GREMLIN Database
YTCJ - Putative amidohydrolase YtcJ
UniProt: O34355 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 529 (511)
Sequences: 4567 (3520)
Seq/√Len: 155.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
462_P465_E4.2861.00
412_K416_S4.1931.00
152_A155_Q3.7111.00
486_K491_Y3.6101.00
23_V487_I3.5481.00
413_T459_E3.4111.00
519_V524_I2.9951.00
318_G350_K2.8801.00
517_K524_I2.7421.00
353_P356_G2.7401.00
129_D151_S2.7371.00
349_E374_R2.7221.00
208_T248_K2.6491.00
152_A156_A2.6191.00
488_A491_Y2.5771.00
20_T33_T2.5141.00
297_K342_E2.4361.00
295_L310_Q2.3891.00
32_G39_L2.3781.00
204_D242_K2.3401.00
215_W525_V2.3311.00
165_D173_K2.3241.00
56_A516_K2.3201.00
5_W53_L2.3151.00
161_R178_E2.3101.00
6_H50_E2.2911.00
30_I487_I2.2581.00
132_F137_V2.2511.00
346_N374_R2.2391.00
500_G509_Q2.2291.00
358_H481_E2.2291.00
53_L497_V2.2141.00
172_V180_T2.1471.00
138_L147_I2.1141.00
472_E486_K2.1081.00
21_E36_Y2.0831.00
7_G52_S2.0821.00
401_G404_R2.0801.00
463_V503_F2.0541.00
35_S38_R2.0491.00
349_E377_R2.0131.00
211_I250_P2.0001.00
373_E417_K1.9971.00
14_L488_A1.9961.00
297_K368_D1.9791.00
8_G53_L1.9661.00
412_K465_E1.9601.00
92_Q96_E1.9581.00
492_D521_N1.9501.00
495_F519_V1.9491.00
439_Q511_H1.9441.00
333_V348_I1.9281.00
500_G513_L1.9241.00
59_F498_L1.9071.00
321_I331_V1.8641.00
215_W250_P1.8631.00
499_S514_E1.8541.00
10_I23_V1.8491.00
59_F496_T1.8471.00
480_K484_R1.8441.00
4_I24_Y1.8241.00
199_S202_Y1.7991.00
61_G220_T1.7941.00
295_L339_L1.7831.00
26_E31_K1.7811.00
171_I179_P1.7721.00
358_H476_G1.7641.00
325_R359_D1.7641.00
104_N135_R1.7601.00
86_S89_S1.7581.00
314_D343_K1.7581.00
58_M497_V1.7521.00
109_G139_L1.7501.00
9_F501_D1.7401.00
342_E371_L1.7391.00
214_C432_V1.7321.00
299_P307_N1.7321.00
352_P356_G1.7311.00
423_G469_L1.7201.00
299_P305_S1.7181.00
501_D504_A1.7171.00
97_R101_L1.7051.00
14_L18_D1.6981.00
375_A382_L1.6901.00
25_V495_F1.6901.00
85_T89_S1.6691.00
211_I215_W1.6581.00
335_A361_L1.6581.00
133_P137_V1.6531.00
200_Q242_K1.6521.00
14_L17_G1.6241.00
345_L380_I1.6191.00
322_R326_E1.6181.00
23_V58_M1.6021.00
174_D178_E1.5971.00
154_L183_L1.5941.00
121_D127_D1.5901.00
29_V483_S1.5891.00
147_I188_Q1.5851.00
28_G521_N1.5791.00
72_H427_A1.5751.00
125_K151_S1.5751.00
420_L473_G1.5581.00
84_L93_A1.5521.00
250_P523_Q1.5471.00
23_V495_F1.5391.00
24_Y48_T1.5331.00
149_V153_A1.5281.00
172_V184_F1.5261.00
468_K472_E1.5221.00
313_D316_T1.5211.00
95_K99_R1.5201.00
63_V221_G1.5201.00
213_D216_T1.5161.00
372_I417_K1.5081.00
62_F435_L1.4961.00
5_W519_V1.4911.00
21_E35_S1.4901.00
5_W495_F1.4881.00
151_S155_Q1.4761.00
174_D180_T1.4761.00
217_K433_D1.4671.00
160_S163_T1.4601.00
509_Q512_L1.4601.00
244_A273_G1.4551.00
303_D306_T1.4461.00
87_K121_D1.4421.00
125_K178_E1.4411.00
88_D92_Q1.4391.00
165_D170_V1.4381.00
506_D509_Q1.4371.00
314_D318_G1.4361.00
373_E377_R1.4331.00
24_Y31_K1.4331.00
425_S437_G1.4321.00
415_I465_E1.4291.00
330_E479_Y1.4231.00
84_L90_I1.4221.00
53_L58_M1.4141.00
351_H356_G1.4131.00
91_L130_R1.4091.00
476_G481_E1.4071.00
98_E135_R1.3841.00
439_Q443_L1.3821.00
502_P510_L1.3761.00
83_A93_A1.3691.00
59_F62_F1.3641.00
63_V474_S1.3621.00
96_E99_R1.3521.00
161_R179_P1.3511.00
96_E100_Q1.3511.00
65_S422_A1.3511.00
454_S460_C1.3511.00
472_E491_Y1.3491.00
11_Y503_F1.3451.00
32_G38_R1.3431.00
4_I39_L1.3391.00
296_L366_V1.3301.00
502_P513_L1.3231.00
256_L280_A1.3201.00
166_P169_G1.3091.00
285_A344_V1.3081.00
23_V30_I1.3001.00
435_L498_L1.3001.00
183_L191_I1.2921.00
57_V502_P1.2921.00
98_E107_L1.2921.00
381_A476_G1.2921.00
487_I495_F1.2911.00
5_W25_V1.2871.00
221_G484_R1.2841.00
87_K91_L1.2831.00
335_A341_F1.2801.00
6_H36_Y1.2801.00
369_N410_A1.2771.00
352_P355_N1.2731.00
464_Y503_F1.2701.00
5_W51_I1.2501.00
241_E245_A1.2501.00
7_G55_G1.2481.00
255_L276_V1.2451.00
420_L476_G1.2441.00
94_A139_L1.2421.00
342_E368_D1.2321.00
45_S48_T1.2231.00
345_L375_A1.2231.00
333_V344_V1.2211.00
442_V463_V1.2151.00
422_A477_I1.2141.00
87_K127_D1.2131.00
124_T127_D1.2121.00
451_N454_S1.2021.00
468_K473_G1.1921.00
285_A333_V1.1881.00
5_W8_G1.1871.00
318_G347_A1.1871.00
463_V507_P1.1841.00
204_D246_G1.1831.00
414_L419_I1.1801.00
323_K327_K1.1731.00
171_I183_L1.1721.00
445_K508_A1.1721.00
423_G441_A1.1701.00
33_T489_E1.1661.00
73_G210_A1.1631.00
341_F367_L1.1611.00
381_A477_I1.1581.00
213_D217_K1.1561.00
242_K246_G1.1451.00
24_Y39_L1.1401.00
33_T487_I1.1371.00
98_E131_L1.1321.00
32_G489_E1.1321.00
9_F19_R1.1301.00
159_I163_T1.1281.00
351_H354_K1.1271.00
89_S92_Q1.1251.00
461_L465_E1.1231.00
22_A34_G1.1211.00
163_T166_P1.1201.00
28_G492_D1.1171.00
252_R494_D1.1161.00
342_E346_N1.1151.00
223_H478_I1.1131.00
368_D371_L1.1131.00
36_Y40_K1.1121.00
74_E206_A1.1121.00
349_E378_M1.1111.00
217_K432_V1.1101.00
484_R492_D1.1101.00
24_Y32_G1.1060.99
367_L414_L1.1050.99
375_A419_I1.1040.99
174_D177_G1.1020.99
94_A132_F1.0960.99
12_T20_T1.0880.99
339_L343_K1.0820.99
435_L496_T1.0790.99
58_M495_F1.0780.99
101_L135_R1.0780.99
415_I461_L1.0780.99
252_R521_N1.0770.99
275_Y520_I1.0750.99
505_I513_L1.0660.99
67_L214_C1.0620.99
382_L419_I1.0590.99
204_D243_A1.0570.99
264_R267_Q1.0550.99
362_I383_D1.0540.99
125_K154_L1.0540.99
136_P150_N1.0530.99
483_S492_D1.0530.99
102_P135_R1.0500.99
23_V519_V1.0450.99
225_E362_I1.0430.99
149_V157_A1.0420.99
63_V484_R1.0420.99
15_E18_D1.0410.99
423_G461_L1.0400.99
8_G58_M1.0380.99
435_L515_I1.0370.99
6_H40_K1.0350.99
40_K50_E1.0310.99
467_I502_P1.0300.99
211_I251_F1.0210.99
10_I58_M1.0210.99
93_A96_E1.0190.99
443_L507_P1.0190.99
344_V348_I1.0170.99
34_G39_L1.0170.99
9_F57_V1.0150.99
77_L209_A1.0130.99
91_L127_D1.0110.99
125_K129_D1.0060.99
145_H185_D1.0060.99
10_I20_T1.0030.99
29_V492_D0.9990.99
5_W58_M0.9990.99
129_D150_N0.9970.99
134_D150_N0.9940.99
316_T319_R0.9860.99
416_S465_E0.9850.99
438_I463_V0.9830.99
101_L104_N0.9810.99
105_D135_R0.9790.99
138_L149_V0.9760.99
11_Y57_V0.9710.99
166_P173_K0.9640.99
103_K135_R0.9590.99
31_K489_E0.9580.99
24_Y45_S0.9580.99
302_D399_R0.9570.99
318_G322_R0.9530.98
435_L438_I0.9480.98
126_H130_R0.9470.98
221_G478_I0.9460.98
292_R302_D0.9450.98
364_A375_A0.9400.98
412_K415_I0.9390.98
358_H479_Y0.9390.98
469_L473_G0.9390.98
345_L374_R0.9370.98
499_S513_L0.9360.98
43_Y48_T0.9360.98
296_L400_L0.9350.98
422_A473_G0.9340.98
112_W122_Y0.9340.98
332_A360_R0.9340.98
89_S93_A0.9270.98
383_D388_F0.9250.98
76_Q213_D0.9240.98
322_R354_K0.9230.98
385_Q424_G0.9220.98
323_K326_E0.9180.98
65_S474_S0.9160.98
480_K483_S0.9120.98
324_A331_V0.9120.98
14_L20_T0.9110.98
297_K339_L0.9100.98
325_R357_R0.9080.98
295_L343_K0.9070.98
463_V505_I0.9060.98
106_W153_A0.9050.98
24_Y43_Y0.9040.98
386_P423_G0.9040.98
319_R323_K0.9010.98
262_V265_W0.9000.98
275_Y521_N0.8980.98
172_V179_P0.8970.98
496_T515_I0.8950.98
364_A367_L0.8940.98
520_I525_V0.8910.98
13_M467_I0.8900.98
281_M324_A0.8850.98
397_I402_K0.8830.98
171_I190_L0.8830.98
126_H178_E0.8800.97
438_I470_Y0.8790.97
101_L107_L0.8760.97
275_Y523_Q0.8760.97
344_V361_L0.8750.97
497_V517_K0.8740.97
149_V183_L0.8740.97
285_A340_A0.8730.97
136_P153_A0.8720.97
97_R100_Q0.8710.97
369_N407_T0.8690.97
437_G470_Y0.8670.97
13_M464_Y0.8660.97
384_L411_W0.8640.97
203_V236_P0.8630.97
92_Q95_K0.8630.97
433_D436_L0.8610.97
288_A291_G0.8580.97
19_R503_F0.8580.97
498_L502_P0.8580.97
384_L414_L0.8570.97
212_K250_P0.8550.97
62_F219_L0.8490.97
91_L131_L0.8470.97
463_V502_P0.8460.97
163_T171_I0.8420.97
222_G253_C0.8390.97
413_T417_K0.8380.97
314_D346_N0.8380.97
59_F467_I0.8350.97
367_L375_A0.8350.97
225_E256_L0.8340.96
397_I405_M0.8330.96
76_Q209_A0.8280.96
456_N459_E0.8260.96
88_D91_L0.8260.96
81_L109_G0.8260.96
8_G55_G0.8250.96
5_W23_V0.8250.96
499_S516_K0.8240.96
132_F135_R0.8240.96
25_V519_V0.8240.96
372_I414_L0.8210.96
242_K245_A0.8190.96
21_E34_G0.8180.96
321_I347_A0.8180.96
383_D424_G0.8170.96
216_T526_Y0.8160.96
332_A362_I0.8160.96
63_V478_I0.8140.96
143_C146_A0.8110.96
98_E132_F0.8110.96
172_V182_L0.8080.96
310_Q343_K0.8070.96
13_M486_K0.8070.96
288_A293_T0.8030.96
457_E460_C0.8020.96
238_K242_K0.8020.96
127_D130_R0.8000.96
282_K286_D0.7970.95
141_R290_G0.7970.95
22_A39_L0.7970.95
454_S457_E0.7960.95
209_A212_K0.7960.95
166_P171_I0.7960.95
351_H355_N0.7960.95
307_N339_L0.7950.95
168_G186_K0.7940.95
295_L307_N0.7930.95
298_E404_R0.7900.95
364_A382_L0.7870.95
7_G53_L0.7870.95
200_Q204_D0.7860.95
412_K459_E0.7860.95
156_A194_A0.7850.95
365_Q409_F0.7790.95
500_G505_I0.7780.95
263_D266_E0.7770.95
59_F502_P0.7770.95
157_A191_I0.7760.95
73_G209_A0.7760.95
95_K130_R0.7760.95
208_T211_I0.7750.95
91_L94_A0.7740.95
261_A264_R0.7730.95
222_G251_F0.7710.95
75_K144_R0.7700.95
318_G343_K0.7700.95
79_L97_R0.7680.94
114_E141_R0.7670.94
215_W251_F0.7670.94
365_Q392_D0.7660.94
461_L466_A0.7660.94
211_I249_Y0.7660.94
343_K346_N0.7640.94
91_L124_T0.7620.94
103_K134_D0.7620.94
375_A380_I0.7610.94
416_S459_E0.7610.94
391_S430_E0.7590.94
498_L515_I0.7590.94
133_P152_A0.7550.94
112_W139_L0.7540.94
376_A417_K0.7540.94
215_W520_I0.7510.94
39_L43_Y0.7510.94
265_W268_L0.7510.94
252_R520_I0.7500.94
403_D406_K0.7500.94
110_E144_R0.7490.94
38_R41_E0.7480.94
498_L513_L0.7470.94
131_L137_V0.7460.94
77_L205_E0.7450.94
132_F150_N0.7450.94
421_C461_L0.7430.93
461_L469_L0.7420.93
105_D202_Y0.7420.93
204_D208_T0.7410.93
264_R268_L0.7400.93
145_H334_H0.7390.93
366_V400_L0.7380.93
400_L404_R0.7370.93
365_Q388_F0.7350.93
18_D488_A0.7340.93
505_I510_L0.7340.93
239_A243_A0.7330.93
376_A419_I0.7290.93
149_V154_L0.7250.93
262_V266_E0.7240.93
347_A350_K0.7200.92
72_H213_D0.7190.92
146_A288_A0.7180.92
36_Y39_L0.7180.92
422_A474_S0.7160.92
143_C291_G0.7160.92
225_E332_A0.7160.92
202_Y205_E0.7140.92
367_L410_A0.7130.92
338_D404_R0.7100.92
346_N349_E0.7100.92
97_R135_R0.7080.92
163_T173_K0.7050.92
285_A317_L0.7050.92
101_L105_D0.7050.92
478_I484_R0.7030.91
154_L159_I0.7030.91
342_E374_R0.7020.91
330_E359_D0.7000.91
34_G37_E0.7000.91
406_K458_S0.7000.91
126_H151_S0.6990.91
441_A466_A0.6990.91
289_L365_Q0.6980.91
208_T212_K0.6950.91
270_K273_G0.6950.91
56_A499_S0.6940.91
9_F504_A0.6940.91
154_L179_P0.6930.91
51_I517_K0.6910.91
415_I421_C0.6900.91
219_L434_P0.6880.91
294_A300_Y0.6870.90
494_D521_N0.6860.90
299_P404_R0.6850.90
439_Q508_A0.6820.90
12_T18_D0.6810.90
362_I388_F0.6810.90
223_H360_R0.6800.90
292_R399_R0.6790.90
283_I320_L0.6790.90
211_I243_A0.6780.90
200_Q239_A0.6780.90
369_N413_T0.6780.90
407_T413_T0.6770.90
381_A422_A0.6760.90
277_E480_K0.6730.90
107_L135_R0.6730.90
434_P438_I0.6730.90
243_A248_K0.6720.89
254_H279_G0.6720.89
510_L513_L0.6710.89
286_D337_G0.6690.89
252_R492_D0.6690.89
77_L206_A0.6680.89
146_A291_G0.6680.89
392_D409_F0.6680.89
336_I365_Q0.6670.89
18_D468_K0.6650.89
250_P525_V0.6640.89
157_A194_A0.6630.89
411_W421_C0.6610.89
235_V238_K0.6600.89
341_F364_A0.6600.89
88_D118_E0.6570.88
476_G479_Y0.6570.88
294_A336_I0.6540.88
207_L239_A0.6540.88
283_I317_L0.6520.88
336_I385_Q0.6500.88
435_L513_L0.6500.88
361_L375_A0.6500.88
274_P483_S0.6470.88
407_T410_A0.6450.88
465_E468_K0.6440.87
228_S236_P0.6440.87
220_T494_D0.6430.87
128_L132_F0.6410.87
352_P357_R0.6390.87
7_G54_N0.6390.87
185_D282_K0.6380.87
314_D347_A0.6370.87
376_A418_G0.6370.87
23_V524_I0.6370.87
128_L137_V0.6340.87
386_P437_G0.6330.87
256_L332_A0.6300.86
13_M17_G0.6290.86
410_A413_T0.6290.86
296_L404_R0.6280.86
143_C388_F0.6270.86
301_Q404_R0.6260.86
78_Q108_I0.6250.86
71_G144_R0.6230.86
258_H261_A0.6220.86
200_Q238_K0.6220.86
467_I503_F0.6210.85
13_M472_E0.6190.85
90_I148_A0.6180.85
173_K179_P0.6170.85
307_N310_Q0.6170.85
22_A37_E0.6170.85
13_M18_D0.6170.85
263_D267_Q0.6160.85
284_F340_A0.6160.85
59_F438_I0.6150.85
30_I33_T0.6150.85
360_R383_D0.6140.85
334_H426_D0.6140.85
136_P156_A0.6120.85
495_F524_I0.6120.85
367_L372_I0.6110.85
374_R378_M0.6110.85
375_A414_L0.6100.84
385_Q388_F0.6090.84
331_V359_D0.6080.84
94_A109_G0.6060.84
332_A388_F0.6050.84
165_D169_G0.6040.84
200_Q235_V0.6020.84
401_G405_M0.5990.83
217_K431_P0.5990.83
212_K215_W0.5980.83
341_F361_L0.5980.83
341_F371_L0.5960.83
208_T243_A0.5950.83
88_D130_R0.5950.83
146_A182_L0.5940.83
521_N524_I0.5940.83
442_V510_L0.5920.83
381_A420_L0.5920.83
105_D156_A0.5920.83
149_V191_I0.5910.83
415_I473_G0.5890.82
285_A343_K0.5890.82
216_T514_E0.5890.82
204_D239_A0.5880.82
98_E101_L0.5870.82
452_G455_Y0.5870.82
141_R388_F0.5860.82
262_V268_L0.5850.82
252_R256_L0.5850.82
224_S227_L0.5840.82
65_S477_I0.5820.82
4_I36_Y0.5820.82
317_L347_A0.5800.81
10_I487_I0.5790.81
335_A344_V0.5790.81
507_P510_L0.5790.81
375_A378_M0.5780.81
140_K192_L0.5780.81
290_G336_I0.5780.81
438_I467_I0.5770.81
282_K287_G0.5770.81
387_H437_G0.5770.81
87_K90_I0.5770.81
322_R351_H0.5750.81
72_H432_V0.5750.81
134_D152_A0.5750.81
315_E319_R0.5750.81
244_A275_Y0.5750.81
146_A184_F0.5750.81
287_G337_G0.5720.81
128_L133_P0.5720.81
423_G470_Y0.5710.80
439_Q445_K0.5710.80
365_Q396_V0.5690.80
290_G388_F0.5690.80
212_K216_T0.5680.80
436_L511_H0.5680.80
102_P105_D0.5670.80
24_Y34_G0.5670.80
169_G173_K0.5670.80
290_G409_F0.5660.80
205_E208_T0.5660.80
22_A35_S0.5650.80
269_E272_S0.5650.80
113_N395_W0.5650.80
341_F375_A0.5640.80
345_L349_E0.5640.80
23_V517_K0.5630.79
292_R303_D0.5630.79
79_L93_A0.5630.79
94_A128_L0.5620.79
289_L336_I0.5620.79
221_G254_H0.5600.79
141_R146_A0.5600.79
360_R477_I0.5600.79
317_L333_V0.5590.79
297_K371_L0.5580.79
141_R148_A0.5570.79
392_D396_V0.5560.79
394_P451_N0.5560.79
325_R355_N0.5560.79
290_G392_D0.5550.79
256_L329_M0.5550.79
463_V504_A0.5530.78
297_K338_D0.5520.78
384_L421_C0.5520.78
205_E209_A0.5510.78
374_R377_R0.5510.78
225_E360_R0.5500.78
286_D340_A0.5490.78
109_G137_V0.5490.78
189_D192_L0.5470.78
335_A340_A0.5470.78
336_I409_F0.5460.77
517_K521_N0.5450.77
4_I45_S0.5450.77
290_G365_Q0.5450.77
473_G476_G0.5450.77
225_E280_A0.5440.77
471_T485_G0.5440.77
330_E358_H0.5440.77
372_I410_A0.5430.77
114_E292_R0.5420.77
57_V501_D0.5410.77
23_V33_T0.5410.77
280_A332_A0.5410.77
306_T309_V0.5410.77
343_K347_A0.5400.77
301_Q401_G0.5400.77
299_P306_T0.5380.76
106_W196_P0.5370.76
40_K43_Y0.5360.76
402_K406_K0.5350.76
266_E323_K0.5340.76
56_A517_K0.5340.76
289_L366_V0.5340.76
80_D83_A0.5330.76
11_Y464_Y0.5330.76
445_K451_N0.5330.76
97_R107_L0.5330.76
143_C392_D0.5330.76
123_L127_D0.5330.76
411_W423_G0.5330.76
287_G293_T0.5320.76
334_H363_H0.5310.75
436_L439_Q0.5290.75
30_I58_M0.5290.75
15_E468_K0.5280.75
69_L210_A0.5280.75
387_H390_A0.5280.75
21_E39_L0.5270.75
287_G294_A0.5270.75
68_H363_H0.5260.75
71_G110_E0.5260.75
97_R104_N0.5250.75
263_D323_K0.5240.74
63_V223_H0.5240.74
177_G180_T0.5230.74
126_H174_D0.5230.74
495_F517_K0.5210.74
518_T526_Y0.5210.74
254_H478_I0.5200.74
13_M468_K0.5200.74
57_V513_L0.5190.74
145_H282_K0.5190.74
90_I117_F0.5190.74
165_D171_I0.5190.74
143_C290_G0.5190.74
282_K334_H0.5180.74
107_L137_V0.5170.73
11_Y19_R0.5170.73
431_P436_L0.5170.73
19_R488_A0.5160.73
395_W399_R0.5150.73
258_H262_V0.5150.73
357_R479_Y0.5150.73
11_Y501_D0.5140.73
8_G497_V0.5140.73
298_E368_D0.5140.73
348_I359_D0.5140.73
69_L253_C0.5140.73
37_E41_E0.5130.73
390_A440_S0.5130.73
513_L516_K0.5130.73
62_F496_T0.5120.73
185_D311_V0.5120.73
221_G474_S0.5120.73
321_I333_V0.5110.73
79_L139_L0.5110.73
211_I520_I0.5100.73
37_E40_K0.5090.72
261_A265_W0.5080.72
330_E360_R0.5060.72
175_A178_E0.5050.72
67_L427_A0.5050.72
388_F396_V0.5050.72
6_H52_S0.5030.71
364_A414_L0.5030.71
94_A107_L0.5020.71
169_G187_A0.5020.71
108_I140_K0.5020.71
272_S277_E0.5020.71
70_I207_L0.5010.71
369_N417_K0.5010.71
354_K357_R0.5000.71
443_L508_A0.5000.71
185_D288_A0.5000.71
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3icjA 1 0.8752 100 0.367 Contact Map
2bb0A 2 0.7448 100 0.635 Contact Map
4gbdA 2 0.7183 100 0.636 Contact Map
3lnpA 2 0.7316 100 0.641 Contact Map
4v1xA 5 0.7467 100 0.644 Contact Map
4dzhA 2 0.7202 100 0.648 Contact Map
4f0rA 2 0.7259 100 0.649 Contact Map
2p9bA 1 0.6597 100 0.65 Contact Map
2q09A 2 0.7391 100 0.652 Contact Map
3hpaA 2 0.7146 100 0.658 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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