GREMLIN Database
YVAC - Uncharacterized membrane protein YvaC
UniProt: O32225 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 631 (553)
Sequences: 2596 (2026)
Seq/√Len: 86.2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
194_S269_R5.1091.00
583_L587_F4.1761.00
300_E304_V3.8801.00
298_F304_V3.7131.00
354_A373_A3.6661.00
108_G348_G3.5621.00
350_V373_A3.0551.00
164_G168_I2.8901.00
149_L152_A2.8651.00
108_G352_F2.8561.00
264_I268_L2.8121.00
105_A109_L2.8111.00
37_A165_I2.7891.00
519_E523_R2.7561.00
418_F422_A2.7441.00
213_R216_R2.7431.00
300_E305_L2.6841.00
112_A348_G2.6721.00
305_L308_A2.6561.00
297_L305_L2.6151.00
186_Y189_L2.6041.00
239_L245_I2.5441.00
368_W396_T2.5241.00
248_A251_H2.4671.00
328_Y331_R2.4641.00
153_G157_L2.4441.00
41_P161_F2.4411.00
304_V308_A2.4111.00
489_S535_K2.4111.00
35_G421_A2.3891.00
112_A341_L2.3531.00
350_V480_G2.2791.00
423_L444_A2.2781.00
301_I305_L2.2751.00
368_W466_R2.2391.00
369_I469_D2.2361.00
350_V476_I2.1981.00
247_I251_H2.1941.00
357_F476_I2.1041.00
291_S300_E2.0861.00
473_G477_G2.0851.00
267_A271_T2.0841.00
397_V401_I1.9891.00
576_S579_E1.9881.00
369_I472_V1.9781.00
354_A476_I1.9521.00
248_A252_F1.9441.00
292_E305_L1.9331.00
388_R435_Y1.9251.00
31_A425_C1.9231.00
207_Q211_M1.9221.00
575_F579_E1.9081.00
575_F578_E1.8991.00
365_R368_W1.8981.00
372_S470_V1.8941.00
302_N305_L1.8931.00
301_I307_I1.8851.00
573_A576_S1.8821.00
111_G351_L1.8811.00
258_D266_K1.8791.00
300_E307_I1.8771.00
244_D247_I1.8721.00
244_D253_S1.8461.00
121_L124_Q1.8431.00
291_S298_F1.8231.00
294_R301_I1.8221.00
556_Q559_G1.8091.00
41_P54_G1.8011.00
300_E308_A1.7971.00
239_L243_D1.7881.00
259_R262_A1.7661.00
293_P297_L1.7561.00
243_D247_I1.7531.00
107_L135_F1.7491.00
590_A594_F1.7461.00
368_W443_T1.7441.00
87_A156_F1.7411.00
261_T265_E1.7381.00
235_F238_L1.7161.00
258_D261_T1.7151.00
472_V475_V1.7151.00
205_Q209_V1.7051.00
217_Q221_G1.7031.00
293_P296_K1.6671.00
277_N280_V1.6591.00
298_F301_I1.6441.00
526_L530_R1.6341.00
279_R282_N1.6181.00
343_R380_T1.6121.00
212_L215_A1.6061.00
191_A295_R1.6031.00
396_T470_V1.6031.00
244_D248_A1.6001.00
298_F305_L1.5871.00
275_L282_N1.5721.00
243_D246_F1.5691.00
400_V463_M1.5471.00
233_E239_L1.5451.00
505_G584_R1.5431.00
259_R263_Q1.5271.00
272_G281_F1.5221.00
275_L279_R1.5211.00
187_H276_A1.5201.00
195_A204_A1.5111.00
79_L163_M1.5011.00
238_L241_K1.4991.00
244_D252_F1.4960.99
83_S159_G1.4930.99
368_W473_G1.4850.99
294_R303_E1.4710.99
471_A475_V1.4710.99
252_F256_T1.4690.99
158_G162_A1.4650.99
229_S234_R1.4600.99
209_V213_R1.4390.99
412_G415_Y1.4340.99
268_L272_G1.4340.99
265_E272_G1.4310.99
70_E74_K1.4310.99
251_H256_T1.4300.99
101_W105_A1.4300.99
324_P327_F1.4250.99
327_F331_R1.4200.99
115_M119_S1.4180.99
557_H561_Y1.4160.99
583_L586_F1.4110.99
246_F250_I1.4100.99
228_K231_H1.4090.99
253_S256_T1.4060.99
556_Q561_Y1.4020.99
190_A272_G1.4020.99
265_E268_L1.4010.99
376_V435_Y1.4000.99
331_R334_F1.3960.99
563_L566_Q1.3910.99
236_F240_E1.3900.99
396_T443_T1.3890.99
41_P45_G1.3740.99
296_K299_E1.3730.99
115_M347_Y1.3700.99
147_Q151_R1.3680.99
298_F302_N1.3660.99
395_G466_R1.3630.99
322_R325_S1.3610.99
569_R572_S1.3550.99
265_E269_R1.3530.99
247_I255_E1.3460.99
246_F251_H1.3450.99
588_E591_E1.3420.99
357_F472_V1.3410.99
530_R556_Q1.3350.99
248_A256_T1.3350.99
446_A450_T1.3280.99
268_L275_L1.3250.99
380_T489_S1.3220.99
208_T218_T1.3170.99
107_L110_I1.3150.99
36_F479_L1.3130.99
392_R435_Y1.3120.99
342_I485_W1.3110.99
245_I251_H1.3110.99
236_F242_A1.3070.99
398_I440_P1.3050.99
270_Q280_V1.3050.99
291_S305_L1.3040.99
504_E555_A1.3020.99
96_L106_V1.3000.99
369_I372_S1.2960.99
291_S294_R1.2950.99
252_F255_E1.2940.99
438_A442_L1.2920.99
209_V221_G1.2920.99
245_I253_S1.2870.98
290_E302_N1.2850.98
297_L302_N1.2810.98
293_P300_E1.2790.98
409_F415_Y1.2760.98
40_F161_F1.2750.98
290_E300_E1.2750.98
136_L139_S1.2670.98
164_G167_L1.2630.98
271_T275_L1.2590.98
209_V212_L1.2530.98
269_R272_G1.2510.98
246_F253_S1.2490.98
248_A254_A1.2480.98
584_R588_E1.2390.98
417_A421_A1.2320.98
267_A270_Q1.2300.98
242_A251_H1.2250.98
208_T215_A1.2230.98
246_F252_F1.2220.98
95_L99_M1.2170.98
550_P554_G1.2160.98
297_L301_I1.2100.98
183_Q187_H1.2020.98
290_E298_F1.1970.98
294_R298_F1.1950.97
524_V528_R1.1930.97
355_D370_P1.1900.97
402_L440_P1.1860.97
297_L300_E1.1820.97
291_S295_R1.1810.97
296_K307_I1.1800.97
226_R232_D1.1740.97
222_K225_R1.1700.97
129_M133_L1.1700.97
260_E265_E1.1690.97
502_R591_E1.1690.97
299_E302_N1.1640.97
264_I275_L1.1630.97
556_Q562_L1.1610.97
297_L307_I1.1590.97
350_V389_A1.1580.97
351_L374_A1.1560.97
366_S370_P1.1560.97
201_F212_L1.1540.97
274_M281_F1.1530.97
415_Y418_F1.1510.97
346_K368_W1.1480.97
555_A559_G1.1470.97
435_Y439_V1.1450.97
520_H523_R1.1430.97
439_V442_L1.1380.97
156_F160_I1.1370.97
30_K33_G1.1370.97
327_F330_L1.1360.97
148_A152_A1.1360.97
576_S580_I1.1340.97
369_I476_I1.1330.97
549_W552_I1.1320.97
246_F255_E1.1310.97
82_V127_A1.1300.96
377_M396_T1.1290.96
123_I126_P1.1220.96
260_E264_I1.1220.96
245_I248_A1.1210.96
295_R305_L1.1170.96
275_L281_F1.1150.96
204_A207_Q1.1140.96
263_Q267_A1.1140.96
243_D248_A1.1120.96
292_E298_F1.1100.96
104_A352_F1.1080.96
333_A336_W1.1070.96
302_N307_I1.1050.96
292_E297_L1.1030.96
259_R264_I1.1020.96
191_A204_A1.1000.96
242_A248_A1.1000.96
59_I134_A1.0970.96
296_K300_E1.0960.96
104_A107_L1.0890.96
545_A562_L1.0860.96
270_Q273_D1.0860.96
210_L215_A1.0860.96
420_I448_V1.0850.96
300_E303_E1.0840.96
248_A253_S1.0820.95
301_I304_V1.0810.95
356_M360_A1.0790.95
585_A589_Q1.0790.95
397_V467_L1.0750.95
251_H254_A1.0740.95
267_A272_G1.0740.95
243_D251_H1.0730.95
290_E299_E1.0700.95
466_R473_G1.0680.95
273_D276_A1.0680.95
266_K270_Q1.0670.95
59_I62_F1.0620.95
297_L304_V1.0610.95
106_V110_I1.0580.95
212_L219_V1.0580.95
60_G346_K1.0580.95
205_Q208_T1.0540.95
183_Q272_G1.0540.95
574_P577_D1.0530.95
261_T269_R1.0490.95
157_L299_E1.0460.95
297_L303_E1.0450.95
294_R306_Y1.0430.95
31_A34_S1.0410.94
179_G190_A1.0400.94
582_Q594_F1.0400.94
582_Q586_F1.0390.94
450_T462_F1.0330.94
400_V467_L1.0290.94
582_Q593_S1.0280.94
586_F589_Q1.0280.94
560_Y564_S1.0230.94
423_L441_F1.0230.94
101_W344_A1.0190.94
292_E296_K1.0190.94
587_F597_K1.0160.94
257_P260_E1.0140.94
546_D550_P1.0120.94
102_M405_A1.0090.93
251_H255_E1.0070.93
333_A338_S1.0060.93
372_S392_R1.0050.93
258_D264_I1.0000.93
260_E267_A1.0000.93
262_A275_L0.9990.93
217_Q220_L0.9920.93
228_K237_R0.9890.93
239_L248_A0.9880.93
229_S237_R0.9880.93
465_A469_D0.9870.93
83_S96_L0.9870.93
245_I250_I0.9840.93
303_E307_I0.9840.93
246_F249_I0.9840.93
72_Y170_W0.9830.93
550_P555_A0.9820.93
182_L261_T0.9810.92
107_L115_M0.9790.92
294_R300_E0.9780.92
290_E305_L0.9780.92
292_E300_E0.9770.92
381_T384_F0.9730.92
434_N440_P0.9720.92
218_T221_G0.9700.92
562_L565_A0.9700.92
556_Q563_L0.9680.92
238_L242_A0.9680.92
278_A281_F0.9680.92
79_L518_D0.9660.92
300_E306_Y0.9620.92
39_G421_A0.9610.92
428_E441_F0.9580.92
226_R238_L0.9530.91
560_Y563_L0.9520.91
193_L247_I0.9510.91
148_A151_R0.9510.91
200_G203_N0.9500.91
382_V540_F0.9500.91
208_T212_L0.9460.91
271_T282_N0.9460.91
578_E592_Q0.9450.91
49_G53_Y0.9450.91
293_P299_E0.9440.91
293_P303_E0.9430.91
212_L220_L0.9420.91
85_G89_S0.9420.91
292_E304_V0.9410.91
586_F593_S0.9400.91
523_R535_K0.9390.91
188_Q191_A0.9340.91
293_P305_L0.9340.91
338_S341_L0.9330.90
344_A348_G0.9320.90
247_I256_T0.9290.90
440_P443_T0.9280.90
460_G464_I0.9280.90
396_T466_R0.9280.90
48_A51_T0.9240.90
190_A471_A0.9200.90
377_M477_G0.9200.90
376_V473_G0.9160.90
443_T466_R0.9160.90
236_F241_K0.9140.90
247_I253_S0.9100.89
33_G171_L0.9100.89
190_A265_E0.9100.89
214_T218_T0.9080.89
250_I254_A0.9030.89
235_F245_I0.9010.89
261_T268_L0.9000.89
349_I480_G0.8990.89
58_S62_F0.8970.89
191_A292_E0.8930.88
263_Q278_A0.8900.88
36_F498_R0.8890.88
110_I135_F0.8880.88
479_L483_L0.8850.88
536_A554_G0.8840.88
293_P308_A0.8840.88
318_G494_P0.8820.88
261_T266_K0.8770.88
203_N213_R0.8760.87
110_I114_A0.8740.87
371_L421_A0.8730.87
389_A478_L0.8730.87
250_I253_S0.8720.87
146_S150_F0.8680.87
320_P327_F0.8670.87
212_L216_R0.8650.87
136_L141_L0.8620.87
577_D580_I0.8600.87
240_E246_F0.8590.86
49_G52_D0.8580.86
589_Q592_Q0.8570.86
290_E304_V0.8550.86
204_A213_R0.8510.86
357_F413_G0.8490.86
552_I556_Q0.8490.86
232_D236_F0.8490.86
207_Q213_R0.8470.86
554_G557_H0.8470.86
92_L106_V0.8450.86
294_R302_N0.8440.85
239_L242_A0.8440.85
201_F206_H0.8430.85
293_P304_V0.8430.85
502_R595_I0.8420.85
199_P210_L0.8420.85
435_Y473_G0.8410.85
555_A558_L0.8380.85
293_P298_F0.8370.85
295_R298_F0.8340.85
563_L567_A0.8330.85
574_P579_E0.8320.85
354_A369_I0.8310.85
508_M512_L0.8280.84
592_Q596_M0.8280.84
299_E306_Y0.8260.84
296_K302_N0.8260.84
272_G280_V0.8240.84
298_F306_Y0.8230.84
165_I168_I0.8220.84
258_D272_G0.8160.84
144_D150_F0.8150.83
295_R299_E0.8140.83
35_G39_G0.8140.83
148_A154_L0.8140.83
87_A152_A0.8130.83
342_I374_A0.8130.83
580_I584_R0.8130.83
556_Q566_Q0.8120.83
36_F139_S0.8090.83
558_L568_H0.8080.83
264_I267_A0.8080.83
263_Q281_F0.8060.83
40_F320_P0.8060.83
346_K474_S0.8060.83
277_N282_N0.8040.83
229_S236_F0.8030.83
579_E583_L0.8030.83
145_P559_G0.8020.82
509_E584_R0.8020.82
298_F303_E0.8010.82
233_E237_R0.8010.82
584_R592_Q0.8010.82
586_F590_A0.7990.82
103_M114_A0.7960.82
63_V137_V0.7960.82
320_P330_L0.7960.82
219_V224_N0.7940.82
193_L249_I0.7930.82
209_V216_R0.7920.82
52_D109_L0.7880.81
259_R268_L0.7880.81
289_N308_A0.7870.81
44_V48_A0.7870.81
580_I594_F0.7840.81
372_S382_V0.7840.81
191_A195_A0.7840.81
62_F66_Y0.7830.81
208_T211_M0.7770.80
358_A469_D0.7760.80
258_D262_A0.7750.80
270_Q552_I0.7730.80
291_S301_I0.7710.80
582_Q589_Q0.7690.80
353_A356_M0.7680.80
345_L401_I0.7680.80
211_M218_T0.7670.80
35_G425_C0.7640.79
419_C468_T0.7640.79
378_L388_R0.7620.79
83_S187_H0.7620.79
245_I256_T0.7610.79
585_A592_Q0.7610.79
588_E592_Q0.7580.79
113_A117_I0.7560.79
591_E595_I0.7560.79
367_Y470_V0.7560.79
250_I256_T0.7540.78
109_L113_A0.7520.78
530_R534_D0.7520.78
381_T428_E0.7520.78
202_H205_Q0.7510.78
273_D277_N0.7500.78
61_G158_G0.7480.78
414_V417_A0.7480.78
197_G298_F0.7480.78
592_Q595_I0.7470.78
573_A579_E0.7470.78
28_W63_V0.7460.78
446_A504_E0.7460.78
185_T189_L0.7460.78
348_G352_F0.7450.78
330_L478_L0.7440.77
382_V488_F0.7440.77
67_A79_L0.7440.77
503_L506_Q0.7430.77
342_I385_T0.7430.77
343_R383_V0.7400.77
274_M289_N0.7390.77
203_N206_H0.7380.77
83_S420_I0.7350.77
274_M279_R0.7320.76
262_A324_P0.7270.76
249_I253_S0.7260.76
61_G570_R0.7250.76
207_Q280_V0.7250.76
132_V136_L0.7250.76
302_N475_V0.7220.75
212_L239_L0.7220.75
260_E266_K0.7210.75
115_M122_G0.7200.75
589_Q596_M0.7190.75
343_R477_G0.7180.75
248_A255_E0.7160.75
146_S149_L0.7150.75
151_R154_L0.7130.74
199_P205_Q0.7120.74
338_S343_R0.7110.74
89_S93_G0.7100.74
299_E303_E0.7090.74
576_S584_R0.7090.74
262_A291_S0.7080.74
260_E278_A0.7060.74
430_L437_L0.7030.73
325_S330_L0.7020.73
274_M278_A0.7010.73
403_A473_G0.7010.73
220_L225_R0.6980.73
578_E586_F0.6980.73
230_R248_A0.6970.73
151_R159_G0.6970.73
533_Y541_P0.6970.73
218_T408_F0.6940.72
561_Y566_Q0.6940.72
580_I593_S0.6920.72
547_A557_H0.6920.72
589_Q597_K0.6910.72
271_T280_V0.6910.72
291_S303_E0.6900.72
189_L397_V0.6900.72
102_M106_V0.6870.72
263_Q268_L0.6840.71
230_R233_E0.6830.71
354_A508_M0.6830.71
365_R450_T0.6800.71
575_F585_A0.6790.71
132_V135_F0.6780.71
270_Q274_M0.6770.71
368_W469_D0.6770.71
289_N299_E0.6760.70
226_R231_H0.6750.70
275_L278_A0.6750.70
241_K245_I0.6750.70
231_H235_F0.6740.70
303_E353_A0.6740.70
559_G567_A0.6740.70
510_K513_T0.6730.70
492_R496_L0.6720.70
235_F241_K0.6720.70
227_K236_F0.6710.70
257_P264_I0.6700.70
303_E306_Y0.6680.70
564_S570_R0.6670.69
261_T272_G0.6670.69
560_Y566_Q0.6650.69
580_I587_F0.6640.69
31_A480_G0.6640.69
112_A119_S0.6640.69
559_G569_R0.6630.69
193_L383_V0.6620.69
415_Y419_C0.6620.69
203_N207_Q0.6620.69
405_A409_F0.6600.69
423_L427_L0.6600.69
229_S232_D0.6580.68
368_W450_T0.6570.68
92_L105_A0.6570.68
206_H210_L0.6550.68
207_Q401_I0.6540.68
298_F308_A0.6540.68
587_F592_Q0.6540.68
589_Q593_S0.6540.68
41_P44_V0.6530.68
41_P178_E0.6520.68
586_F597_K0.6510.68
344_A442_L0.6500.67
309_S319_E0.6490.67
176_G179_G0.6480.67
428_E565_A0.6440.67
388_R431_I0.6440.67
585_A588_E0.6430.67
257_P273_D0.6430.67
582_Q592_Q0.6430.67
182_L215_A0.6410.66
189_L246_F0.6400.66
234_R237_R0.6390.66
547_A550_P0.6390.66
389_A481_T0.6380.66
380_T507_F0.6380.66
590_A596_M0.6370.66
209_V215_A0.6350.66
394_A551_A0.6340.66
301_I306_Y0.6330.65
219_V222_K0.6320.65
403_A447_L0.6310.65
224_N228_K0.6300.65
270_Q275_L0.6300.65
406_I410_K0.6300.65
213_R220_L0.6270.65
94_T152_A0.6270.65
500_V555_A0.6270.65
265_E275_L0.6270.65
576_S585_A0.6270.65
199_P203_N0.6260.65
215_A223_G0.6260.65
189_L306_Y0.6250.64
385_T403_A0.6250.64
265_E278_A0.6250.64
488_F536_A0.6240.64
553_S557_H0.6240.64
525_S528_R0.6230.64
423_L467_L0.6230.64
203_N210_L0.6220.64
142_P149_L0.6220.64
302_N583_L0.6220.64
152_A487_R0.6220.64
428_E485_W0.6210.64
323_L329_F0.6210.64
49_G55_L0.6190.64
94_T151_R0.6190.64
269_R279_R0.6190.64
552_I563_L0.6190.64
295_R468_T0.6180.64
203_N277_N0.6180.64
112_A116_F0.6160.63
393_S474_S0.6160.63
66_Y427_L0.6140.63
271_T278_A0.6130.63
215_A218_T0.6130.63
102_M360_A0.6130.63
31_A429_M0.6120.63
500_V522_L0.6120.63
382_V470_V0.6120.63
156_F159_G0.6100.63
545_A556_Q0.6100.63
101_W345_L0.6090.62
378_L381_T0.6090.62
403_A431_I0.6090.62
334_F353_A0.6080.62
334_F338_S0.6080.62
584_R591_E0.6080.62
396_T452_S0.6070.62
59_I404_G0.6050.62
67_A130_F0.6030.62
71_S268_L0.6030.62
216_R236_F0.6030.62
290_E295_R0.6010.61
578_E596_M0.6010.61
376_V474_S0.6010.61
405_A475_V0.6000.61
345_L349_I0.5990.61
303_E308_A0.5970.61
445_N449_I0.5910.60
40_F101_W0.5910.60
212_L271_T0.5900.60
243_D252_F0.5900.60
249_I256_T0.5900.60
268_L271_T0.5900.60
591_E596_M0.5890.60
571_P583_L0.5850.59
257_P268_L0.5850.59
214_T236_F0.5840.59
275_L280_V0.5840.59
464_I468_T0.5830.59
260_E263_Q0.5820.59
391_Q434_N0.5810.59
268_L282_N0.5790.59
155_T158_G0.5790.59
238_L377_M0.5770.58
263_Q273_D0.5760.58
234_R238_L0.5750.58
576_S583_L0.5740.58
579_E591_E0.5730.58
545_A549_W0.5730.58
29_K33_G0.5730.58
273_D297_L0.5730.58
576_S587_F0.5730.58
372_S439_V0.5720.58
263_Q271_T0.5720.58
488_F540_F0.5720.58
204_A212_L0.5690.57
519_E525_S0.5690.57
191_A207_Q0.5690.57
190_A349_I0.5680.57
290_E297_L0.5680.57
431_I438_A0.5680.57
498_R505_G0.5680.57
216_R220_L0.5670.57
440_P446_A0.5670.57
153_G596_M0.5670.57
28_W404_G0.5660.57
89_S155_T0.5650.57
234_R240_E0.5650.57
372_S539_E0.5650.57
259_R280_V0.5650.57
119_S340_V0.5640.57
265_E274_M0.5640.57
156_F269_R0.5620.56
258_D273_D0.5620.56
257_P265_E0.5610.56
57_A60_G0.5600.56
360_A405_A0.5600.56
391_Q436_A0.5590.56
322_R330_L0.5590.56
150_F153_G0.5580.56
388_R392_R0.5570.56
341_L407_L0.5570.56
265_E282_N0.5570.56
460_G463_M0.5560.56
29_K173_N0.5530.55
35_G45_G0.5520.55
346_K484_L0.5520.55
164_G585_A0.5510.55
192_C246_F0.5510.55
564_S567_A0.5490.55
72_Y75_R0.5490.55
579_E586_F0.5490.55
204_A210_L0.5480.54
537_L541_P0.5480.54
579_E589_Q0.5450.54
235_F246_F0.5450.54
553_S560_Y0.5440.54
201_F422_A0.5430.54
470_V488_F0.5410.54
368_W477_G0.5410.54
244_D255_E0.5400.53
31_A35_G0.5400.53
390_I394_A0.5390.53
183_Q419_C0.5390.53
273_D280_V0.5390.53
33_G439_V0.5380.53
321_S326_S0.5380.53
282_N397_V0.5380.53
258_D265_E0.5370.53
260_E272_G0.5370.53
223_G226_R0.5360.53
206_H212_L0.5350.53
566_Q569_R0.5350.53
261_T274_M0.5340.53
346_K523_R0.5330.52
477_G481_T0.5330.52
28_W31_A0.5320.52
415_Y429_M0.5320.52
219_V223_G0.5320.52
503_L525_S0.5310.52
214_T219_V0.5310.52
263_Q274_M0.5300.52
490_T548_L0.5290.52
108_G459_A0.5290.52
244_D254_A0.5290.52
584_R590_A0.5290.52
556_Q560_Y0.5290.52
584_R593_S0.5280.52
135_F139_S0.5270.52
244_D249_I0.5270.52
166_A172_W0.5270.52
263_Q275_L0.5270.52
56_I60_G0.5260.52
320_P325_S0.5260.52
422_A471_A0.5260.52
560_Y567_A0.5250.51
554_G559_G0.5240.51
340_V378_L0.5240.51
112_A344_A0.5240.51
319_E325_S0.5240.51
121_L128_P0.5230.51
88_L109_L0.5230.51
387_H391_Q0.5230.51
462_F476_I0.5230.51
84_I88_L0.5220.51
296_K305_L0.5220.51
578_E582_Q0.5220.51
84_I156_F0.5220.51
370_P450_T0.5220.51
376_V400_V0.5220.51
271_T274_M0.5200.51
371_L439_V0.5200.51
63_V66_Y0.5190.51
290_E296_K0.5190.51
363_F407_L0.5190.51
249_I593_S0.5180.50
367_Y469_D0.5180.50
443_T450_T0.5180.50
292_E306_Y0.5180.50
384_F519_E0.5180.50
271_T406_I0.5170.50
165_I169_G0.5170.50
574_P594_F0.5170.50
213_R219_V0.5170.50
545_A550_P0.5150.50
209_V220_L0.5150.50
117_I362_G0.5150.50
370_P462_F0.5130.50
578_E588_E0.5130.50
126_P447_L0.5130.50
309_S356_M0.5120.50
103_M366_S0.5120.50
296_K303_E0.5120.50
294_R297_L0.5110.50
575_F580_I0.5110.50
124_Q140_G0.5110.50
502_R505_G0.5100.49
163_M405_A0.5090.49
200_G204_A0.5090.49
164_G268_L0.5090.49
328_Y353_A0.5080.49
326_S330_L0.5080.49
424_Q427_L0.5070.49
70_E73_K0.5070.49
181_V215_A0.5050.49
585_A590_A0.5050.49
327_F333_A0.5040.49
560_Y569_R0.5040.49
177_P346_K0.5020.48
532_A536_A0.5020.48
295_R302_N0.5020.48
119_S346_K0.5010.48
414_V426_L0.5000.48
194_S274_M0.5000.48
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3wdoA 1 0.3693 41.1 0.965 Contact Map
3effK 4 0.1997 16.6 0.972 Contact Map
4hw4A 2 0.0951 15.5 0.972 Contact Map
4n78F 1 0.1933 14 0.973 Contact Map
4mndA 2 0.2647 11.8 0.973 Contact Map
3s84A 2 0.206 10.3 0.974 Contact Map
2kmfA 1 0.1823 9.7 0.974 Contact Map
2ld6A 1 0.1965 8.9 0.975 Contact Map
4l6yA 2 0.2488 8.4 0.975 Contact Map
4aj51 2 0.1014 7.8 0.976 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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