TUAE - BACSU - GREMLIN Contacts

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TUAE - Teichuronic acid biosynthesis protein TuaE

UniProt:	O32270	Sequences: MSIKRSAVHTLALLAAAIFGVVLLLGAIHKDIGFMQMAAVLAVLAIGLFLLTLATAFTTKERLFMAVIYILIACTFLNNAFFAIHLGFFSLFLYRLLLIAAGCLHIFGMVRNRTHIERWHGLQVKGILLFFAFWFIYGLVSLLWAKSVTVGLKYLALLAMGIFFIYLIVMYVQKMERLMIVYAIWLVMTVFLMIIGFYNHITHHHLASSTLYSGPEYKQHYPTSVFFNQNDFATFLSISFFFYITMMKNIKNGYIKAIGLVLSLCALYLIFATGSRASLLGIFAGIAVYIFIVLPPVLKRMAIWLSAAGIALFAVLFASKIYSKFWELFLAPQTLHSFHDRLPSNVARANLLKNAWHFFLDSYGFGVGAGNVSYYLEHYAVYDTDNVAEVHNWLVEILANFGLFIMLGYLSVYAYLIWVLYKFYERKLENQSKLITEGLITAMVSFLVSSISPSSVSNLFFHWVFMALVIAAVNVLRRSRQMPEPMYR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	488 (384)
Sequences:	6767 (6187)
Seq/√Len:	315.7

ECOLI - RFAL
BACSU - TUAE
HALSA - Q9HSV6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
359_F	398_L	5.418	1.00
362_S	367_V	4.921	1.00
401_F	405_I	4.613	1.00
367_V	371_N	4.568	1.00
221_Y	229_Q	3.916	1.00
230_N	275_S	3.598	1.00
324_K	328_L	3.591	1.00
396_E	400_N	3.541	1.00
137_Y	408_G	3.350	1.00
398_L	406_M	3.304	1.00
233_A	278_S	3.071	1.00
241_F	285_G	3.005	1.00
392_N	395_V	2.915	1.00
414_A	418_W	2.742	1.00
397_I	409_Y	2.729	1.00
355_A	395_V	2.613	1.00
355_A	390_V	2.602	1.00
240_F	263_S	2.593	1.00
352_L	395_V	2.574	1.00
299_K	302_A	2.534	1.00
192_L	224_S	2.504	1.00
356_W	360_L	2.452	1.00
360_L	363_Y	2.332	1.00
361_D	379_Y	2.319	1.00
145_A	151_G	2.313	1.00
404_F	408_G	2.311	1.00
367_V	399_A	2.306	1.00
189_T	239_S	2.232	1.00
393_W	450_S	2.210	1.00
358_F	367_V	2.136	1.00
365_F	404_F	2.133	1.00
196_G	232_F	2.099	1.00
406_M	410_L	2.098	1.00
355_A	359_F	2.097	1.00
130_F	408_G	2.044	1.00
179_M	183_A	2.040	1.00
359_F	363_Y	2.022	1.00
130_F	411_S	2.007	1.00
226_F	235_F	1.993	1.00
228_N	453_P	1.982	1.00
137_Y	141_S	1.950	1.00
277_A	452_S	1.931	1.00
237_S	445_S	1.929	1.00
274_G	279_L	1.923	1.00
230_N	278_S	1.898	1.00
137_Y	404_F	1.895	1.00
389_E	453_P	1.844	1.00
404_F	407_L	1.841	1.00
186_L	243_Y	1.795	1.00
230_N	391_H	1.779	1.00
165_I	169_V	1.777	1.00
418_W	422_K	1.767	1.00
390_V	396_E	1.765	1.00
369_A	401_F	1.762	1.00
394_L	447_L	1.739	1.00
355_A	399_A	1.735	1.00
128_L	165_I	1.735	1.00
285_G	441_T	1.732	1.00
173_Q	177_R	1.729	1.00
129_L	133_F	1.728	1.00
247_M	263_S	1.682	1.00
449_S	453_P	1.667	1.00
359_F	403_L	1.643	1.00
357_H	360_L	1.642	1.00
189_T	266_A	1.631	1.00
351_L	391_H	1.611	1.00
240_F	270_I	1.608	1.00
141_S	145_A	1.597	1.00
281_G	285_G	1.584	1.00
236_L	273_T	1.582	1.00
394_L	451_I	1.565	1.00
76_F	79_N	1.559	1.00
358_F	361_D	1.558	1.00
236_L	266_A	1.556	1.00
232_F	273_T	1.523	1.00
359_F	399_A	1.519	1.00
92_F	95_R	1.479	1.00
438_G	442_A	1.468	1.00
358_F	399_A	1.461	1.00
260_L	264_L	1.453	1.00
243_Y	262_L	1.442	1.00
145_A	371_N	1.434	1.00
138_G	401_F	1.430	1.00
241_F	442_A	1.423	1.00
190_V	262_L	1.422	1.00
174_K	177_R	1.416	1.00
245_T	438_G	1.416	1.00
237_S	285_G	1.412	1.00
184_I	188_M	1.379	1.00
175_M	179_M	1.376	1.00
420_L	469_V	1.350	1.00
180_I	184_I	1.348	1.00
228_N	391_H	1.347	1.00
232_F	236_L	1.345	1.00
141_S	144_W	1.342	1.00
328_L	337_S	1.316	1.00
133_F	137_Y	1.316	1.00
370_G	400_N	1.312	1.00
270_I	282_I	1.310	1.00
99_I	103_C	1.307	1.00
137_Y	365_F	1.298	1.00
253_G	256_K	1.278	1.00
449_S	454_S	1.276	1.00
277_A	281_G	1.261	1.00
252_N	255_I	1.259	1.00
449_S	452_S	1.258	1.00
133_F	408_G	1.256	1.00
233_A	273_T	1.250	1.00
242_F	438_G	1.246	1.00
285_G	445_S	1.243	1.00
240_F	282_I	1.241	1.00
194_I	198_Y	1.240	1.00
284_A	448_V	1.237	1.00
232_F	269_L	1.232	1.00
199_N	224_S	1.231	1.00
69_Y	73_A	1.223	1.00
398_L	401_F	1.215	1.00
389_E	454_S	1.213	1.00
262_L	266_A	1.212	1.00
230_N	233_A	1.209	1.00
281_G	448_V	1.208	1.00
356_W	359_F	1.202	1.00
221_Y	275_S	1.200	1.00
222_P	269_L	1.172	1.00
454_S	457_S	1.171	1.00
239_S	266_A	1.167	1.00
311_A	314_A	1.158	1.00
193_M	269_L	1.156	1.00
389_E	396_E	1.146	1.00
348_R	391_H	1.143	1.00
352_L	392_N	1.143	1.00
392_N	451_I	1.143	1.00
257_A	261_V	1.141	1.00
277_A	453_P	1.139	1.00
395_V	398_L	1.135	1.00
288_V	441_T	1.133	1.00
355_A	398_L	1.130	1.00
390_V	399_A	1.130	1.00
309_G	313_F	1.128	1.00
98_L	102_G	1.126	1.00
192_L	225_V	1.125	1.00
362_S	365_F	1.121	1.00
439_L	442_A	1.120	1.00
351_L	390_V	1.119	1.00
407_L	411_S	1.116	1.00
347_A	351_L	1.114	1.00
139_L	155_L	1.108	1.00
397_I	406_M	1.106	1.00
132_A	136_I	1.105	1.00
75_T	79_N	1.103	1.00
134_W	401_F	1.099	1.00
349_A	353_K	1.097	1.00
125_K	128_L	1.095	1.00
300_R	303_I	1.092	1.00
372_V	400_N	1.086	1.00
459_L	463_W	1.079	1.00
134_W	138_G	1.078	1.00
183_A	187_V	1.078	1.00
467_A	471_A	1.077	1.00
398_L	404_F	1.071	1.00
419_V	422_K	1.068	1.00
257_A	260_L	1.068	1.00
268_Y	272_A	1.066	1.00
240_F	266_A	1.061	1.00
359_F	406_M	1.061	1.00
411_S	415_Y	1.061	1.00
353_K	357_H	1.060	1.00
471_A	474_N	1.059	1.00
176_E	180_I	1.049	1.00
372_V	390_V	1.048	1.00
238_I	241_F	1.048	1.00
246_M	259_G	1.043	1.00
397_I	401_F	1.039	1.00
462_H	466_M	1.035	1.00
243_Y	266_A	1.034	1.00
137_Y	144_W	1.026	1.00
277_A	454_S	1.024	1.00
199_N	222_P	1.024	1.00
130_F	412_V	1.023	1.00
89_F	92_F	1.018	1.00
224_S	232_F	1.014	1.00
372_V	376_L	1.014	1.00
247_M	259_G	1.004	1.00
123_Q	126_G	1.003	1.00
233_A	237_S	1.002	1.00
134_W	397_I	1.000	1.00
182_Y	242_F	0.996	1.00
396_E	454_S	0.991	1.00
368_G	400_N	0.991	1.00
460_F	463_W	0.989	1.00
165_I	168_I	0.988	1.00
351_L	355_A	0.988	1.00
422_K	426_R	0.984	1.00
354_N	357_H	0.981	1.00
394_L	406_M	0.975	1.00
193_M	266_A	0.973	1.00
357_H	361_D	0.971	1.00
231_D	389_E	0.971	1.00
276_R	345_N	0.971	1.00
264_L	268_Y	0.967	1.00
359_F	404_F	0.967	1.00
168_I	467_A	0.965	1.00
308_A	315_V	0.964	1.00
354_N	358_F	0.962	1.00
234_T	449_S	0.961	1.00
420_L	439_L	0.960	1.00
138_G	141_S	0.959	1.00
128_L	169_V	0.954	1.00
415_Y	418_W	0.952	1.00
355_A	372_V	0.950	1.00
358_F	376_L	0.947	1.00
448_V	452_S	0.946	1.00
166_Y	170_M	0.945	1.00
124_V	128_L	0.943	1.00
316_L	320_K	0.931	1.00
313_F	317_F	0.930	1.00
346_V	349_A	0.930	1.00
345_N	352_L	0.928	1.00
344_S	349_A	0.928	1.00
350_N	353_K	0.924	1.00
364_G	403_L	0.918	1.00
241_F	445_S	0.918	1.00
289_Y	441_T	0.917	1.00
230_N	453_P	0.914	1.00
105_H	109_M	0.913	1.00
72_I	79_N	0.913	1.00
196_G	199_N	0.908	1.00
196_G	224_S	0.903	1.00
142_L	151_G	0.903	1.00
141_S	369_A	0.901	1.00
344_S	351_L	0.900	1.00
131_F	412_V	0.899	1.00
371_N	400_N	0.899	1.00
316_L	319_S	0.896	1.00
277_A	280_L	0.895	1.00
74_C	79_N	0.894	1.00
412_V	416_L	0.889	1.00
394_L	398_L	0.887	1.00
270_I	278_S	0.887	1.00
440_I	444_V	0.887	1.00
228_N	231_D	0.886	1.00
72_I	75_T	0.886	1.00
185_W	239_S	0.884	1.00
317_F	320_K	0.884	1.00
286_I	290_I	0.883	1.00
177_R	180_I	0.882	1.00
196_G	225_V	0.882	1.00
237_S	241_F	0.879	1.00
180_I	183_A	0.877	1.00
198_Y	202_T	0.872	1.00
355_A	391_H	0.871	1.00
311_A	315_V	0.866	1.00
342_L	346_V	0.866	1.00
218_K	221_Y	0.865	1.00
147_S	150_V	0.865	1.00
358_F	372_V	0.864	1.00
97_L	101_A	0.864	1.00
307_A	311_A	0.863	1.00
130_F	133_F	0.860	1.00
144_W	365_F	0.859	1.00
182_Y	246_M	0.856	1.00
122_L	125_K	0.856	1.00
199_N	223_T	0.854	1.00
183_A	259_G	0.854	1.00
352_L	390_V	0.851	1.00
186_L	246_M	0.850	1.00
250_I	259_G	0.850	1.00
128_L	132_A	0.849	1.00
242_F	246_M	0.849	1.00
398_L	405_I	0.847	1.00
266_A	269_L	0.845	1.00
245_T	249_N	0.843	1.00
126_G	130_F	0.843	1.00
277_A	449_S	0.840	1.00
275_S	278_S	0.839	1.00
228_N	396_E	0.838	1.00
247_M	260_L	0.838	1.00
463_W	467_A	0.838	1.00
410_L	414_A	0.834	1.00
193_M	262_L	0.833	1.00
136_I	139_L	0.833	1.00
390_V	454_S	0.827	1.00
190_V	194_I	0.826	1.00
394_L	409_Y	0.822	1.00
267_L	282_I	0.821	1.00
437_E	441_T	0.816	1.00
317_F	321_I	0.816	1.00
187_V	191_F	0.815	1.00
352_L	391_H	0.814	1.00
322_Y	328_L	0.814	1.00
196_G	269_L	0.813	1.00
394_L	410_L	0.811	1.00
193_M	222_P	0.809	1.00
243_Y	263_S	0.807	1.00
154_Y	157_L	0.801	1.00
221_Y	273_T	0.800	1.00
168_I	171_Y	0.797	1.00
122_L	126_G	0.795	1.00
237_S	278_S	0.795	1.00
466_M	470_I	0.791	1.00
289_Y	293_V	0.781	1.00
309_G	316_L	0.781	1.00
130_F	415_Y	0.780	1.00
453_P	456_V	0.779	1.00
423_F	436_T	0.778	1.00
190_V	265_C	0.777	1.00
358_F	362_S	0.776	1.00
288_V	292_I	0.776	1.00
343_P	347_A	0.773	1.00
435_I	438_G	0.771	0.99
283_F	287_A	0.769	0.99
103_C	107_F	0.765	0.99
244_I	263_S	0.764	0.99
258_I	262_L	0.764	0.99
344_S	347_A	0.760	0.99
94_Y	97_L	0.760	0.99
315_V	319_S	0.759	0.99
183_A	246_M	0.757	0.99
237_S	282_I	0.756	0.99
400_N	457_S	0.752	0.99
193_M	265_C	0.751	0.99
280_L	283_F	0.750	0.99
197_F	265_C	0.747	0.99
389_E	400_N	0.745	0.99
105_H	108_G	0.741	0.99
445_S	449_S	0.741	0.99
196_G	222_P	0.741	0.99
199_N	391_H	0.741	0.99
231_D	453_P	0.741	0.99
186_L	189_T	0.740	0.99
395_V	399_A	0.738	0.99
162_I	166_Y	0.738	0.99
256_K	259_G	0.737	0.99
182_Y	186_L	0.737	0.99
345_N	349_A	0.736	0.99
288_V	444_V	0.734	0.99
230_N	449_S	0.733	0.99
449_S	455_S	0.733	0.99
248_K	289_Y	0.732	0.99
421_Y	425_E	0.732	0.99
393_W	397_I	0.732	0.99
390_V	393_W	0.729	0.99
197_F	269_L	0.729	0.99
323_S	327_E	0.724	0.99
193_M	197_F	0.724	0.99
127_I	130_F	0.723	0.99
391_H	396_E	0.722	0.99
143_L	146_K	0.722	0.99
70_I	74_C	0.719	0.99
108_G	111_R	0.717	0.99
349_A	352_L	0.715	0.99
394_L	413_Y	0.714	0.99
240_F	243_Y	0.712	0.99
454_S	458_N	0.712	0.99
359_F	405_I	0.712	0.99
367_V	400_N	0.712	0.99
421_Y	424_Y	0.711	0.99
450_S	453_P	0.709	0.99
206_L	210_T	0.708	0.99
335_L	338_F	0.707	0.99
228_N	392_N	0.703	0.99
229_Q	233_A	0.702	0.99
204_H	208_S	0.701	0.99
307_A	314_A	0.700	0.99
352_L	389_E	0.699	0.99
95_R	98_L	0.698	0.99
362_S	399_A	0.698	0.99
352_L	454_S	0.689	0.99
101_A	105_H	0.688	0.99
229_Q	273_T	0.687	0.99
160_M	163_F	0.686	0.99
160_M	164_F	0.682	0.99
190_V	266_A	0.680	0.99
421_Y	440_I	0.674	0.99
156_A	160_M	0.673	0.99
275_S	348_R	0.671	0.99
222_P	272_A	0.670	0.99
415_Y	419_V	0.669	0.99
276_R	344_S	0.667	0.99
91_L	94_Y	0.666	0.99
298_L	302_A	0.666	0.99
394_L	450_S	0.664	0.98
108_G	112_N	0.662	0.98
241_F	438_G	0.661	0.98
186_L	266_A	0.660	0.98
156_A	159_A	0.659	0.98
106_I	110_V	0.659	0.98
247_M	257_A	0.658	0.98
228_N	454_S	0.658	0.98
65_M	69_Y	0.657	0.98
234_T	455_S	0.653	0.98
97_L	100_A	0.653	0.98
270_I	273_T	0.652	0.98
193_M	236_L	0.650	0.98
197_F	201_I	0.650	0.98
355_A	358_F	0.650	0.98
220_H	391_H	0.649	0.98
229_Q	275_S	0.648	0.98
294_L	299_K	0.647	0.98
241_F	245_T	0.647	0.98
228_N	449_S	0.643	0.98
359_F	395_V	0.642	0.98
368_G	372_V	0.641	0.98
73_A	79_N	0.639	0.98
73_A	76_F	0.637	0.98
303_I	306_S	0.637	0.98
347_A	352_L	0.637	0.98
409_Y	450_S	0.637	0.98
223_T	226_F	0.635	0.98
306_S	310_I	0.634	0.98
449_S	458_N	0.634	0.98
361_D	367_V	0.633	0.98
145_A	148_V	0.633	0.98
358_F	379_Y	0.633	0.98
298_L	301_M	0.632	0.98
109_M	113_R	0.632	0.98
127_I	415_Y	0.627	0.98
372_V	399_A	0.624	0.98
281_G	445_S	0.624	0.98
157_L	160_M	0.623	0.98
354_N	376_L	0.623	0.98
393_W	409_Y	0.623	0.98
74_C	77_L	0.622	0.98
156_A	163_F	0.622	0.98
141_S	401_F	0.621	0.98
153_K	157_L	0.620	0.98
95_R	99_I	0.619	0.98
75_T	78_N	0.614	0.97
417_I	444_V	0.611	0.97
167_L	171_Y	0.611	0.97
281_G	449_S	0.611	0.97
342_L	345_N	0.611	0.97
351_L	399_A	0.610	0.97
142_L	145_A	0.610	0.97
176_E	183_A	0.609	0.97
452_S	456_V	0.608	0.97
363_Y	398_L	0.605	0.97
290_I	294_L	0.603	0.97
356_W	398_L	0.602	0.97
276_R	452_S	0.601	0.97
96_L	104_L	0.599	0.97
138_G	158_L	0.598	0.97
372_V	375_Y	0.597	0.97
245_T	248_K	0.596	0.97
222_P	229_Q	0.594	0.97
367_V	375_Y	0.593	0.97
360_L	403_L	0.592	0.97
391_H	453_P	0.592	0.97
148_V	151_G	0.592	0.97
231_D	351_L	0.592	0.97
356_W	395_V	0.591	0.97
107_F	110_V	0.590	0.97
91_L	95_R	0.590	0.97
276_R	328_L	0.589	0.97
346_V	457_S	0.589	0.97
179_M	246_M	0.588	0.97
233_A	270_I	0.587	0.97
287_A	291_F	0.586	0.97
314_A	318_A	0.585	0.97
370_G	373_S	0.585	0.97
420_L	440_I	0.582	0.97
188_M	192_L	0.582	0.97
419_V	423_F	0.579	0.96
245_T	434_L	0.579	0.96
237_S	449_S	0.578	0.96
88_F	92_F	0.578	0.96
312_L	315_V	0.578	0.96
323_S	326_W	0.577	0.96
312_L	316_L	0.576	0.96
123_Q	128_L	0.575	0.96
146_K	151_G	0.575	0.96
324_K	327_E	0.575	0.96
67_V	79_N	0.574	0.96
243_Y	259_G	0.574	0.96
165_I	467_A	0.573	0.96
319_S	324_K	0.570	0.96
127_I	412_V	0.569	0.96
322_Y	326_W	0.569	0.96
168_I	172_V	0.568	0.96
375_Y	379_Y	0.568	0.96
66_A	69_Y	0.567	0.96
224_S	235_F	0.567	0.96
234_T	453_P	0.566	0.96
67_V	78_N	0.566	0.96
69_Y	72_I	0.566	0.96
236_L	270_I	0.565	0.96
105_H	170_M	0.563	0.96
176_E	179_M	0.562	0.96
222_P	225_V	0.562	0.96
231_D	394_L	0.561	0.96
369_A	400_N	0.559	0.96
285_G	292_I	0.559	0.96
252_N	256_K	0.559	0.96
189_T	269_L	0.557	0.96
140_V	144_W	0.557	0.96
236_L	269_L	0.557	0.96
393_W	455_S	0.557	0.96
228_N	275_S	0.556	0.96
319_S	322_Y	0.555	0.95
165_I	171_Y	0.555	0.95
413_Y	447_L	0.554	0.95
100_A	104_L	0.553	0.95
393_W	457_S	0.553	0.95
90_S	94_Y	0.552	0.95
308_A	311_A	0.552	0.95
459_L	465_F	0.550	0.95
243_Y	246_M	0.550	0.95
363_Y	367_V	0.547	0.95
375_Y	378_H	0.546	0.95
88_F	91_L	0.545	0.95
240_F	244_I	0.545	0.95
389_E	392_N	0.544	0.95
422_K	425_E	0.544	0.95
263_S	267_L	0.544	0.95
135_F	159_A	0.544	0.95
192_L	232_F	0.542	0.95
398_L	403_L	0.542	0.95
230_N	277_A	0.541	0.95
68_I	76_F	0.539	0.95
351_L	395_V	0.539	0.95
144_W	369_A	0.539	0.95
277_A	355_A	0.538	0.95
138_G	144_W	0.538	0.95
228_N	393_W	0.537	0.95
138_G	142_L	0.537	0.95
207_A	210_T	0.535	0.95
396_E	456_V	0.534	0.94
230_N	348_R	0.534	0.94
124_V	132_A	0.534	0.94
250_I	256_K	0.533	0.94
313_F	316_L	0.533	0.94
396_E	457_S	0.533	0.94
228_N	389_E	0.532	0.94
230_N	457_S	0.532	0.94
233_A	454_S	0.531	0.94
304_W	307_A	0.528	0.94
228_N	351_L	0.528	0.94
275_S	393_W	0.527	0.94
393_W	454_S	0.527	0.94
98_L	101_A	0.527	0.94
351_L	392_N	0.526	0.94
377_E	380_A	0.526	0.94
228_N	274_G	0.525	0.94
364_G	404_F	0.524	0.94
424_Y	433_K	0.524	0.94
456_V	459_L	0.524	0.94
280_L	345_N	0.524	0.94
66_A	70_I	0.523	0.94
261_V	265_C	0.523	0.94
102_G	106_I	0.522	0.94
68_I	75_T	0.521	0.94
281_G	441_T	0.519	0.94
363_Y	399_A	0.519	0.94
267_L	271_F	0.518	0.94
403_L	407_L	0.517	0.93
411_S	414_A	0.515	0.93
65_M	73_A	0.515	0.93
244_I	289_Y	0.515	0.93
110_V	113_R	0.515	0.93
161_G	169_V	0.515	0.93
391_H	394_L	0.513	0.93
373_S	391_H	0.512	0.93
359_F	362_S	0.511	0.93
96_L	100_A	0.511	0.93
227_F	232_F	0.510	0.93
215_P	218_K	0.510	0.93
195_I	224_S	0.509	0.93
133_F	325_F	0.508	0.93
74_C	78_N	0.507	0.93
459_L	462_H	0.506	0.93
226_F	230_N	0.503	0.93
319_S	323_S	0.502	0.92
413_Y	417_I	0.501	0.92
96_L	103_C	0.501	0.92
389_E	455_S	0.500	0.92
343_P	346_V	0.500	0.92

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2rddB	1	0.0717	10.4	0.957	Contact Map
4pgrA	1	0.3934	4.4	0.964	Contact Map
3wxwA	1	0.2398	3.8	0.965	Contact Map
4qncA	2	0.1598	3.5	0.966	Contact Map
2ks1B	1	0.0902	3.4	0.966	Contact Map
3hd7A	1	0.0717	2.9	0.967	Contact Map
2l2tA	2	0.0902	2.9	0.967	Contact Map
4x5mA	2	0.1803	2.8	0.967	Contact Map
1m56D	1	0.0697	2.5	0.968	Contact Map
2m20A	2	0.084	2.2	0.969	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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