YTRP - BACSU - GREMLIN Contacts

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YTRP - Uncharacterized protein YtrP

UniProt:	O34325	Sequences: MVEQTKDQLSAFHYHMLDFLLTKSEKVTFTDSFIWLTSAIQTYFSTLCVSLTPSPSDFVTKLADGEARFSASKINASCYLIEDGSGRRFHLACRQDEEIPEGLPDVVASFLNQSMKQERLYNKTIYQKKIYKMTELFHSLLDQTDVLKQLLESLTSTFSLFEFSLFISHDQDQCLGIPAKELYMEGEKSDSFALKVYLSGDILRKNESVAYIPIKGQQGTYGVLKAEGTGDSFLTDACLDEMSLLANAAGKAFENAQLYEQSKASIANLELINETSRRLNQRLTLTDTMNDLAVRMAESFQAEEVGFFHIDHFENLTLLPGSTAFFKEAKPSDFYNELKEKLYEGEKGVFIGNGQSVFGKAGYGSLMAAPMIQNDRLLGFAVLLKQELYAFTFEMYKLFQALIHHATLAVTNSMLRDRLEHLVKTDQLTELYSRAYLDEKIQYSMKIHQKGVFILVDIDNFKNVNDTYGHQTGDEILIQVASVIKSNIRKHDVGARWGGEELAIYLPNVPVAVGKRITERLVYAVRKNTKPEVTISCGISCWTTETKKSLKELVHEADEALYSAKRSGKNRLMIHDSIK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	579 (463)
Sequences:	794 (721)
Seq/√Len:	33.5

ECOLI - YEGE YEDQ YDAM
BACSU - YTRP

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
489_R	492_D	8.268	1.00
454_I	537_C	5.813	1.00
460_N	569_K	5.346	1.00
470_H	558_D	3.835	1.00
519_E	522_V	3.812	1.00
466_D	470_H	3.782	1.00
452_V	541_C	3.640	1.00
488_I	494_G	3.478	1.00
456_V	504_I	3.447	1.00
543_T	547_K	3.418	1.00
446_K	489_R	3.310	1.00
462_K	466_D	3.190	1.00
454_I	518_T	3.128	1.00
459_D	536_S	3.100	1.00
421_H	425_T	3.093	1.00
534_T	570_N	3.092	1.00
466_D	558_D	2.992	1.00
412_N	416_R	2.967	1.00
470_H	562_Y	2.949	1.00
499_G	562_Y	2.918	1.00
500_E	534_T	2.907	1.00
558_D	562_Y	2.813	1.00
418_R	422_L	2.747	1.00
499_G	558_D	2.744	1.00
462_K	562_Y	2.610	1.00
506_L	517_I	2.609	1.00
510_P	513_V	2.598	1.00
564_A	573_M	2.581	1.00
452_V	514_G	2.566	1.00
514_G	518_T	2.506	1.00
522_V	572_L	2.498	1.00
498_G	558_D	2.465	1.00
432_Y	436_Y	2.455	1.00
462_K	470_H	2.441	1.00
539_I	572_L	2.356	0.99
453_F	504_I	2.343	0.99
459_D	568_G	2.310	0.99
500_E	561_L	2.279	0.99
470_H	499_G	2.254	0.99
455_L	561_L	2.254	0.99
458_I	561_L	2.198	0.99
458_I	500_E	2.162	0.99
130_I	252_A	2.157	0.99
489_R	520_R	2.152	0.99
457_D	565_K	2.125	0.99
370_P	379_G	2.068	0.98
466_D	562_Y	2.047	0.98
536_S	568_G	2.011	0.98
501_E	558_D	1.999	0.98
222_G	246_A	1.991	0.98
464_V	475_E	1.979	0.98
415_L	419_L	1.965	0.98
547_K	556_E	1.956	0.98
525_V	535_I	1.953	0.98
409_A	413_S	1.939	0.97
436_Y	493_V	1.911	0.97
549_S	552_E	1.895	0.97
413_S	416_R	1.857	0.97
457_D	462_K	1.856	0.97
489_R	517_I	1.855	0.97
316_L	320_P	1.854	0.97
462_K	499_G	1.847	0.97
437_L	503_A	1.822	0.96
433_S	502_L	1.814	0.96
476_I	561_L	1.802	0.96
460_N	500_E	1.762	0.96
501_E	562_Y	1.750	0.95
462_K	558_D	1.722	0.95
142_D	145_D	1.706	0.95
509_V	513_V	1.691	0.94
461_F	477_L	1.684	0.94
492_D	520_R	1.678	0.94
409_A	412_N	1.673	0.94
320_P	323_T	1.670	0.94
564_A	568_G	1.664	0.94
497_W	554_V	1.660	0.94
462_K	465_N	1.651	0.94
256_A	259_Y	1.638	0.93
457_D	499_G	1.602	0.93
543_T	556_E	1.597	0.92
457_D	466_D	1.594	0.92
195_K	198_L	1.588	0.92
476_I	500_E	1.572	0.92
476_I	533_V	1.547	0.91
408_L	413_S	1.543	0.91
437_L	495_A	1.521	0.91
457_D	562_Y	1.507	0.90
518_T	537_C	1.503	0.90
320_P	324_A	1.502	0.90
498_G	501_E	1.495	0.90
412_N	569_K	1.468	0.89
441_I	550_L	1.462	0.89
497_W	500_E	1.448	0.88
293_A	296_M	1.438	0.88
466_D	499_G	1.434	0.88
560_A	564_A	1.429	0.88
465_N	473_G	1.428	0.87
321_G	324_A	1.425	0.87
151_L	163_F	1.411	0.87
418_R	421_H	1.410	0.87
425_T	476_I	1.393	0.86
258_L	262_S	1.392	0.86
518_T	539_I	1.388	0.86
526_R	570_N	1.381	0.86
488_I	520_R	1.378	0.86
499_G	565_K	1.363	0.85
425_T	561_L	1.351	0.84
522_V	537_C	1.343	0.84
534_T	568_G	1.343	0.84
456_V	535_I	1.341	0.84
269_L	272_I	1.329	0.83
340_E	343_Y	1.327	0.83
162_E	227_E	1.322	0.83
474_D	499_G	1.321	0.83
547_K	553_L	1.312	0.83
534_T	561_L	1.307	0.82
141_L	258_L	1.303	0.82
470_H	474_D	1.300	0.82
500_E	570_N	1.281	0.81
337_E	340_E	1.276	0.81
466_D	489_R	1.273	0.81
439_E	493_V	1.271	0.80
449_Q	508_N	1.270	0.80
437_L	441_I	1.268	0.80
440_K	493_V	1.266	0.80
473_G	498_G	1.266	0.80
468_Y	500_E	1.255	0.80
320_P	408_L	1.253	0.80
500_E	569_K	1.251	0.79
459_D	499_G	1.250	0.79
465_N	474_D	1.245	0.79
436_Y	440_K	1.237	0.79
431_L	476_I	1.237	0.79
459_D	558_D	1.235	0.79
416_R	419_L	1.220	0.78
458_I	535_I	1.219	0.78
536_S	558_D	1.217	0.77
440_K	443_Y	1.217	0.77
367_M	379_G	1.205	0.77
500_E	525_V	1.193	0.76
522_V	570_N	1.179	0.75
408_L	416_R	1.178	0.75
542_W	547_K	1.175	0.75
424_K	436_Y	1.173	0.75
185_E	188_K	1.168	0.74
154_L	163_F	1.168	0.74
462_K	474_D	1.166	0.74
425_T	436_Y	1.160	0.74
461_F	560_A	1.154	0.74
381_A	406_A	1.153	0.74
266_I	269_L	1.151	0.73
432_Y	493_V	1.148	0.73
244_L	248_A	1.147	0.73
455_L	500_E	1.145	0.73
113_Q	117_Q	1.143	0.73
425_T	432_Y	1.142	0.73
176_G	182_L	1.135	0.72
252_A	255_N	1.134	0.72
465_N	499_G	1.130	0.72
500_E	522_V	1.120	0.71
468_Y	522_V	1.116	0.71
473_G	499_G	1.116	0.71
112_N	115_M	1.114	0.71
323_T	327_K	1.112	0.71
168_S	171_Q	1.112	0.71
379_G	407_T	1.108	0.70
465_N	470_H	1.108	0.70
127_Q	130_I	1.108	0.70
214_I	221_Y	1.107	0.70
489_R	506_L	1.107	0.70
176_G	180_K	1.107	0.70
487_N	521_L	1.106	0.70
151_L	227_E	1.095	0.70
446_K	491_H	1.094	0.69
255_N	258_L	1.092	0.69
434_R	558_D	1.088	0.69
133_M	150_L	1.087	0.69
251_K	255_N	1.084	0.69
558_D	565_K	1.082	0.69
434_R	501_E	1.080	0.68
464_V	508_N	1.078	0.68
459_D	570_N	1.071	0.68
441_I	506_L	1.070	0.68
452_V	509_V	1.069	0.68
498_G	562_Y	1.064	0.67
320_P	410_V	1.061	0.67
293_A	305_V	1.060	0.67
409_A	416_R	1.055	0.67
343_Y	480_V	1.050	0.66
457_D	558_D	1.048	0.66
478_I	482_S	1.048	0.66
426_D	496_R	1.041	0.66
458_I	477_L	1.039	0.65
224_L	234_L	1.038	0.65
143_Q	253_F	1.037	0.65
403_I	407_T	1.036	0.65
434_R	474_D	1.035	0.65
438_D	495_A	1.035	0.65
371_M	379_G	1.033	0.65
500_E	558_D	1.029	0.65
208_S	228_G	1.027	0.65
436_Y	439_E	1.024	0.64
431_L	497_W	1.023	0.64
444_S	493_V	1.022	0.64
166_F	227_E	1.017	0.64
489_R	558_D	1.016	0.64
500_E	518_T	1.015	0.64
501_E	536_S	1.009	0.63
208_S	234_L	1.007	0.63
405_H	408_L	1.007	0.63
474_D	558_D	1.004	0.63
458_I	480_V	1.002	0.63
318_L	322_S	0.988	0.61
271_L	275_T	0.988	0.61
245_L	420_E	0.986	0.61
459_D	534_T	0.983	0.61
415_L	422_L	0.983	0.61
563_S	573_M	0.978	0.61
130_I	184_M	0.977	0.61
519_E	523_Y	0.974	0.60
462_K	501_E	0.971	0.60
564_A	571_R	0.969	0.60
522_V	534_T	0.968	0.60
542_W	553_L	0.966	0.60
535_I	561_L	0.965	0.60
476_I	483_V	0.964	0.60
435_A	464_V	0.963	0.59
195_K	203_L	0.962	0.59
458_I	534_T	0.961	0.59
545_E	574_I	0.961	0.59
379_G	410_V	0.957	0.59
517_I	520_R	0.955	0.59
538_G	557_A	0.950	0.58
447_I	521_L	0.950	0.58
431_L	560_A	0.949	0.58
452_V	507_P	0.947	0.58
162_E	205_K	0.946	0.58
500_E	507_P	0.944	0.58
337_E	341_K	0.940	0.58
462_K	473_G	0.938	0.57
379_G	403_I	0.936	0.57
434_R	462_K	0.934	0.57
293_A	300_F	0.929	0.57
309_H	379_G	0.928	0.57
351_I	355_Q	0.927	0.57
444_S	500_E	0.925	0.56
518_T	572_L	0.925	0.56
436_Y	509_V	0.925	0.56
483_V	572_L	0.924	0.56
470_H	501_E	0.920	0.56
130_I	134_T	0.918	0.56
479_Q	483_V	0.915	0.56
506_L	537_C	0.909	0.55
259_Y	262_S	0.909	0.55
457_D	470_H	0.907	0.55
464_V	531_P	0.906	0.55
427_Q	505_Y	0.905	0.55
418_R	534_T	0.901	0.54
283_L	286_T	0.900	0.54
322_S	325_F	0.900	0.54
130_I	255_N	0.896	0.54
527_K	571_R	0.895	0.54
458_I	464_V	0.894	0.54
459_D	565_K	0.894	0.54
462_K	565_K	0.890	0.53
483_V	531_P	0.885	0.53
219_G	525_V	0.878	0.52
197_Y	200_G	0.878	0.52
321_G	325_F	0.877	0.52
377_L	380_F	0.874	0.52
147_L	157_T	0.874	0.52
496_R	501_E	0.872	0.52
265_S	269_L	0.871	0.52
422_L	555_H	0.869	0.52
506_L	514_G	0.869	0.52
151_L	158_F	0.867	0.52
316_L	323_T	0.867	0.52
435_A	570_N	0.864	0.51
389_Y	505_Y	0.863	0.51
455_L	503_A	0.862	0.51
146_V	159_S	0.861	0.51
500_E	568_G	0.860	0.51
466_D	565_K	0.854	0.50
431_L	458_I	0.853	0.50
404_H	409_A	0.852	0.50
367_M	370_P	0.851	0.50
470_H	569_K	0.850	0.50
195_K	200_G	0.849	0.50
329_A	333_D	0.849	0.50
466_D	474_D	0.848	0.50
184_M	210_A	0.848	0.50
523_Y	526_R	0.847	0.50
296_M	305_V	0.847	0.50
446_K	492_D	0.847	0.50
567_S	571_R	0.846	0.50
424_K	432_Y	0.846	0.50
368_A	383_L	0.843	0.50
263_K	266_I	0.842	0.49
216_G	254_E	0.840	0.49
342_L	345_G	0.840	0.49
431_L	483_V	0.840	0.49
218_Q	561_L	0.839	0.49
536_S	560_A	0.837	0.49
275_T	279_L	0.836	0.49
183_Y	187_E	0.835	0.49
262_S	265_S	0.834	0.49
263_K	274_E	0.833	0.49
460_N	561_L	0.832	0.49
238_C	245_L	0.831	0.49
182_L	185_E	0.829	0.48
272_I	284_T	0.828	0.48
294_V	437_L	0.827	0.48
140_L	238_C	0.826	0.48
293_A	297_A	0.826	0.48
426_D	538_G	0.826	0.48
465_N	565_K	0.825	0.48
288_T	293_A	0.824	0.48
434_R	461_F	0.822	0.48
428_L	462_K	0.822	0.48
317_T	320_P	0.821	0.48
432_Y	483_V	0.816	0.47
451_G	507_P	0.815	0.47
184_M	187_E	0.814	0.47
197_Y	201_D	0.814	0.47
457_D	465_N	0.814	0.47
451_G	531_P	0.814	0.47
500_E	574_I	0.813	0.47
162_E	166_F	0.810	0.47
417_D	505_Y	0.809	0.47
129_K	143_Q	0.809	0.47
196_V	200_G	0.808	0.47
465_N	562_Y	0.807	0.46
134_T	151_L	0.805	0.46
543_T	553_L	0.804	0.46
194_L	200_G	0.803	0.46
370_P	409_A	0.803	0.46
533_V	561_L	0.802	0.46
210_A	238_C	0.801	0.46
143_Q	164_S	0.800	0.46
368_A	382_V	0.798	0.46
441_I	505_Y	0.798	0.46
305_V	407_T	0.798	0.46
275_T	278_R	0.798	0.46
476_I	535_I	0.797	0.46
428_L	434_R	0.797	0.46
419_L	568_G	0.795	0.45
273_N	277_R	0.795	0.45
439_E	443_Y	0.795	0.45
461_F	501_E	0.793	0.45
165_L	507_P	0.792	0.45
151_L	166_F	0.792	0.45
425_T	520_R	0.792	0.45
305_V	409_A	0.790	0.45
147_L	246_A	0.789	0.45
428_L	473_G	0.787	0.45
415_L	561_L	0.786	0.45
335_Y	342_L	0.786	0.45
464_V	476_I	0.784	0.45
504_I	507_P	0.782	0.44
458_I	562_Y	0.782	0.44
452_V	468_Y	0.781	0.44
417_D	504_I	0.781	0.44
473_G	477_L	0.780	0.44
487_N	520_R	0.780	0.44
468_Y	525_V	0.779	0.44
495_A	556_E	0.778	0.44
470_H	473_G	0.776	0.44
434_R	498_G	0.775	0.44
459_D	462_K	0.775	0.44
500_E	531_P	0.774	0.44
471_Q	554_V	0.774	0.44
140_L	150_L	0.773	0.44
210_A	234_L	0.771	0.44
444_S	453_F	0.771	0.44
542_W	545_E	0.765	0.43
452_V	476_I	0.764	0.43
444_S	509_V	0.764	0.43
211_Y	245_L	0.762	0.43
288_T	413_S	0.759	0.43
269_L	277_R	0.758	0.42
447_I	489_R	0.756	0.42
457_D	474_D	0.753	0.42
160_L	211_Y	0.753	0.42
248_A	251_K	0.753	0.42
420_E	424_K	0.752	0.42
336_N	342_L	0.751	0.42
470_H	565_K	0.742	0.41
499_G	536_S	0.741	0.41
114_S	117_Q	0.740	0.41
225_K	228_G	0.740	0.41
397_K	408_L	0.739	0.41
225_K	250_G	0.733	0.40
160_L	164_S	0.732	0.40
497_W	507_P	0.731	0.40
235_T	238_C	0.729	0.40
459_D	569_K	0.728	0.40
435_A	514_G	0.725	0.40
243_S	445_M	0.724	0.40
151_L	225_K	0.723	0.40
437_L	488_I	0.720	0.39
432_Y	455_L	0.720	0.39
224_L	240_D	0.719	0.39
460_N	572_L	0.718	0.39
461_F	564_A	0.717	0.39
280_N	283_L	0.717	0.39
281_Q	287_D	0.716	0.39
423_V	437_L	0.715	0.39
220_T	227_E	0.714	0.39
344_E	347_K	0.713	0.39
210_A	248_A	0.712	0.39
428_L	465_N	0.711	0.39
453_F	471_Q	0.710	0.39
473_G	562_Y	0.706	0.38
473_G	496_R	0.705	0.38
288_T	292_L	0.704	0.38
444_S	451_G	0.703	0.38
438_D	539_I	0.703	0.38
234_L	253_F	0.702	0.38
355_Q	504_I	0.702	0.38
488_I	492_D	0.701	0.38
514_G	550_L	0.697	0.38
371_M	539_I	0.697	0.38
214_I	569_K	0.696	0.37
273_N	279_L	0.696	0.37
412_N	415_L	0.692	0.37
441_I	453_F	0.689	0.37
151_L	165_L	0.689	0.37
515_K	574_I	0.688	0.37
143_Q	238_C	0.687	0.37
432_Y	500_E	0.686	0.37
329_A	334_F	0.686	0.37
184_M	193_A	0.684	0.37
453_F	554_V	0.682	0.36
434_R	438_D	0.682	0.36
289_M	293_A	0.681	0.36
411_T	414_M	0.681	0.36
297_A	305_V	0.681	0.36
540_S	559_E	0.681	0.36
462_K	498_G	0.680	0.36
461_F	568_G	0.680	0.36
538_G	562_Y	0.678	0.36
407_T	410_V	0.677	0.36
504_I	515_K	0.677	0.36
313_F	511_V	0.677	0.36
134_T	252_A	0.677	0.36
276_S	280_N	0.676	0.36
239_L	253_F	0.675	0.36
194_L	201_D	0.673	0.36
432_Y	476_I	0.670	0.35
466_D	569_K	0.670	0.35
330_K	333_D	0.669	0.35
483_V	500_E	0.668	0.35
431_L	543_T	0.668	0.35
243_S	247_N	0.666	0.35
428_L	498_G	0.665	0.35
370_P	408_L	0.663	0.35
446_K	513_V	0.662	0.35
147_L	222_G	0.659	0.35
461_F	474_D	0.658	0.35
279_L	282_R	0.657	0.34
286_T	289_M	0.657	0.34
128_K	450_K	0.657	0.34
187_E	190_D	0.657	0.34
392_T	553_L	0.654	0.34
464_V	555_H	0.654	0.34
496_R	538_G	0.653	0.34
141_L	256_A	0.652	0.34
572_L	575_H	0.651	0.34
416_R	420_E	0.649	0.34
397_K	404_H	0.648	0.34
522_V	568_G	0.648	0.34
462_K	538_G	0.647	0.34
255_N	259_Y	0.647	0.34
210_A	224_L	0.645	0.34
550_L	554_V	0.644	0.33
266_I	270_E	0.643	0.33
398_L	408_L	0.642	0.33
147_L	165_L	0.641	0.33
451_G	505_Y	0.641	0.33
561_L	568_G	0.640	0.33
536_S	570_N	0.640	0.33
539_I	574_I	0.640	0.33
503_A	561_L	0.640	0.33
548_K	556_E	0.639	0.33
213_P	242_M	0.639	0.33
327_K	334_F	0.639	0.33
559_E	572_L	0.638	0.33
465_N	558_D	0.638	0.33
140_L	147_L	0.637	0.33
380_F	385_K	0.636	0.33
451_G	497_W	0.635	0.33
412_N	436_Y	0.635	0.33
246_A	437_L	0.634	0.33
427_Q	435_A	0.633	0.33
136_L	155_T	0.633	0.33
414_M	418_R	0.631	0.32
208_S	211_Y	0.630	0.32
272_I	275_T	0.629	0.32
187_E	192_F	0.628	0.32
473_G	565_K	0.628	0.32
423_V	466_D	0.626	0.32
214_I	480_V	0.626	0.32
463_N	467_T	0.625	0.32
279_L	443_Y	0.625	0.32
432_Y	495_A	0.625	0.32
133_M	136_L	0.624	0.32
423_V	476_I	0.623	0.32
180_K	184_M	0.622	0.32
500_E	562_Y	0.622	0.32
331_P	334_F	0.621	0.32
278_R	282_R	0.621	0.32
531_P	540_S	0.619	0.32
452_V	492_D	0.617	0.31
540_S	566_R	0.617	0.31
542_W	556_E	0.617	0.31
248_A	437_L	0.616	0.31
411_T	494_G	0.615	0.31
426_D	469_G	0.614	0.31
434_R	470_H	0.614	0.31
292_L	406_A	0.613	0.31
438_D	554_V	0.611	0.31
501_E	504_I	0.609	0.31
412_N	503_A	0.609	0.31
426_D	477_L	0.609	0.31
132_K	156_S	0.609	0.31
183_Y	504_I	0.606	0.31
214_I	437_L	0.604	0.31
463_N	561_L	0.603	0.30
444_S	507_P	0.603	0.30
366_L	370_P	0.603	0.30
472_T	531_P	0.603	0.30
114_S	118_E	0.603	0.30
467_T	498_G	0.602	0.30
134_T	244_L	0.602	0.30
126_Y	134_T	0.602	0.30
210_A	220_T	0.601	0.30
176_G	179_A	0.600	0.30
459_D	562_Y	0.599	0.30
504_I	544_T	0.599	0.30
442_Q	506_L	0.599	0.30
276_S	288_T	0.598	0.30
245_L	249_A	0.598	0.30
303_E	453_F	0.598	0.30
176_G	183_Y	0.597	0.30
146_V	561_L	0.597	0.30
458_I	549_S	0.596	0.30
136_L	140_L	0.595	0.30
221_Y	245_L	0.595	0.30
450_K	509_V	0.593	0.30
249_A	262_S	0.592	0.30
261_Q	268_N	0.590	0.30
424_K	531_P	0.590	0.30
292_L	410_V	0.589	0.29
211_Y	227_E	0.589	0.29
164_S	227_E	0.589	0.29
150_L	284_T	0.589	0.29
134_T	248_A	0.589	0.29
455_L	497_W	0.587	0.29
214_I	289_M	0.587	0.29
521_L	537_C	0.585	0.29
368_A	384_L	0.583	0.29
425_T	460_N	0.582	0.29
187_E	194_L	0.582	0.29
310_I	333_D	0.582	0.29
425_T	500_E	0.581	0.29
470_H	538_G	0.581	0.29
310_I	535_I	0.579	0.29
146_V	251_K	0.577	0.29
411_T	419_L	0.577	0.29
279_L	390_A	0.577	0.29
534_T	569_K	0.574	0.28
458_I	463_N	0.572	0.28
147_L	258_L	0.571	0.28
206_N	554_V	0.570	0.28
214_I	223_V	0.570	0.28
447_I	493_V	0.570	0.28
127_Q	251_K	0.569	0.28
454_I	522_V	0.569	0.28
155_T	197_Y	0.568	0.28
151_L	162_E	0.567	0.28
461_F	470_H	0.567	0.28
210_A	242_M	0.567	0.28
272_I	437_L	0.567	0.28
457_D	473_G	0.567	0.28
214_I	418_R	0.567	0.28
214_I	250_G	0.566	0.28
353_N	364_G	0.565	0.28
365_S	391_F	0.564	0.28
123_K	126_Y	0.563	0.28
159_S	226_A	0.560	0.27
466_D	501_E	0.560	0.27
403_I	408_L	0.558	0.27
319_L	334_F	0.558	0.27
474_D	565_K	0.558	0.27
120_L	124_T	0.558	0.27
432_Y	440_K	0.557	0.27
209_V	223_V	0.556	0.27
419_L	566_R	0.554	0.27
538_G	558_D	0.552	0.27
135_E	153_S	0.552	0.27
293_A	304_E	0.551	0.27
370_P	383_L	0.551	0.27
262_S	266_I	0.550	0.27
132_K	270_E	0.549	0.27
498_G	507_P	0.549	0.27
340_E	344_E	0.549	0.27
223_V	248_A	0.548	0.27
455_L	458_I	0.548	0.27
306_G	326_F	0.548	0.27
220_T	255_N	0.548	0.27
507_P	534_T	0.548	0.27
474_D	496_R	0.548	0.27
113_Q	116_K	0.545	0.26
420_E	534_T	0.545	0.26
300_F	305_V	0.545	0.26
459_D	466_D	0.544	0.26
435_A	444_S	0.544	0.26
478_I	508_N	0.543	0.26
418_R	547_K	0.543	0.26
155_T	234_L	0.542	0.26
207_E	356_S	0.541	0.26
461_F	536_S	0.541	0.26
447_I	520_R	0.539	0.26
528_N	531_P	0.539	0.26
405_H	409_A	0.539	0.26
339_K	343_Y	0.538	0.26
151_L	155_T	0.537	0.26
436_Y	444_S	0.537	0.26
507_P	569_K	0.537	0.26
468_Y	476_I	0.537	0.26
155_T	159_S	0.536	0.26
260_E	346_E	0.536	0.26
313_F	510_P	0.535	0.26
240_D	249_A	0.535	0.26
469_G	538_G	0.535	0.26
238_C	246_A	0.534	0.26
279_L	285_L	0.533	0.26
460_N	531_P	0.533	0.26
476_I	531_P	0.533	0.26
126_Y	162_E	0.532	0.26
454_I	504_I	0.531	0.26
445_M	451_G	0.530	0.26
134_T	137_F	0.528	0.25
560_A	568_G	0.528	0.25
379_G	383_L	0.528	0.25
507_P	518_T	0.527	0.25
154_L	406_A	0.527	0.25
383_L	409_A	0.526	0.25
423_V	571_R	0.526	0.25
130_I	213_P	0.526	0.25
455_L	489_R	0.526	0.25
242_M	362_G	0.525	0.25
317_T	573_M	0.525	0.25
468_Y	529_T	0.524	0.25
275_T	284_T	0.523	0.25
469_G	496_R	0.522	0.25
316_L	324_A	0.522	0.25
370_P	410_V	0.522	0.25
537_C	568_G	0.521	0.25
224_L	533_V	0.521	0.25
168_S	221_Y	0.520	0.25
497_W	520_R	0.520	0.25
488_I	493_V	0.519	0.25
459_D	561_L	0.519	0.25
238_C	467_T	0.518	0.25
422_L	435_A	0.517	0.25
368_A	379_G	0.516	0.25
312_H	329_A	0.516	0.25
345_G	349_V	0.514	0.25
423_V	474_D	0.513	0.24
429_T	474_D	0.513	0.24
193_A	196_V	0.513	0.24
416_R	455_L	0.512	0.24
457_D	501_E	0.511	0.24
209_V	227_E	0.510	0.24
500_E	575_H	0.510	0.24
214_I	222_G	0.509	0.24
446_K	508_N	0.509	0.24
138_H	258_L	0.507	0.24
496_R	499_G	0.507	0.24
208_S	227_E	0.506	0.24
261_Q	265_S	0.505	0.24
468_Y	493_V	0.503	0.24
273_N	276_S	0.503	0.24
466_D	473_G	0.503	0.24
137_F	463_N	0.503	0.24
431_L	494_G	0.503	0.24
288_T	408_L	0.502	0.24
175_L	521_L	0.502	0.24
322_S	326_F	0.501	0.24
434_R	466_D	0.501	0.24
223_V	227_E	0.500	0.24
319_L	330_K	0.500	0.24
404_H	408_L	0.500	0.24

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1w25A	2	0.7047	100	0.61	Contact Map
3ezuA	2	0.5233	100	0.636	Contact Map
4h54A	2	0.456	100	0.647	Contact Map
4j40A	2	0	100	0.647	Contact Map
3pjxA	1	0.2919	100	0.658	Contact Map
4rnhA	2	0.2608	100	0.662	Contact Map
3breA	4	0.475	100	0.667	Contact Map
3ignA	1	0.2694	100	0.671	Contact Map
3mtkA	2	0.2642	100	0.672	Contact Map
3i5cA	2	0.3161	100	0.672	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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