GREMLIN Database
YVGJ - Lipoteichoic acid synthase-like YvgJ
UniProt: O32206 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 617 (522)
Sequences: 4517 (3756)
Seq/√Len: 164.4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
282_D517_P6.3021.00
270_F445_K6.0441.00
329_K358_D5.1921.00
531_H546_D4.2621.00
392_K454_E4.2501.00
270_F273_D4.0381.00
248_V464_F3.7021.00
520_G547_L3.3231.00
334_Y396_Q3.3151.00
246_I462_I3.3111.00
388_A450_K3.2371.00
284_F520_G3.1181.00
445_K449_K3.1171.00
245_V533_L3.0191.00
243_R459_N3.0131.00
245_V328_L3.0001.00
259_N268_T2.9081.00
250_L253_T2.8991.00
277_K452_K2.8951.00
266_E272_N2.8731.00
449_K452_K2.8521.00
244_N460_S2.7971.00
452_K457_Y2.7391.00
362_D365_D2.5051.00
246_I460_S2.4931.00
22_K25_V2.4081.00
41_E45_L2.4051.00
328_L533_L2.4021.00
23_T27_Y2.3431.00
244_N398_F2.3371.00
449_K453_D2.3091.00
268_T272_N2.2981.00
461_M503_I2.2701.00
457_Y504_H2.2331.00
23_T26_I2.2081.00
247_F399_Y2.1951.00
310_G314_F2.1761.00
446_H449_K2.1581.00
386_Q389_K2.1351.00
448_I462_I2.1111.00
261_K280_S2.0681.00
414_D417_D2.0521.00
451_L462_I2.0461.00
426_S431_N2.0431.00
388_A454_E2.0181.00
149_H153_R1.9881.00
22_K27_Y1.9851.00
134_L138_K1.9731.00
390_K393_S1.9141.00
311_A314_F1.8911.00
381_K446_H1.8791.00
23_T28_K1.8381.00
284_F501_F1.8181.00
415_E418_Q1.8021.00
259_N272_N1.7991.00
463_V503_I1.7961.00
248_V444_L1.7911.00
249_T297_E1.7891.00
505_I508_I1.7851.00
282_D515_T1.7831.00
241_K459_N1.7351.00
465_M522_Q1.7291.00
310_G313_F1.7291.00
165_T169_A1.7121.00
408_H467_D1.7111.00
85_N95_F1.7061.00
44_L48_P1.7041.00
324_M529_L1.6951.00
195_F200_T1.6861.00
14_F22_K1.6831.00
384_L404_T1.6711.00
381_K439_Y1.6701.00
136_A140_K1.6631.00
247_F463_V1.6591.00
347_N350_V1.6541.00
384_L388_A1.6441.00
501_F525_V1.6371.00
380_D384_L1.6331.00
123_I127_V1.6321.00
528_T548_L1.6301.00
303_S527_P1.6261.00
407_N436_T1.6251.00
338_F390_K1.6041.00
150_T153_R1.6021.00
447_F462_I1.5791.00
414_D439_Y1.5751.00
20_W23_T1.5721.00
387_S402_F1.5681.00
450_K453_D1.5591.00
26_I29_L1.5591.00
147_A150_T1.5561.00
221_I225_T1.5531.00
273_D445_K1.5501.00
457_Y462_I1.5491.00
302_N323_T1.5471.00
250_L440_E1.5421.00
259_N266_E1.5411.00
217_S220_A1.5391.00
19_M22_K1.5381.00
268_T271_M1.5341.00
30_G33_L1.5281.00
109_D113_S1.5201.00
388_A392_K1.5141.00
270_F448_I1.5051.00
466_G499_V1.4991.00
450_K454_E1.4931.00
278_S504_H1.4821.00
387_S391_L1.4671.00
151_I154_Y1.4641.00
398_F456_L1.4641.00
442_E446_H1.4631.00
250_L444_L1.4511.00
271_M444_L1.4511.00
327_S530_M1.4461.00
300_V465_M1.4441.00
22_K26_I1.4421.00
197_I200_T1.4341.00
160_G164_C1.4321.00
253_T440_E1.4301.00
336_A400_S1.4261.00
255_S498_R1.4141.00
245_V461_M1.4081.00
390_K394_L1.4051.00
149_H152_K1.3911.00
31_F34_Q1.3831.00
293_T296_S1.3831.00
24_Y28_K1.3791.00
199_D202_S1.3761.00
446_H450_K1.3631.00
257_V437_V1.3581.00
243_R461_M1.3511.00
384_L447_F1.3481.00
389_K393_S1.3471.00
250_L464_F1.3461.00
133_L137_R1.3411.00
244_N458_E1.3351.00
18_F22_K1.3341.00
349_D353_D1.3321.00
22_K28_K1.3321.00
190_I194_Q1.3321.00
494_V498_R1.3311.00
506_P509_T1.3311.00
270_F449_K1.3291.00
222_K226_E1.3271.00
336_A398_F1.3181.00
57_G60_L1.3151.00
15_S22_K1.3151.00
438_R442_E1.3131.00
442_E445_K1.3121.00
463_V529_L1.3091.00
273_D277_K1.3081.00
407_N437_V1.3081.00
265_K434_V1.3071.00
162_L166_L1.3041.00
175_K179_H1.3031.00
221_I224_Y1.2941.00
253_T437_V1.2841.00
461_M505_I1.2761.00
253_T257_V1.2711.00
308_L312_V1.2661.00
291_G295_D1.2621.00
254_Q469_Y1.2551.00
392_K450_K1.2501.00
443_A446_H1.2461.00
188_K193_F1.2451.00
247_F300_V1.2451.00
281_F501_F1.2381.00
285_Y498_R1.2361.00
179_H182_D1.2361.00
337_V403_I1.2321.00
16_I22_K1.2271.00
333_Y397_P1.2151.00
420_I438_R1.2151.00
309_S312_V1.2131.00
152_K156_A1.2111.00
41_E44_L1.2061.00
135_F139_T1.2061.00
458_E507_G1.2041.00
343_K349_D1.2031.00
236_K548_L1.1991.00
249_T300_V1.1971.00
308_L311_A1.1971.00
293_T403_I1.1951.00
274_L444_L1.1921.00
383_F402_F1.1891.00
245_V399_Y1.1851.00
465_M525_V1.1821.00
269_P441_D1.1811.00
245_V463_V1.1741.00
336_A394_L1.1731.00
414_D420_I1.1721.00
167_A171_V1.1701.00
54_P58_I1.1681.00
461_M529_L1.1631.00
15_S18_F1.1611.00
230_S234_Q1.1611.00
257_V434_V1.1601.00
417_D420_I1.1601.00
328_L530_M1.1551.00
338_F400_S1.1451.00
199_D203_Q1.1391.00
418_Q421_D1.1381.00
300_V525_V1.1361.00
283_H519_A1.1331.00
251_E467_D1.1311.00
385_E446_H1.1301.00
306_P309_S1.1291.00
530_M535_V1.1251.00
21_I25_V1.1241.00
18_F25_V1.1201.00
110_M113_S1.1151.00
246_I398_F1.1141.00
387_S400_S1.1111.00
279_Y548_L1.1101.00
278_S502_I1.1071.00
414_D418_Q1.1001.00
448_I452_K1.0981.00
191_G194_Q1.0971.00
230_S233_D1.0961.00
22_K29_L1.0931.00
44_L47_N1.0901.00
275_I280_S1.0901.00
16_I20_W1.0891.00
336_A359_R1.0831.00
17_L23_T1.0781.00
148_P151_I1.0770.99
19_M23_T1.0750.99
505_I509_T1.0750.99
218_I222_K1.0720.99
198_Y201_I1.0690.99
196_H199_D1.0670.99
279_Y514_E1.0660.99
16_I21_I1.0660.99
283_H498_R1.0620.99
279_Y516_I1.0610.99
157_A161_M1.0570.99
18_F26_I1.0570.99
270_F442_E1.0550.99
249_T465_M1.0540.99
248_V384_L1.0530.99
156_A163_L1.0490.99
18_F23_T1.0480.99
339_H348_R1.0460.99
247_F525_V1.0450.99
332_D397_P1.0420.99
249_T401_S1.0410.99
130_V138_K1.0340.99
407_N440_E1.0340.99
291_G294_S1.0280.99
444_L464_F1.0260.99
126_F129_L1.0240.99
337_V352_Y1.0210.99
527_P544_G1.0210.99
274_L448_I1.0180.99
448_I464_F1.0150.99
253_T271_M1.0130.99
334_Y359_R1.0120.99
20_W27_Y1.0110.99
414_D419_L1.0090.99
344_T349_D1.0030.99
15_S19_M1.0030.99
193_F199_D1.0010.99
46_V50_S0.9980.99
336_A390_K0.9980.99
256_F495_Q0.9970.99
150_T154_Y0.9970.99
287_Q299_I0.9970.99
18_F21_I0.9970.99
164_C168_L0.9950.99
253_T268_T0.9940.99
196_H201_I0.9930.99
17_L22_K0.9920.99
69_A73_I0.9890.99
333_Y533_L0.9880.99
343_K362_D0.9830.99
546_D549_S0.9830.99
109_D114_V0.9800.99
291_G296_S0.9760.99
325_Y357_I0.9720.99
111_G115_K0.9710.99
163_L167_A0.9710.99
394_L398_F0.9690.99
413_I420_I0.9630.99
287_Q521_G0.9620.99
391_L400_S0.9600.99
121_L129_L0.9600.99
210_K213_A0.9600.99
59_G63_K0.9540.99
41_E48_P0.9520.99
197_I201_I0.9440.99
45_L48_P0.9410.99
255_S280_S0.9390.99
322_H330_Q0.9370.99
464_F502_I0.9360.99
419_L438_R0.9350.99
160_G167_A0.9340.99
90_G122_F0.9330.99
17_L25_V0.9330.99
71_L74_A0.9300.99
386_Q390_K0.9290.99
490_P493_N0.9260.98
253_T464_F0.9200.98
219_T223_N0.9170.98
128_D131_F0.9160.98
306_P310_G0.9160.98
431_N435_T0.9150.98
198_Y202_S0.9140.98
218_I221_I0.9140.98
135_F138_K0.9110.98
334_Y394_L0.9070.98
250_L384_L0.9020.98
417_D421_D0.9020.98
76_L80_V0.9010.98
23_T29_L0.8970.98
494_V497_Q0.8960.98
242_G331_H0.8960.98
158_S162_L0.8910.98
132_L135_F0.8900.98
126_F130_V0.8900.98
384_L440_E0.8880.98
293_T297_E0.8850.98
30_G34_Q0.8830.98
16_I23_T0.8830.98
357_I401_S0.8830.98
17_L21_I0.8800.98
20_W26_I0.8800.98
223_N226_E0.8790.98
218_I224_Y0.8780.98
413_I418_Q0.8760.98
195_F199_D0.8740.98
290_Q295_D0.8730.98
167_A170_E0.8730.98
20_W24_Y0.8710.98
275_I502_I0.8710.98
21_I28_K0.8710.98
280_S515_T0.8690.98
166_L170_E0.8690.98
111_G114_V0.8680.98
222_K225_T0.8650.98
96_I258_L0.8640.98
381_K442_E0.8620.98
274_L502_I0.8600.98
85_N96_I0.8600.98
389_K392_K0.8580.97
251_E408_H0.8550.97
146_A150_T0.8550.97
43_M46_V0.8530.97
20_W29_L0.8520.97
24_Y27_Y0.8510.97
130_V134_L0.8510.97
413_I435_T0.8500.97
11_F14_F0.8490.97
416_K420_I0.8490.97
109_D115_K0.8480.97
382_E385_E0.8470.97
377_G405_L0.8430.97
123_I126_F0.8430.97
213_A218_I0.8430.97
451_L455_G0.8420.97
348_R352_Y0.8420.97
19_M26_I0.8420.97
433_Y437_V0.8410.97
244_N397_P0.8360.97
406_T436_T0.8350.97
271_M280_S0.8340.97
253_T258_L0.8330.97
469_Y472_S0.8330.97
45_L51_F0.8310.97
412_E432_R0.8300.97
266_E438_R0.8290.97
293_T408_H0.8290.97
179_H183_R0.8280.97
134_L137_R0.8270.97
218_I225_T0.8260.97
14_F19_M0.8240.97
327_S330_Q0.8230.97
347_N352_Y0.8230.97
243_R397_P0.8230.97
377_G380_D0.8210.97
120_P124_A0.8190.97
408_H468_H0.8190.97
246_I447_F0.8190.97
443_A447_F0.8180.97
216_D220_A0.8180.97
229_Y232_P0.8170.97
207_I212_F0.8170.97
220_A224_Y0.8120.97
84_S96_I0.8120.97
163_L166_L0.8120.97
231_K234_Q0.8120.97
219_T222_K0.8070.96
162_L165_T0.8070.96
189_S194_Q0.8060.96
271_M502_I0.8060.96
33_L37_T0.8030.96
451_L456_L0.8010.96
182_D185_M0.7930.96
13_C16_I0.7930.96
130_V135_F0.7910.96
14_F24_Y0.7910.96
15_S23_T0.7910.96
151_I165_T0.7900.96
290_Q296_S0.7890.96
302_N351_M0.7880.96
345_F348_R0.7880.96
267_I272_N0.7850.96
541_I546_D0.7840.96
15_S21_I0.7840.96
112_S115_K0.7830.96
500_P503_I0.7830.96
217_S222_K0.7820.96
201_I204_T0.7820.96
246_I391_L0.7800.96
273_D276_K0.7790.96
440_E443_A0.7780.96
312_V316_K0.7770.96
149_H161_M0.7730.95
28_K32_D0.7720.95
174_P177_L0.7720.95
272_N275_I0.7720.95
244_N461_M0.7710.95
182_D188_K0.7700.95
18_F24_Y0.7700.95
182_D193_F0.7680.95
190_I193_F0.7660.95
57_G61_F0.7640.95
499_V522_Q0.7640.95
286_Q290_Q0.7600.95
260_E267_I0.7580.95
138_K141_H0.7580.95
123_I131_F0.7570.95
385_E388_A0.7560.95
420_I435_T0.7550.95
342_H345_F0.7530.95
100_V103_Q0.7530.95
324_M526_R0.7520.95
158_S165_T0.7520.95
131_F137_R0.7520.95
402_F447_F0.7510.95
209_A212_F0.7510.95
334_Y358_D0.7510.95
27_Y30_G0.7490.95
49_L52_I0.7480.95
384_L443_A0.7480.95
12_L18_F0.7440.94
266_E269_P0.7440.94
201_I205_V0.7440.94
21_I29_L0.7430.94
269_P272_N0.7420.94
14_F18_F0.7410.94
13_C24_Y0.7410.94
349_D352_Y0.7400.94
254_Q433_Y0.7380.94
307_S310_G0.7370.94
21_I27_Y0.7370.94
270_F274_L0.7360.94
271_M437_V0.7340.94
328_L399_Y0.7340.94
151_I155_Y0.7340.94
189_S193_F0.7330.94
254_Q472_S0.7320.94
220_A223_N0.7300.94
34_Q37_T0.7270.94
212_F215_E0.7260.94
298_F302_N0.7260.94
13_C17_L0.7260.94
70_F74_A0.7250.94
292_K295_D0.7240.94
33_L38_L0.7240.94
11_F15_S0.7220.93
234_Q237_F0.7210.93
21_I26_I0.7210.93
249_T403_I0.7190.93
155_Y170_E0.7190.93
422_E427_S0.7190.93
24_Y29_L0.7180.93
352_Y360_F0.7160.93
444_L462_I0.7160.93
25_V31_F0.7150.93
391_L451_L0.7140.93
381_K385_E0.7140.93
404_T447_F0.7130.93
251_E407_N0.7130.93
259_N262_V0.7120.93
417_D442_E0.7120.93
313_F316_K0.7120.93
174_P180_S0.7120.93
275_I278_S0.7080.93
212_F217_S0.7060.93
53_L57_G0.7060.93
193_F197_I0.7050.93
18_F29_L0.7050.93
483_L486_D0.7020.92
310_G315_T0.6970.92
385_E450_K0.6970.92
208_S211_A0.6950.92
331_H535_V0.6950.92
201_I206_N0.6940.92
137_R141_H0.6920.92
17_L24_Y0.6920.92
274_L464_F0.6890.92
382_E386_Q0.6880.92
389_K450_K0.6870.92
253_T407_N0.6860.92
19_M24_Y0.6860.92
157_A165_T0.6850.92
189_S192_L0.6840.91
124_A127_V0.6830.91
422_E428_D0.6810.91
422_E429_L0.6810.91
310_G316_K0.6810.91
440_E522_Q0.6800.91
175_K181_F0.6790.91
15_S27_Y0.6790.91
247_F401_S0.6760.91
406_T439_Y0.6750.91
31_F35_I0.6750.91
379_K382_E0.6740.91
287_Q296_S0.6740.91
346_W352_Y0.6730.91
127_V132_L0.6710.91
361_F390_K0.6710.91
341_N345_F0.6690.91
233_D236_K0.6690.91
526_R530_M0.6670.90
156_A167_A0.6670.90
200_T204_T0.6670.90
109_D129_L0.6660.90
346_W351_M0.6650.90
162_L169_A0.6630.90
306_P312_V0.6630.90
513_P516_I0.6620.90
166_L171_V0.6620.90
123_I138_K0.6610.90
145_K155_Y0.6600.90
251_E404_T0.6590.90
244_N459_N0.6590.90
46_V57_G0.6580.90
243_R333_Y0.6580.90
137_R140_K0.6570.90
85_N196_H0.6550.90
128_D132_L0.6550.90
48_P61_F0.6550.90
335_S358_D0.6540.90
61_F64_E0.6530.89
41_E55_L0.6520.89
20_W28_K0.6520.89
267_I434_V0.6520.89
335_S403_I0.6510.89
334_Y529_L0.6510.89
263_N434_V0.6510.89
245_V333_Y0.6500.89
242_G397_P0.6500.89
444_L448_I0.6500.89
359_R362_D0.6500.89
258_L268_T0.6500.89
54_P57_G0.6490.89
399_Y529_L0.6480.89
28_K31_F0.6470.89
269_P274_L0.6470.89
134_L216_D0.6460.89
103_Q106_N0.6440.89
188_K191_G0.6430.89
526_R542_Q0.6400.89
218_I226_E0.6370.88
175_K180_S0.6370.88
325_Y335_S0.6360.88
544_G547_L0.6350.88
17_L20_W0.6350.88
371_G382_E0.6330.88
414_D421_D0.6320.88
515_T518_D0.6300.88
152_K163_L0.6300.88
161_M165_T0.6300.88
413_I417_D0.6290.88
216_D224_Y0.6280.88
501_F520_G0.6280.88
381_K417_D0.6270.87
247_F324_M0.6260.87
175_K178_A0.6250.87
217_S221_I0.6250.87
470_G496_L0.6240.87
193_F200_T0.6240.87
270_F441_D0.6240.87
23_T30_G0.6230.87
404_T440_E0.6220.87
501_F547_L0.6210.87
351_M355_F0.6200.87
61_F65_N0.6190.87
471_I496_L0.6180.87
299_I522_Q0.6170.87
85_N407_N0.6160.87
212_F218_I0.6160.87
192_L196_H0.6160.87
311_A315_T0.6140.86
181_F185_M0.6130.86
290_Q293_T0.6120.86
411_F470_G0.6110.86
45_L55_L0.6110.86
16_I19_M0.6080.86
186_L194_Q0.6080.86
329_K335_S0.6080.86
159_C163_L0.6070.86
350_V353_D0.6060.86
165_T170_E0.6040.86
131_F135_F0.6020.85
27_Y32_D0.6020.85
159_C171_V0.6020.85
290_Q294_S0.6010.85
31_F37_T0.6010.85
44_L56_F0.5990.85
32_D37_T0.5990.85
290_Q380_D0.5980.85
439_Y442_E0.5980.85
135_F140_K0.5970.85
152_K158_S0.5970.85
119_H123_I0.5950.85
166_L169_A0.5950.85
297_E348_R0.5950.85
518_D547_L0.5950.85
13_C21_I0.5950.85
41_E46_V0.5940.85
366_F386_Q0.5940.85
335_S399_Y0.5940.85
172_Q176_L0.5920.84
257_V430_L0.5920.84
252_S466_G0.5920.84
324_M530_M0.5910.84
262_V434_V0.5900.84
282_D516_I0.5900.84
541_I549_S0.5890.84
118_F121_L0.5890.84
186_L192_L0.5890.84
374_T379_K0.5880.84
340_A376_W0.5870.84
455_G458_E0.5860.84
357_I360_F0.5830.83
307_S315_T0.5820.83
238_G241_K0.5810.83
524_D544_G0.5800.83
338_F383_F0.5800.83
294_S297_E0.5800.83
517_P536_E0.5800.83
298_F312_V0.5790.83
410_P522_Q0.5780.83
284_F500_P0.5780.83
214_D218_I0.5780.83
131_F134_L0.5740.83
274_L278_S0.5740.83
268_T441_D0.5730.82
357_I399_Y0.5730.82
133_L136_A0.5730.82
109_D112_S0.5720.82
312_V315_T0.5720.82
279_Y505_I0.5710.82
14_F29_L0.5710.82
126_F132_L0.5700.82
509_T513_P0.5700.82
299_I302_N0.5690.82
164_C167_A0.5660.82
248_V462_I0.5660.82
284_F525_V0.5650.82
255_S261_K0.5650.82
417_D439_Y0.5650.82
342_H363_V0.5650.82
122_F126_F0.5650.82
391_L456_L0.5640.81
433_Y470_G0.5640.81
422_E426_S0.5640.81
34_Q38_L0.5640.81
156_A162_L0.5640.81
531_H549_S0.5630.81
123_I128_D0.5620.81
31_F36_D0.5620.81
16_I24_Y0.5610.81
18_F27_Y0.5590.81
539_G542_Q0.5590.81
150_T155_Y0.5560.80
121_L125_L0.5550.80
268_T437_V0.5550.80
13_C23_T0.5550.80
177_L180_S0.5540.80
115_K119_H0.5530.80
12_L17_L0.5520.80
197_I204_T0.5520.80
301_A399_Y0.5510.80
102_F106_N0.5510.80
129_L133_L0.5500.80
88_F295_D0.5500.80
139_T142_P0.5490.80
114_V117_L0.5480.80
433_Y469_Y0.5480.80
339_H346_W0.5470.79
111_G127_V0.5470.79
474_A484_G0.5460.79
345_F352_Y0.5460.79
247_F465_M0.5460.79
129_L136_A0.5450.79
156_A171_V0.5450.79
396_Q459_N0.5440.79
40_E47_N0.5430.79
16_I27_Y0.5430.79
341_N405_L0.5430.79
149_H159_C0.5420.79
153_R168_L0.5410.79
153_R159_C0.5410.79
43_M48_P0.5400.79
448_I457_Y0.5400.79
356_G359_R0.5390.78
251_E380_D0.5390.78
284_F287_Q0.5380.78
363_V366_F0.5370.78
176_L180_S0.5370.78
225_T229_Y0.5370.78
11_F27_Y0.5350.78
458_E506_P0.5330.78
433_Y436_T0.5320.78
194_Q201_I0.5310.77
194_Q197_I0.5300.77
20_W31_F0.5290.77
258_L261_K0.5290.77
464_F504_H0.5280.77
404_T443_A0.5280.77
43_M55_L0.5280.77
16_I26_I0.5270.77
47_N65_N0.5270.77
174_P181_F0.5270.77
40_E43_M0.5270.77
126_F140_K0.5270.77
88_F92_Y0.5270.77
328_L331_H0.5270.77
245_V529_L0.5260.77
62_L70_F0.5240.76
309_S313_F0.5240.76
154_Y157_A0.5230.76
299_I404_T0.5230.76
434_V438_R0.5230.76
74_A324_M0.5220.76
22_K31_F0.5220.76
12_L15_S0.5210.76
47_N50_S0.5200.76
154_Y164_C0.5200.76
340_A383_F0.5180.76
181_F184_E0.5160.75
373_S378_L0.5160.75
214_D221_I0.5150.75
527_P531_H0.5150.75
243_R509_T0.5140.75
482_F485_K0.5140.75
251_E468_H0.5140.75
56_F60_L0.5140.75
361_F365_D0.5130.75
184_E188_K0.5130.75
196_H200_T0.5120.75
14_F25_V0.5120.75
341_N406_T0.5120.75
55_L59_G0.5110.75
339_H405_L0.5110.75
260_E272_N0.5110.75
440_E444_L0.5110.75
14_F27_Y0.5080.74
252_S468_H0.5080.74
154_Y158_S0.5070.74
43_M47_N0.5060.74
211_A214_D0.5060.74
216_D219_T0.5050.74
238_G242_G0.5050.74
267_I271_M0.5040.74
14_F17_L0.5030.74
183_R186_L0.5030.74
407_N414_D0.5030.74
195_F198_Y0.5030.74
324_M399_Y0.5030.74
471_I474_A0.5020.73
89_Y92_Y0.5020.73
273_D452_K0.5020.73
459_N463_V0.5020.73
398_F458_E0.5010.73
44_L53_L0.5010.73
51_F55_L0.5010.73
256_F261_K0.5000.73
243_R505_I0.5000.73
118_F129_L0.5000.73
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2w8dA 1 0.6467 100 0.42 Contact Map
2w5qA 1 0.6483 100 0.425 Contact Map
4uorA 3 0.6321 100 0.435 Contact Map
4uopA 2 0.6337 100 0.438 Contact Map
4uplA 2 0.59 100 0.467 Contact Map
4upiA 2 0.5851 100 0.47 Contact Map
3ed4A 3 0.6094 100 0.471 Contact Map
4uphA 2 0.5835 100 0.471 Contact Map
2vqrA 3 0.5867 100 0.472 Contact Map
3b5qA 1 0.5802 100 0.473 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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