GREMLIN Database
PPS - Putative phosphoenolpyruvate synthase
UniProt: O34309 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 866 (810)
Sequences: 997 (751)
Seq/√Len: 26.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
779_A848_I9.9821.00
197_D205_V9.4011.00
285_I306_I8.8741.00
776_E855_R8.6841.00
814_G856_V6.7131.00
298_C307_V5.9811.00
795_I814_G5.9581.00
779_A854_I5.4881.00
193_L282_G5.2631.00
344_P705_Y5.0901.00
776_E853_R4.9631.00
281_I306_I4.6091.00
838_V856_V4.3651.00
710_E728_R4.3181.00
23_G180_I4.3121.00
28_E288_H4.0671.00
299_L304_F3.8621.00
285_I295_I3.8481.00
209_D227_C3.8061.00
114_A137_L3.7771.00
230_V275_I3.6791.00
238_K272_D3.6621.00
271_T274_Q3.5871.00
193_L278_L3.5311.00
104_L113_Y3.5081.00
848_I854_I3.3401.00
189_A269_T3.3271.00
187_P298_C3.3231.00
210_A269_T3.3031.00
195_T282_G3.1791.00
778_R853_R3.1491.00
698_H722_Y3.1331.00
857_H860_E3.1081.00
459_S462_D3.1071.00
293_Q309_S2.9741.00
50_K95_D2.9371.00
818_E841_V2.9171.00
855_R864_E2.8891.00
188_Q300_A2.8351.00
703_I711_L2.8231.00
794_D850_D2.7991.00
780_R794_D2.7210.99
774_V855_R2.6880.99
211_G218_L2.6750.99
289_F309_S2.6620.99
24_L28_E2.6490.99
193_L206_L2.5770.99
784_N787_D2.5570.99
211_G217_A2.5470.99
689_E700_K2.5320.99
838_V863_I2.4970.99
138_N214_L2.4950.99
779_A816_V2.4600.99
39_E183_R2.4450.99
19_V42_C2.4290.99
208_I275_I2.3950.99
212_F243_K2.3710.99
686_K690_Q2.3040.98
43_V100_V2.2640.98
793_G813_K2.2600.98
196_A312_I2.2570.98
196_A203_R2.2390.98
775_I814_G2.2270.98
55_N90_V2.2180.98
185_V298_C2.1780.97
379_R382_F2.1680.97
92_I146_L2.1460.97
41_F181_V2.1250.97
161_A165_R2.1240.97
808_L812_I2.1110.97
232_D286_E2.0980.97
354_T673_M2.0350.96
815_L826_G2.0170.96
81_R85_Q2.0150.96
533_V568_T1.9930.96
85_Q89_E1.9790.95
812_I815_L1.9640.95
363_G366_F1.9560.95
781_V850_D1.9500.95
490_A493_A1.9230.95
107_F113_Y1.9170.94
80_S162_V1.9020.94
148_H151_K1.8940.94
115_V139_I1.8820.94
551_K554_N1.8780.94
579_Y671_Y1.8670.94
192_I211_G1.8570.93
366_F370_T1.8560.93
814_G848_I1.8500.93
586_E670_K1.8430.93
279_A704_Y1.8340.93
282_G295_I1.8250.93
798_T812_I1.8230.93
778_R794_D1.8210.93
285_I309_S1.7920.92
588_D821_G1.7840.92
141_G144_A1.7810.92
849_K852_Q1.7630.92
537_I568_T1.7610.91
342_I347_L1.7600.91
33_Q36_Q1.7500.91
48_Y157_F1.7490.91
22_K26_L1.7330.91
50_K55_N1.7180.90
196_A315_L1.7170.90
96_V101_A1.7160.90
705_Y729_K1.7010.90
117_S128_S1.6930.90
104_L107_F1.6930.90
545_D549_H1.6880.90
588_D826_G1.6870.90
120_T175_V1.6810.89
523_T526_M1.6810.89
268_Q275_I1.6790.89
468_L712_H1.6650.89
135_T312_I1.6650.89
586_E839_V1.6600.89
427_P431_E1.6570.89
838_V858_G1.6530.89
20_G26_L1.6430.88
778_R795_I1.6380.88
301_R701_E1.6180.88
216_E220_S1.6170.87
225_A821_G1.6090.87
774_V857_H1.6070.87
246_A260_I1.5920.87
136_Y151_K1.5890.87
132_Q829_I1.5870.86
816_V854_I1.5770.86
228_F275_I1.5760.86
363_G368_D1.5740.86
851_G861_G1.5650.86
226_D243_K1.5640.86
346_G523_T1.5620.86
96_V99_A1.5520.85
670_K674_V1.5470.85
546_Y550_V1.5450.85
841_V863_I1.5430.85
346_G588_D1.5430.85
136_Y148_H1.5170.84
386_M389_H1.5150.84
277_Q302_D1.5080.83
21_G26_L1.5020.83
121_A124_L1.4950.83
670_K839_V1.4890.83
404_R407_I1.4830.82
49_Q176_Y1.4810.82
670_K802_D1.4760.82
94_S97_V1.4690.82
525_E529_A1.4680.82
46_V49_Q1.4650.82
100_V105_S1.4580.81
138_N249_G1.4550.81
133_Q161_A1.4490.81
816_V863_I1.4470.81
198_P831_R1.4410.81
795_I854_I1.4390.80
124_L133_Q1.4290.80
670_K803_P1.4290.80
816_V848_I1.4250.80
137_L214_L1.4190.80
663_S814_G1.4080.79
134_D160_R1.4050.79
277_Q303_T1.3910.78
582_R586_E1.3820.78
776_E864_E1.3750.77
281_I285_I1.3660.77
626_Q630_K1.3590.76
247_I257_T1.3590.76
824_T827_A1.3550.76
785_M812_I1.3520.76
816_V856_V1.3490.76
190_S298_C1.3470.76
191_G832_E1.3450.76
596_E685_L1.3440.76
285_I289_F1.3380.75
211_G247_I1.3370.75
424_A589_I1.3290.75
23_G30_S1.3280.75
586_E593_R1.3260.75
362_G366_F1.3260.75
225_A228_F1.3250.75
261_D264_Q1.3250.75
594_W821_G1.3230.74
706_L728_R1.3100.74
22_K38_P1.3080.74
60_V92_I1.3060.73
543_V568_T1.3030.73
60_V94_S1.2990.73
575_Y594_W1.2990.73
272_D312_I1.2990.73
54_Q94_S1.2960.73
775_I848_I1.2940.73
582_R839_V1.2840.72
51_A90_V1.2830.72
336_Q346_G1.2830.72
144_A147_Q1.2810.72
824_T828_V1.2810.72
128_S832_E1.2750.72
190_S266_K1.2650.71
331_S334_H1.2650.71
23_G26_L1.2650.71
147_Q151_K1.2600.71
588_D670_K1.2580.71
692_I700_K1.2580.71
579_Y808_L1.2550.70
384_K389_H1.2520.70
230_V279_A1.2500.70
99_A729_K1.2470.70
351_L355_V1.2460.70
632_E653_K1.2460.70
671_Y803_P1.2370.69
218_L225_A1.2330.69
28_E31_K1.2330.69
529_A578_K1.2320.69
779_A796_L1.2320.69
20_G38_P1.2290.69
186_F865_I1.2290.69
295_I306_I1.2280.69
338_M824_T1.2210.68
773_G861_G1.2200.68
54_Q86_I1.2170.68
238_K268_Q1.2110.68
226_D270_L1.2110.68
235_I275_I1.2100.68
329_Y526_M1.2100.68
334_H587_I1.2090.67
670_K770_V1.2090.67
252_E258_Q1.2080.67
713_E717_T1.2070.67
831_R861_G1.2040.67
843_N847_L1.2040.67
181_V781_V1.2030.67
108_G141_G1.1960.67
195_T278_L1.1910.66
563_D567_K1.1910.66
818_E843_N1.1780.65
405_D410_I1.1770.65
60_V252_E1.1740.65
337_M587_I1.1740.65
23_G42_C1.1700.65
111_H183_R1.1680.65
19_V89_E1.1660.65
333_G667_E1.1630.64
801_T805_W1.1580.64
501_M505_L1.1560.64
87_I697_I1.1550.64
31_K52_I1.1510.64
132_Q315_L1.1490.63
688_A701_E1.1470.63
727_T731_E1.1470.63
99_A102_Q1.1440.63
553_D783_L1.1430.63
59_Q94_S1.1410.63
359_R368_D1.1400.63
780_R791_E1.1360.63
807_P829_I1.1310.62
22_K37_V1.1290.62
780_R850_D1.1260.62
586_E667_E1.1260.62
461_S578_K1.1240.62
117_S191_G1.1230.62
825_H832_E1.1200.61
91_D269_T1.1200.61
625_R629_L1.1200.61
177_L814_G1.1190.61
525_E528_L1.1180.61
331_S336_Q1.1150.61
802_D818_E1.1130.61
330_I386_M1.1120.61
330_I393_L1.1100.61
43_V99_A1.1090.61
542_E693_E1.1080.61
526_M828_V1.1070.61
342_I354_T1.1070.61
19_V44_T1.1010.60
806_T812_I1.1010.60
83_I86_I1.0990.60
90_V241_A1.0950.60
198_P576_L1.0930.60
165_R293_Q1.0910.59
36_Q50_K1.0900.59
346_G590_T1.0870.59
100_V695_G1.0860.59
802_D839_V1.0860.59
542_E774_V1.0850.59
336_Q824_T1.0840.59
351_L356_A1.0790.58
804_S814_G1.0790.58
805_W861_G1.0770.58
20_G23_G1.0770.58
333_G670_K1.0740.58
406_F411_P1.0730.58
337_M588_D1.0680.58
24_L27_G1.0660.58
733_T736_E1.0630.57
370_T519_P1.0620.57
119_A133_Q1.0600.57
779_A797_V1.0590.57
339_T346_G1.0560.57
83_I89_E1.0560.57
104_L108_G1.0520.57
341_P590_T1.0510.56
50_K96_V1.0500.56
523_T671_Y1.0480.56
19_V27_G1.0440.56
235_I238_K1.0440.56
86_I693_E1.0430.56
568_T572_I1.0420.56
20_G37_V1.0400.56
50_K82_K1.0380.56
101_A145_I1.0350.55
22_K29_L1.0340.55
821_G826_G1.0340.55
121_A133_Q1.0320.55
195_T206_L1.0300.55
809_F832_E1.0300.55
191_G221_G1.0290.55
247_I255_T1.0280.55
278_L285_I1.0270.55
767_G861_G1.0270.55
169_G834_G1.0250.55
804_S818_E1.0220.54
407_I411_P1.0210.54
112_A140_T1.0190.54
43_V96_V1.0190.54
92_I96_V1.0170.54
49_Q52_I1.0170.54
779_A814_G1.0170.54
349_F448_I1.0140.54
183_R697_I1.0130.54
128_S802_D1.0100.53
800_F817_T1.0090.53
364_R368_D1.0060.53
347_L354_T1.0050.53
858_G861_G1.0040.53
278_L304_F1.0030.53
119_A156_L1.0030.53
336_Q339_T1.0010.53
39_E59_Q0.9990.53
667_E670_K0.9960.52
775_I795_I0.9940.52
54_Q88_M0.9940.52
135_T766_V0.9900.52
343_K590_T0.9900.52
442_E445_Q0.9900.52
219_V801_T0.9880.52
119_A315_L0.9880.52
785_M798_T0.9870.52
51_A60_V0.9860.52
181_V758_E0.9860.52
691_L696_V0.9840.52
248_Y258_Q0.9830.51
351_L354_T0.9830.51
121_A196_A0.9820.51
790_L794_D0.9820.51
215_G219_V0.9810.51
190_S400_I0.9800.51
172_H195_T0.9780.51
765_I841_V0.9770.51
452_K467_I0.9770.51
202_N835_L0.9760.51
797_V848_I0.9740.51
689_E693_E0.9740.51
26_L38_P0.9710.51
128_S191_G0.9710.51
522_I526_M0.9710.51
135_T307_V0.9700.50
807_P826_G0.9680.50
180_I184_M0.9660.50
123_D130_A0.9650.50
342_I673_M0.9650.50
136_Y711_L0.9640.50
274_Q299_L0.9630.50
104_L145_I0.9570.49
53_E60_V0.9560.49
123_D131_G0.9560.49
246_A264_Q0.9550.49
781_V785_M0.9550.49
594_W827_A0.9550.49
135_T247_I0.9530.49
526_M670_K0.9510.49
20_G29_L0.9510.49
124_L170_F0.9490.49
521_N526_M0.9480.49
49_Q54_Q0.9480.49
586_E674_V0.9470.49
550_V558_E0.9450.49
135_T304_F0.9410.48
97_V101_A0.9390.48
684_L708_F0.9380.48
348_S707_T0.9360.48
443_S446_T0.9350.48
277_Q304_F0.9340.48
243_K265_Q0.9330.48
181_V421_R0.9330.48
51_A93_P0.9330.48
122_E130_A0.9310.48
120_T124_L0.9290.47
662_F671_Y0.9280.47
527_G531_L0.9270.47
55_N87_I0.9250.47
818_E842_E0.9250.47
555_F606_L0.9240.47
47_G96_V0.9230.47
187_P215_G0.9230.47
122_E131_G0.9220.47
89_E94_S0.9220.47
681_K685_L0.9220.47
355_V673_M0.9200.47
178_S192_I0.9190.47
154_A312_I0.9170.47
526_M587_I0.9120.46
51_A257_T0.9110.46
673_M821_G0.9100.46
688_A692_I0.9080.46
537_I609_I0.9070.46
824_T840_G0.9070.46
80_S159_D0.9060.46
699_E787_D0.9050.46
670_K823_M0.9040.46
697_I814_G0.9040.46
300_A305_Y0.9020.45
587_I677_Y0.9020.45
773_G805_W0.9000.45
213_G773_G0.9000.45
337_M354_T0.8990.45
111_H181_V0.8980.45
521_N587_I0.8970.45
197_D297_W0.8960.45
126_H285_I0.8960.45
133_Q165_R0.8950.45
831_R851_G0.8950.45
169_G303_T0.8950.45
114_A185_V0.8950.45
333_G586_E0.8950.45
583_C670_K0.8930.45
196_A200_T0.8920.45
333_G338_M0.8920.45
588_D593_R0.8910.45
796_L834_G0.8880.44
628_A632_E0.8880.44
143_D146_L0.8880.44
51_A89_E0.8860.44
330_I369_V0.8860.44
235_I241_A0.8840.44
303_T814_G0.8840.44
278_L282_G0.8840.44
221_G832_E0.8840.44
137_L216_E0.8840.44
466_F469_E0.8830.44
138_N216_E0.8790.44
535_D601_L0.8780.44
210_A226_D0.8770.44
129_F215_G0.8770.44
378_S382_F0.8770.44
86_I96_V0.8760.44
52_I82_K0.8750.43
448_I714_V0.8720.43
135_T331_S0.8720.43
702_D803_P0.8710.43
88_M151_K0.8710.43
152_C806_T0.8710.43
333_G336_Q0.8690.43
354_T678_F0.8680.43
496_W651_E0.8660.43
36_Q89_E0.8660.43
197_D229_K0.8650.43
241_A247_I0.8640.43
53_E59_Q0.8630.43
191_G297_W0.8630.43
526_M806_T0.8620.42
814_G854_I0.8610.42
334_H338_M0.8600.42
241_A244_K0.8580.42
228_F269_T0.8570.42
36_Q281_I0.8560.42
47_G88_M0.8550.42
39_E89_E0.8550.42
726_S730_D0.8530.42
138_N217_A0.8520.42
338_M770_V0.8520.42
228_F268_Q0.8520.42
19_V178_S0.8510.42
812_I829_I0.8510.42
46_V50_K0.8500.42
515_S824_T0.8500.42
373_L821_G0.8500.42
343_K564_G0.8500.42
769_P865_I0.8490.42
139_I177_L0.8480.41
124_L806_T0.8480.41
107_F629_L0.8470.41
702_D725_I0.8440.41
631_K634_E0.8440.41
60_V100_V0.8420.41
333_G839_V0.8410.41
596_E798_T0.8410.41
23_G133_Q0.8410.41
275_I279_A0.8410.41
41_F103_Y0.8410.41
339_T800_F0.8400.41
454_N696_V0.8380.41
795_I806_T0.8370.41
437_V440_L0.8350.41
587_I674_V0.8340.40
732_Y735_Y0.8340.40
144_A426_M0.8340.40
236_I239_R0.8340.40
168_N729_K0.8340.40
383_L386_M0.8330.40
26_L117_S0.8330.40
97_V237_D0.8330.40
437_V534_A0.8310.40
805_W831_R0.8310.40
164_Y801_T0.8290.40
101_A142_V0.8290.40
685_L700_K0.8280.40
52_I239_R0.8280.40
588_D665_F0.8280.40
697_I787_D0.8270.40
138_N192_I0.8260.40
237_D247_I0.8260.40
100_V443_S0.8230.40
152_C691_L0.8230.40
218_L824_T0.8230.40
59_Q102_Q0.8230.40
329_Y670_K0.8230.40
95_D307_V0.8220.40
207_S229_K0.8200.39
277_Q299_L0.8200.39
29_L311_P0.8160.39
189_A274_Q0.8140.39
323_D327_H0.8140.39
195_T667_E0.8140.39
463_L504_W0.8110.39
785_M817_T0.8110.39
240_I243_K0.8110.39
670_K804_S0.8100.39
40_G826_G0.8090.39
288_H506_G0.8080.39
286_E292_P0.8080.39
498_N605_I0.8070.39
117_S832_E0.8070.39
292_P797_V0.8050.38
181_V303_T0.8050.38
157_F165_R0.8040.38
306_I606_L0.8040.38
286_E314_T0.8030.38
350_F587_I0.8030.38
261_D265_Q0.8010.38
347_L440_L0.8010.38
773_G831_R0.7990.38
275_I535_D0.7990.38
337_M826_G0.7990.38
192_I218_L0.7990.38
285_I358_M0.7970.38
792_D813_K0.7970.38
141_G148_H0.7960.38
252_E256_E0.7960.38
803_P840_G0.7960.38
114_A215_G0.7950.38
91_D99_A0.7940.38
313_T831_R0.7940.38
577_S711_L0.7940.38
449_E577_S0.7940.38
181_V302_D0.7920.37
629_L633_Q0.7910.37
49_Q94_S0.7910.37
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49_Q174_Q0.5200.21
803_P808_L0.5200.21
147_Q150_S0.5200.21
344_P725_I0.5200.21
571_A574_D0.5200.21
265_Q268_Q0.5190.21
100_V163_I0.5190.21
388_Q391_Q0.5190.21
577_S595_S0.5180.21
346_G823_M0.5180.21
59_Q79_I0.5180.21
346_G664_G0.5170.21
257_T261_D0.5170.21
342_I346_G0.5160.21
167_Q782_I0.5160.21
575_Y815_L0.5160.21
527_G806_T0.5160.21
277_Q657_D0.5160.21
129_F156_L0.5150.21
190_S804_S0.5150.21
85_Q236_I0.5140.21
537_I605_I0.5140.21
530_L830_A0.5140.21
39_E107_F0.5130.21
330_I336_Q0.5130.21
82_K173_S0.5130.21
316_F336_Q0.5130.21
681_K861_G0.5130.21
54_Q106_Q0.5130.21
185_V193_L0.5120.21
336_Q345_L0.5120.21
46_V252_E0.5120.21
705_Y725_I0.5120.21
283_R684_L0.5110.21
26_L832_E0.5110.21
698_H725_I0.5110.21
298_C824_T0.5110.21
339_T366_F0.5110.21
702_D705_Y0.5110.21
100_V149_I0.5100.21
520_H563_D0.5100.21
146_L781_V0.5100.21
181_V762_A0.5100.21
263_D438_S0.5090.21
521_N839_V0.5090.21
206_L279_A0.5090.21
671_Y677_Y0.5080.20
769_P799_S0.5080.20
124_L639_L0.5080.20
798_T818_E0.5080.20
379_R593_R0.5080.20
582_R670_K0.5070.20
135_T551_K0.5070.20
606_L609_I0.5070.20
285_I841_V0.5060.20
334_H821_G0.5060.20
343_K704_Y0.5050.20
195_T816_V0.5050.20
89_E630_K0.5040.20
144_A759_N0.5030.20
523_T819_V0.5030.20
171_D723_Q0.5030.20
670_K678_F0.5030.20
257_T572_I0.5020.20
386_M399_T0.5020.20
209_D826_G0.5020.20
533_V857_H0.5020.20
802_D841_V0.5020.20
368_D373_L0.5010.20
353_T589_I0.5000.20
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2olsA 2 0.4434 100 0.538 Contact Map
1vbgA 2 0.4861 100 0.65 Contact Map
2x0sA 2 0.5115 100 0.653 Contact Map
1kblA 2 0.4919 100 0.675 Contact Map
2e28A 3 0.6305 99.9 0.896 Contact Map
3t05A 3 0.6328 99.9 0.896 Contact Map
1zymA 2 0.261 99.9 0.898 Contact Map
2hwgA 2 0.2494 99.9 0.905 Contact Map
2wqdA 2 0.2494 99.9 0.908 Contact Map
2hi6A 1 0.1166 98.2 0.962 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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