YVRA - BACSU - GREMLIN Contacts

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YVRA - Uncharacterized ABC transporter ATP-binding protein YvrA

UniProt:	O34631	Sequences: MKAEGLSGGYGDSRLINNVSLTVEKGEFLGILGPNGSGKTTLLHLLTGTLPAKKGRVYLAGKLLADYKPKELAQIMAVLPQKMDQAFTFTVEETVAFGRYPFQTGLFRQQTEKGEAIVQEAMEQTGVADFAQKPIRELSGGEQQRVYLAQALAQQPRILFLDEPTNFLDLAYQKDLLDLIKRLTRESGLAAVSVFHDLNTASLYCDGLMFMKNGTAGPKQKPEYAVTEQSIKAVYDTDVTALVHQSSPKPMIVIQPEKDSVKRQSIPFEALLQAGRDDILLQTEIPLRTLSSTPIGAGFSWSRTLIHKRLPDQPDPIEGLTACLSESGFQLQETCAMASSERLDRFVYRTYEDGELSVFICVQTGFSIWILINGYAADQFFIKALMAAEAERTKVLGDGGGTGDILIAATQTQQSENIEQRLNQLIKKGTAECIKEAAELFE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	442 (365)
Sequences:	903 (787)
Seq/√Len:	41.2

ECOLI - RBSA ARAG MACB PROV MALK POTG FBPC POTA LSRA METN CYSA UGPC YCJV CYDC YTFR MDLA MDLB YDCT YADG MSBA MODC CYDD YOJI YEHX OPPD DDPD DPPF DPPD OPPF SAPD YPHE FEPC HISP SAPF MLAF DDPF NIKE YECC FHUC GSIA TAUB GLNQ LPTB FECE XYLG PHNC ALSA LIVG MODF YHDZ SSUB ARTP GLTL PHNK LIVF SUFC PSTB LOLD MGLA FTSE THIQ BTUD ZNUC YHES FETA YBBA NIKD YDDA UUP YEJF CCMA PHNL YNJD YBHF YHIH ETTA
BACSU - YVRA TAGH OPUAA OPUBA OPUCA RBSA YHEH MSMX YURJ METN YFIC YGAD YFIL SUNT YKNV YFIB BMRA YHEI YKNU CYDD YWJA YHAQ YXLF CYDC YDBJ YCBN OPPD YHCH DPPD YKOD APPF YVFR YKFD APPD OPPF YFMF YTRB YUSV ECFA1 FHUC YCLP TCYN YKPA YFMM YLMA BCEA ECSA YVCR YXDL SUFC SKFE FTSE TCYC GLNQ PSTB1 ARTM YXEO NATA ECFA2 YTLC ALBC YJKB YVRO PSTB2 YKNY MNTB YCLH SSUB YTHP ZNUC YUFO YYBJ YFMR YHCG YTRE EXPZ YDIF YYDI
HALSA - Q9HMX3 Q9HMW0 BTUDA Q9HHQ5 Q9HR06 Q9HSQ7 Q9HNZ9 Q9HMT3 Q9HMX2 Q9HMU8 Q9HMG1 Q9HRJ6 PSTB2 Q9HRH8 Q9HHM2 Q9HMG6 PHNC Q9HRV7 Q9HNY3 Y2317 Y1631 PSTB1 Q9HRZ9 Q9HR21 Q9HHR7 Q9HR96 Q9HT03 Q9HMC1 Q9HS04 Q9HQA8
SULSO - Q97UJ9 Q97UF2 Q7LX64 Q97YY4 Q97UY8 Q97VF5 Q97VH6 Q97ZC0 Q97UH3 Q97VK9 Q97VC1 Q97VK8 Q97YP7 Q97YK2 Q97YP3 Q97X18 Q97VF4 Q97YP8 Q97YQ7 Q97UD4 Q980W0 Q97V01 Q97Z03 Q97U54 PSTB Q97UH4 Q97V00 Q97W42 Q7LXM4 Y2030 Q97UG5 Q7LY07 Y1893 Q97VM2 Q97Z56 Q97VY4 Q7LX80 Q97YP4 Q97Z96 Q97ZU0 Q97UC2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
5_G	18_N	7.043	1.00
30_G	205_C	5.446	1.00
234_V	238_D	3.949	1.00
238_D	242_L	3.813	1.00
2_K	22_T	3.748	1.00
122_M	131_A	3.474	1.00
5_G	20_S	3.454	1.00
17_N	215_T	3.125	1.00
238_D	241_A	2.996	1.00
234_V	237_T	2.877	1.00
123_E	128_A	2.781	1.00
234_V	241_A	2.779	1.00
234_V	242_L	2.764	1.00
124_Q	182_R	2.642	1.00
220_Q	224_Y	2.606	1.00
278_D	285_I	2.571	1.00
235_Y	242_L	2.549	1.00
235_Y	238_D	2.520	1.00
237_T	241_A	2.401	1.00
56_R	63_L	2.388	1.00
4_E	56_R	2.332	1.00
282_Q	285_I	2.322	1.00
234_V	239_V	2.315	1.00
236_D	239_V	2.290	1.00
241_A	244_H	2.284	1.00
120_E	124_Q	2.238	1.00
281_L	288_R	2.205	1.00
241_A	245_Q	2.172	0.99
233_A	237_T	2.169	0.99
281_L	285_I	2.139	0.99
210_F	218_P	2.077	0.99
239_V	242_L	2.033	0.99
116_A	120_E	2.031	0.99
153_A	158_I	2.018	0.99
235_Y	239_V	1.974	0.99
242_L	245_Q	1.971	0.99
338_A	342_R	1.949	0.99
236_D	241_A	1.872	0.98
234_V	240_T	1.871	0.98
119_Q	131_A	1.832	0.98
235_Y	241_A	1.823	0.98
238_D	245_Q	1.799	0.98
278_D	281_L	1.785	0.98
8_G	45_L	1.783	0.98
285_I	288_R	1.774	0.98
341_E	344_D	1.754	0.98
92_E	131_A	1.745	0.98
278_D	287_L	1.745	0.98
277_D	281_L	1.743	0.97
292_S	295_I	1.730	0.97
282_Q	288_R	1.730	0.97
14_R	17_N	1.730	0.97
91_V	138_L	1.716	0.97
23_V	192_V	1.716	0.97
270_A	274_A	1.695	0.97
234_V	245_Q	1.689	0.97
27_E	207_G	1.684	0.97
278_D	282_Q	1.663	0.97
240_T	245_Q	1.663	0.97
239_V	244_H	1.658	0.97
244_H	248_P	1.655	0.97
274_A	278_D	1.643	0.96
236_D	240_T	1.634	0.96
237_T	242_L	1.606	0.96
282_Q	287_L	1.603	0.96
280_L	285_I	1.600	0.96
77_A	156_P	1.597	0.96
239_V	245_Q	1.587	0.96
257_E	261_V	1.586	0.96
238_D	244_H	1.573	0.95
178_D	182_R	1.549	0.95
281_L	286_P	1.545	0.95
232_K	236_D	1.545	0.95
245_Q	248_P	1.543	0.95
90_T	93_E	1.540	0.95
7_S	18_N	1.535	0.95
4_E	58_Y	1.529	0.95
237_T	240_T	1.527	0.95
242_L	250_P	1.520	0.94
254_I	258_K	1.509	0.94
233_A	238_D	1.505	0.94
277_D	284_E	1.499	0.94
258_K	261_V	1.477	0.94
195_F	201_A	1.464	0.93
274_A	281_L	1.463	0.93
75_I	157_R	1.457	0.93
307_H	310_L	1.440	0.93
236_D	242_L	1.419	0.92
235_Y	245_Q	1.415	0.92
280_L	286_P	1.411	0.92
233_A	241_A	1.402	0.92
255_Q	260_S	1.387	0.91
274_A	285_I	1.382	0.91
370_I	376_A	1.380	0.91
236_D	244_H	1.377	0.91
60_A	157_R	1.366	0.90
242_L	246_S	1.363	0.90
177_L	200_T	1.361	0.90
180_I	184_T	1.354	0.90
241_A	246_S	1.336	0.89
282_Q	286_P	1.321	0.89
272_L	275_G	1.320	0.89
375_Y	378_D	1.300	0.88
235_Y	243_V	1.296	0.88
258_K	262_K	1.269	0.87
256_P	259_D	1.260	0.87
371_L	376_A	1.257	0.86
274_A	286_P	1.256	0.86
173_Q	200_T	1.255	0.86
273_Q	288_R	1.245	0.86
273_Q	280_L	1.243	0.86
279_I	287_L	1.242	0.86
159_L	189_L	1.237	0.85
271_L	278_D	1.234	0.85
274_A	282_Q	1.232	0.85
253_V	258_K	1.222	0.85
233_A	236_D	1.220	0.85
255_Q	258_K	1.220	0.85
277_D	282_Q	1.209	0.84
253_V	257_E	1.208	0.84
94_T	150_Q	1.205	0.84
114_G	118_V	1.200	0.84
273_Q	286_P	1.198	0.84
281_L	287_L	1.194	0.83
113_K	155_Q	1.188	0.83
277_D	285_I	1.181	0.83
16_I	45_L	1.180	0.83
6_L	45_L	1.168	0.82
218_P	225_A	1.166	0.82
94_T	144_Q	1.165	0.82
232_K	240_T	1.165	0.82
238_D	243_V	1.159	0.82
173_Q	197_D	1.155	0.81
40_T	78_V	1.153	0.81
173_Q	177_L	1.151	0.81
322_A	328_G	1.148	0.81
278_D	288_R	1.147	0.81
254_I	261_V	1.146	0.81
274_A	287_L	1.144	0.81
124_Q	187_S	1.141	0.80
29_L	190_A	1.136	0.80
65_A	68_K	1.130	0.80
163_E	196_H	1.121	0.79
290_L	294_P	1.117	0.79
273_Q	278_D	1.116	0.79
43_L	194_V	1.116	0.79
119_Q	123_E	1.111	0.79
291_S	294_P	1.107	0.78
270_A	273_Q	1.107	0.78
309_R	312_D	1.103	0.78
121_A	152_L	1.099	0.78
273_Q	276_R	1.095	0.78
109_Q	126_G	1.083	0.77
280_L	287_L	1.071	0.76
237_T	243_V	1.067	0.76
270_A	282_Q	1.066	0.76
275_G	279_I	1.063	0.76
3_A	21_L	1.061	0.75
79_L	150_Q	1.059	0.75
340_S	343_L	1.053	0.75
270_A	281_L	1.047	0.74
125_T	149_A	1.031	0.73
25_K	157_R	1.030	0.73
353_D	356_L	1.026	0.73
305_L	310_L	1.025	0.73
241_A	250_P	1.023	0.73
273_Q	281_L	1.017	0.72
274_A	279_I	1.017	0.72
302_S	309_R	1.013	0.72
272_L	277_D	1.011	0.72
279_I	285_I	1.009	0.72
237_T	245_Q	1.008	0.72
232_K	238_D	1.008	0.72
236_D	243_V	1.007	0.71
232_K	239_V	1.006	0.71
270_A	277_D	1.005	0.71
290_L	295_I	1.003	0.71
237_T	244_H	1.001	0.71
252_I	257_E	0.998	0.71
83_M	144_Q	0.995	0.71
278_D	286_P	0.994	0.70
276_R	287_L	0.993	0.70
91_V	130_F	0.990	0.70
49_T	88_T	0.988	0.70
303_R	308_K	0.986	0.70
280_L	288_R	0.975	0.69
3_A	6_L	0.969	0.68
279_I	282_Q	0.966	0.68
235_Y	244_H	0.965	0.68
240_T	244_H	0.955	0.67
271_L	274_A	0.951	0.67
283_T	286_P	0.951	0.67
112_E	116_A	0.949	0.67
275_G	278_D	0.946	0.67
241_A	247_S	0.942	0.66
266_I	273_Q	0.942	0.66
274_A	277_D	0.938	0.66
244_H	250_P	0.937	0.66
302_S	305_L	0.937	0.66
252_I	255_Q	0.936	0.66
218_P	228_E	0.935	0.66
328_G	332_Q	0.926	0.65
274_A	284_E	0.922	0.65
77_A	165_T	0.920	0.64
239_V	247_S	0.919	0.64
177_L	197_D	0.919	0.64
8_G	122_M	0.915	0.64
232_K	235_Y	0.912	0.64
271_L	281_L	0.911	0.64
56_R	65_A	0.908	0.63
238_D	247_S	0.908	0.63
277_D	288_R	0.906	0.63
197_D	200_T	0.904	0.63
8_G	152_L	0.903	0.63
99_R	167_F	0.903	0.63
242_L	248_P	0.903	0.63
35_N	167_F	0.903	0.63
247_S	250_P	0.901	0.63
272_L	281_L	0.899	0.63
16_I	42_L	0.898	0.63
270_A	286_P	0.897	0.62
270_A	278_D	0.897	0.62
254_I	262_K	0.895	0.62
367_S	376_A	0.895	0.62
289_T	295_I	0.895	0.62
266_I	270_A	0.893	0.62
109_Q	121_A	0.893	0.62
266_I	275_G	0.893	0.62
202_S	210_F	0.892	0.62
238_D	248_P	0.888	0.62
234_V	244_H	0.883	0.61
85_Q	195_F	0.880	0.61
33_G	36_G	0.877	0.61
145_R	149_A	0.874	0.60
79_L	94_T	0.868	0.60
173_Q	195_F	0.867	0.60
241_A	248_P	0.864	0.59
301_W	328_G	0.862	0.59
237_T	247_S	0.858	0.59
308_K	311_P	0.857	0.59
281_L	284_E	0.853	0.59
68_K	71_E	0.853	0.59
299_F	305_L	0.850	0.58
270_A	287_L	0.850	0.58
271_L	282_Q	0.847	0.58
254_I	257_E	0.846	0.58
21_L	216_A	0.844	0.58
253_V	256_P	0.844	0.58
279_I	286_P	0.843	0.58
338_A	344_D	0.842	0.58
322_A	331_L	0.840	0.57
98_G	150_Q	0.836	0.57
318_E	323_C	0.835	0.57
39_K	162_D	0.834	0.57
234_V	243_V	0.834	0.57
268_F	272_L	0.834	0.57
252_I	258_K	0.833	0.57
236_D	245_Q	0.830	0.56
26_G	184_T	0.828	0.56
39_K	163_E	0.827	0.56
65_A	69_P	0.826	0.56
37_S	53_K	0.822	0.56
271_L	288_R	0.819	0.55
266_I	288_R	0.819	0.55
270_A	285_I	0.819	0.55
209_M	219_K	0.818	0.55
111_T	180_I	0.818	0.55
274_A	288_R	0.816	0.55
323_C	327_S	0.807	0.54
49_T	195_F	0.804	0.54
263_R	266_I	0.804	0.54
236_D	250_P	0.803	0.54
284_E	288_R	0.803	0.54
252_I	261_V	0.800	0.54
78_V	197_D	0.800	0.54
304_T	309_R	0.797	0.53
313_Q	316_P	0.793	0.53
239_V	243_V	0.792	0.53
9_G	14_R	0.791	0.53
254_I	259_D	0.790	0.53
164_P	207_G	0.788	0.53
275_G	285_I	0.788	0.53
130_F	138_L	0.787	0.52
312_D	319_G	0.786	0.52
242_L	247_S	0.784	0.52
243_V	247_S	0.784	0.52
146_V	172_Y	0.781	0.52
322_A	326_E	0.781	0.52
246_S	250_P	0.779	0.52
275_G	280_L	0.772	0.51
267_P	271_L	0.772	0.51
85_Q	164_P	0.772	0.51
35_N	47_T	0.771	0.51
368_I	373_N	0.767	0.51
367_S	371_L	0.765	0.50
299_F	308_K	0.764	0.50
280_L	283_T	0.763	0.50
246_S	249_K	0.763	0.50
320_L	323_C	0.761	0.50
39_K	81_Q	0.758	0.50
145_R	168_L	0.757	0.50
232_K	241_A	0.756	0.50
183_L	206_D	0.756	0.50
299_F	303_R	0.750	0.49
152_L	376_A	0.749	0.49
36_G	39_K	0.748	0.49
314_P	319_G	0.747	0.49
352_E	367_S	0.746	0.49
266_I	278_D	0.745	0.49
289_T	293_T	0.744	0.48
265_S	271_L	0.740	0.48
278_D	284_E	0.737	0.48
94_T	195_F	0.737	0.48
83_M	94_T	0.737	0.48
16_I	35_N	0.736	0.48
96_A	118_V	0.734	0.48
31_I	42_L	0.733	0.47
35_N	79_L	0.732	0.47
271_L	285_I	0.731	0.47
266_I	271_L	0.731	0.47
371_L	374_G	0.730	0.47
205_C	212_K	0.729	0.47
273_Q	284_E	0.728	0.47
52_A	64_L	0.728	0.47
338_A	343_L	0.725	0.47
35_N	172_Y	0.724	0.47
266_I	285_I	0.722	0.46
270_A	283_T	0.721	0.46
48_G	201_A	0.721	0.46
306_I	313_Q	0.721	0.46
41_T	196_H	0.719	0.46
275_G	281_L	0.716	0.46
274_A	280_L	0.713	0.46
233_A	240_T	0.713	0.46
159_L	165_T	0.712	0.45
42_L	106_L	0.710	0.45
81_Q	162_D	0.708	0.45
289_T	292_S	0.708	0.45
245_Q	250_P	0.706	0.45
168_L	194_V	0.705	0.45
232_K	237_T	0.704	0.45
167_F	200_T	0.702	0.45
168_L	177_L	0.702	0.45
94_T	166_N	0.701	0.44
49_T	166_N	0.700	0.44
240_T	247_S	0.693	0.44
299_F	304_T	0.692	0.44
33_G	38_G	0.692	0.44
338_A	341_E	0.691	0.44
318_E	367_S	0.690	0.43
60_A	158_I	0.690	0.43
83_M	198_L	0.689	0.43
33_G	39_K	0.687	0.43
43_L	47_T	0.685	0.43
266_I	274_A	0.685	0.43
312_D	316_P	0.684	0.43
79_L	161_L	0.683	0.43
268_F	271_L	0.682	0.43
40_T	182_R	0.682	0.43
85_Q	127_V	0.680	0.43
244_H	247_S	0.679	0.42
270_A	275_G	0.676	0.42
270_A	280_L	0.675	0.42
251_M	254_I	0.673	0.42
233_A	242_L	0.672	0.42
176_L	179_L	0.669	0.42
243_V	250_P	0.669	0.42
120_E	123_E	0.667	0.41
150_Q	167_F	0.666	0.41
369_W	374_G	0.665	0.41
277_D	280_L	0.664	0.41
79_L	144_Q	0.664	0.41
284_E	287_L	0.664	0.41
368_I	376_A	0.663	0.41
369_W	373_N	0.662	0.41
39_K	196_H	0.661	0.41
40_T	88_T	0.659	0.41
75_I	106_L	0.657	0.40
130_F	133_K	0.652	0.40
291_S	309_R	0.649	0.40
318_E	321_T	0.649	0.40
366_F	369_W	0.648	0.40
272_L	282_Q	0.648	0.40
5_G	58_Y	0.648	0.40
272_L	278_D	0.647	0.40
340_S	344_D	0.646	0.39
92_E	118_V	0.643	0.39
255_Q	259_D	0.639	0.39
328_G	331_L	0.638	0.39
267_P	273_Q	0.637	0.39
266_I	286_P	0.637	0.39
351_Y	378_D	0.637	0.39
83_M	88_T	0.636	0.39
46_L	57_V	0.636	0.39
173_Q	204_Y	0.635	0.39
79_L	174_K	0.634	0.38
233_A	244_H	0.634	0.38
50_L	166_N	0.633	0.38
34_P	53_K	0.632	0.38
15_L	42_L	0.631	0.38
81_Q	140_G	0.630	0.38
71_E	74_Q	0.629	0.38
322_A	330_Q	0.629	0.38
142_E	190_A	0.628	0.38
273_Q	283_T	0.628	0.38
35_N	150_Q	0.628	0.38
17_N	30_G	0.628	0.38
35_N	99_R	0.626	0.38
321_T	325_S	0.626	0.38
325_S	334_T	0.622	0.37
267_P	287_L	0.619	0.37
311_P	337_M	0.617	0.37
40_T	69_P	0.615	0.37
98_G	154_Q	0.615	0.37
177_L	195_F	0.614	0.37
268_F	281_L	0.614	0.37
32_L	201_A	0.613	0.37
1_M	46_L	0.613	0.37
120_E	155_Q	0.612	0.37
258_K	276_R	0.612	0.37
256_P	261_V	0.611	0.36
299_F	306_I	0.609	0.36
297_A	305_L	0.608	0.36
18_N	215_T	0.608	0.36
256_P	260_S	0.607	0.36
270_A	288_R	0.607	0.36
303_R	307_H	0.607	0.36
10_Y	16_I	0.606	0.36
293_T	296_G	0.598	0.35
367_S	375_Y	0.596	0.35
296_G	306_I	0.596	0.35
321_T	324_L	0.594	0.35
259_D	263_R	0.593	0.35
269_E	278_D	0.591	0.35
273_Q	285_I	0.591	0.35
273_Q	277_D	0.590	0.35
251_M	261_V	0.590	0.35
179_L	182_R	0.590	0.35
198_L	201_A	0.590	0.35
372_I	375_Y	0.589	0.35
258_K	269_E	0.585	0.34
229_Q	241_A	0.582	0.34
372_I	376_A	0.581	0.34
271_L	276_R	0.579	0.34
359_F	363_Q	0.577	0.34
40_T	155_Q	0.576	0.33
32_L	45_L	0.576	0.33
118_V	126_G	0.572	0.33
126_G	179_L	0.572	0.33
31_I	190_A	0.571	0.33
44_H	190_A	0.571	0.33
4_E	377_A	0.571	0.33
339_S	344_D	0.570	0.33
369_W	372_I	0.569	0.33
94_T	135_I	0.569	0.33
208_L	218_P	0.569	0.33
252_I	259_D	0.568	0.33
95_V	153_A	0.566	0.33
21_L	199_N	0.563	0.32
24_E	179_L	0.563	0.32
200_T	204_Y	0.563	0.32
267_P	272_L	0.562	0.32
239_V	249_K	0.562	0.32
334_T	337_M	0.561	0.32
252_I	260_S	0.561	0.32
286_P	290_L	0.560	0.32
239_V	248_P	0.560	0.32
193_S	204_Y	0.560	0.32
269_E	287_L	0.559	0.32
244_H	249_K	0.559	0.32
140_G	194_V	0.558	0.32
2_K	58_Y	0.557	0.32
91_V	211_M	0.557	0.32
59_L	158_I	0.557	0.32
225_A	228_E	0.556	0.32
371_L	375_Y	0.553	0.32
273_Q	282_Q	0.553	0.32
16_I	95_V	0.551	0.31
13_S	23_V	0.550	0.31
58_Y	155_Q	0.550	0.31
267_P	270_A	0.550	0.31
92_E	132_Q	0.548	0.31
234_V	247_S	0.547	0.31
64_L	71_E	0.543	0.31
156_P	196_H	0.543	0.31
322_A	325_S	0.541	0.31
275_G	286_P	0.541	0.31
48_G	164_P	0.541	0.31
177_L	198_L	0.540	0.31
127_V	146_V	0.538	0.30
317_I	324_L	0.537	0.30
108_R	113_K	0.536	0.30
262_K	265_S	0.535	0.30
81_Q	195_F	0.535	0.30
201_A	207_G	0.535	0.30
173_Q	198_L	0.534	0.30
7_S	206_D	0.534	0.30
374_G	377_A	0.534	0.30
336_A	340_S	0.534	0.30
328_G	333_E	0.533	0.30
267_P	274_A	0.533	0.30
225_A	229_Q	0.533	0.30
128_A	131_A	0.530	0.30
257_E	262_K	0.530	0.30
150_Q	194_V	0.530	0.30
275_G	288_R	0.529	0.30
99_R	161_L	0.529	0.30
209_M	216_A	0.528	0.30
278_D	283_T	0.527	0.30
334_T	355_E	0.525	0.29
50_L	84_D	0.524	0.29
22_T	191_A	0.524	0.29
257_E	260_S	0.524	0.29
19_V	44_H	0.524	0.29
221_K	224_Y	0.522	0.29
136_R	157_R	0.521	0.29
255_Q	261_V	0.520	0.29
177_L	204_Y	0.520	0.29
107_F	154_Q	0.519	0.29
326_E	344_D	0.517	0.29
42_L	211_M	0.516	0.29
19_V	30_G	0.516	0.29
351_Y	356_L	0.515	0.29
273_Q	279_I	0.514	0.29
73_A	172_Y	0.513	0.28
8_G	201_A	0.513	0.28
238_D	246_S	0.513	0.28
92_E	122_M	0.513	0.28
268_F	275_G	0.512	0.28
92_E	96_A	0.512	0.28
35_N	168_L	0.512	0.28
266_I	269_E	0.512	0.28
227_T	266_I	0.512	0.28
43_L	200_T	0.512	0.28
78_V	99_R	0.511	0.28
358_V	363_Q	0.509	0.28
13_S	37_S	0.506	0.28
275_G	283_T	0.506	0.28
272_L	280_L	0.505	0.28
16_I	30_G	0.504	0.28
167_F	194_V	0.504	0.28
273_Q	287_L	0.503	0.28
120_E	377_A	0.502	0.28
144_Q	150_Q	0.501	0.28
369_W	377_A	0.501	0.28
261_V	266_I	0.500	0.27
257_E	265_S	0.500	0.27
198_L	205_C	0.500	0.27

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4f4cA	1	0.509	100	0.316	Contact Map
4ry2A	2	0.5339	100	0.316	Contact Map
3tuiC	2	0.7534	100	0.333	Contact Map
4q9hA	1	0.5385	100	0.34	Contact Map
4a82A	2	0.5317	100	0.344	Contact Map
4yerA	2	0.6357	100	0.345	Contact Map
4mrsA	2	0.552	100	0.346	Contact Map
3b5xA	2	0.5339	100	0.347	Contact Map
3b60A	2	0.5339	100	0.351	Contact Map
3nh6A	1	0.5339	100	0.351	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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