YFKQ - BACSU - GREMLIN Contacts

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YFKQ - Uncharacterized membrane protein YfkQ

UniProt:	O34486	Sequences: MNKRDKALQLIKELEDNQDRPISPNLKENLENLTLLTEGCSDIVFRQFDFGNGLCGFIVYIEGIVKSEHIQDHALRPFLMHLTDQIDEHEEALQNTLSISSVALETSMSKVAASIIEGNAVLFADGHSKGLILNIKGGQRRSIEEPITESTIRGSREGFTESLRVNTALVRFRVKTFQLKMISFKIGTKTKTDVVLAYIDGLADPKVIDKAKKRIKKIKIDAVLESGYIEEFIEDDTYSPFPQLQYTERPDTVAAQLLEGRFAIFTDNTPFVLTGPITFWQLMQASEDYYERYLMSNLIRWLRYMFLFVALYLPAIYVAVITYHQDLMPTNLMFSVASAREPIPFPAIIEALIMEISFEALREAGVRLPKTIGQTVSILGALVIGTAAVEAGIVSAPMVIIVSLTGIASFTIPRFNLAISIRMLRFPLMFLASIFGIFGIMLGTIILVLHLCKLQSFGIPYLSGISPFKRDEVKDIFVRAPWWTMTRRPGTYSRGNGQKGAKREDPKDEENNI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	513 (478)
Sequences:	2260 (1884)
Seq/√Len:	86.2

BACSU - YFKQ GERKA YNDD GERBA GERAA SP5AF

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
182_I	212_K	7.340	1.00
253_V	263_A	7.082	1.00
431_L	443_G	5.747	1.00
188_T	219_K	4.847	1.00
120_A	135_I	4.718	1.00
203_A	208_I	4.575	1.00
186_I	215_I	3.932	1.00
386_T	390_E	3.581	1.00
234_E	292_R	3.530	1.00
265_F	272_V	3.254	1.00
318_V	429_M	3.108	1.00
181_M	195_V	3.049	1.00
196_L	212_K	3.036	1.00
244_L	275_G	3.016	1.00
115_I	121_V	2.998	1.00
181_M	197_A	2.965	1.00
199_I	202_L	2.913	1.00
170_V	265_F	2.873	1.00
157_E	173_R	2.815	1.00
351_A	398_M	2.799	1.00
312_Y	444_T	2.787	1.00
225_E	269_T	2.776	1.00
107_S	110_K	2.720	1.00
121_V	132_I	2.684	1.00
164_R	167_T	2.669	1.00
428_L	443_G	2.656	1.00
222_A	258_L	2.649	1.00
30_L	57_F	2.632	1.00
105_E	132_I	2.600	1.00
189_K	201_G	2.575	1.00
205_P	495_G	2.488	1.00
452_C	462_L	2.488	1.00
247_T	253_V	2.480	1.00
170_V	197_A	2.444	1.00
122_L	133_L	2.335	1.00
189_K	496_N	2.332	1.00
199_I	257_L	2.329	1.00
111_V	121_V	2.310	1.00
178_Q	201_G	2.308	1.00
104_L	129_K	2.295	1.00
432_A	440_I	2.279	1.00
180_K	200_D	2.226	1.00
208_I	262_F	2.218	1.00
210_K	214_R	2.193	1.00
184_F	216_K	2.182	1.00
24_P	29_N	2.178	1.00
38_E	180_K	2.173	1.00
355_E	425_R	2.166	1.00
146_P	158_G	2.155	1.00
428_L	447_L	2.146	1.00
23_S	29_N	2.135	1.00
176_T	189_K	2.111	1.00
155_S	290_Y	2.096	1.00
40_C	180_K	2.091	1.00
211_A	275_G	2.089	1.00
105_E	110_K	2.005	1.00
351_A	429_M	2.001	1.00
283_M	307_L	1.972	1.00
211_A	262_F	1.947	1.00
214_R	235_D	1.924	1.00
22_I	123_F	1.917	1.00
186_I	194_V	1.903	1.00
256_Q	274_T	1.869	1.00
298_L	423_M	1.837	1.00
113_A	191_K	1.833	1.00
184_F	212_K	1.826	1.00
47_Q	55_C	1.821	1.00
220_I	232_F	1.798	1.00
43_I	61_I	1.798	1.00
438_F	442_L	1.795	1.00
174_V	254_A	1.775	1.00
62_E	164_R	1.762	1.00
209_D	213_K	1.753	1.00
348_I	433_S	1.722	1.00
200_D	205_P	1.708	1.00
194_V	266_T	1.708	1.00
25_N	28_E	1.707	1.00
39_G	182_I	1.706	1.00
145_E	158_G	1.703	1.00
210_K	213_K	1.703	1.00
315_A	432_A	1.696	1.00
211_A	264_I	1.671	1.00
468_F	473_V	1.663	1.00
163_L	195_V	1.657	1.00
123_F	130_G	1.629	1.00
34_T	45_F	1.610	1.00
27_K	55_C	1.608	1.00
119_N	136_K	1.602	1.00
114_S	119_N	1.599	1.00
58_I	122_L	1.598	1.00
31_E	35_L	1.591	1.00
39_G	200_D	1.591	1.00
184_F	196_L	1.590	1.00
218_I	229_I	1.587	1.00
306_F	411_T	1.582	1.00
289_Y	475_D	1.576	1.00
114_S	132_I	1.558	1.00
197_A	272_V	1.549	1.00
277_I	282_L	1.544	1.00
23_S	28_E	1.531	1.00
190_T	222_A	1.526	1.00
185_K	193_D	1.526	1.00
196_L	262_F	1.508	1.00
106_T	129_K	1.491	0.99
205_P	209_D	1.489	0.99
306_F	360_A	1.480	0.99
111_V	130_G	1.478	0.99
226_S	266_T	1.475	0.99
183_S	193_D	1.468	0.99
307_L	421_I	1.463	0.99
464_G	467_P	1.432	0.99
167_T	181_M	1.432	0.99
310_A	412_I	1.424	0.99
239_S	243_Q	1.423	0.99
221_D	488_R	1.415	0.99
37_T	116_I	1.406	0.99
101_S	134_N	1.400	0.99
261_R	281_Q	1.393	0.99
301_W	305_M	1.386	0.99
45_F	57_F	1.383	0.99
66_K	137_G	1.383	0.99
213_K	217_K	1.382	0.99
314_P	405_T	1.379	0.99
43_I	59_V	1.377	0.99
185_K	191_K	1.375	0.99
70_I	120_A	1.362	0.99
450_H	454_L	1.350	0.99
264_I	275_G	1.348	0.99
174_V	258_L	1.341	0.99
30_L	34_T	1.335	0.99
26_L	123_F	1.319	0.99
297_N	301_W	1.312	0.99
221_D	499_K	1.307	0.99
212_K	216_K	1.302	0.99
244_L	273_L	1.301	0.99
319_A	440_I	1.301	0.99
346_P	349_I	1.298	0.99
63_G	167_T	1.297	0.99
70_I	135_I	1.294	0.99
496_N	499_K	1.292	0.99
239_S	450_H	1.285	0.98
63_G	168_A	1.276	0.98
103_A	110_K	1.274	0.98
358_F	406_G	1.274	0.98
253_V	272_V	1.264	0.98
30_L	47_Q	1.262	0.98
190_T	258_L	1.257	0.98
65_V	70_I	1.249	0.98
389_V	400_I	1.243	0.98
159_F	170_V	1.242	0.98
145_E	156_R	1.233	0.98
151_T	285_A	1.219	0.98
357_S	383_V	1.217	0.98
28_E	31_E	1.204	0.98
163_L	265_F	1.200	0.98
359_E	426_F	1.194	0.97
427_P	431_L	1.192	0.97
207_V	262_F	1.181	0.97
305_M	356_I	1.174	0.97
143_I	157_E	1.167	0.97
348_I	430_F	1.157	0.97
202_L	488_R	1.153	0.97
147_I	156_R	1.153	0.97
203_A	262_F	1.142	0.97
355_E	402_V	1.128	0.96
243_Q	292_R	1.128	0.96
345_F	349_I	1.127	0.96
121_V	130_G	1.120	0.96
183_S	195_V	1.116	0.96
45_F	59_V	1.106	0.96
339_A	396_A	1.102	0.96
451_L	462_L	1.099	0.96
50_F	56_G	1.097	0.96
213_K	216_K	1.094	0.96
68_E	72_D	1.094	0.96
26_L	57_F	1.091	0.96
157_E	172_F	1.090	0.96
167_T	197_A	1.090	0.96
429_M	433_S	1.088	0.96
26_L	125_D	1.088	0.96
157_E	268_N	1.081	0.95
263_A	274_T	1.080	0.95
488_R	496_N	1.078	0.95
49_D	55_C	1.078	0.95
178_Q	200_D	1.076	0.95
204_D	459_I	1.075	0.95
90_E	93_L	1.074	0.95
157_E	169_L	1.073	0.95
119_N	134_N	1.072	0.95
355_E	422_R	1.068	0.95
224_L	228_Y	1.067	0.95
39_G	180_K	1.062	0.95
117_E	175_K	1.062	0.95
211_A	457_F	1.062	0.95
262_F	275_G	1.060	0.95
488_R	499_K	1.058	0.95
241_F	424_L	1.055	0.95
63_G	164_R	1.053	0.95
253_V	274_T	1.051	0.95
32_N	36_L	1.045	0.95
312_Y	428_L	1.045	0.95
201_G	205_P	1.036	0.94
189_K	199_I	1.035	0.94
274_T	281_Q	1.033	0.94
160_T	166_N	1.033	0.94
194_V	264_I	1.028	0.94
263_A	272_V	1.027	0.94
150_S	370_K	1.026	0.94
144_E	158_G	1.026	0.94
278_T	281_Q	1.023	0.94
280_W	465_I	1.021	0.94
197_A	257_L	1.018	0.94
33_L	43_I	1.018	0.94
152_I	287_E	1.017	0.94
184_F	215_I	1.012	0.94
174_V	199_I	1.010	0.94
138_G	162_S	1.009	0.93
282_L	417_L	1.009	0.93
283_M	304_Y	1.004	0.93
46_R	102_V	1.000	0.93
65_V	135_I	0.996	0.93
352_L	429_M	0.995	0.93
64_I	168_A	0.994	0.93
204_D	493_S	0.994	0.93
234_E	243_Q	0.992	0.93
22_I	111_V	0.991	0.93
41_S	182_I	0.987	0.93
365_G	373_G	0.982	0.93
347_A	398_M	0.981	0.92
355_E	426_F	0.980	0.92
29_N	123_F	0.975	0.92
189_K	488_R	0.974	0.92
30_L	59_V	0.973	0.92
408_A	411_T	0.973	0.92
465_I	477_F	0.967	0.92
279_F	462_L	0.966	0.92
315_A	428_L	0.963	0.92
210_K	235_D	0.962	0.92
231_E	482_W	0.955	0.91
47_Q	57_F	0.955	0.91
170_V	253_V	0.951	0.91
424_L	447_L	0.948	0.91
57_F	123_F	0.947	0.91
300_R	475_D	0.946	0.91
259_E	289_Y	0.945	0.91
192_T	266_T	0.942	0.91
241_F	450_H	0.941	0.91
196_L	211_A	0.934	0.91
318_V	351_A	0.932	0.90
323_Y	434_I	0.931	0.90
358_F	377_S	0.931	0.90
175_K	193_D	0.930	0.90
214_R	233_I	0.928	0.90
321_I	347_A	0.926	0.90
119_N	132_I	0.922	0.90
231_E	479_R	0.916	0.90
409_S	418_A	0.916	0.90
280_W	476_I	0.914	0.90
173_R	192_T	0.912	0.89
27_K	31_E	0.911	0.89
32_N	108_M	0.910	0.89
146_P	248_E	0.908	0.89
24_P	128_S	0.904	0.89
189_K	202_L	0.903	0.89
138_G	172_F	0.903	0.89
244_L	457_F	0.902	0.89
355_E	362_R	0.900	0.89
209_D	212_K	0.899	0.89
103_A	114_S	0.899	0.89
298_L	359_E	0.896	0.89
22_I	130_G	0.891	0.88
241_F	447_L	0.884	0.88
105_E	121_V	0.880	0.88
309_V	404_L	0.880	0.88
142_S	160_T	0.877	0.88
110_K	113_A	0.877	0.88
278_T	282_L	0.876	0.88
56_G	122_L	0.874	0.87
33_L	59_V	0.871	0.87
480_A	485_M	0.870	0.87
42_D	171_R	0.870	0.87
225_E	290_Y	0.867	0.87
105_E	111_V	0.867	0.87
241_F	451_L	0.867	0.87
255_A	259_E	0.866	0.87
91_E	94_Q	0.862	0.87
111_V	123_F	0.859	0.86
376_V	406_G	0.855	0.86
208_I	211_A	0.854	0.86
218_I	221_D	0.850	0.86
245_Q	281_Q	0.846	0.86
48_F	75_L	0.845	0.86
170_V	179_L	0.844	0.85
241_F	461_Y	0.842	0.85
113_A	185_K	0.841	0.85
168_A	172_F	0.840	0.85
422_R	426_F	0.840	0.85
149_E	252_T	0.839	0.85
172_F	267_D	0.839	0.85
441_M	445_I	0.836	0.85
164_R	193_D	0.835	0.85
224_L	258_L	0.833	0.85
44_V	62_E	0.832	0.85
368_L	410_F	0.832	0.85
362_R	365_G	0.832	0.85
99_I	133_L	0.826	0.84
415_F	419_I	0.824	0.84
151_T	286_S	0.824	0.84
370_K	376_V	0.823	0.84
348_I	429_M	0.823	0.84
365_G	375_T	0.819	0.84
252_T	286_S	0.819	0.84
277_I	281_Q	0.816	0.84
173_R	268_N	0.814	0.83
339_A	397_P	0.813	0.83
148_T	271_F	0.811	0.83
59_V	123_F	0.811	0.83
306_F	408_A	0.808	0.83
279_F	417_L	0.808	0.83
141_R	161_E	0.806	0.83
74_A	133_L	0.805	0.83
159_F	253_V	0.804	0.83
428_L	432_A	0.802	0.82
365_G	374_Q	0.798	0.82
417_L	420_S	0.797	0.82
148_T	372_I	0.796	0.82
162_S	193_D	0.795	0.82
140_R	165_V	0.794	0.82
240_P	450_H	0.791	0.82
59_V	115_I	0.791	0.82
227_G	231_E	0.790	0.82
36_L	112_A	0.790	0.82
494_R	497_G	0.783	0.81
377_S	397_P	0.781	0.81
72_D	76_R	0.780	0.81
37_T	40_C	0.780	0.81
430_F	433_S	0.777	0.80
190_T	224_L	0.777	0.80
279_F	411_T	0.776	0.80
487_R	498_Q	0.776	0.80
428_L	431_L	0.776	0.80
452_C	466_S	0.776	0.80
90_E	94_Q	0.775	0.80
204_D	494_R	0.772	0.80
225_E	228_Y	0.772	0.80
196_L	203_A	0.771	0.80
487_R	490_G	0.770	0.80
471_D	487_R	0.770	0.80
245_Q	277_I	0.768	0.80
256_Q	281_Q	0.766	0.79
234_E	237_T	0.763	0.79
359_E	362_R	0.759	0.79
162_S	165_V	0.757	0.79
75_L	79_L	0.757	0.79
202_L	221_D	0.752	0.78
56_G	124_A	0.751	0.78
139_Q	168_A	0.751	0.78
189_K	221_D	0.751	0.78
97_L	102_V	0.750	0.78
140_R	162_S	0.748	0.78
93_L	104_L	0.747	0.78
175_K	267_D	0.747	0.78
297_N	480_A	0.745	0.78
37_T	112_A	0.740	0.77
375_T	381_A	0.739	0.77
340_R	343_I	0.738	0.77
207_V	457_F	0.732	0.76
162_S	267_D	0.732	0.76
311_L	424_L	0.732	0.76
282_L	422_R	0.727	0.76
41_S	167_T	0.725	0.76
390_E	396_A	0.722	0.75
169_L	172_F	0.720	0.75
228_Y	255_A	0.719	0.75
424_L	427_P	0.717	0.75
247_T	263_A	0.715	0.75
69_H	135_I	0.713	0.74
275_G	457_F	0.711	0.74
335_S	397_P	0.711	0.74
255_A	284_Q	0.710	0.74
153_R	230_E	0.710	0.74
63_G	138_G	0.709	0.74
220_I	223_V	0.709	0.74
117_E	136_K	0.708	0.74
314_P	355_E	0.708	0.74
151_T	287_E	0.707	0.74
111_V	115_I	0.707	0.74
298_L	356_I	0.705	0.74
106_T	110_K	0.702	0.73
153_R	158_G	0.701	0.73
176_T	496_N	0.700	0.73
342_P	403_S	0.698	0.73
146_P	271_F	0.698	0.73
324_H	437_I	0.698	0.73
108_M	123_F	0.696	0.73
357_S	404_L	0.695	0.73
322_T	347_A	0.692	0.72
217_K	455_Q	0.692	0.72
347_A	377_S	0.692	0.72
291_E	419_I	0.690	0.72
205_P	208_I	0.689	0.72
426_F	430_F	0.689	0.72
22_I	29_N	0.689	0.72
339_A	381_A	0.686	0.72
282_L	380_G	0.686	0.72
32_N	35_L	0.686	0.72
345_F	393_I	0.685	0.71
474_K	480_A	0.684	0.71
48_F	56_G	0.684	0.71
49_D	95_N	0.684	0.71
402_V	426_F	0.684	0.71
201_G	495_G	0.683	0.71
471_D	474_K	0.683	0.71
354_M	398_M	0.683	0.71
280_W	304_Y	0.683	0.71
160_T	165_V	0.683	0.71
167_T	195_V	0.682	0.71
469_K	472_E	0.682	0.71
405_T	429_M	0.682	0.71
245_Q	282_L	0.681	0.71
33_L	57_F	0.681	0.71
489_P	499_K	0.681	0.71
253_V	440_I	0.679	0.71
344_P	363_E	0.678	0.71
283_M	417_L	0.678	0.71
94_Q	104_L	0.677	0.71
22_I	32_N	0.676	0.70
463_S	467_P	0.676	0.70
310_A	421_I	0.673	0.70
463_S	472_E	0.673	0.70
113_A	305_M	0.667	0.69
220_I	226_S	0.666	0.69
459_I	492_Y	0.664	0.69
279_F	307_L	0.664	0.69
39_G	212_K	0.662	0.69
226_S	273_L	0.658	0.68
316_I	320_V	0.658	0.68
67_S	162_S	0.656	0.68
474_K	487_R	0.655	0.68
282_L	414_R	0.654	0.68
144_E	147_I	0.653	0.68
184_F	264_I	0.651	0.68
245_Q	256_Q	0.651	0.68
427_P	447_L	0.650	0.67
206_K	209_D	0.649	0.67
348_I	352_L	0.649	0.67
286_S	290_Y	0.648	0.67
101_S	174_V	0.648	0.67
486_T	498_Q	0.646	0.67
379_L	406_G	0.646	0.67
360_A	377_S	0.645	0.67
316_I	465_I	0.645	0.67
202_L	229_I	0.645	0.67
197_A	265_F	0.644	0.67
223_V	229_I	0.644	0.67
143_I	169_L	0.643	0.67
40_C	43_I	0.643	0.67
389_V	396_A	0.643	0.67
223_V	228_Y	0.643	0.67
44_V	60_Y	0.642	0.67
182_I	196_L	0.640	0.66
33_L	123_F	0.640	0.66
344_P	387_A	0.639	0.66
351_A	402_V	0.639	0.66
278_T	459_I	0.639	0.66
117_E	193_D	0.639	0.66
284_Q	300_R	0.638	0.66
259_E	499_K	0.638	0.66
242_P	282_L	0.638	0.66
136_K	164_R	0.637	0.66
37_T	43_I	0.636	0.66
157_E	254_A	0.636	0.66
227_G	232_F	0.636	0.66
34_T	59_V	0.635	0.66
423_M	496_N	0.633	0.65
233_I	457_F	0.632	0.65
170_V	254_A	0.632	0.65
246_Y	271_F	0.628	0.65
277_I	412_I	0.628	0.65
318_V	323_Y	0.628	0.65
386_T	403_S	0.627	0.65
235_D	456_S	0.626	0.65
245_Q	274_T	0.625	0.64
442_L	446_I	0.625	0.64
309_V	313_L	0.625	0.64
173_R	254_A	0.624	0.64
61_I	64_I	0.624	0.64
43_I	199_I	0.622	0.64
429_M	432_A	0.621	0.64
48_F	58_I	0.621	0.64
240_P	423_M	0.620	0.64
55_C	94_Q	0.620	0.64
408_A	468_F	0.619	0.64
102_V	131_L	0.618	0.64
55_C	125_D	0.618	0.64
78_F	122_L	0.618	0.64
137_G	144_E	0.617	0.63
312_Y	440_I	0.617	0.63
492_Y	495_G	0.617	0.63
70_I	99_I	0.616	0.63
470_R	474_K	0.615	0.63
368_L	381_A	0.614	0.63
377_S	455_Q	0.612	0.63
492_Y	497_G	0.612	0.63
324_H	436_G	0.611	0.63
377_S	382_L	0.611	0.63
104_L	131_L	0.611	0.63
202_L	496_N	0.610	0.63
361_L	399_V	0.609	0.62
366_V	371_T	0.608	0.62
440_I	443_G	0.607	0.62
393_I	400_I	0.606	0.62
204_D	208_I	0.606	0.62
392_G	467_P	0.605	0.62
256_Q	261_R	0.605	0.62
310_A	409_S	0.605	0.62
415_F	418_A	0.604	0.62
48_F	79_L	0.603	0.62
243_Q	384_I	0.602	0.62
325_Q	347_A	0.601	0.61
33_L	37_T	0.600	0.61
101_S	162_S	0.600	0.61
355_E	429_M	0.600	0.61
196_L	208_I	0.600	0.61
456_S	460_P	0.598	0.61
25_N	30_L	0.597	0.61
388_A	394_V	0.596	0.61
151_T	155_S	0.596	0.61
149_E	306_F	0.596	0.61
340_R	386_T	0.596	0.61
207_V	459_I	0.595	0.61
277_I	357_S	0.594	0.61
263_A	275_G	0.593	0.60
114_S	186_I	0.591	0.60
340_R	395_S	0.591	0.60
35_L	38_E	0.590	0.60
333_M	372_I	0.590	0.60
41_S	183_S	0.590	0.60
307_L	412_I	0.589	0.60
230_E	246_Y	0.589	0.60
240_P	295_M	0.589	0.60
58_I	120_A	0.588	0.60
236_D	243_Q	0.588	0.60
139_Q	165_V	0.587	0.60
106_T	109_S	0.585	0.59
344_P	436_G	0.585	0.59
315_A	415_F	0.584	0.59
448_V	452_C	0.584	0.59
163_L	267_D	0.584	0.59
291_E	416_N	0.583	0.59
469_K	490_G	0.582	0.59
247_T	413_P	0.580	0.59
146_P	290_Y	0.580	0.59
140_R	160_T	0.580	0.59
249_R	274_T	0.580	0.59
97_L	133_L	0.578	0.58
194_V	229_I	0.578	0.58
475_D	485_M	0.574	0.58
295_M	336_V	0.574	0.58
261_R	284_Q	0.573	0.58
157_E	192_T	0.573	0.58
189_K	258_L	0.572	0.58
474_K	485_M	0.572	0.58
203_A	207_V	0.572	0.58
293_Y	381_A	0.571	0.58
328_M	331_N	0.571	0.58
194_V	215_I	0.571	0.58
214_R	456_S	0.570	0.57
479_R	482_W	0.569	0.57
383_V	451_L	0.569	0.57
310_A	314_P	0.568	0.57
237_T	483_W	0.568	0.57
314_P	401_I	0.568	0.57
475_D	479_R	0.568	0.57
64_I	172_F	0.566	0.57
378_I	400_I	0.565	0.57
62_E	67_S	0.565	0.57
21_P	107_S	0.565	0.57
90_E	104_L	0.564	0.57
473_V	476_I	0.564	0.57
313_L	404_L	0.564	0.57
163_L	193_D	0.563	0.56
178_Q	189_K	0.563	0.56
228_Y	482_W	0.562	0.56
429_M	435_F	0.561	0.56
238_Y	484_T	0.561	0.56
221_D	489_P	0.561	0.56
124_A	487_R	0.561	0.56
358_F	365_G	0.560	0.56
158_G	271_F	0.560	0.56
93_L	311_L	0.560	0.56
347_A	382_L	0.559	0.56
201_G	494_R	0.559	0.56
182_I	200_D	0.558	0.56
36_L	177_F	0.558	0.56
188_T	496_N	0.557	0.56
471_D	495_G	0.556	0.56
327_L	415_F	0.556	0.56
278_T	377_S	0.556	0.56
315_A	418_A	0.554	0.55
368_L	372_I	0.553	0.55
362_R	424_L	0.553	0.55
220_I	482_W	0.553	0.55
365_G	371_T	0.552	0.55
26_L	29_N	0.551	0.55
395_S	436_G	0.551	0.55
153_R	226_S	0.551	0.55
210_K	217_K	0.550	0.55
444_T	447_L	0.550	0.55
196_L	331_N	0.549	0.55
316_I	437_I	0.549	0.55
162_S	172_F	0.548	0.54
371_T	377_S	0.548	0.54
112_A	115_I	0.548	0.54
284_Q	289_Y	0.547	0.54
225_E	229_I	0.546	0.54
361_L	383_V	0.546	0.54
170_V	372_I	0.545	0.54
149_E	339_A	0.544	0.54
218_I	232_F	0.544	0.54
215_I	264_I	0.544	0.54
287_E	412_I	0.543	0.54
257_L	412_I	0.543	0.54
33_L	45_F	0.542	0.54
124_A	127_H	0.542	0.54
210_K	233_I	0.542	0.54
156_R	271_F	0.542	0.54
144_E	434_I	0.541	0.54
430_F	434_I	0.541	0.54
160_T	487_R	0.539	0.53
402_V	429_M	0.539	0.53
363_E	387_A	0.538	0.53
364_A	406_G	0.537	0.53
88_E	91_E	0.536	0.53
343_I	395_S	0.535	0.53
363_E	367_R	0.535	0.53
169_L	173_R	0.535	0.53
315_A	355_E	0.535	0.53
288_D	363_E	0.534	0.53
495_G	498_Q	0.534	0.53
314_P	429_M	0.533	0.52
321_I	333_M	0.533	0.52
207_V	211_A	0.533	0.52
186_I	208_I	0.533	0.52
237_T	292_R	0.533	0.52
245_Q	252_T	0.532	0.52
306_F	491_T	0.532	0.52
372_I	376_V	0.532	0.52
31_E	34_T	0.531	0.52
283_M	336_V	0.531	0.52
32_N	112_A	0.531	0.52
259_E	262_F	0.530	0.52
361_L	379_L	0.530	0.52
327_L	406_G	0.529	0.52
76_R	80_M	0.529	0.52
109_S	191_K	0.528	0.52
240_P	355_E	0.528	0.52
159_F	272_V	0.526	0.52
282_L	355_E	0.526	0.52
109_S	113_A	0.526	0.52
204_D	492_Y	0.525	0.51
167_T	259_E	0.525	0.51
37_T	176_T	0.524	0.51
460_P	467_P	0.524	0.51
233_I	244_L	0.524	0.51
343_I	400_I	0.523	0.51
219_K	488_R	0.523	0.51
207_V	493_S	0.522	0.51
358_F	402_V	0.522	0.51
58_I	133_L	0.522	0.51
328_M	371_T	0.521	0.51
333_M	358_F	0.521	0.51
240_P	249_R	0.521	0.51
207_V	210_K	0.519	0.51
250_P	254_A	0.519	0.51
281_Q	284_Q	0.519	0.51
156_R	248_E	0.519	0.51
211_A	366_V	0.518	0.50
173_R	249_R	0.518	0.50
368_L	384_I	0.517	0.50
108_M	111_V	0.517	0.50
278_T	287_E	0.517	0.50
188_T	205_P	0.516	0.50
319_A	432_A	0.515	0.50
479_R	485_M	0.515	0.50
199_I	265_F	0.515	0.50
170_V	173_R	0.514	0.50
223_V	266_T	0.514	0.50
36_L	108_M	0.514	0.50
83_T	96_T	0.512	0.50
259_E	284_Q	0.512	0.50
308_F	312_Y	0.512	0.50
190_T	377_S	0.512	0.50
317_Y	436_G	0.511	0.50
339_A	395_S	0.511	0.50
308_F	353_I	0.510	0.49
242_P	417_L	0.510	0.49
374_Q	380_G	0.510	0.49
63_G	172_F	0.509	0.49
159_F	166_N	0.508	0.49
259_E	475_D	0.508	0.49
238_Y	423_M	0.508	0.49
398_M	405_T	0.508	0.49
205_P	212_K	0.508	0.49
427_P	446_I	0.507	0.49
25_N	33_L	0.506	0.49
312_Y	425_R	0.506	0.49
318_V	433_S	0.506	0.49
381_A	384_I	0.505	0.49
278_T	321_I	0.505	0.49
470_R	473_V	0.505	0.49
311_L	421_I	0.505	0.49
25_N	29_N	0.504	0.49
79_L	82_L	0.502	0.48
324_H	378_I	0.501	0.48
112_A	177_F	0.501	0.48
350_E	363_E	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3hh1A	2	0.2027	31.7	0.981	Contact Map
3kpeA	3	0.0955	14.8	0.984	Contact Map
4g3oA	1	0.0858	14.1	0.984	Contact Map
4bemA	3	0.154	7.6	0.986	Contact Map
2hz7A	1	0.0019	7.1	0.986	Contact Map
2qwvA	2	0.3314	7.1	0.986	Contact Map
1ez3A	1	0.2144	6.4	0.987	Contact Map
2xquA	3	0.1559	5.1	0.987	Contact Map
1qzmA	1	0.152	5.1	0.987	Contact Map
2xndJ	3	0.1404	4.8	0.987	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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