111_L125_A1.0090.97
486_F512_L1.0060.97
458_W482_L1.0050.97
403_G407_V1.0010.97
191_A372_F1.0010.97
542_D545_W1.0000.97
455_L508_F0.9950.97
76_L529_R0.9940.97
64_E120_Q0.9940.97
82_V86_C0.9920.97
130_T327_G0.9890.97
115_R122_H0.9860.97
322_D333_E0.9850.97
37_V140_D0.9850.97
20_I99_M0.9840.97
9_V160_F0.9840.97
272_L280_G0.9840.97
338_D343_L0.9820.97
339_D342_K0.9820.97
142_Q146_Y0.9820.97
5_S28_A0.9810.97
175_V184_I0.9780.97
381_M398_G0.9680.97
104_N126_Y0.9680.97
264_K306_E0.9600.97
270_Y280_G0.9600.97
225_A368_I0.9530.96
474_K478_K0.9520.96
480_Q520_L0.9480.96
21_K24_E0.9480.96
7_I189_S0.9470.96
317_D320_E0.9420.96
141_E145_R0.9370.96
20_I146_Y0.9370.96
526_N545_W0.9360.96
163_A174_I0.9350.96
261_W312_D0.9330.96
225_A367_N0.9330.96
273_E281_N0.9310.96
406_A410_V0.9300.96
163_A192_V0.9280.96
159_E507_Q0.9280.96
467_R522_A0.9250.96
165_L171_C0.9220.96
175_V186_S0.9210.96
310_Y344_P0.9200.96
258_G313_L0.9190.96
91_S94_H0.9140.96
69_T390_N0.9110.95
191_A410_V0.9070.95
119_T124_T0.9060.95
478_K482_L0.9060.95
360_V379_Y0.9040.95
271_F281_N0.9040.95
140_D154_K0.9040.95
374_A402_A0.9020.95
43_V133_Q0.9000.95
17_M92_I0.8980.95
122_H256_E0.8970.95
338_D345_M0.8950.95
105_R111_L0.8950.95
70_V82_V0.8940.95
21_K95_L0.8840.95
214_G514_L0.8800.94
301_L305_G0.8790.94
80_P362_Y0.8780.94
259_R315_H0.8780.94
102_M134_Q0.8780.94
331_I334_K0.8780.94
403_G406_A0.8760.94
263_Y266_G0.8750.94
319_K323_I0.8740.94
283_V288_A0.8680.94
332_Y340_P0.8660.94
360_V398_G0.8650.94
218_S222_Q0.8610.94
6_I27_M0.8590.94
230_G518_I0.8540.94
455_L512_L0.8530.94
85_M393_L0.8530.94
283_V287_I0.8520.93
51_G93_I0.8500.93
6_I26_G0.8470.93
190_D410_V0.8460.93
233_I518_I0.8460.93
472_L519_T0.8450.93
35_V211_I0.8450.93
81_P84_A0.8450.93
45_A48_G0.8440.93
114_R256_E0.8440.93
218_S514_L0.8430.93
169_R368_I0.8430.93
452_H508_F0.8420.93
253_A313_L0.8410.93
96_L135_L0.8410.93
275_K294_D0.8400.93
204_G460_T0.8400.93
261_W310_Y0.8380.93
466_V535_P0.8360.93
301_L306_E0.8350.93
19_T152_V0.8350.93
95_L99_M0.8340.93
67_D79_Q0.8320.93
66_F82_V0.8320.93
321_L341_R0.8320.93
118_G355_M0.8310.93
136_L140_D0.8280.92
70_V77_A0.8280.92
251_E254_R0.8270.92
49_I93_I0.8250.92
332_Y338_D0.8240.92
435_K509_S0.8230.92
529_R538_P0.8190.92
455_L482_L0.8180.92
219_I222_Q0.8140.92
226_Y552_K0.8130.92
88_A400_M0.8120.92
230_G521_G0.8100.92
363_D401_V0.8050.91
3_Q28_A0.8000.91
195_A374_A0.7990.91
479_I516_R0.7980.91
459_M515_A0.7970.91
230_G514_L0.7970.91
213_T507_Q0.7970.91
8_V29_V0.7960.91
201_I456_G0.7960.91
527_E538_P0.7950.91
483_M512_L0.7920.91
274_E295_V0.7890.91
7_I192_V0.7880.91
476_D480_Q0.7880.91
62_P90_P0.7880.91
226_Y550_M0.7880.91
22_A27_M0.7830.90
190_D414_E0.7820.90
407_V410_V0.7780.90
102_M138_A0.7780.90
7_I30_K0.7720.90
227_Y517_V0.7710.90
49_I396_I0.7700.90
52_A86_C0.7670.89
329_I340_P0.7670.89
301_L304_N0.7650.89
18_A22_A0.7620.89
95_L98_R0.7580.89
466_V533_Y0.7560.89
248_L251_E0.7540.89
529_R537_Y0.7530.88
86_C89_A0.7520.88
332_Y345_M0.7510.88
451_L508_F0.7500.88
127_A134_Q0.7470.88
229_N548_T0.7460.88
193_I402_A0.7460.88
520_L524_N0.7460.88
264_K307_N0.7440.88
448_A505_T0.7410.88
320_E323_I0.7390.88
102_M105_R0.7390.88
404_P408_K0.7380.87
218_S510_N0.7380.87
165_L169_R0.7350.87
319_K322_D0.7330.87
294_D466_V0.7320.87
22_A26_G0.7320.87
178_N183_Q0.7310.87
26_G29_V0.7300.87
20_I142_Q0.7280.87
450_V454_E0.7280.87
23_A152_V0.7260.87
7_I187_F0.7250.87
207_T350_A0.7250.87
470_D474_K0.7250.87
193_I410_V0.7240.86
409_Y413_L0.7230.86
521_G551_A0.7220.86
17_M95_L0.7190.86
321_L340_P0.7190.86
353_Y356_G0.7180.86
23_A29_V0.7170.86
116_F124_T0.7170.86
70_V79_Q0.7170.86
517_V551_A0.7140.86
352_H355_M0.7130.86
253_A321_L0.7130.86
40_S45_A0.7110.85
199_P217_A0.7110.85
313_L321_L0.7090.85
25_S407_V0.7090.85
545_W548_T0.7090.85
25_S408_K0.7080.85
301_L308_M0.7070.85
264_K308_M0.7070.85
293_F466_V0.7060.85
191_A406_A0.7060.85
51_G125_A0.7060.85
97_D105_R0.7050.85
203_F518_I0.7050.85
97_D125_A0.7050.85
271_F275_K0.7050.85
41_H209_S0.7040.85
117_G279_Y0.7030.85
473_L520_L0.7030.85
114_R126_Y0.7010.85
172_R188_R0.7000.85
91_S400_M0.6990.84
49_I393_L0.6980.84
261_W264_K0.6960.84
140_D144_R0.6940.84
216_A377_C0.6910.84
365_M369_P0.6910.84
158_W187_F0.6910.84
201_I511_M0.6900.84
474_K477_D0.6890.84
462_N519_T0.6870.83
232_F525_R0.6870.83
30_K153_T0.6870.83
205_K460_T0.6860.83
454_E457_E0.6860.83
263_Y274_E0.6850.83
408_K412_G0.6840.83
166_D169_R0.6810.83
236_H251_E0.6800.83
35_V39_R0.6800.83
202_I514_L0.6800.83
233_I354_S0.6790.83
190_D415_S0.6770.83
27_M407_V0.6770.83
8_V18_A0.6770.83
43_V137_Y0.6770.83
442_M445_T0.6750.82
482_L512_L0.6750.82
37_V154_K0.6730.82
61_S64_E0.6730.82
92_I396_I0.6720.82
41_H212_N0.6720.82
36_P156_E0.6710.82
32_F187_F0.6700.82
174_I189_S0.6700.82
157_G180_T0.6690.82
165_L172_R0.6670.82
50_N86_C0.6660.82
271_F295_V0.6660.82
528_S533_Y0.6650.81
372_F406_A0.6630.81
249_M345_M0.6620.81
333_E341_R0.6610.81
374_A403_G0.6600.81
171_C368_I0.6590.81
32_F155_Y0.6590.81
124_T388_G0.6590.81
166_D170_T0.6580.81
161_L177_Q0.6570.81
467_R532_H0.6560.81
13_L139_L0.6550.80
5_S27_M0.6550.80
116_F389_A0.6550.80
260_V272_L0.6550.80
200_G206_S0.6550.80
526_N544_E0.6550.80
137_Y141_E0.6550.80
291_E295_V0.6540.80
249_M328_I0.6530.80
360_V364_Q0.6530.80
309_V347_I0.6530.80
513_Q516_R0.6530.80
176_A185_E0.6520.80
286_D290_R0.6510.80
112_D126_Y0.6510.80
221_Y227_Y0.6500.80
200_G208_N0.6490.80
374_A399_G0.6480.80
451_L454_E0.6470.80
102_M137_Y0.6460.80
352_H356_G0.6460.80
279_Y287_I0.6450.79
264_K304_N0.6450.79
23_A407_V0.6450.79
446_E454_E0.6450.79
446_E450_V0.6440.79
58_E110_L0.6430.79
295_V301_L0.6430.79
276_Y284_P0.6420.79
37_V156_E0.6420.79
44_C209_S0.6410.79
274_E303_I0.6400.79
247_R328_I0.6400.79
218_S513_Q0.6390.79
221_Y513_Q0.6380.79
267_K295_V0.6360.78
202_I515_A0.6360.78
196_T377_C0.6350.78
164_V188_R0.6340.78
247_R331_I0.6340.78
64_E67_D0.6340.78
291_E294_D0.6340.78
165_L168_D0.6330.78
199_P202_I0.6320.78
170_T409_Y0.6320.78
238_T254_R0.6300.78
13_L396_I0.6300.78
213_T510_N0.6300.78
453_K456_G0.6290.78
480_Q484_E0.6290.78
25_S404_P0.6290.78
41_H44_C0.6280.78
52_A65_H0.6280.78
365_M372_F0.6270.77
389_A394_S0.6260.77
376_E386_R0.6260.77
481_E485_R0.6250.77
306_E309_V0.6240.77
236_H254_R0.6230.77
458_W479_I0.6220.77
23_A147_E0.6210.77
27_M410_V0.6210.77
471_K475_T0.6180.76
477_D480_Q0.6180.76
241_P244_D0.6180.76
461_A471_K0.6170.76
20_I152_V0.6160.76
101_V396_I0.6150.76
200_G354_S0.6140.76
475_T478_K0.6130.76
370_G409_Y0.6110.76
50_N124_T0.6090.75
161_L184_I0.6080.75
484_E487_K0.6080.75
179_L503_M0.6070.75
62_P83_K0.6060.75
11_G31_L0.6060.75
481_E484_E0.6050.75
284_P287_I0.6040.75
228_A379_Y0.6040.75
23_A26_G0.6040.75
52_A66_F0.6030.75
134_Q138_A0.6030.75
251_E255_G0.6020.75
191_A370_G0.6020.75
200_G233_I0.6010.74
293_F302_G0.6000.74
162_G223_Q0.6000.74
76_L232_F0.5990.74
171_C370_G0.5960.74
286_D289_T0.5940.74
113_F125_A0.5940.74
161_L175_V0.5920.73
248_L254_R0.5910.73
293_F348_F0.5900.73
116_F388_G0.5900.73
172_R192_V0.5900.73
253_A328_I0.5890.73
76_L231_E0.5880.73
163_A230_G0.5860.73
449_Y504_F0.5860.73
17_M399_G0.5850.73
317_D341_R0.5850.73
263_Y271_F0.5850.73
70_V75_F0.5840.72
352_H387_L0.5830.72
272_L283_V0.5830.72
304_N307_N0.5810.72
276_Y283_V0.5810.72
545_W549_T0.5810.72
216_A223_Q0.5800.72
247_R340_P0.5800.72
238_T286_D0.5800.72
18_A399_G0.5800.72
50_N65_H0.5800.72
454_E481_E0.5800.72
164_V172_R0.5790.72
138_A142_Q0.5770.71
398_G401_V0.5760.71
486_F489_I0.5760.71
452_H507_Q0.5750.71
351_V356_G0.5740.71
106_T112_D0.5740.71
190_D416_S0.5740.71
484_E488_K0.5730.71
339_D343_L0.5730.71
174_I192_V0.5710.71
24_E95_L0.5710.71
42_S45_A0.5710.71
205_K348_F0.5700.71
8_V19_T0.5700.71
106_T109_G0.5700.71
439_I442_M0.5690.70
48_G52_A0.5690.70
528_S538_P0.5690.70
406_A409_Y0.5680.70
479_I512_L0.5670.70
264_K310_Y0.5660.70
83_K86_C0.5660.70
244_D336_M0.5650.70
305_G308_M0.5650.70
225_A366_T0.5640.70
285_R289_T0.5630.70
4_S187_F0.5630.70
165_L369_P0.5630.70
69_T82_V0.5630.70
247_R250_S0.5620.70
192_V219_I0.5620.70
374_A395_A0.5600.69
472_L522_A0.5600.69
524_N549_T0.5590.69
408_K413_L0.5590.69
163_A194_M0.5590.69
114_R324_K0.5590.69
17_M99_M0.5580.69
36_P157_G0.5570.69
159_E510_N0.5560.69
397_Y401_V0.5560.69
441_S481_E0.5560.69
461_A474_K0.5560.69
94_H97_D0.5550.69
166_D172_R0.5550.69
8_V193_I0.5550.69
238_T251_E0.5540.68
21_K25_S0.5540.68
81_P379_Y0.5530.68
417_A420_M0.5510.68
86_C398_G0.5500.68
287_I290_R0.5500.68
8_V26_G0.5490.68
293_F465_V0.5490.68
254_R257_G0.5490.68
362_Y398_G0.5480.68
39_R42_S0.5470.67
259_R280_G0.5470.67
544_E547_K0.5460.67
470_D473_L0.5460.67
116_F119_T0.5460.67
459_M462_N0.5440.67
378_D398_G0.5430.67
446_E451_L0.5410.67
279_Y284_P0.5410.67
146_Y152_V0.5400.66
135_L396_I0.5400.66
40_S136_L0.5390.66
452_H504_F0.5390.66
527_E537_Y0.5380.66
249_M347_I0.5370.66
5_S30_K0.5360.66
520_L523_Y0.5340.66
451_L512_L0.5330.65
349_P352_H0.5320.65
507_Q511_M0.5320.65
167_D172_R0.5310.65
129_A134_Q0.5310.65
271_F291_E0.5300.65
165_L368_I0.5300.65
59_G121_H0.5290.65
331_I336_M0.5280.65
49_I103_F0.5280.65
88_A397_Y0.5280.65
448_A508_F0.5270.65
177_Q506_R0.5270.65
292_I347_I0.5270.65
130_T134_Q0.5270.65
8_V406_A0.5270.65
171_C371_L0.5260.64
313_L340_P0.5250.64
363_D404_P0.5240.64
162_G510_N0.5240.64
177_Q182_M0.5240.64
21_K399_G0.5240.64
519_T523_Y0.5230.64
24_E98_R0.5230.64
67_D70_V0.5220.64
276_Y287_I0.5220.64
192_V370_G0.5190.63
350_A353_Y0.5180.63
170_T416_S0.5180.63
280_G283_V0.5180.63
91_S343_L0.5170.63
215_S507_Q0.5170.63
455_L511_M0.5170.63
303_I308_M0.5160.63
303_I310_Y0.5150.63
48_G236_H0.5140.63
46_Q325_L0.5140.63
263_Y270_Y0.5130.63
33_S154_K0.5130.63
347_I356_G0.5120.62
451_L489_I0.5120.62
126_Y129_A0.5120.62
202_I511_M0.5110.62
125_A396_I0.5110.62
207_T351_V0.5100.62
113_F389_A0.5100.62
471_K474_K0.5090.62
460_T465_V0.5090.62
48_G53_V0.5080.62
516_R519_T0.5080.62
349_P356_G0.5080.62
191_A413_L0.5070.62
252_S255_G0.5070.62
480_Q483_M0.5060.61
22_A407_V0.5060.61
105_R109_G0.5060.61
37_V40_S0.5060.61
49_I52_A0.5050.61
231_E521_G0.5050.61
66_F87_E0.5050.61
108_E147_E0.5050.61
47_G254_R0.5040.61
266_G344_P0.5020.61
82_V85_M0.5020.61
409_Y412_G0.5010.61
503_M507_Q0.5010.61
33_S156_E0.5010.61
434_E437_A0.5000.61
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2bs2A 2 0.9744 100 0.271 Contact Map
2h88A 2 0.959 100 0.275 Contact Map
1kf6A 1 0.9488 100 0.279 Contact Map
2wdqA 1 0.9539 100 0.295 Contact Map
1chuA 2 0.7901 100 0.38 Contact Map
3gyxA 2 0.9027 100 0.387 Contact Map
2e5vA 1 0.8038 100 0.409 Contact Map
1jnrA 2 0.9113 100 0.417 Contact Map
4c3xA 4 0.6485 100 0.613 Contact Map
1y0pA 1 0.6433 100 0.656 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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