PBUO - BACSU - GREMLIN Contacts

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PBUO - Guanine/hypoxanthine permease PbuO

UniProt:	O34978	Sequences: MFHLKEQQTSIKQEIIAGLTTFFTMVYIVVVNPVILANAGVPFDQVFTATIIASIVGTLWMALAANYPIAIAPGMGLNAYLAFHVVSASDGGITYATAFSAVFTAGVLFIILSLTPLRKQLIEAIPNNLKYGITTGIGLFIAFIGLRQAGIVAADESNLVTLGNLHSPGVILTLVGLLISVVLMVLNVSGALFIGMAATALIAFFTGQLHFSKGFMSLPHLPEGLMISNPFTAFGDVIHHGLYAVVFSFLLVTIFDTTGTMIGVAEQAGLMKNNKLPNVRKALLADSTATTVGAVFGTSPTTAFIESSAGVAAGGRTGLTALTVAVMFAASMFFSPLVSALSGIAAITSPALIIVGSLMMGSVSNMNWKEMDEAFPAFLVILAMPLTSSISTGIALGFISYPIVKAARGKWREIHPLVIVFAILFFIQLFIL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	432 (422)
Sequences:	3195 (1816)
Seq/√Len:	88.4

BACSU - PBUO
HALSA - Q9HNG4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
4_L	9_T	4.623	1.00
3_H	6_E	4.351	1.00
155_D	161_T	3.947	1.00
62_A	322_L	3.901	1.00
17_A	315_G	3.553	1.00
402_P	422_A	3.508	1.00
38_N	83_F	3.283	1.00
410_K	413_E	3.165	1.00
315_G	320_T	3.131	1.00
57_G	289_A	3.123	1.00
379_L	400_S	3.066	1.00
264_V	311_V	3.032	1.00
11_I	319_L	2.998	1.00
4_L	319_L	2.959	1.00
59_L	325_A	2.875	1.00
15_I	323_T	2.855	1.00
55_I	329_A	2.813	1.00
70_A	324_V	2.708	1.00
29_V	51_I	2.683	1.00
69_I	303_A	2.633	1.00
4_L	11_I	2.560	1.00
107_V	111_I	2.420	1.00
221_L	224_G	2.419	1.00
176_G	199_T	2.397	1.00
180_S	195_G	2.376	1.00
405_K	413_E	2.284	1.00
17_A	320_T	2.250	1.00
7_Q	317_T	2.232	1.00
172_L	199_T	2.218	1.00
192_L	351_A	2.145	1.00
184_M	358_L	2.105	1.00
15_I	19_L	2.075	1.00
3_H	66_N	2.059	1.00
10_S	13_Q	2.058	1.00
175_V	202_I	2.058	1.00
233_A	236_D	2.047	1.00
75_M	78_N	2.044	1.00
149_A	173_T	2.029	1.00
143_F	386_L	2.022	1.00
414_I	419_I	1.997	1.00
55_I	59_L	1.968	1.00
59_L	63_L	1.961	1.00
326_V	330_A	1.944	1.00
194_I	198_A	1.943	1.00
363_V	381_I	1.938	1.00
58_T	325_A	1.933	1.00
147_R	159_L	1.930	1.00
85_V	249_F	1.916	1.00
183_L	194_I	1.899	1.00
411_W	419_I	1.894	1.00
179_I	198_A	1.883	1.00
177_L	353_I	1.856	1.00
59_L	322_L	1.846	1.00
406_A	411_W	1.832	1.00
181_V	375_F	1.811	1.00
60_W	64_A	1.804	1.00
371_M	375_F	1.785	1.00
29_V	331_S	1.781	1.00
221_L	225_L	1.772	1.00
372_D	408_R	1.760	1.00
182_V	407_A	1.756	1.00
56_V	296_F	1.749	1.00
342_S	345_A	1.728	1.00
406_A	419_I	1.726	1.00
220_H	224_G	1.725	1.00
15_I	327_M	1.722	1.00
147_R	388_S	1.700	1.00
143_F	147_R	1.699	1.00
216_M	334_F	1.697	1.00
110_I	291_T	1.695	1.00
323_T	326_V	1.689	1.00
175_V	179_I	1.689	1.00
184_M	354_I	1.684	1.00
154_A	159_L	1.671	1.00
119_K	123_E	1.660	1.00
143_F	160_V	1.654	1.00
100_S	234_F	1.622	1.00
32_N	78_N	1.615	1.00
364_S	369_K	1.615	1.00
164_N	167_S	1.602	1.00
222_P	225_L	1.601	1.00
56_V	292_V	1.600	1.00
411_W	414_I	1.591	1.00
54_S	72_A	1.579	1.00
96_A	228_S	1.567	1.00
128_N	373_E	1.562	1.00
28_I	32_N	1.554	1.00
372_D	405_K	1.549	1.00
145_G	353_I	1.545	1.00
55_I	325_A	1.539	1.00
201_L	205_F	1.534	1.00
380_V	397_G	1.532	1.00
184_M	191_A	1.516	1.00
67_Y	276_L	1.508	1.00
48_T	332_M	1.507	1.00
37_A	43_F	1.491	1.00
403_I	407_A	1.489	1.00
94_T	97_T	1.466	0.99
379_L	396_L	1.465	0.99
278_N	281_K	1.447	0.99
38_N	82_A	1.440	0.99
131_Y	365_N	1.432	0.99
74_G	302_T	1.425	0.99
266_E	365_N	1.410	0.99
183_L	188_V	1.386	0.99
189_S	313_A	1.385	0.99
171_I	175_V	1.372	0.99
366_M	374_A	1.371	0.99
229_N	295_V	1.364	0.99
383_A	396_L	1.356	0.99
19_L	327_M	1.356	0.99
152_V	387_T	1.354	0.99
123_E	275_K	1.352	0.99
182_V	403_I	1.350	0.99
135_T	363_V	1.342	0.99
41_V	46_V	1.340	0.99
180_S	354_I	1.340	0.99
60_W	285_A	1.337	0.99
119_K	280_R	1.334	0.99
261_M	282_A	1.332	0.99
103_F	294_A	1.328	0.99
220_H	223_E	1.327	0.99
53_A	301_T	1.322	0.99
25_M	70_A	1.313	0.99
324_V	331_S	1.312	0.99
180_S	184_M	1.301	0.99
382_L	386_L	1.292	0.99
253_T	300_P	1.288	0.99
221_L	226_M	1.279	0.99
405_K	410_K	1.259	0.98
41_V	95_Y	1.255	0.98
13_Q	17_A	1.253	0.98
146_L	353_I	1.249	0.98
176_G	350_P	1.237	0.98
114_L	284_L	1.231	0.98
197_A	201_L	1.229	0.98
82_A	87_S	1.225	0.98
67_Y	278_N	1.224	0.98
118_R	286_D	1.224	0.98
71_I	301_T	1.210	0.98
32_N	35_I	1.209	0.98
360_M	381_I	1.202	0.98
402_P	414_I	1.200	0.98
100_S	237_V	1.197	0.98
253_T	290_T	1.191	0.98
416_P	420_V	1.190	0.98
426_F	430_F	1.186	0.98
32_N	50_T	1.177	0.97
4_L	7_Q	1.171	0.97
110_I	284_L	1.168	0.97
271_M	276_L	1.165	0.97
415_H	419_I	1.157	0.97
107_V	291_T	1.154	0.97
178_L	403_I	1.146	0.97
167_S	170_V	1.146	0.97
221_L	227_I	1.141	0.97
7_Q	278_N	1.140	0.97
291_T	294_A	1.139	0.97
319_L	323_T	1.138	0.97
179_I	195_G	1.137	0.97
368_W	374_A	1.136	0.97
205_F	209_L	1.134	0.97
32_N	75_M	1.131	0.97
4_L	10_S	1.131	0.97
222_P	226_M	1.131	0.97
200_A	341_L	1.128	0.97
234_F	237_V	1.128	0.97
319_L	322_L	1.127	0.97
67_Y	282_A	1.126	0.97
62_A	321_A	1.121	0.97
220_H	225_L	1.121	0.97
172_L	206_T	1.119	0.97
257_T	303_A	1.115	0.96
288_T	292_V	1.112	0.96
181_V	404_V	1.106	0.96
179_I	202_I	1.100	0.96
31_V	75_M	1.096	0.96
116_P	280_R	1.096	0.96
4_L	66_N	1.095	0.96
51_I	55_I	1.091	0.96
104_T	242_L	1.089	0.96
400_S	404_V	1.083	0.96
221_L	228_S	1.080	0.96
202_I	206_T	1.076	0.96
85_V	245_V	1.074	0.96
110_I	287_S	1.074	0.96
373_E	405_K	1.073	0.96
183_L	191_A	1.072	0.96
172_L	203_A	1.065	0.95
132_G	380_V	1.053	0.95
30_V	339_S	1.051	0.95
325_A	329_A	1.050	0.95
15_I	326_V	1.049	0.95
265_A	269_G	1.049	0.95
142_A	378_F	1.047	0.95
233_A	238_I	1.047	0.95
266_E	271_M	1.043	0.95
323_T	327_M	1.043	0.95
79_A	83_F	1.042	0.95
105_A	253_T	1.039	0.95
111_I	115_T	1.037	0.95
156_E	159_L	1.033	0.95
349_S	353_I	1.031	0.95
383_A	387_T	1.029	0.94
287_S	291_T	1.021	0.94
54_S	58_T	1.019	0.94
106_G	290_T	1.018	0.94
224_G	227_I	1.017	0.94
15_I	319_L	1.014	0.94
185_V	375_F	1.014	0.94
423_I	427_I	1.011	0.94
395_A	429_L	1.011	0.94
157_S	161_T	1.011	0.94
12_K	16_I	1.010	0.94
215_F	337_L	1.009	0.94
4_L	323_T	1.006	0.94
225_L	228_S	1.002	0.94
200_A	340_A	1.000	0.94
81_L	99_F	1.000	0.94
144_I	388_S	0.999	0.94
135_T	381_I	0.995	0.93
372_D	376_P	0.995	0.93
186_L	409_G	0.991	0.93
121_L	254_I	0.989	0.93
330_A	334_F	0.984	0.93
24_T	309_A	0.981	0.93
147_R	154_A	0.981	0.93
292_V	296_F	0.978	0.93
16_I	313_A	0.976	0.93
185_V	371_M	0.975	0.93
267_Q	312_A	0.970	0.93
272_K	275_K	0.970	0.93
142_A	382_L	0.968	0.92
25_M	304_F	0.965	0.92
175_V	206_T	0.964	0.92
66_N	317_T	0.962	0.92
223_E	226_M	0.961	0.92
370_E	405_K	0.961	0.92
120_Q	417_L	0.960	0.92
292_V	295_V	0.957	0.92
151_I	353_I	0.952	0.92
224_G	228_S	0.952	0.92
155_D	158_N	0.950	0.92
212_S	215_F	0.946	0.92
69_I	270_L	0.943	0.91
205_F	208_Q	0.939	0.91
180_S	192_L	0.936	0.91
250_L	254_I	0.930	0.91
13_Q	189_S	0.927	0.91
220_H	227_I	0.926	0.91
112_L	250_L	0.923	0.91
61_M	71_I	0.921	0.91
199_T	203_A	0.919	0.90
48_T	52_I	0.918	0.90
331_S	335_S	0.911	0.90
134_T	263_G	0.911	0.90
80_Y	85_V	0.910	0.90
218_L	222_P	0.908	0.90
69_I	264_V	0.904	0.90
215_F	334_F	0.903	0.90
39_A	46_V	0.900	0.89
35_I	82_A	0.900	0.89
101_A	245_V	0.898	0.89
270_L	303_A	0.897	0.89
289_A	301_T	0.893	0.89
253_T	302_T	0.892	0.89
290_T	300_P	0.891	0.89
49_A	298_T	0.888	0.89
97_T	236_D	0.887	0.89
216_M	221_L	0.886	0.89
64_A	284_L	0.883	0.89
227_I	295_V	0.882	0.89
26_V	29_V	0.882	0.89
158_N	161_T	0.879	0.88
195_G	351_A	0.878	0.88
219_P	229_N	0.877	0.88
320_T	324_V	0.876	0.88
179_I	194_I	0.875	0.88
39_A	86_V	0.872	0.88
220_H	226_M	0.870	0.88
379_L	383_A	0.869	0.88
127_N	131_Y	0.869	0.88
360_M	363_V	0.869	0.88
233_A	237_V	0.866	0.88
42_P	45_Q	0.863	0.87
84_H	88_A	0.861	0.87
104_T	246_V	0.860	0.87
132_G	381_I	0.857	0.87
398_F	421_F	0.855	0.87
146_L	151_I	0.855	0.87
53_A	296_F	0.853	0.87
103_F	295_V	0.851	0.87
143_F	152_V	0.846	0.86
41_V	96_A	0.845	0.86
50_T	78_N	0.843	0.86
175_V	198_A	0.842	0.86
44_D	48_T	0.842	0.86
257_T	287_S	0.841	0.86
154_A	158_N	0.840	0.86
370_E	410_K	0.838	0.86
120_Q	123_E	0.837	0.86
182_V	408_R	0.835	0.86
133_I	251_L	0.834	0.86
57_G	301_T	0.834	0.86
253_T	286_D	0.833	0.86
356_G	378_F	0.832	0.85
6_E	66_N	0.832	0.85
72_A	304_F	0.830	0.85
64_A	281_K	0.829	0.85
409_G	412_R	0.828	0.85
203_A	209_L	0.826	0.85
111_I	114_L	0.825	0.85
308_S	312_A	0.824	0.85
30_V	341_L	0.821	0.85
113_S	284_L	0.816	0.84
105_A	300_P	0.814	0.84
58_T	322_L	0.813	0.84
172_L	202_I	0.812	0.84
29_V	47_F	0.809	0.84
84_H	87_S	0.809	0.84
139_L	360_M	0.808	0.84
30_V	34_V	0.802	0.83
83_F	87_S	0.802	0.83
80_Y	84_H	0.802	0.83
139_L	385_P	0.802	0.83
366_M	378_F	0.800	0.83
100_S	235_G	0.796	0.83
226_M	229_N	0.794	0.83
34_V	43_F	0.794	0.83
28_I	78_N	0.793	0.83
190_G	313_A	0.793	0.83
219_P	333_F	0.788	0.82
7_Q	270_L	0.788	0.82
77_L	256_D	0.783	0.82
389_S	392_T	0.782	0.82
153_A	157_S	0.775	0.81
217_S	220_H	0.774	0.81
194_I	197_A	0.773	0.81
105_A	250_L	0.773	0.81
174_L	178_L	0.771	0.81
57_G	292_V	0.769	0.81
62_A	285_A	0.769	0.81
69_I	263_G	0.767	0.80
253_T	257_T	0.766	0.80
218_L	224_G	0.753	0.79
143_F	159_L	0.753	0.79
265_A	276_L	0.751	0.79
85_V	101_A	0.750	0.79
173_T	353_I	0.750	0.79
30_V	338_V	0.746	0.79
46_V	49_A	0.744	0.78
372_D	410_K	0.742	0.78
195_G	199_T	0.739	0.78
258_T	368_W	0.739	0.78
54_S	57_G	0.736	0.78
11_I	15_I	0.733	0.77
254_I	428_Q	0.730	0.77
35_I	157_S	0.729	0.77
361_G	364_S	0.729	0.77
200_A	345_A	0.728	0.77
322_L	326_V	0.727	0.77
235_G	239_H	0.727	0.77
179_I	199_T	0.726	0.77
21_T	70_A	0.724	0.76
115_T	119_K	0.723	0.76
153_A	160_V	0.722	0.76
404_V	408_R	0.721	0.76
396_L	400_S	0.720	0.76
181_V	354_I	0.720	0.76
223_E	228_S	0.719	0.76
28_I	50_T	0.718	0.76
53_A	57_G	0.717	0.76
157_S	160_V	0.717	0.76
32_N	299_S	0.716	0.76
402_P	418_V	0.715	0.76
357_S	374_A	0.714	0.76
218_L	221_L	0.714	0.76
218_L	223_E	0.713	0.75
403_I	409_G	0.713	0.75
267_Q	362_S	0.713	0.75
363_V	368_W	0.708	0.75
18_G	323_T	0.707	0.75
63_L	66_N	0.705	0.75
204_F	209_L	0.703	0.74
293_G	302_T	0.702	0.74
360_M	378_F	0.701	0.74
132_G	377_A	0.701	0.74
383_A	392_T	0.698	0.74
283_L	425_F	0.697	0.74
54_S	71_I	0.696	0.74
366_M	377_A	0.695	0.74
193_F	342_S	0.694	0.73
63_L	322_L	0.694	0.73
132_G	366_M	0.693	0.73
421_F	424_L	0.693	0.73
124_A	417_L	0.692	0.73
154_A	157_S	0.692	0.73
35_I	78_N	0.690	0.73
37_A	83_F	0.689	0.73
101_A	242_L	0.687	0.73
219_P	227_I	0.686	0.73
217_S	221_L	0.685	0.72
155_D	160_V	0.684	0.72
88_A	91_G	0.684	0.72
58_T	321_A	0.683	0.72
203_A	208_Q	0.680	0.72
395_A	399_I	0.680	0.72
173_T	349_S	0.674	0.71
186_L	189_S	0.673	0.71
196_M	342_S	0.670	0.71
9_T	319_L	0.669	0.71
237_V	241_G	0.668	0.71
119_K	275_K	0.668	0.71
34_V	83_F	0.667	0.70
287_S	290_T	0.666	0.70
158_N	162_L	0.662	0.70
380_V	384_M	0.661	0.70
156_E	161_T	0.661	0.70
24_T	405_K	0.661	0.70
265_A	268_A	0.661	0.70
51_I	332_M	0.659	0.70
180_S	351_A	0.658	0.69
41_V	45_Q	0.658	0.69
212_S	216_M	0.657	0.69
21_T	310_G	0.656	0.69
235_G	238_I	0.654	0.69
180_S	199_T	0.652	0.69
57_G	285_A	0.649	0.68
200_A	342_S	0.648	0.68
146_L	383_A	0.647	0.68
103_F	291_T	0.646	0.68
80_Y	83_F	0.643	0.68
172_L	208_Q	0.643	0.68
327_M	330_A	0.642	0.68
28_I	304_F	0.642	0.68
395_A	425_F	0.641	0.67
108_L	111_I	0.638	0.67
171_I	174_L	0.638	0.67
177_L	354_I	0.635	0.67
178_L	182_V	0.635	0.67
196_M	345_A	0.635	0.67
150_G	167_S	0.633	0.66
133_I	421_F	0.631	0.66
149_A	349_S	0.630	0.66
59_L	285_A	0.629	0.66
36_L	299_S	0.629	0.66
51_I	54_S	0.628	0.66
109_F	300_P	0.628	0.66
387_T	392_T	0.628	0.66
129_L	418_V	0.626	0.66
80_Y	248_S	0.625	0.65
60_W	292_V	0.625	0.65
155_D	159_L	0.625	0.65
175_V	199_T	0.624	0.65
159_L	162_L	0.624	0.65
392_T	428_Q	0.624	0.65
129_L	398_F	0.622	0.65
251_L	395_A	0.622	0.65
165_L	168_P	0.620	0.65
70_A	304_F	0.619	0.65
256_D	260_T	0.618	0.65
93_I	97_T	0.617	0.64
160_V	387_T	0.617	0.64
78_N	299_S	0.614	0.64
59_L	329_A	0.614	0.64
152_V	160_V	0.612	0.64
257_T	290_T	0.610	0.64
261_M	300_P	0.610	0.64
177_L	379_L	0.608	0.63
267_Q	361_G	0.607	0.63
2_F	9_T	0.606	0.63
128_N	377_A	0.603	0.63
326_V	412_R	0.603	0.63
24_T	303_A	0.601	0.62
224_G	229_N	0.600	0.62
173_T	177_L	0.600	0.62
392_T	429_L	0.600	0.62
77_L	302_T	0.599	0.62
37_A	46_V	0.598	0.62
100_S	229_N	0.597	0.62
154_A	160_V	0.596	0.62
288_T	291_T	0.595	0.62
121_L	265_A	0.593	0.61
83_F	86_V	0.592	0.61
225_L	229_N	0.592	0.61
182_V	186_L	0.591	0.61
19_L	323_T	0.591	0.61
219_P	224_G	0.591	0.61
291_T	303_A	0.590	0.61
204_F	208_Q	0.588	0.61
74_G	253_T	0.586	0.61
56_V	60_W	0.586	0.61
64_A	288_T	0.586	0.61
34_V	38_N	0.585	0.60
291_T	295_V	0.585	0.60
202_I	205_F	0.584	0.60
32_N	79_A	0.583	0.60
71_I	253_T	0.583	0.60
70_A	351_A	0.582	0.60
354_I	375_F	0.582	0.60
354_I	358_L	0.582	0.60
42_P	46_V	0.581	0.60
87_S	93_I	0.581	0.60
39_A	87_S	0.579	0.60
69_I	276_L	0.578	0.59
53_A	293_G	0.577	0.59
276_L	279_V	0.577	0.59
110_I	114_L	0.576	0.59
367_N	373_E	0.575	0.59
268_A	271_M	0.575	0.59
147_R	150_G	0.575	0.59
86_V	94_T	0.573	0.59
137_I	256_D	0.573	0.59
108_L	250_L	0.572	0.59
238_I	242_L	0.572	0.59
414_I	422_A	0.571	0.59
13_Q	315_G	0.571	0.59
45_Q	224_G	0.570	0.58
100_S	104_T	0.569	0.58
109_F	113_S	0.566	0.58
257_T	391_S	0.565	0.58
25_M	72_A	0.563	0.57
85_V	93_I	0.563	0.57
423_I	426_F	0.560	0.57
153_A	159_L	0.560	0.57
177_L	400_S	0.560	0.57
250_L	264_V	0.557	0.57
4_L	8_Q	0.556	0.57
334_F	338_V	0.556	0.57
216_M	333_F	0.555	0.56
179_I	183_L	0.554	0.56
253_T	303_A	0.553	0.56
5_K	8_Q	0.552	0.56
122_I	258_T	0.552	0.56
4_L	15_I	0.551	0.56
271_M	279_V	0.551	0.56
170_V	173_T	0.551	0.56
238_I	241_G	0.550	0.56
26_V	309_A	0.550	0.56
69_I	282_A	0.550	0.56
34_V	37_A	0.549	0.56
210_H	213_K	0.548	0.55
157_S	343_G	0.548	0.55
50_T	75_M	0.546	0.55
134_T	266_E	0.546	0.55
218_L	225_L	0.545	0.55
109_F	287_S	0.545	0.55
258_T	290_T	0.544	0.55
173_T	344_I	0.544	0.55
157_S	382_L	0.543	0.55
122_I	207_G	0.542	0.55
379_L	404_V	0.542	0.55
218_L	226_M	0.541	0.55
61_M	286_D	0.541	0.55
91_G	245_V	0.541	0.55
175_V	205_F	0.540	0.54
365_N	369_K	0.540	0.54
211_F	214_G	0.539	0.54
109_F	252_V	0.538	0.54
216_M	220_H	0.537	0.54
312_A	358_L	0.535	0.54
381_I	384_M	0.535	0.54
58_T	63_L	0.535	0.54
234_F	238_I	0.534	0.54
81_L	249_F	0.534	0.54
5_K	107_V	0.533	0.53
131_Y	135_T	0.533	0.53
77_L	252_V	0.533	0.53
131_Y	366_M	0.532	0.53
136_G	384_M	0.532	0.53
204_F	340_A	0.531	0.53
236_D	240_H	0.530	0.53
241_G	244_A	0.529	0.53
3_H	7_Q	0.528	0.53
190_G	194_I	0.528	0.53
153_A	161_T	0.527	0.53
222_P	227_I	0.527	0.53
98_A	102_V	0.527	0.53
177_L	371_M	0.527	0.53
372_D	404_V	0.526	0.53
99_F	296_F	0.526	0.53
102_V	249_F	0.526	0.53
86_V	98_A	0.525	0.52
59_L	62_A	0.525	0.52
20_T	309_A	0.524	0.52
58_T	70_A	0.524	0.52
284_L	291_T	0.524	0.52
97_T	249_F	0.523	0.52
43_F	47_F	0.521	0.52
133_I	262_I	0.520	0.52
198_A	205_F	0.520	0.52
7_Q	10_S	0.520	0.52
2_F	7_Q	0.519	0.52
165_L	174_L	0.518	0.51
154_A	162_L	0.518	0.51
330_A	333_F	0.518	0.51
406_A	414_I	0.517	0.51
21_T	25_M	0.517	0.51
166_H	170_V	0.517	0.51
73_P	298_T	0.514	0.51
373_E	376_P	0.514	0.51
217_S	339_S	0.514	0.51
47_F	335_S	0.512	0.51
184_M	371_M	0.511	0.50
181_V	185_V	0.510	0.50
13_Q	16_I	0.508	0.50
181_V	357_S	0.507	0.50
112_L	193_F	0.507	0.50
207_G	210_H	0.507	0.50
131_Y	266_E	0.507	0.50
54_S	301_T	0.507	0.50
70_A	277_P	0.507	0.50
42_P	95_Y	0.506	0.50
265_A	271_M	0.506	0.50
100_S	236_D	0.505	0.50
28_I	299_S	0.505	0.50
154_A	161_T	0.505	0.50
326_V	329_A	0.504	0.50
142_A	388_S	0.504	0.50
145_G	182_V	0.504	0.50
116_P	415_H	0.503	0.49
146_L	152_V	0.503	0.49
163_G	170_V	0.503	0.49
188_V	327_M	0.503	0.49
32_N	298_T	0.501	0.49
130_K	350_P	0.501	0.49
14_E	22_F	0.501	0.49
402_P	411_W	0.501	0.49
51_I	428_Q	0.500	0.49
26_V	394_I	0.500	0.49
9_T	66_N	0.500	0.49
24_T	373_E	0.500	0.49
260_T	264_V	0.500	0.49

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qe7A	2	0.8588	100	0.652	Contact Map
3lt7A	3	0.0671	3.9	0.985	Contact Map
4f35D	2	0.5394	2.7	0.986	Contact Map
3pzfA	1	0.1157	2.5	0.986	Contact Map
3o7qA	1	0.4051	2.2	0.986	Contact Map
4ujpg	1	0.0764	2.1	0.987	Contact Map
3j45G	1	0.1366	2.1	0.987	Contact Map
3j01B	1	0.2662	1.9	0.987	Contact Map
4j2kA	2	0.1134	1.9	0.987	Contact Map
3s8kA	2	0.1389	1.8	0.987	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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