YODT - BACSU - GREMLIN Contacts

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YODT - Uncharacterized aminotransferase YodT

UniProt:	O34662	Sequences: MSSYLIKPELSSAYPVVSYAKGSYVYDQTGKKYLDGSSGAVTCNIGHGVRDVTEKLKEQLDQVSFAYRSQFTSEPAEQLAALLAQELPGDVNWSFFVNSGSEAIETAMKIAIQYWQEKKQTQKSIFLSRWSSYHGITLGALSLSGFYERRYRFTHLIERYPAISAPHIYRLNHETEEDFVQTAADELDTMIKRIGSQFIAGFVAEPIIGAAGAAITPPPGYYERLSEVCRTHDVLFIADEVMTGLGRTGRMLATEHWDTVPDIAVLGKGLGAGYAPIAAAVVSDSIIETIKQGSGVIMSGHTYSAHPYSAKAALEVLRYVLKHGLIKQSEKKGAVLKKKLDEAASQSGIIGEVRGKGLLLGIEFVADQKTKKVFPPEQAITQLIVSEAKKRGLIVYPSKAGIDSGEGDAVIIAPPFTISDGEMEELISIFSETVAAVEKNLKKD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	444 (380)
Sequences:	20888 (12348)
Seq/√Len:	633.4

ECOLI - PAT ASTC BIOA PUUE ARGD GABT GSA
BACSU - YODT BIOK YHXA GABT ARGD OAT GSAB GSA
HALSA - Q9HHV4 GSA Q9HPQ4
SULSO - Q97VB5 Q97VA7 ARGD Q97U15 GSA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
57_K	61_D	4.360	1.00
226_S	230_R	3.884	1.00
391_R	432_E	3.733	1.00
24_Y	32_K	3.503	1.00
335_V	424_E	3.171	1.00
184_A	224_R	3.061	1.00
19_Y	26_Y	3.028	1.00
82_L	318_R	2.974	1.00
335_V	420_D	2.829	1.00
250_R	256_H	2.816	1.00
324_G	327_K	2.704	1.00
328_Q	332_K	2.684	1.00
419_S	422_E	2.613	1.00
51_D	322_K	2.562	1.00
346_Q	431_S	2.491	1.00
54_E	58_E	2.463	1.00
36_G	426_L	2.409	1.00
82_L	321_L	2.367	1.00
315_E	318_R	2.341	1.00
51_D	319_Y	2.330	1.00
24_Y	422_E	2.277	1.00
224_R	227_E	2.266	1.00
387_E	436_A	2.245	1.00
339_K	427_I	2.211	1.00
391_R	436_A	2.202	1.00
18_S	28_Q	2.197	1.00
227_E	231_T	2.188	1.00
49_V	319_Y	2.151	1.00
26_Y	32_K	2.116	1.00
51_D	315_E	2.077	1.00
387_E	390_K	2.072	1.00
82_L	314_L	2.072	1.00
339_K	424_E	2.071	1.00
331_K	420_D	2.058	1.00
188_D	231_T	2.009	1.00
125_I	198_F	1.979	1.00
164_S	186_E	1.957	1.00
425_E	429_I	1.942	1.00
79_L	313_A	1.941	1.00
53_T	57_K	1.933	1.00
337_K	341_D	1.896	1.00
347_S	431_S	1.845	1.00
27_D	31_K	1.826	1.00
387_E	391_R	1.822	1.00
93_W	284_D	1.820	1.00
92_N	284_D	1.812	1.00
31_K	392_G	1.806	1.00
334_A	338_K	1.801	1.00
393_L	429_I	1.796	1.00
351_G	365_V	1.770	1.00
284_D	288_E	1.763	1.00
319_Y	323_H	1.754	1.00
125_I	161_P	1.743	1.00
337_K	355_G	1.732	1.00
24_Y	425_E	1.730	1.00
18_S	62_Q	1.730	1.00
339_K	342_E	1.719	1.00
74_E	78_Q	1.717	1.00
203_V	237_I	1.700	1.00
97_V	278_A	1.686	1.00
347_S	435_A	1.659	1.00
81_A	85_Q	1.625	1.00
187_L	225_L	1.624	1.00
188_D	192_K	1.615	1.00
130_W	164_S	1.599	1.00
104_I	265_V	1.595	1.00
78_Q	314_L	1.594	1.00
337_K	360_L	1.582	1.00
56_L	60_L	1.581	1.00
86_E	321_L	1.571	1.00
56_L	312_A	1.570	1.00
250_R	330_E	1.567	1.00
82_L	85_Q	1.563	1.00
387_E	433_T	1.548	1.00
21_K	50_R	1.542	1.00
204_A	225_L	1.517	1.00
23_S	422_E	1.515	1.00
332_K	335_V	1.504	1.00
271_G	277_I	1.499	1.00
185_D	189_T	1.488	1.00
191_I	234_V	1.481	1.00
202_F	229_C	1.481	1.00
431_S	435_A	1.480	1.00
58_E	62_Q	1.475	1.00
266_L	279_A	1.474	1.00
238_A	254_T	1.473	1.00
220_G	223_E	1.455	1.00
343_A	431_S	1.450	1.00
332_K	423_M	1.450	1.00
127_L	199_I	1.433	1.00
106_T	280_A	1.426	1.00
114_Y	286_I	1.423	1.00
32_K	425_E	1.419	1.00
275_A	309_S	1.417	1.00
188_D	224_R	1.415	1.00
266_L	281_V	1.412	1.00
23_S	417_T	1.405	1.00
226_S	229_C	1.399	1.00
189_T	193_R	1.398	1.00
50_R	54_E	1.386	1.00
126_F	201_G	1.383	1.00
328_Q	331_K	1.380	1.00
166_P	218_P	1.380	1.00
87_L	281_V	1.378	1.00
192_K	232_H	1.378	1.00
84_A	94_S	1.373	1.00
226_S	236_F	1.372	1.00
128_S	162_A	1.357	1.00
80_A	96_F	1.356	1.00
251_M	255_E	1.356	1.00
114_Y	289_T	1.354	1.00
94_S	281_V	1.354	1.00
314_L	318_R	1.350	1.00
388_A	395_V	1.348	1.00
332_K	420_D	1.344	1.00
256_H	356_K	1.329	1.00
108_M	126_F	1.326	1.00
315_E	319_Y	1.321	1.00
391_R	433_T	1.318	1.00
54_E	57_K	1.315	1.00
129_R	221_Y	1.310	1.00
250_R	255_E	1.305	1.00
341_D	344_A	1.296	1.00
335_V	339_K	1.290	1.00
339_K	428_S	1.287	1.00
327_K	331_K	1.281	1.00
204_A	222_Y	1.279	1.00
277_I	310_A	1.278	1.00
21_K	48_G	1.271	1.00
343_A	427_I	1.267	1.00
27_D	33_Y	1.264	1.00
85_Q	321_L	1.263	1.00
107_A	265_V	1.251	1.00
339_K	431_S	1.250	1.00
254_T	264_A	1.248	1.00
111_A	237_I	1.242	1.00
202_F	225_L	1.240	1.00
260_V	283_S	1.235	1.00
55_K	315_E	1.234	1.00
104_I	203_V	1.234	1.00
418_I	423_M	1.231	1.00
48_G	53_T	1.222	1.00
263_I	282_V	1.221	1.00
93_W	288_E	1.219	1.00
19_Y	62_Q	1.216	1.00
185_D	188_D	1.216	1.00
53_T	61_D	1.213	1.00
422_E	425_E	1.212	1.00
45_I	319_Y	1.211	1.00
257_W	356_K	1.205	1.00
188_D	228_V	1.204	1.00
49_V	323_H	1.196	1.00
17_V	25_V	1.196	1.00
78_Q	318_R	1.195	1.00
53_T	60_L	1.190	1.00
223_E	227_E	1.189	1.00
270_L	277_I	1.188	1.00
330_E	334_A	1.187	1.00
318_R	322_K	1.185	1.00
277_I	313_A	1.178	1.00
220_G	257_W	1.158	1.00
184_A	228_V	1.130	1.00
428_S	432_E	1.127	1.00
143_L	160_Y	1.127	1.00
56_L	308_Y	1.126	1.00
235_L	286_I	1.125	1.00
97_V	280_A	1.125	1.00
57_K	60_L	1.119	1.00
341_D	345_S	1.117	1.00
246_G	326_I	1.114	1.00
223_E	258_D	1.114	1.00
96_F	310_A	1.110	1.00
163_I	190_M	1.107	1.00
252_L	266_L	1.104	1.00
391_R	429_I	1.092	1.00
16_V	28_Q	1.089	1.00
319_Y	322_K	1.083	1.00
388_A	433_T	1.083	1.00
90_D	260_V	1.080	1.00
270_L	279_A	1.080	1.00
238_A	259_T	1.071	1.00
143_L	203_V	1.071	1.00
425_E	428_S	1.064	1.00
393_L	426_L	1.063	1.00
23_S	34_L	1.060	1.00
263_I	280_A	1.058	1.00
388_A	429_I	1.057	1.00
24_Y	34_L	1.053	1.00
186_E	189_T	1.047	1.00
18_S	74_E	1.046	1.00
18_S	26_Y	1.036	1.00
420_D	424_E	1.034	1.00
103_A	265_V	1.031	1.00
51_D	318_R	1.025	1.00
91_V	281_V	1.025	1.00
338_K	342_E	1.019	1.00
424_E	428_S	1.011	1.00
229_C	234_V	1.007	1.00
21_K	32_K	0.999	1.00
123_K	233_D	0.996	1.00
124_S	198_F	0.990	1.00
101_S	140_A	0.988	1.00
86_E	251_M	0.985	1.00
21_K	26_Y	0.984	1.00
82_L	86_E	0.984	1.00
18_S	30_G	0.980	1.00
388_A	393_L	0.979	1.00
79_L	314_L	0.979	1.00
219_P	223_E	0.976	1.00
188_D	227_E	0.974	1.00
272_A	316_V	0.974	1.00
110_I	280_A	0.973	1.00
201_G	237_I	0.968	1.00
227_E	230_R	0.959	1.00
54_E	61_D	0.958	1.00
249_G	255_E	0.957	1.00
383_L	387_E	0.955	1.00
351_G	363_E	0.953	1.00
344_A	350_I	0.951	1.00
386_S	390_K	0.950	1.00
125_I	194_I	0.950	1.00
188_D	232_H	0.946	1.00
327_K	330_E	0.943	1.00
206_P	238_A	0.943	1.00
58_E	311_K	0.943	1.00
363_E	408_D	0.942	1.00
245_L	320_V	0.934	1.00
34_L	422_E	0.932	1.00
326_I	329_S	0.930	1.00
16_V	77_E	0.929	1.00
216_T	356_K	0.925	1.00
220_G	224_R	0.925	1.00
51_D	54_E	0.923	1.00
108_M	143_L	0.923	1.00
333_G	337_K	0.919	1.00
45_I	316_V	0.917	1.00
222_Y	257_W	0.916	1.00
107_A	237_I	0.907	1.00
110_I	282_V	0.906	1.00
342_E	346_Q	0.906	1.00
128_S	203_V	0.903	1.00
207_I	356_K	0.899	1.00
45_I	52_V	0.895	1.00
44_N	269_G	0.892	1.00
421_G	424_E	0.892	1.00
34_L	425_E	0.890	1.00
225_L	236_F	0.888	1.00
328_Q	420_D	0.873	1.00
311_K	315_E	0.872	1.00
114_Y	235_L	0.872	1.00
129_R	217_P	0.870	1.00
86_E	317_L	0.869	1.00
338_K	341_D	0.869	1.00
256_H	330_E	0.867	1.00
190_M	193_R	0.864	1.00
361_G	409_A	0.861	1.00
142_S	157_I	0.860	1.00
320_V	325_L	0.860	1.00
52_V	312_A	0.854	1.00
124_S	159_R	0.851	1.00
320_V	326_I	0.848	1.00
28_Q	74_E	0.847	1.00
111_A	201_G	0.846	1.00
164_S	167_H	0.845	1.00
228_V	232_H	0.843	1.00
36_G	418_I	0.839	1.00
58_E	61_D	0.836	1.00
75_P	311_K	0.835	1.00
191_I	199_I	0.834	1.00
251_M	326_I	0.830	1.00
43_C	272_A	0.828	1.00
165_A	217_P	0.828	1.00
101_S	137_T	0.827	1.00
23_S	419_S	0.824	1.00
230_R	260_V	0.819	1.00
129_R	165_A	0.815	1.00
325_L	329_S	0.813	1.00
342_E	431_S	0.813	1.00
326_I	330_E	0.811	1.00
125_I	199_I	0.811	1.00
418_I	426_L	0.810	1.00
352_E	363_E	0.808	1.00
75_P	314_L	0.808	1.00
243_T	359_L	0.803	1.00
51_D	55_K	0.800	1.00
83_L	281_V	0.800	1.00
78_Q	82_L	0.797	1.00
122_Q	198_F	0.795	1.00
161_P	190_M	0.794	1.00
432_E	436_A	0.794	1.00
111_A	235_L	0.794	1.00
346_Q	435_A	0.793	1.00
89_G	264_A	0.793	1.00
88_P	254_T	0.788	1.00
34_L	426_L	0.788	1.00
412_I	430_F	0.786	1.00
382_Q	386_S	0.786	1.00
335_V	338_K	0.779	1.00
195_G	232_H	0.777	1.00
358_L	418_I	0.775	1.00
229_C	236_F	0.773	1.00
359_L	413_A	0.772	1.00
331_K	335_V	0.772	1.00
125_I	192_K	0.772	1.00
75_P	78_Q	0.769	1.00
353_V	360_L	0.767	1.00
113_Q	294_S	0.762	1.00
224_R	228_V	0.760	1.00
84_A	91_V	0.758	1.00
285_S	288_E	0.756	1.00
206_P	222_Y	0.754	1.00
342_E	345_S	0.754	1.00
97_V	103_A	0.753	1.00
254_T	259_T	0.752	1.00
183_A	186_E	0.752	1.00
385_V	397_P	0.751	1.00
139_G	157_I	0.751	1.00
252_L	264_A	0.750	1.00
245_L	317_L	0.749	1.00
202_F	234_V	0.745	1.00
245_L	266_L	0.743	1.00
339_K	423_M	0.743	1.00
354_R	363_E	0.742	1.00
22_G	417_T	0.740	1.00
79_L	310_A	0.738	1.00
186_E	190_M	0.738	1.00
275_A	308_Y	0.731	1.00
355_G	360_L	0.729	1.00
41_V	413_A	0.729	1.00
107_A	263_I	0.728	1.00
199_I	234_V	0.728	1.00
291_K	294_S	0.728	1.00
384_I	430_F	0.728	1.00
94_S	279_A	0.727	1.00
332_K	358_L	0.721	1.00
72_T	77_E	0.718	1.00
251_M	321_L	0.718	1.00
226_S	259_T	0.717	1.00
75_P	310_A	0.716	1.00
194_I	198_F	0.715	1.00
190_M	194_I	0.715	1.00
331_K	334_A	0.715	1.00
108_M	203_V	0.710	1.00
204_A	236_F	0.709	1.00
111_A	263_I	0.709	1.00
189_T	192_K	0.706	1.00
191_I	228_V	0.706	1.00
223_E	257_W	0.705	1.00
233_D	285_S	0.703	1.00
163_I	166_P	0.703	1.00
110_I	290_I	0.702	1.00
23_S	415_P	0.702	1.00
301_H	304_S	0.700	1.00
283_S	286_I	0.699	1.00
383_L	386_S	0.697	1.00
34_L	393_L	0.696	1.00
248_T	256_H	0.694	1.00
246_G	320_V	0.691	1.00
187_L	202_F	0.690	1.00
55_K	312_A	0.686	1.00
73_S	76_A	0.684	1.00
245_L	251_M	0.683	1.00
343_A	347_S	0.680	1.00
36_G	393_L	0.678	1.00
384_I	433_T	0.676	1.00
62_Q	74_E	0.676	1.00
421_G	425_E	0.673	1.00
254_T	261_P	0.673	1.00
62_Q	75_P	0.666	1.00
163_I	187_L	0.666	1.00
364_F	384_I	0.666	1.00
91_V	264_A	0.665	1.00
104_I	140_A	0.664	1.00
216_T	355_G	0.663	1.00
364_F	434_V	0.663	1.00
76_A	80_A	0.663	1.00
384_I	388_A	0.663	1.00
329_S	333_G	0.663	1.00
59_Q	62_Q	0.661	1.00
245_L	270_L	0.661	1.00
335_V	423_M	0.658	1.00
388_A	430_F	0.658	1.00
347_S	434_V	0.657	1.00
77_E	81_A	0.657	1.00
16_V	72_T	0.657	1.00
363_E	409_A	0.656	1.00
418_I	422_E	0.656	1.00
209_G	242_M	0.655	1.00
236_F	259_T	0.653	1.00
334_A	337_K	0.651	1.00
328_Q	419_S	0.649	1.00
23_S	418_I	0.648	1.00
52_V	272_A	0.648	1.00
228_V	231_T	0.647	1.00
333_G	355_G	0.646	1.00
219_P	257_W	0.645	1.00
31_K	390_K	0.644	1.00
266_L	270_L	0.643	1.00
59_Q	75_P	0.642	1.00
86_E	252_L	0.642	1.00
37_S	396_Y	0.641	1.00
365_V	368_Q	0.640	1.00
349_I	365_V	0.640	1.00
75_P	79_L	0.638	1.00
98_N	102_E	0.638	1.00
99_S	102_E	0.636	1.00
426_L	429_I	0.634	1.00
90_D	283_S	0.634	1.00
222_Y	238_A	0.633	1.00
82_L	317_L	0.632	1.00
219_P	356_K	0.631	1.00
217_P	220_G	0.629	1.00
209_G	359_L	0.629	1.00
207_I	248_T	0.628	1.00
339_K	343_A	0.628	1.00
163_I	167_H	0.624	1.00
100_G	241_V	0.624	1.00
17_V	20_A	0.623	1.00
50_R	61_D	0.622	1.00
241_V	265_V	0.621	1.00
191_I	232_H	0.621	1.00
114_Y	285_S	0.621	1.00
282_V	287_I	0.620	1.00
286_I	289_T	0.619	1.00
110_I	263_I	0.619	1.00
130_W	162_A	0.618	1.00
60_L	308_Y	0.615	1.00
237_I	263_I	0.615	1.00
230_R	236_F	0.614	1.00
184_A	188_D	0.612	1.00
38_S	413_A	0.611	1.00
125_I	159_R	0.610	1.00
87_L	252_L	0.610	1.00
433_T	436_A	0.609	1.00
79_L	96_F	0.609	1.00
55_K	58_E	0.608	1.00
427_I	431_S	0.608	1.00
208_I	359_L	0.607	1.00
412_I	426_L	0.607	1.00
86_E	250_R	0.606	1.00
288_E	292_Q	0.604	1.00
55_K	318_R	0.603	1.00
384_I	410_V	0.602	1.00
84_A	92_N	0.601	1.00
45_I	325_L	0.601	1.00
32_K	429_I	0.600	1.00
267_G	278_A	0.600	1.00
25_V	394_I	0.599	1.00
429_I	433_T	0.599	1.00
87_L	264_A	0.599	1.00
20_A	63_V	0.598	1.00
88_P	255_E	0.595	1.00
386_S	389_K	0.594	1.00
353_V	362_I	0.594	1.00
393_L	425_E	0.593	1.00
38_S	415_P	0.592	1.00
89_G	92_N	0.592	1.00
48_G	60_L	0.592	1.00
112_I	155_H	0.592	1.00
127_L	187_L	0.591	1.00
185_D	224_R	0.589	1.00
336_L	427_I	0.588	1.00
312_A	315_E	0.588	1.00
429_I	432_E	0.587	1.00
206_P	243_T	0.586	1.00
17_V	71_F	0.584	1.00
21_K	24_Y	0.584	1.00
329_S	358_L	0.583	1.00
329_S	416_F	0.580	1.00
88_P	91_V	0.579	1.00
60_L	64_S	0.578	1.00
108_M	139_G	0.578	1.00
20_A	25_V	0.577	1.00
109_K	299_S	0.577	1.00
112_I	138_L	0.576	1.00
123_K	234_V	0.576	1.00
332_K	418_I	0.575	1.00
410_V	430_F	0.575	1.00
208_I	211_A	0.574	1.00
336_L	423_M	0.574	1.00
362_I	430_F	0.573	1.00
223_E	226_S	0.572	1.00
129_R	163_I	0.571	1.00
16_V	74_E	0.565	1.00
127_L	190_M	0.564	1.00
123_K	198_F	0.564	1.00
163_I	186_E	0.564	1.00
161_P	164_S	0.563	1.00
129_R	204_A	0.563	1.00
44_N	416_F	0.563	1.00
350_I	434_V	0.562	1.00
187_L	228_V	0.562	1.00
330_E	333_G	0.561	1.00
187_L	191_I	0.561	1.00
145_G	162_A	0.560	1.00
58_E	315_E	0.560	1.00
263_I	286_I	0.559	1.00
63_V	66_A	0.558	1.00
288_E	291_K	0.556	1.00
79_L	277_I	0.556	1.00
97_V	102_E	0.555	1.00
89_G	260_V	0.555	1.00
336_L	360_L	0.555	1.00
106_T	299_S	0.555	1.00
78_Q	81_A	0.554	1.00
34_L	418_I	0.554	1.00
15_P	18_S	0.554	1.00
37_S	394_I	0.552	1.00
245_L	252_L	0.551	1.00
344_A	353_V	0.551	1.00
44_N	320_V	0.550	1.00
89_G	254_T	0.547	1.00
332_K	419_S	0.546	1.00
60_L	312_A	0.546	1.00
335_V	427_I	0.545	1.00
354_R	409_A	0.544	1.00
306_H	309_S	0.541	0.99
424_E	427_I	0.539	0.99
366_A	369_K	0.537	0.99
192_K	198_F	0.537	0.99
364_F	380_I	0.537	0.99
59_Q	63_V	0.536	0.99
128_S	160_Y	0.536	0.99
184_A	187_L	0.535	0.99
230_R	285_S	0.534	0.99
127_L	163_I	0.534	0.99
354_R	361_G	0.533	0.99
84_A	281_V	0.533	0.99
343_A	428_S	0.531	0.99
225_L	234_V	0.531	0.99
133_Y	136_I	0.530	0.99
147_Y	151_Y	0.530	0.99
423_M	426_L	0.529	0.99
17_V	63_V	0.528	0.99
204_A	238_A	0.528	0.99
323_H	328_Q	0.527	0.99
385_V	389_K	0.527	0.99
390_K	436_A	0.524	0.99
197_Q	232_H	0.522	0.99
321_L	324_G	0.521	0.99
430_F	434_V	0.520	0.99
423_M	427_I	0.519	0.99
392_G	429_I	0.519	0.99
235_L	263_I	0.519	0.99
264_A	281_V	0.519	0.99
18_S	21_K	0.517	0.99
187_L	224_R	0.516	0.99
349_I	380_I	0.516	0.99
217_P	222_Y	0.516	0.99
155_H	159_R	0.515	0.99
221_Y	225_L	0.514	0.99
52_V	316_V	0.513	0.99
325_L	416_F	0.509	0.99
15_P	389_K	0.509	0.99
219_P	258_D	0.509	0.99
242_M	359_L	0.508	0.99
226_S	260_V	0.507	0.99
362_I	412_I	0.506	0.99
261_P	264_A	0.506	0.99
426_L	430_F	0.506	0.99
415_P	418_I	0.505	0.99
192_K	231_T	0.505	0.99
87_L	266_L	0.504	0.99
251_M	317_L	0.504	0.99
121_T	200_A	0.504	0.99
150_R	154_T	0.502	0.99
71_F	394_I	0.502	0.99
129_R	225_L	0.502	0.99
151_Y	154_T	0.501	0.99
251_M	320_V	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4e3qA	3	0.9707	100	0.38	Contact Map
3hmuA	2	0.9707	100	0.386	Contact Map
4atqA	7	0.9324	100	0.387	Contact Map
4uoxA	3	0.9099	100	0.388	Contact Map
3oksA	2	0.9347	100	0.392	Contact Map
4a0gA	2	0.9347	100	0.396	Contact Map
4ffcA	4	0.9347	100	0.398	Contact Map
3i4jA	2	0.8671	100	0.401	Contact Map
1z7dA	2	0.8311	100	0.401	Contact Map
3i5tA	2	0.9662	100	0.403	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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