GERAA - BACSU - GREMLIN Contacts

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GERAA - Spore germination protein A1

UniProt:	P07868	Sequences: MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTDENKVSEAIKTLIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNCAVFINGLDKAYILTTGKKKTRSLTEPTTEKVVRGPKVAFVEDIDTNLALIRQRTSHPKLITKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQLEDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNGRVAILVDSSPFVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITLVSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLSFRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSLKNTDDSIIRLPIKNKPKEVNNPNEPKTDSTET	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	482 (465)
Sequences:	2253 (1878)
Seq/√Len:	87.1

BACSU - GERAA YNDD YFKQ GERKA GERBA SP5AF

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
162_K	192_K	7.445	1.00
233_V	243_A	7.090	1.00
411_S	423_F	5.841	1.00
168_E	199_Q	4.946	1.00
100_C	115_T	4.761	1.00
183_A	188_I	4.524	1.00
166_I	195_L	3.919	1.00
214_E	272_R	3.566	1.00
366_Q	370_E	3.560	1.00
245_L	252_V	3.240	1.00
298_I	409_M	3.151	1.00
161_T	175_A	3.113	1.00
224_I	255_V	3.074	1.00
176_I	192_K	3.018	1.00
161_T	177_M	2.978	1.00
95_I	101_A	2.978	1.00
150_I	245_L	2.971	1.00
179_I	182_K	2.901	1.00
292_F	424_M	2.836	1.00
144_D	147_L	2.830	1.00
331_A	378_L	2.797	1.00
137_V	153_R	2.788	1.00
205_D	249_S	2.787	1.00
87_T	90_K	2.715	1.00
169_N	181_G	2.690	1.00
14_L	41_Y	2.677	1.00
202_D	238_F	2.675	1.00
101_A	112_I	2.673	1.00
85_V	112_I	2.605	1.00
408_S	423_F	2.602	1.00
150_I	177_M	2.525	1.00
432_T	442_F	2.508	1.00
227_T	233_V	2.491	1.00
179_I	237_L	2.423	1.00
91_T	101_A	2.376	1.00
74_K	84_P	2.371	1.00
156_H	169_N	2.318	1.00
158_K	181_G	2.317	1.00
102_V	113_L	2.293	1.00
412_A	420_I	2.246	1.00
160_I	180_E	2.234	1.00
190_E	194_R	2.232	1.00
164_I	196_K	2.225	1.00
408_S	427_V	2.204	1.00
84_P	109_K	2.195	1.00
135_P	270_Y	2.149	1.00
335_E	405_R	2.129	1.00
126_P	138_A	2.119	1.00
24_N	160_I	2.113	1.00
188_I	242_V	2.094	1.00
191_V	255_V	2.091	1.00
22_K	160_I	2.024	1.00
331_A	409_M	2.011	1.00
263_M	287_I	2.008	1.00
194_R	215_D	1.941	1.00
85_V	90_K	1.939	1.00
166_I	174_A	1.935	1.00
191_V	242_V	1.895	1.00
93_E	171_L	1.872	1.00
200_L	212_L	1.856	1.00
278_L	403_V	1.852	1.00
236_A	254_L	1.847	1.00
164_I	192_K	1.843	1.00
27_L	45_F	1.815	1.00
180_E	185_K	1.812	1.00
418_Y	422_L	1.799	1.00
9_Y	12_D	1.787	1.00
174_A	246_V	1.782	1.00
154_T	234_S	1.781	1.00
31_K	39_V	1.774	1.00
46_S	144_D	1.773	1.00
328_I	413_A	1.748	1.00
189_K	193_A	1.738	1.00
125_E	138_A	1.730	1.00
103_F	110_A	1.722	1.00
448_F	453_T	1.713	1.00
190_E	193_A	1.700	1.00
295_S	412_A	1.694	1.00
23_E	162_K	1.684	1.00
143_I	175_A	1.679	1.00
59_K	62_I	1.665	1.00
11_H	39_V	1.653	1.00
23_E	180_E	1.643	1.00
201_E	468_E	1.641	1.00
177_M	252_V	1.637	1.00
198_I	209_L	1.632	1.00
164_I	176_I	1.630	1.00
286_S	391_T	1.628	1.00
99_N	116_G	1.619	1.00
191_V	244_I	1.613	1.00
94_S	112_I	1.611	1.00
94_S	99_N	1.597	1.00
42_Y	102_V	1.577	1.00
18_L	29_K	1.572	1.00
287_I	401_F	1.553	1.00
269_Y	455_D	1.544	1.00
176_I	242_V	1.534	1.00
185_K	189_K	1.530	1.00
86_E	109_K	1.527	1.00
165_M	173_P	1.504	1.00
206_S	246_V	1.500	1.00
81_D	114_T	1.499	1.00
219_S	223_Q	1.495	1.00
15_A	19_P	1.494	1.00
170_K	202_D	1.493	1.00
257_V	262_L	1.492	1.00
286_S	340_L	1.489	0.99
444_P	447_F	1.481	0.99
147_L	161_T	1.465	0.99
163_K	173_P	1.445	0.99
294_S	385_I	1.436	0.99
241_R	261_I	1.430	0.99
21_L	96_L	1.428	0.99
54_V	100_C	1.418	0.99
91_T	110_A	1.416	0.99
165_M	171_L	1.399	0.99
290_T	392_V	1.391	0.99
10_I	103_F	1.389	0.99
277_S	281_S	1.384	0.99
430_H	434_Q	1.381	0.99
27_L	43_L	1.378	0.99
14_L	18_L	1.366	0.99
29_K	41_Y	1.365	0.99
47_E	147_L	1.361	0.99
193_A	197_N	1.355	0.99
299_T	420_I	1.355	0.99
182_K	468_E	1.352	0.99
224_I	253_L	1.350	0.99
244_I	255_V	1.349	0.99
192_K	196_K	1.323	0.99
14_L	31_K	1.322	0.99
233_V	252_V	1.315	0.99
170_K	238_F	1.314	0.99
154_T	238_F	1.307	0.99
219_S	430_H	1.302	0.99
285_A	336_V	1.300	0.99
50_D	117_K	1.297	0.99
326_P	329_F	1.290	0.99
338_I	386_A	1.288	0.99
281_S	285_A	1.287	0.99
47_E	148_A	1.281	0.98
337_T	363_V	1.274	0.98
143_I	245_L	1.265	0.98
49_T	54_V	1.262	0.98
54_V	115_T	1.254	0.98
10_I	105_N	1.253	0.98
131_V	265_S	1.250	0.98
83_R	90_K	1.245	0.98
139_F	150_I	1.243	0.98
369_V	380_I	1.242	0.98
125_E	136_K	1.235	0.98
339_E	406_F	1.225	0.98
127_T	136_K	1.209	0.98
12_D	15_A	1.198	0.98
123_L	137_V	1.179	0.97
407_I	411_S	1.169	0.97
169_N	468_E	1.168	0.97
158_K	180_E	1.155	0.97
223_Q	272_R	1.151	0.97
328_I	410_F	1.146	0.97
163_K	175_A	1.138	0.97
187_V	242_V	1.134	0.97
147_L	177_M	1.130	0.97
431_L	442_F	1.126	0.97
183_A	242_V	1.123	0.96
101_A	110_A	1.110	0.96
99_N	114_T	1.106	0.96
335_E	382_V	1.106	0.96
52_N	56_E	1.105	0.96
325_F	329_F	1.104	0.96
29_K	43_L	1.104	0.96
409_M	413_A	1.102	0.96
184_K	439_S	1.102	0.96
13_N	103_F	1.101	0.96
34_L	40_F	1.088	0.96
10_I	41_Y	1.083	0.96
30_N	82_A	1.079	0.96
33_M	39_V	1.065	0.95
137_V	152_Q	1.064	0.95
181_G	185_K	1.063	0.95
243_A	254_L	1.060	0.95
174_A	244_I	1.059	0.95
184_K	473_N	1.056	0.95
292_F	408_S	1.055	0.95
242_V	255_V	1.054	0.95
243_A	252_V	1.050	0.95
25_D	162_K	1.048	0.95
47_E	144_D	1.047	0.95
97_N	155_S	1.047	0.95
137_V	248_S	1.044	0.95
137_V	149_L	1.040	0.95
214_E	223_Q	1.038	0.95
193_A	196_K	1.037	0.94
319_N	376_S	1.035	0.94
327_P	378_L	1.032	0.94
233_V	254_L	1.031	0.94
221_F	404_L	1.030	0.94
254_L	261_I	1.028	0.94
16_L	20_K	1.028	0.94
130_K	350_N	1.027	0.94
335_E	402_R	1.027	0.94
118_K	142_D	1.021	0.94
17_V	27_L	1.019	0.94
177_M	237_L	1.011	0.94
191_V	437_F	1.011	0.94
204_Q	208_T	1.010	0.94
164_I	195_L	1.010	0.94
140_V	146_N	1.005	0.94
258_S	261_I	1.004	0.93
23_E	160_I	0.999	0.93
190_E	215_D	0.995	0.93
169_N	179_I	0.990	0.93
132_V	267_D	0.987	0.93
124_T	138_A	0.985	0.93
41_Y	103_F	0.985	0.93
280_R	455_D	0.982	0.93
332_L	409_M	0.980	0.93
263_M	284_F	0.980	0.93
48_M	148_A	0.976	0.93
31_K	41_Y	0.975	0.92
260_G	445_N	0.975	0.92
154_T	179_I	0.973	0.92
295_S	408_S	0.970	0.92
259_L	442_F	0.970	0.92
239_N	269_Y	0.969	0.92
335_E	406_F	0.966	0.92
404_L	427_V	0.963	0.92
345_G	353_G	0.963	0.92
389_S	398_G	0.958	0.92
49_T	115_T	0.955	0.92
99_N	112_I	0.955	0.92
169_N	182_K	0.954	0.92
211_E	462_I	0.953	0.92
298_I	331_A	0.952	0.92
14_L	43_L	0.950	0.91
118_K	152_Q	0.947	0.91
176_I	191_V	0.943	0.91
91_T	103_F	0.943	0.91
301_V	327_P	0.942	0.91
335_E	342_R	0.937	0.91
388_A	391_T	0.935	0.91
221_F	430_H	0.934	0.91
260_G	456_S	0.931	0.91
262_L	397_M	0.931	0.91
16_L	88_A	0.927	0.90
194_R	213_I	0.926	0.90
153_R	172_K	0.922	0.90
150_I	159_L	0.919	0.90
155_S	173_P	0.914	0.90
69_T	72_Q	0.913	0.90
338_I	357_G	0.913	0.90
278_L	339_E	0.910	0.90
93_E	165_M	0.901	0.89
59_K	63_K	0.897	0.89
172_K	246_V	0.891	0.89
150_I	233_V	0.887	0.88
235_S	239_N	0.885	0.88
148_A	152_Q	0.884	0.88
126_P	228_E	0.878	0.88
221_F	441_Y	0.875	0.88
85_V	101_A	0.874	0.88
11_H	15_A	0.873	0.88
85_V	91_T	0.873	0.88
72_Q	75_K	0.870	0.87
211_E	459_R	0.869	0.87
79_Q	113_L	0.869	0.87
356_I	386_A	0.867	0.87
445_N	457_I	0.866	0.87
182_K	201_E	0.864	0.87
26_D	151_R	0.863	0.87
129_E	232_K	0.862	0.87
43_L	103_F	0.862	0.87
460_L	465_K	0.861	0.87
225_Q	261_I	0.861	0.87
224_I	437_F	0.861	0.87
40_F	102_V	0.861	0.87
205_D	270_Y	0.860	0.87
221_F	427_V	0.860	0.87
410_F	413_A	0.857	0.87
303_F	414_I	0.856	0.87
152_Q	247_D	0.856	0.87
221_F	431_L	0.853	0.86
122_S	140_V	0.853	0.86
188_I	191_V	0.852	0.86
64_D	67_T	0.852	0.86
144_D	173_P	0.852	0.86
17_V	43_L	0.849	0.86
21_L	24_N	0.848	0.86
198_I	201_E	0.845	0.86
258_S	262_L	0.844	0.86
90_K	93_E	0.840	0.86
189_K	192_K	0.837	0.85
83_R	94_S	0.836	0.85
88_A	103_F	0.835	0.85
128_T	352_L	0.834	0.85
289_I	384_V	0.833	0.85
348_L	390_F	0.833	0.85
128_T	251_F	0.832	0.85
207_G	211_E	0.831	0.85
342_R	345_G	0.828	0.85
139_F	233_V	0.827	0.85
286_S	388_A	0.824	0.84
131_V	266_P	0.824	0.84
397_M	400_S	0.816	0.84
43_L	95_I	0.814	0.84
153_R	248_S	0.813	0.84
421_I	425_L	0.812	0.84
119_K	148_A	0.810	0.83
169_N	201_E	0.810	0.83
28_V	46_S	0.808	0.83
345_G	355_T	0.807	0.83
120_T	145_T	0.805	0.83
257_V	261_I	0.804	0.83
259_L	397_M	0.804	0.83
142_D	173_P	0.800	0.83
402_R	406_F	0.799	0.83
328_I	409_M	0.799	0.83
319_N	377_I	0.797	0.82
121_R	141_E	0.796	0.82
205_D	208_T	0.796	0.82
345_G	354_Q	0.794	0.82
220_P	430_H	0.791	0.82
408_S	411_S	0.789	0.82
232_K	266_P	0.788	0.82
449_S	452_N	0.784	0.81
20_K	92_I	0.783	0.81
225_Q	257_V	0.779	0.81
25_D	147_L	0.779	0.81
131_V	267_D	0.777	0.81
408_S	412_A	0.776	0.81
443_S	452_N	0.770	0.80
395_Y	399_L	0.770	0.80
451_K	454_D	0.767	0.80
184_K	474_E	0.766	0.80
467_K	470_N	0.764	0.80
339_E	342_R	0.764	0.80
406_F	410_F	0.763	0.80
214_E	217_K	0.761	0.79
227_T	243_A	0.761	0.79
259_L	391_T	0.760	0.79
197_N	435_T	0.758	0.79
21_L	92_I	0.757	0.79
451_K	467_K	0.757	0.79
40_F	104_I	0.756	0.79
204_Q	238_F	0.756	0.79
357_G	377_I	0.754	0.79
140_V	145_T	0.753	0.79
176_I	183_A	0.751	0.79
350_N	356_I	0.751	0.79
91_T	95_I	0.750	0.78
236_A	261_I	0.747	0.78
10_I	13_N	0.744	0.78
142_D	145_T	0.742	0.78
315_T	377_I	0.742	0.78
86_E	90_K	0.740	0.77
370_E	376_S	0.739	0.77
120_T	142_D	0.739	0.77
32_K	40_F	0.739	0.77
71_D	109_K	0.739	0.77
155_S	247_D	0.737	0.77
201_E	469_V	0.736	0.77
294_S	335_E	0.734	0.77
302_S	327_P	0.733	0.77
355_T	361_G	0.733	0.77
277_S	460_L	0.731	0.77
126_P	251_F	0.728	0.76
328_I	332_L	0.727	0.76
290_T	401_F	0.726	0.76
291_L	404_L	0.725	0.76
208_T	235_S	0.723	0.76
432_T	446_G	0.721	0.76
142_D	247_D	0.719	0.75
170_K	204_Q	0.716	0.75
147_L	175_A	0.715	0.75
203_I	209_L	0.714	0.75
327_P	357_G	0.714	0.75
271_E	399_L	0.713	0.75
150_I	234_S	0.713	0.75
404_L	407_I	0.713	0.75
262_L	360_G	0.711	0.75
133_R	138_A	0.708	0.74
207_G	212_L	0.707	0.74
53_K	115_T	0.706	0.74
304_H	417_L	0.705	0.74
278_L	336_V	0.704	0.74
296_I	300_L	0.702	0.74
200_L	203_I	0.702	0.74
382_V	406_F	0.701	0.74
58_I	113_L	0.701	0.74
262_L	402_R	0.700	0.73
235_S	264_Q	0.695	0.73
225_Q	262_L	0.694	0.73
71_D	74_K	0.693	0.73
260_G	284_F	0.691	0.73
320_R	323_V	0.691	0.73
439_S	472_P	0.690	0.72
149_L	152_Q	0.690	0.72
28_V	44_Y	0.688	0.72
258_S	439_S	0.688	0.72
454_D	460_L	0.688	0.72
33_M	37_G	0.686	0.72
47_E	118_K	0.686	0.72
319_N	361_G	0.685	0.72
454_D	467_K	0.683	0.72
133_R	210_E	0.681	0.71
116_G	144_D	0.678	0.71
233_V	420_I	0.676	0.71
18_L	43_L	0.676	0.71
443_S	447_F	0.674	0.71
84_P	111_Y	0.673	0.71
187_V	437_F	0.672	0.70
45_F	48_M	0.668	0.70
385_I	409_M	0.667	0.70
368_A	374_V	0.666	0.70
97_N	116_G	0.666	0.70
366_Q	383_S	0.665	0.70
325_F	373_L	0.663	0.69
124_T	127_T	0.663	0.69
259_L	287_I	0.662	0.69
322_N	383_S	0.662	0.69
24_N	27_L	0.661	0.69
255_V	437_F	0.659	0.69
177_M	245_L	0.658	0.69
17_V	41_Y	0.658	0.69
200_L	206_S	0.657	0.69
213_I	437_F	0.656	0.69
215_D	436_S	0.656	0.69
51_E	142_D	0.654	0.68
324_P	343_E	0.654	0.68
225_Q	236_A	0.652	0.68
27_L	179_I	0.652	0.68
357_G	362_V	0.651	0.68
15_A	68_L	0.650	0.68
334_M	378_L	0.649	0.68
262_L	394_Q	0.648	0.68
337_T	384_V	0.647	0.68
187_V	439_S	0.647	0.68
222_P	262_L	0.647	0.68
143_I	247_D	0.644	0.67
289_I	293_L	0.641	0.67
164_I	244_I	0.641	0.67
162_K	176_I	0.641	0.67
137_V	234_S	0.640	0.67
131_V	135_P	0.639	0.67
203_I	208_T	0.638	0.66
117_K	124_T	0.638	0.66
340_L	357_G	0.637	0.66
359_V	386_A	0.637	0.66
257_V	392_V	0.636	0.66
182_K	209_L	0.636	0.66
42_Y	100_C	0.635	0.66
97_N	173_P	0.635	0.66
452_N	468_E	0.633	0.66
436_S	440_P	0.632	0.66
324_P	367_A	0.632	0.66
346_L	351_P	0.632	0.66
331_A	382_V	0.631	0.66
39_V	105_N	0.631	0.66
23_E	192_K	0.631	0.66
296_I	445_N	0.628	0.65
241_R	264_Q	0.627	0.65
409_M	412_A	0.627	0.65
305_Q	327_P	0.626	0.65
320_R	366_Q	0.626	0.65
313_A	352_L	0.625	0.65
150_I	352_L	0.624	0.65
54_V	79_Q	0.624	0.65
357_G	435_T	0.623	0.65
16_L	19_P	0.623	0.65
77_L	82_A	0.623	0.65
290_T	389_S	0.623	0.65
345_G	351_P	0.623	0.65
292_F	420_I	0.621	0.64
81_D	142_D	0.621	0.64
32_K	42_Y	0.618	0.64
58_I	100_C	0.618	0.64
369_V	376_S	0.617	0.64
243_A	255_V	0.615	0.64
266_P	270_Y	0.614	0.64
258_S	357_G	0.614	0.64
73_V	253_L	0.614	0.64
129_E	286_S	0.613	0.63
226_N	251_F	0.612	0.63
290_T	294_S	0.610	0.63
341_L	379_V	0.610	0.63
179_I	195_L	0.609	0.63
454_D	465_K	0.608	0.63
206_S	253_L	0.608	0.63
271_E	396_G	0.608	0.63
395_Y	398_G	0.607	0.63
428_Y	432_T	0.606	0.62
264_Q	280_R	0.604	0.62
304_H	416_G	0.604	0.62
420_I	423_F	0.603	0.62
220_P	403_V	0.603	0.62
186_S	189_K	0.602	0.62
123_L	149_L	0.601	0.62
335_E	409_M	0.600	0.62
93_E	285_A	0.600	0.62
42_Y	113_L	0.600	0.62
320_R	375_S	0.599	0.62
298_I	303_F	0.594	0.61
348_L	361_G	0.592	0.61
86_E	89_K	0.591	0.61
158_K	169_N	0.591	0.61
216_N	223_Q	0.590	0.60
225_Q	254_L	0.590	0.60
103_F	111_Y	0.586	0.60
372_N	447_F	0.586	0.60
190_E	213_I	0.585	0.60
153_R	234_S	0.585	0.60
31_K	74_K	0.584	0.60
293_L	384_V	0.583	0.60
258_S	301_V	0.583	0.60
58_I	78_D	0.582	0.59
257_V	337_T	0.582	0.59
294_S	381_V	0.581	0.59
17_V	103_F	0.581	0.59
227_T	393_P	0.581	0.59
213_I	224_I	0.580	0.59
81_D	154_T	0.580	0.59
142_D	152_Q	0.580	0.59
342_R	404_L	0.579	0.59
185_K	188_I	0.579	0.59
455_D	459_R	0.579	0.59
11_H	31_K	0.577	0.59
119_K	145_T	0.577	0.59
388_A	448_F	0.577	0.59
17_V	29_K	0.576	0.59
341_L	363_V	0.576	0.59
200_L	462_I	0.575	0.58
120_T	140_V	0.575	0.58
70_L	111_Y	0.575	0.58
9_Y	14_L	0.574	0.58
19_P	22_K	0.574	0.58
46_S	51_E	0.574	0.58
223_Q	364_I	0.573	0.58
220_P	275_S	0.572	0.58
56_E	59_K	0.572	0.58
373_L	380_I	0.572	0.58
25_D	163_K	0.570	0.58
236_A	241_R	0.570	0.58
323_V	375_S	0.570	0.58
348_L	352_L	0.568	0.58
308_L	311_A	0.568	0.58
138_A	251_F	0.568	0.58
194_R	436_S	0.567	0.57
218_Y	464_N	0.567	0.57
455_D	465_K	0.567	0.57
126_P	270_Y	0.566	0.57
263_M	397_M	0.566	0.57
407_I	427_V	0.566	0.57
33_M	75_K	0.566	0.57
94_S	166_I	0.564	0.57
133_R	206_S	0.564	0.57
82_A	111_Y	0.563	0.57
136_K	251_F	0.561	0.57
210_E	226_N	0.561	0.57
327_P	362_V	0.560	0.57
153_R	229_R	0.560	0.57
200_L	468_E	0.560	0.57
453_T	456_S	0.559	0.56
143_I	173_P	0.559	0.56
162_K	180_E	0.558	0.56
449_S	470_N	0.557	0.56
287_I	392_V	0.557	0.56
324_P	416_G	0.557	0.56
198_I	212_L	0.557	0.56
294_S	409_M	0.555	0.56
295_S	395_Y	0.554	0.56
147_L	239_N	0.553	0.56
273_W	361_G	0.553	0.56
341_L	359_V	0.548	0.55
275_S	316_I	0.547	0.55
217_K	463_K	0.547	0.55
308_L	351_P	0.547	0.55
410_F	414_I	0.546	0.55
307_L	395_Y	0.546	0.55
217_K	272_R	0.546	0.55
137_V	172_K	0.546	0.55
203_I	246_V	0.545	0.54
358_L	380_I	0.545	0.54
205_D	209_L	0.544	0.54
48_M	152_Q	0.544	0.54
12_D	37_G	0.544	0.54
459_R	462_I	0.543	0.54
422_L	426_V	0.543	0.54
49_T	185_K	0.543	0.54
225_Q	232_K	0.542	0.54
60_T	63_K	0.542	0.54
286_S	471_N	0.540	0.54
356_I	380_I	0.540	0.54
184_K	468_E	0.539	0.54
229_R	254_L	0.539	0.54
124_T	414_I	0.538	0.54
183_A	187_V	0.538	0.54
424_M	427_V	0.537	0.53
169_N	238_F	0.537	0.53
288_F	292_F	0.537	0.53
296_I	417_L	0.536	0.53
46_S	81_D	0.535	0.53
239_N	242_V	0.535	0.53
190_E	197_N	0.535	0.53
301_V	313_A	0.535	0.53
58_I	62_I	0.534	0.53
21_L	156_H	0.534	0.53
295_S	335_E	0.534	0.53
104_I	467_K	0.533	0.53
361_G	364_I	0.533	0.53
450_L	454_D	0.532	0.53
375_S	416_G	0.531	0.53
408_S	424_M	0.531	0.53
459_R	465_K	0.530	0.52
16_L	92_I	0.530	0.52
40_F	82_A	0.530	0.52
90_K	94_S	0.530	0.52
268_D	343_E	0.529	0.52
267_D	392_V	0.528	0.52
397_M	401_F	0.528	0.52
88_A	91_T	0.528	0.52
20_K	88_A	0.527	0.52
174_A	209_L	0.527	0.52
239_N	264_Q	0.525	0.52
73_V	79_Q	0.525	0.52
168_E	185_K	0.525	0.52
191_V	346_L	0.524	0.52
220_P	229_R	0.524	0.52
409_M	415_L	0.522	0.51
182_K	199_Q	0.522	0.51
296_I	420_I	0.522	0.51
17_V	21_L	0.521	0.51
10_I	39_V	0.521	0.51
363_V	431_L	0.521	0.51
118_K	144_D	0.520	0.51
21_L	95_I	0.520	0.51
445_N	456_S	0.520	0.51
348_L	373_L	0.519	0.51
344_A	386_A	0.519	0.51
181_G	474_E	0.519	0.51
299_T	412_A	0.519	0.51
97_N	195_L	0.519	0.51
297_Y	416_G	0.519	0.51
261_I	264_Q	0.519	0.51
31_K	58_I	0.519	0.51
71_D	197_N	0.518	0.51
187_V	473_N	0.516	0.51
182_K	469_V	0.515	0.50
140_V	467_K	0.515	0.50
298_I	413_A	0.515	0.50
20_K	157_P	0.515	0.50
408_S	420_I	0.515	0.50
49_T	117_K	0.515	0.50
92_I	95_I	0.514	0.50
332_L	336_V	0.513	0.50
338_I	345_G	0.513	0.50
104_I	107_L	0.513	0.50
187_V	190_E	0.512	0.50
310_T	366_Q	0.512	0.50
382_V	409_M	0.512	0.50
140_V	289_I	0.512	0.50
452_N	469_V	0.511	0.50
35_A	64_D	0.511	0.50
263_M	316_I	0.511	0.50
82_A	113_L	0.510	0.50
136_K	228_E	0.510	0.50
318_A	322_N	0.510	0.50
264_Q	269_Y	0.509	0.50
181_G	307_L	0.509	0.50
471_N	474_E	0.509	0.50
343_E	367_A	0.509	0.50
139_F	146_N	0.508	0.50
10_I	91_T	0.508	0.50
58_I	340_L	0.508	0.50
343_E	347_R	0.508	0.50
354_Q	360_G	0.507	0.49
185_K	192_K	0.507	0.49
9_Y	17_V	0.507	0.49
176_I	311_A	0.506	0.49
203_I	467_K	0.506	0.49
149_L	153_R	0.506	0.49
307_L	386_A	0.506	0.49
257_V	260_G	0.506	0.49
269_Y	454_D	0.505	0.49
208_T	462_I	0.504	0.49
407_I	426_V	0.503	0.49
450_L	453_T	0.503	0.49
297_Y	311_A	0.503	0.49
323_V	380_I	0.503	0.49
188_I	289_I	0.502	0.49
211_E	387_L	0.502	0.49
261_I	345_G	0.502	0.49
9_Y	199_Q	0.501	0.49
86_E	108_D	0.501	0.49
140_V	173_P	0.500	0.48
21_L	27_L	0.500	0.48
129_E	319_N	0.500	0.48
199_Q	468_E	0.500	0.48
176_I	188_I	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3hh1A	2	0.2158	26.1	0.981	Contact Map
3kpeA	3	0.1017	21	0.982	Contact Map
4p0zA	1	0.2075	18.2	0.983	Contact Map
4g3oA	1	0.0913	14.2	0.983	Contact Map
3h0lB	1	0.2261	14	0.984	Contact Map
1ez3A	1	0.2282	13.8	0.984	Contact Map
1t5iA	1	0.3278	12.9	0.984	Contact Map
4bemA	3	0.168	12.3	0.984	Contact Map
2qwvA	2	0.3216	8.9	0.985	Contact Map
1xtiA	1	0.3631	8.5	0.985	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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