PEPVL - BACSU - GREMLIN Contacts

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PEPVL - Putative dipeptidase YtjP

UniProt:	O34944	Sequences: MNWEVEVIRKKEDLIRDTQEFLRINSVMDETTAGPGKPFGEGVNASLTSLLELGEKEGFTTKNLDGFAGHIEWGEGDDIIGVLCHVDVVPPGDGWTSDPFSAEIRNGRIYARGAIDDKGPTMAAFYALKIVKDMNLPLSKRVRMIIGTDEESDWRCVEHYFKHEEMPTMGFAPDADFPIINAEKGIIDASLLIPHRPNQAEPKAVLVSFQSGLRLNMVPDAAEAVIEGPKNEEILSSFKDMLRTTDQKGEAAIENGQLILRMYGLSCHAMEPNNGINAGILLCEFLQQTELDDAGKRFVQVVTDKFSGDTRGKKLDIDCEDEISGELTLNVGTLRYKEGQGGELGINIRYPVTAESKVIRDTFESASEFELGEFKDSKPHHVSADHPLVKTLQKVYEGQLGKKADLISIGGGTYARSLKAGVAFGPLFPGRPDSAHQKDEYIEIDDLLRSTALYAQAIYELAK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	463 (404)
Sequences:	5715 (4241)
Seq/√Len:	211.0

ECOLI - PEPD YGEY ALLC DAPE ARGE PEPT ABGA
BACSU - PEPVL FAPD ALLC YODQ YQJN ROCB PEPT YQJE YHAA
HALSA - Q9HS25
SULSO - Q97V97 Q97Y12 Q97VB6 Q97ZB7 LYSK CBPX2 CBPX1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
397_E	403_K	5.280	1.00
96_T	439_D	4.008	1.00
98_D	101_S	3.391	1.00
42_G	45_A	3.317	1.00
51_L	55_E	3.228	1.00
394_K	460_E	3.207	1.00
107_G	445_D	3.194	1.00
398_G	456_Q	3.136	1.00
52_E	56_K	2.916	1.00
194_P	341_G	2.907	1.00
101_S	112_R	2.811	1.00
398_G	460_E	2.746	1.00
22_L	111_A	2.740	1.00
414_Y	419_K	2.630	1.00
108_R	441_Y	2.615	1.00
182_A	408_S	2.561	1.00
48_T	52_E	2.515	1.00
20_E	49_S	2.492	1.00
361_D	365_S	2.473	1.00
54_G	71_I	2.369	1.00
81_G	167_P	2.347	1.00
358_V	362_T	2.291	1.00
72_E	143_R	2.258	1.00
192_L	341_G	2.253	1.00
44_N	48_T	2.248	1.00
230_K	233_E	2.210	1.00
97_S	105_R	2.177	1.00
52_E	55_E	2.158	1.00
19_Q	23_R	2.137	1.00
49_S	53_L	2.113	1.00
414_Y	418_L	2.038	1.00
20_E	23_R	2.020	1.00
74_G	141_R	2.000	1.00
74_G	77_D	1.984	1.00
50_L	86_V	1.973	1.00
21_F	46_S	1.959	1.00
103_E	112_R	1.923	1.00
104_I	444_I	1.908	1.00
192_L	370_E	1.881	1.00
442_I	447_L	1.873	1.00
23_R	101_S	1.873	1.00
227_E	366_A	1.849	1.00
25_N	42_G	1.830	1.00
78_D	168_T	1.805	1.00
192_L	372_G	1.805	1.00
79_I	141_R	1.800	1.00
244_T	358_V	1.800	1.00
394_K	398_G	1.775	1.00
456_Q	459_Y	1.755	1.00
218_V	322_E	1.737	1.00
138_L	459_Y	1.727	1.00
268_H	272_P	1.717	1.00
192_L	343_E	1.712	1.00
129_K	133_D	1.709	1.00
49_S	52_E	1.707	1.00
193_I	369_F	1.688	1.00
194_P	370_E	1.673	1.00
19_Q	102_A	1.673	1.00
60_T	72_E	1.673	1.00
104_I	107_G	1.630	1.00
62_K	164_E	1.629	1.00
59_F	71_I	1.619	1.00
51_L	69_G	1.604	1.00
190_S	372_G	1.579	1.00
392_L	457_A	1.576	1.00
423_A	426_P	1.576	1.00
385_D	390_K	1.572	1.00
393_Q	403_K	1.561	1.00
395_V	460_E	1.557	1.00
107_G	443_E	1.546	1.00
283_C	286_L	1.544	1.00
41_E	45_A	1.542	1.00
271_E	274_N	1.521	1.00
96_T	105_R	1.517	1.00
16_R	20_E	1.515	1.00
16_R	19_Q	1.509	1.00
269_A	272_P	1.508	1.00
94_G	97_S	1.508	1.00
254_E	257_Q	1.492	1.00
12_E	16_R	1.486	1.00
253_I	257_Q	1.476	1.00
399_Q	456_Q	1.475	1.00
190_S	343_E	1.472	1.00
393_Q	406_L	1.464	1.00
53_L	56_K	1.461	1.00
361_D	364_E	1.460	1.00
386_H	420_A	1.458	1.00
80_I	458_I	1.446	1.00
22_L	102_A	1.445	1.00
253_I	256_G	1.433	1.00
456_Q	460_E	1.430	1.00
169_M	388_L	1.423	1.00
51_L	61_T	1.412	1.00
48_T	51_L	1.399	1.00
86_V	146_I	1.387	1.00
26_S	46_S	1.385	1.00
222_A	225_V	1.379	1.00
270_M	274_N	1.374	1.00
51_L	63_N	1.366	1.00
208_S	225_V	1.361	1.00
390_K	393_Q	1.360	1.00
23_R	102_A	1.353	1.00
22_L	26_S	1.349	1.00
268_H	271_E	1.343	1.00
230_K	235_L	1.334	1.00
84_C	121_T	1.332	1.00
194_P	368_E	1.330	1.00
57_E	125_F	1.329	1.00
159_H	163_H	1.327	1.00
13_D	16_R	1.319	1.00
149_D	155_R	1.317	1.00
448_L	452_A	1.312	1.00
130_I	134_M	1.311	1.00
263_Y	266_S	1.306	1.00
394_K	397_E	1.302	1.00
189_A	363_F	1.299	1.00
65_D	161_F	1.298	1.00
249_G	252_A	1.278	1.00
111_A	114_A	1.272	1.00
283_C	287_Q	1.271	1.00
284_E	287_Q	1.268	1.00
357_K	361_D	1.265	1.00
57_E	132_K	1.262	1.00
24_I	49_S	1.260	1.00
395_V	399_Q	1.259	1.00
91_P	100_F	1.256	1.00
97_S	103_E	1.255	1.00
47_L	69_G	1.252	1.00
395_V	456_Q	1.252	1.00
246_D	353_T	1.237	1.00
288_Q	291_L	1.237	1.00
104_I	109_I	1.232	1.00
355_E	358_V	1.229	1.00
22_L	114_A	1.228	1.00
251_A	254_E	1.223	1.00
267_C	272_P	1.220	1.00
59_F	144_M	1.220	1.00
130_I	455_A	1.217	1.00
267_C	270_M	1.215	1.00
259_I	262_M	1.212	1.00
44_N	63_N	1.201	1.00
116_D	120_P	1.198	1.00
360_R	364_E	1.196	1.00
262_M	265_L	1.194	1.00
255_N	258_L	1.193	1.00
355_E	378_K	1.187	1.00
266_S	270_M	1.180	1.00
287_Q	290_E	1.180	1.00
282_L	285_F	1.178	1.00
258_L	264_G	1.177	1.00
258_L	261_R	1.175	1.00
47_L	63_N	1.173	1.00
265_L	268_H	1.162	1.00
239_K	366_A	1.158	1.00
252_A	255_N	1.158	1.00
218_V	320_E	1.157	1.00
128_L	144_M	1.154	1.00
116_D	125_F	1.151	1.00
20_E	53_L	1.146	1.00
248_K	253_I	1.145	1.00
116_D	119_G	1.142	1.00
46_S	86_V	1.141	1.00
253_I	258_L	1.140	1.00
105_R	110_Y	1.140	1.00
392_L	422_V	1.139	1.00
70_H	143_R	1.138	1.00
250_E	253_I	1.138	1.00
171_F	424_F	1.137	1.00
116_D	121_T	1.132	1.00
445_D	449_R	1.128	1.00
24_I	46_S	1.127	1.00
225_V	317_I	1.126	1.00
399_Q	452_A	1.125	1.00
59_F	73_W	1.121	1.00
17_D	126_Y	1.121	1.00
360_R	373_E	1.118	1.00
356_S	378_K	1.118	1.00
262_M	266_S	1.116	1.00
221_A	342_G	1.099	1.00
393_Q	397_E	1.098	1.00
260_L	263_Y	1.096	1.00
420_A	423_A	1.091	1.00
241_M	245_T	1.086	1.00
235_L	239_K	1.075	1.00
285_F	290_E	1.073	1.00
356_S	376_D	1.065	1.00
57_E	129_K	1.062	1.00
19_Q	104_I	1.061	1.00
47_L	86_V	1.060	1.00
187_I	360_R	1.058	1.00
267_C	271_E	1.057	1.00
284_E	288_Q	1.057	1.00
421_G	426_P	1.052	1.00
54_G	125_F	1.047	1.00
15_I	19_Q	1.043	1.00
53_L	57_E	1.041	1.00
285_F	288_Q	1.039	1.00
358_V	361_D	1.038	1.00
410_G	413_T	1.035	1.00
248_K	251_A	1.032	1.00
86_V	148_T	1.028	1.00
190_S	345_G	1.026	1.00
62_K	65_D	1.021	1.00
14_L	451_T	1.020	1.00
72_E	141_R	1.019	1.00
321_D	343_E	1.015	1.00
416_R	419_K	1.013	1.00
126_Y	129_K	1.012	1.00
283_C	290_E	1.010	1.00
263_Y	267_C	1.007	1.00
420_A	426_P	1.005	1.00
282_L	290_E	1.005	1.00
432_P	435_A	1.005	1.00
175_A	180_I	1.003	1.00
414_Y	417_S	1.003	1.00
399_Q	453_L	0.998	1.00
180_I	407_I	0.995	1.00
324_S	330_N	0.993	1.00
431_R	443_E	0.991	1.00
180_I	409_I	0.988	1.00
265_L	270_M	0.987	1.00
239_K	243_R	0.986	1.00
282_L	286_L	0.985	1.00
391_T	395_V	0.979	1.00
258_L	265_L	0.979	1.00
258_L	262_M	0.979	1.00
27_V	100_F	0.977	1.00
19_Q	101_S	0.972	1.00
99_P	102_A	0.972	1.00
190_S	374_F	0.971	1.00
29_D	149_D	0.971	1.00
73_W	128_L	0.971	1.00
287_Q	291_L	0.967	1.00
103_E	110_Y	0.955	1.00
48_T	63_N	0.951	1.00
17_D	57_E	0.950	1.00
117_D	120_P	0.950	1.00
267_C	273_N	0.949	1.00
421_G	424_F	0.949	1.00
151_E	436_H	0.948	0.99
149_D	156_C	0.948	0.99
239_K	242_L	0.947	0.99
93_D	113_G	0.944	0.99
264_G	268_H	0.943	0.99
397_E	402_K	0.943	0.99
236_S	239_K	0.942	0.99
45_A	48_T	0.941	0.99
73_W	132_K	0.938	0.99
268_H	273_N	0.935	0.99
252_A	257_Q	0.935	0.99
79_I	143_R	0.933	0.99
266_S	272_P	0.933	0.99
152_S	155_R	0.928	0.99
320_E	326_E	0.924	0.99
257_Q	260_L	0.923	0.99
286_L	290_E	0.923	0.99
181_N	384_A	0.921	0.99
117_D	121_T	0.921	0.99
254_E	259_I	0.919	0.99
106_N	445_D	0.916	0.99
390_K	394_K	0.915	0.99
16_R	23_R	0.914	0.99
17_D	53_L	0.914	0.99
315_L	348_I	0.913	0.99
66_G	148_T	0.909	0.99
64_L	70_H	0.907	0.99
15_I	104_I	0.907	0.99
269_A	273_N	0.904	0.99
249_G	253_I	0.904	0.99
191_L	346_I	0.903	0.99
324_S	408_S	0.902	0.99
261_R	264_G	0.898	0.99
444_I	448_L	0.897	0.99
119_G	125_F	0.896	0.99
250_E	254_E	0.892	0.99
431_R	446_D	0.890	0.99
397_E	404_A	0.890	0.99
170_G	421_G	0.884	0.99
15_I	444_I	0.882	0.99
54_G	59_F	0.881	0.99
264_G	272_P	0.878	0.99
285_F	289_T	0.874	0.99
212_G	219_P	0.872	0.99
14_L	122_M	0.868	0.99
393_Q	404_A	0.867	0.99
29_D	152_S	0.864	0.99
269_A	274_N	0.859	0.99
106_N	110_Y	0.859	0.99
354_A	359_I	0.858	0.99
391_T	460_E	0.854	0.99
195_H	217_M	0.854	0.99
252_A	256_G	0.854	0.99
240_D	243_R	0.852	0.99
443_E	446_D	0.849	0.99
415_A	419_K	0.848	0.99
189_A	371_L	0.847	0.99
150_E	436_H	0.845	0.99
121_T	125_F	0.844	0.99
191_L	371_L	0.842	0.99
313_K	318_D	0.840	0.99
268_H	274_N	0.836	0.99
409_I	412_G	0.833	0.99
159_H	162_K	0.825	0.99
248_K	252_A	0.824	0.99
138_L	142_V	0.823	0.99
250_E	257_Q	0.822	0.99
255_N	259_I	0.820	0.99
396_Y	453_L	0.820	0.99
364_E	373_E	0.819	0.99
420_A	424_F	0.818	0.99
362_T	366_A	0.817	0.99
85_H	116_D	0.815	0.98
183_E	413_T	0.813	0.98
21_F	50_L	0.812	0.98
116_D	123_A	0.810	0.98
28_M	152_S	0.810	0.98
265_L	269_A	0.809	0.98
348_I	363_F	0.808	0.98
223_E	231_N	0.805	0.98
179_I	404_A	0.804	0.98
27_V	30_E	0.804	0.98
318_D	321_D	0.802	0.98
79_I	165_E	0.802	0.98
283_C	291_L	0.802	0.98
70_H	164_E	0.800	0.98
71_I	144_M	0.797	0.98
75_E	137_P	0.795	0.98
457_A	461_L	0.795	0.98
314_K	317_I	0.794	0.98
127_A	144_M	0.792	0.98
14_L	447_L	0.790	0.98
286_L	291_L	0.789	0.98
236_S	240_D	0.787	0.98
116_D	122_M	0.785	0.98
24_I	45_A	0.785	0.98
102_A	109_I	0.782	0.98
432_P	441_Y	0.772	0.98
189_A	373_E	0.771	0.98
19_Q	109_I	0.770	0.98
409_I	413_T	0.770	0.98
215_L	220_D	0.770	0.98
54_G	61_T	0.769	0.98
27_V	91_P	0.767	0.98
156_C	159_H	0.766	0.98
252_A	258_L	0.766	0.98
282_L	287_Q	0.759	0.98
281_L	284_E	0.756	0.98
258_L	263_Y	0.755	0.98
364_E	371_L	0.755	0.98
25_N	100_F	0.754	0.97
206_L	226_I	0.754	0.97
17_D	129_K	0.753	0.97
237_S	240_D	0.753	0.97
446_D	449_R	0.752	0.97
368_E	371_L	0.747	0.97
254_E	258_L	0.747	0.97
257_Q	264_G	0.747	0.97
115_I	119_G	0.747	0.97
259_I	265_L	0.744	0.97
61_T	72_E	0.744	0.97
128_L	142_V	0.743	0.97
179_I	393_Q	0.742	0.97
48_T	55_E	0.741	0.97
21_F	49_S	0.740	0.97
260_L	265_L	0.740	0.97
17_D	49_S	0.738	0.97
222_A	226_I	0.737	0.97
17_D	20_E	0.736	0.97
283_C	288_Q	0.736	0.97
362_T	365_S	0.735	0.97
122_M	125_F	0.732	0.97
415_A	418_L	0.731	0.97
115_I	122_M	0.728	0.97
117_D	125_F	0.728	0.97
218_V	222_A	0.725	0.97
191_L	369_F	0.724	0.97
179_I	392_L	0.722	0.97
348_I	359_I	0.721	0.97
263_Y	272_P	0.721	0.97
118_K	123_A	0.718	0.97
267_C	274_N	0.713	0.96
261_R	265_L	0.711	0.96
188_D	347_N	0.711	0.96
262_M	270_M	0.708	0.96
79_I	168_T	0.707	0.96
84_C	120_P	0.706	0.96
128_L	132_K	0.702	0.96
186_I	377_S	0.701	0.96
433_D	441_Y	0.701	0.96
396_Y	400_L	0.700	0.96
198_N	205_V	0.700	0.96
426_P	429_P	0.698	0.96
387_P	391_T	0.697	0.96
373_E	376_D	0.696	0.96
115_I	120_P	0.695	0.96
102_A	111_A	0.695	0.96
18_T	22_L	0.695	0.96
283_C	289_T	0.694	0.96
259_I	263_Y	0.694	0.96
357_K	360_R	0.693	0.96
206_L	221_A	0.693	0.96
122_M	126_Y	0.692	0.96
119_G	122_M	0.692	0.96
282_L	288_Q	0.690	0.96
176_D	402_K	0.690	0.96
115_I	118_K	0.689	0.96
158_E	162_K	0.688	0.96
321_D	325_G	0.688	0.96
325_G	330_N	0.687	0.96
260_L	269_A	0.686	0.96
256_G	259_I	0.685	0.96
50_L	146_I	0.684	0.96
82_V	458_I	0.683	0.96
316_D	319_C	0.683	0.96
108_R	443_E	0.682	0.95
116_D	130_I	0.676	0.95
118_K	122_M	0.673	0.95
186_I	412_G	0.669	0.95
13_D	132_K	0.665	0.95
50_L	121_T	0.661	0.95
221_A	344_L	0.661	0.95
260_L	270_M	0.660	0.95
331_V	344_L	0.659	0.95
391_T	461_L	0.659	0.95
234_I	237_S	0.659	0.95
116_D	150_E	0.659	0.95
391_T	394_K	0.658	0.95
265_L	272_P	0.658	0.95
141_R	165_E	0.656	0.94
389_V	422_V	0.655	0.94
251_A	258_L	0.654	0.94
350_Y	376_D	0.654	0.94
61_T	65_D	0.652	0.94
72_E	166_M	0.652	0.94
247_Q	250_E	0.651	0.94
98_D	103_E	0.650	0.94
117_D	123_A	0.649	0.94
118_K	121_T	0.648	0.94
354_A	358_V	0.647	0.94
206_L	211_S	0.647	0.94
28_M	155_R	0.645	0.94
62_K	70_H	0.644	0.94
448_L	451_T	0.644	0.94
47_L	51_L	0.643	0.94
262_M	267_C	0.643	0.94
88_V	100_F	0.643	0.94
26_S	118_K	0.642	0.94
68_A	160_Y	0.641	0.94
408_S	413_T	0.641	0.94
260_L	264_G	0.640	0.94
158_E	417_S	0.639	0.94
264_G	270_M	0.639	0.94
80_I	169_M	0.638	0.94
120_P	124_A	0.638	0.94
97_S	102_A	0.637	0.94
204_A	340_Q	0.635	0.93
395_V	453_L	0.635	0.93
95_W	98_D	0.635	0.93
27_V	88_V	0.634	0.93
108_R	433_D	0.632	0.93
222_A	317_I	0.630	0.93
266_S	269_A	0.628	0.93
110_Y	441_Y	0.627	0.93
50_L	71_I	0.627	0.93
19_Q	22_L	0.626	0.93
131_V	459_Y	0.622	0.93
451_T	455_A	0.620	0.93
211_S	219_P	0.620	0.93
116_D	436_H	0.620	0.93
281_L	285_F	0.620	0.93
124_A	173_P	0.619	0.93
66_G	159_H	0.619	0.93
261_R	266_S	0.619	0.93
91_P	438_K	0.618	0.92
219_P	229_P	0.615	0.92
13_D	129_K	0.613	0.92
245_T	248_K	0.613	0.92
186_I	350_Y	0.613	0.92
70_H	160_Y	0.611	0.92
123_A	454_Y	0.609	0.92
255_N	260_L	0.609	0.92
82_V	144_M	0.609	0.92
84_C	146_I	0.609	0.92
50_L	84_C	0.608	0.92
50_L	125_F	0.608	0.92
383_S	420_A	0.608	0.92
116_D	127_A	0.607	0.92
252_A	264_G	0.605	0.92
25_N	91_P	0.604	0.92
118_K	125_F	0.604	0.92
449_R	452_A	0.602	0.91
13_D	17_D	0.602	0.91
175_A	423_A	0.600	0.91
134_M	137_P	0.600	0.91
116_D	151_E	0.598	0.91
109_I	444_I	0.597	0.91
116_D	124_A	0.596	0.91
171_F	457_A	0.595	0.91
140_K	458_I	0.595	0.91
286_L	289_T	0.592	0.91
85_H	150_E	0.592	0.91
285_F	291_L	0.592	0.91
310_T	313_K	0.592	0.91
424_F	457_A	0.590	0.91
119_G	123_A	0.589	0.91
28_M	149_D	0.589	0.91
188_D	215_L	0.588	0.91
234_I	242_L	0.587	0.90
81_G	145_I	0.586	0.90
282_L	291_L	0.586	0.90
131_V	139_S	0.585	0.90
251_A	260_L	0.585	0.90
55_E	61_T	0.584	0.90
115_I	121_T	0.583	0.90
177_F	450_S	0.581	0.90
253_I	264_G	0.580	0.90
174_D	212_G	0.580	0.90
97_S	101_S	0.579	0.90
415_A	423_A	0.579	0.90
188_D	374_F	0.578	0.90
20_E	52_E	0.577	0.90
395_V	398_G	0.576	0.90
73_W	139_S	0.576	0.90
264_G	267_C	0.575	0.90
261_R	268_H	0.574	0.89
160_Y	164_E	0.574	0.89
262_M	268_H	0.570	0.89
261_R	267_C	0.569	0.89
327_L	332_G	0.568	0.89
122_M	130_I	0.566	0.89
251_A	255_N	0.566	0.89
127_A	131_V	0.565	0.89
178_P	407_I	0.565	0.89
244_T	353_T	0.564	0.89
181_N	408_S	0.564	0.89
205_V	211_S	0.564	0.89
64_L	68_A	0.564	0.89
54_G	144_M	0.563	0.89
179_I	453_L	0.561	0.88
326_E	355_E	0.559	0.88
211_S	221_A	0.559	0.88
403_K	406_L	0.558	0.88
219_P	222_A	0.558	0.88
78_D	387_P	0.557	0.88
253_I	259_I	0.556	0.88
238_F	242_L	0.555	0.88
256_G	261_R	0.555	0.88
257_Q	262_M	0.555	0.88
121_T	146_I	0.554	0.88
246_D	250_E	0.554	0.88
208_S	223_E	0.550	0.87
207_V	225_V	0.545	0.87
251_A	261_R	0.544	0.87
368_E	375_K	0.543	0.87
20_E	56_K	0.543	0.87
43_V	148_T	0.542	0.87
259_I	266_S	0.542	0.87
263_Y	268_H	0.540	0.86
367_S	371_L	0.539	0.86
17_D	122_M	0.539	0.86
242_L	245_T	0.538	0.86
206_L	219_P	0.537	0.86
117_D	122_M	0.536	0.86
209_F	409_I	0.536	0.86
189_A	360_R	0.534	0.86
445_D	448_L	0.534	0.86
246_D	249_G	0.532	0.86
426_P	430_G	0.531	0.86
332_G	347_N	0.529	0.85
115_I	429_P	0.528	0.85
309_D	314_K	0.528	0.85
270_M	273_N	0.525	0.85
384_A	387_P	0.524	0.85
247_Q	251_A	0.524	0.85
261_R	269_A	0.523	0.85
260_L	268_H	0.522	0.85
256_G	260_L	0.519	0.84
430_G	441_Y	0.519	0.84
71_I	146_I	0.519	0.84
56_K	129_K	0.518	0.84
80_I	140_K	0.517	0.84
325_G	328_T	0.517	0.84
357_K	376_D	0.516	0.84
120_P	125_F	0.516	0.84
281_L	287_Q	0.513	0.84
119_G	130_I	0.512	0.83
240_D	244_T	0.512	0.83
216_N	316_D	0.512	0.83
15_I	109_I	0.511	0.83
207_V	227_E	0.511	0.83
114_A	442_I	0.511	0.83
313_K	317_I	0.510	0.83
257_Q	265_L	0.510	0.83
327_L	330_N	0.510	0.83
259_I	264_G	0.509	0.83
83_L	147_G	0.509	0.83
130_I	133_D	0.507	0.83
120_P	123_A	0.507	0.83
78_D	140_K	0.506	0.83
21_F	122_M	0.506	0.83
179_I	406_L	0.505	0.83
153_D	183_E	0.504	0.82
197_P	340_Q	0.504	0.82
85_H	151_E	0.503	0.82
17_D	132_K	0.500	0.82
221_A	225_V	0.500	0.82

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1lfwA	1	0.9957	100	0.329	Contact Map
3khxA	1	0.9136	100	0.329	Contact Map
2zogA	2	0.9071	100	0.41	Contact Map
3dljA	2	0.9114	100	0.412	Contact Map
4g1pA	2	0.9114	100	0.415	Contact Map
3pfeA	2	0.905	100	0.421	Contact Map
4mmoA	2	0.8747	100	0.422	Contact Map
2pokA	2	0.905	100	0.427	Contact Map
3pfoA	2	0.797	100	0.431	Contact Map
2qyvA	2	0.8942	100	0.433	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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